AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0905180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0905180 MtrunA17_Chr6g0453131 96.684 392 10 2 1 390 1 391 0.0 784
Msa0905180 MtrunA17_Chr8g0361731 50.495 404 177 11 1 390 1 395 8.44e-124 363
Msa0905180 MtrunA17_Chr5g0417001 48.000 425 152 20 1 390 1 391 5.27e-110 328
Msa0905180 MtrunA17_Chr2g0311651 56.842 190 70 5 1 179 3 191 1.57e-68 219
Msa0905180 MtrunA17_Chr2g0311661 44.718 284 113 10 1 270 3 256 4.20e-67 214
Msa0905180 MtrunA17_Chr5g0442771 56.983 179 65 3 7 174 1 178 6.27e-67 214
Msa0905180 MtrunA17_Chr4g0047841 52.910 189 67 6 15 185 15 199 8.70e-60 197
Msa0905180 MtrunA17_Chr2g0318101 53.293 167 74 4 14 177 14 179 2.59e-59 196
Msa0905180 MtrunA17_Chr7g0252971 54.706 170 63 5 14 175 7 170 7.08e-58 192
Msa0905180 MtrunA17_Chr4g0076731 53.374 163 64 3 13 175 52 202 1.87e-57 193
Msa0905180 MtrunA17_Chr2g0309891 54.321 162 64 4 15 175 6 158 3.64e-55 185
Msa0905180 MtrunA17_Chr2g0326361 49.721 179 83 3 17 194 16 188 4.29e-55 184
Msa0905180 MtrunA17_Chr5g0398971 45.128 195 95 2 9 201 1 185 1.48e-54 183
Msa0905180 MtrunA17_Chr5g0417791 49.714 175 81 4 14 188 2 169 3.33e-54 180
Msa0905180 MtrunA17_Chr3g0124761 49.162 179 76 4 15 187 7 176 9.78e-54 179
Msa0905180 MtrunA17_Chr8g0384721 50.877 171 64 4 14 178 6 162 1.00e-53 179
Msa0905180 MtrunA17_Chr3g0130731 51.205 166 72 3 14 179 6 162 9.49e-53 177
Msa0905180 MtrunA17_Chr4g0042561 50.282 177 81 4 7 183 1 170 1.61e-52 176
Msa0905180 MtrunA17_Chr6g0481091 49.412 170 75 3 15 183 6 165 2.24e-52 174
Msa0905180 MtrunA17_Chr2g0318081 52.147 163 67 3 15 177 16 167 2.96e-52 177
Msa0905180 MtrunA17_Chr5g0405211 46.286 175 80 4 17 189 10 172 4.83e-52 177
Msa0905180 MtrunA17_Chr7g0263931 51.205 166 70 4 15 177 11 168 1.11e-51 175
Msa0905180 MtrunA17_Chr3g0109821 50.000 166 73 3 15 179 6 162 2.01e-51 182
Msa0905180 MtrunA17_Chr4g0018391 47.619 168 74 4 9 174 1 156 2.33e-51 175
Msa0905180 MtrunA17_Chr8g0359921 52.147 163 69 3 15 177 14 167 5.91e-51 173
Msa0905180 MtrunA17_Chr5g0433781 50.303 165 71 3 15 178 6 160 6.87e-51 180
Msa0905180 MtrunA17_Chr4g0056541 45.198 177 81 4 9 183 1 163 1.22e-50 174
Msa0905180 MtrunA17_Chr8g0372121 46.341 164 74 4 17 178 8 159 1.53e-50 172
Msa0905180 MtrunA17_Chr4g0060931 49.390 164 74 3 14 177 16 170 3.42e-50 172
Msa0905180 MtrunA17_Chr4g0038751 47.541 183 78 5 16 195 16 183 4.54e-50 170
Msa0905180 MtrunA17_Chr2g0309331 45.029 171 81 3 17 185 12 171 4.84e-50 171
Msa0905180 MtrunA17_Chr5g0400461 49.102 167 66 4 15 174 6 160 3.59e-49 169
Msa0905180 MtrunA17_Chr2g0316971 51.807 166 67 4 15 177 23 178 4.45e-49 170
Msa0905180 MtrunA17_Chr8g0346001 42.703 185 99 4 1 181 1 182 4.74e-49 171
Msa0905180 MtrunA17_Chr4g0017921 50.000 162 66 4 17 176 10 158 5.61e-49 169
Msa0905180 MtrunA17_Chr3g0091921 47.594 187 84 5 15 201 16 188 9.39e-49 167
Msa0905180 MtrunA17_Chr6g0461661 47.514 181 81 6 1 176 1 172 2.03e-48 168
Msa0905180 MtrunA17_Chr6g0453451 51.235 162 70 4 14 175 19 171 4.17e-48 166
Msa0905180 MtrunA17_Chr6g0484441 42.723 213 101 5 13 217 3 202 5.71e-48 166
Msa0905180 MtrunA17_Chr7g0253011 47.977 173 77 4 14 182 16 179 2.28e-47 166
Msa0905180 MtrunA17_Chr1g0200561 45.198 177 80 5 17 191 21 182 3.23e-47 164
Msa0905180 MtrunA17_Chr3g0139331 49.112 169 71 4 11 177 7 162 9.11e-47 163
Msa0905180 MtrunA17_Chr3g0130101 46.584 161 75 4 15 174 7 157 2.23e-45 159
Msa0905180 MtrunA17_Chr2g0312321 49.697 165 71 5 15 179 11 163 4.48e-45 157
Msa0905180 MtrunA17_Chr4g0054791 48.466 163 72 3 15 174 6 159 6.05e-45 157
Msa0905180 MtrunA17_Chr1g0201021 57.364 129 51 3 16 142 20 146 7.95e-45 162
Msa0905180 MtrunA17_Chr7g0214071 46.067 178 80 4 1 177 1 163 9.00e-45 155
Msa0905180 MtrunA17_Chr7g0217721 47.879 165 78 5 18 176 22 184 1.06e-44 157
Msa0905180 MtrunA17_Chr5g0428991 45.402 174 84 3 2 174 12 175 4.78e-44 161
Msa0905180 MtrunA17_Chr8g0364791 45.342 161 77 4 15 174 6 156 1.10e-43 157
Msa0905180 MtrunA17_Chr1g0197351 47.239 163 81 3 15 176 42 200 3.12e-43 157
Msa0905180 MtrunA17_Chr1g0147421 43.889 180 83 5 2 175 10 177 4.00e-43 154
Msa0905180 MtrunA17_Chr7g0217711 53.435 131 59 2 18 148 22 150 2.79e-42 146
Msa0905180 MtrunA17_Chr8g0385991 44.785 163 82 3 10 171 9 164 1.03e-41 146
Msa0905180 MtrunA17_Chr8g0384201 43.478 161 80 4 15 174 6 156 1.27e-41 152
Msa0905180 MtrunA17_Chr3g0128151 43.275 171 86 3 7 176 14 174 4.13e-41 152
Msa0905180 MtrunA17_Chr1g0183741 35.593 236 134 6 15 249 10 228 4.52e-41 146
Msa0905180 MtrunA17_Chr3g0144271 53.077 130 58 3 15 142 23 151 2.61e-40 148
Msa0905180 MtrunA17_Chr3g0128111 42.593 162 78 5 18 176 45 194 5.26e-40 142
Msa0905180 MtrunA17_Chr4g0026141 35.685 241 128 6 13 235 3 234 7.91e-39 139
Msa0905180 MtrunA17_Chr7g0261411 43.396 159 75 4 15 172 10 154 8.55e-39 140
Msa0905180 MtrunA17_Chr3g0131911 42.135 178 94 4 3 177 2 173 6.06e-38 137
Msa0905180 MtrunA17_Chr1g0197361 39.560 182 89 6 17 192 10 176 1.00e-37 143
Msa0905180 MtrunA17_Chr2g0321631 34.914 232 132 8 12 231 1 225 2.17e-37 135
Msa0905180 MtrunA17_Chr3g0092671 42.945 163 80 4 17 177 7 158 2.35e-37 142
Msa0905180 MtrunA17_Chr7g0266701 38.286 175 93 5 12 178 1 168 2.03e-35 130
Msa0905180 MtrunA17_Chr8g0345671 48.905 137 66 4 14 147 10 145 5.67e-35 133
Msa0905180 MtrunA17_Chr8g0345691 46.617 133 67 4 12 141 9 140 1.51e-31 124
Msa0905180 MtrunA17_Chr8g0345711 38.922 167 95 6 12 172 8 173 9.16e-31 115
Msa0905180 MtrunA17_Chr2g0321741 31.855 248 142 8 35 280 12 234 1.87e-28 114
Msa0905180 MtrunA17_Chr3g0113001 45.217 115 52 3 64 176 13 118 1.05e-27 110
Msa0905180 MtrunA17_Chr8g0345731 44.444 135 67 7 14 141 22 155 7.57e-27 105
Msa0905180 MtrunA17_Chr8g0345721 34.857 175 81 4 18 160 38 211 6.22e-25 101
Msa0905180 MtrunA17_Chr4g0050701 37.267 161 88 5 15 174 11 159 3.48e-24 98.6
Msa0905180 MtrunA17_Chr8g0345741 40.625 128 72 4 26 150 2 128 1.27e-23 95.9
Msa0905180 MtrunA17_Chr8g0345701 38.194 144 68 7 16 141 7 147 1.28e-19 85.5
Msa0905180 MtrunA17_Chr3g0113031 43.564 101 45 4 79 176 3 94 5.78e-19 85.9
Msa0905180 MtrunA17_Chr8g0384351 33.533 167 76 8 15 179 10 143 1.47e-18 82.8
Msa0905180 MtrunA17_Chr7g0251651 34.109 129 81 3 18 145 21 146 1.58e-18 83.2
Msa0905180 MtrunA17_Chr7g0243371 45.333 75 40 1 69 142 17 91 1.27e-17 78.2
Msa0905180 MtrunA17_Chr7g0251671 34.074 135 81 4 14 145 9 138 1.36e-17 79.7
Msa0905180 MtrunA17_Chr7g0251661 33.333 135 86 3 14 147 9 140 1.38e-17 79.3
Msa0905180 MtrunA17_Chr3g0130321 30.435 161 103 4 15 173 7 160 8.65e-17 78.6
Msa0905180 MtrunA17_Chr1g0194791 61.702 47 17 1 17 62 48 94 7.32e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0905180 AT1G26870.1 58.088 272 104 6 1 265 1 269 6.52e-95 290
Msa0905180 AT5G39820.1 64.706 204 56 6 1 190 5 206 1.24e-90 276
Msa0905180 AT2G43000.1 61.111 162 53 3 16 177 19 170 2.62e-70 222
Msa0905180 AT3G15510.1 49.246 199 91 6 19 210 21 216 8.53e-59 195
Msa0905180 AT3G12910.1 56.805 169 64 4 16 177 22 188 1.70e-58 192
Msa0905180 AT2G02450.2 53.750 160 62 3 15 174 51 198 8.97e-58 194
Msa0905180 AT2G02450.1 53.750 160 62 3 15 174 51 198 1.03e-57 193
Msa0905180 AT1G61110.1 53.614 166 73 3 15 177 16 180 1.71e-57 191
Msa0905180 AT3G04070.2 53.672 177 72 5 15 185 10 182 4.46e-57 190
Msa0905180 AT3G04070.1 48.705 193 73 5 15 185 10 198 1.75e-54 184
Msa0905180 AT4G27410.2 53.988 163 64 3 15 177 14 165 1.79e-54 182
Msa0905180 AT1G69490.1 49.143 175 82 4 7 181 1 168 7.81e-54 179
Msa0905180 AT3G17730.1 51.479 169 71 3 15 182 6 164 1.01e-53 178
Msa0905180 AT1G01720.1 53.988 163 67 4 15 177 7 161 3.82e-53 178
Msa0905180 AT5G17260.1 52.795 161 66 4 15 174 6 157 6.00e-53 183
Msa0905180 AT5G08790.1 50.909 165 74 3 14 178 6 163 9.06e-53 177
Msa0905180 AT3G15500.1 52.326 172 71 3 6 177 5 165 1.31e-52 178
Msa0905180 AT1G52890.1 51.705 176 69 4 7 177 1 165 1.98e-52 177
Msa0905180 AT3G03200.1 52.174 161 67 4 15 174 6 157 2.05e-52 182
Msa0905180 AT1G65910.1 51.875 160 66 3 17 175 8 157 5.85e-52 183
Msa0905180 AT4G27410.3 49.162 179 65 3 15 177 14 182 1.29e-51 175
Msa0905180 AT5G63790.1 50.303 165 75 3 14 178 49 206 1.37e-51 175
Msa0905180 AT5G63790.2 50.303 165 75 3 14 178 59 216 1.57e-51 175
Msa0905180 AT4G36160.1 48.750 160 68 4 17 174 12 159 1.84e-51 176
Msa0905180 AT4G36160.3 48.750 160 68 4 17 174 12 159 1.84e-51 176
Msa0905180 AT5G61430.1 50.617 162 71 3 14 175 15 167 1.99e-51 175
Msa0905180 AT2G17040.1 48.555 173 72 4 13 183 4 161 2.08e-51 173
Msa0905180 AT4G36160.2 48.750 160 68 4 17 174 16 163 2.27e-51 176
Msa0905180 AT2G18060.3 48.750 160 68 4 17 174 11 158 3.07e-51 176
Msa0905180 AT2G18060.1 48.750 160 68 4 17 174 11 158 3.07e-51 176
Msa0905180 AT1G77450.1 44.019 209 100 6 17 218 12 210 4.14e-51 172
Msa0905180 AT1G12260.2 48.521 169 71 5 9 174 1 156 4.29e-51 174
Msa0905180 AT3G04060.1 50.000 164 74 2 11 174 16 171 5.44e-51 174
Msa0905180 AT4G10350.1 48.837 172 76 3 17 186 11 172 6.13e-51 174
Msa0905180 AT1G12260.1 48.521 169 71 5 9 174 1 156 6.13e-51 176
Msa0905180 AT5G18270.1 48.521 169 79 2 14 182 20 180 1.07e-50 173
Msa0905180 AT5G39610.1 43.541 209 103 5 14 219 19 215 1.14e-50 172
Msa0905180 AT5G62380.2 49.689 161 65 5 17 174 9 156 1.19e-50 174
Msa0905180 AT5G62380.1 49.689 161 65 5 17 174 9 156 1.19e-50 174
Msa0905180 AT4G17980.1 51.235 162 70 3 15 174 6 160 2.70e-50 170
Msa0905180 AT5G07680.2 50.000 162 72 3 14 175 2 154 2.92e-50 172
Msa0905180 AT4G17980.2 51.235 162 70 3 15 174 6 160 3.39e-50 171
Msa0905180 AT5G07680.1 50.000 162 72 3 14 175 16 168 4.20e-50 172
Msa0905180 AT5G18270.2 47.929 169 80 2 14 182 20 180 4.74e-50 172
Msa0905180 AT1G76420.1 48.187 193 80 6 2 193 15 188 5.78e-50 171
Msa0905180 AT5G66300.1 44.828 174 83 4 17 188 14 176 1.97e-49 169
Msa0905180 AT3G18400.1 49.102 167 69 4 13 177 3 155 2.11e-49 169
Msa0905180 AT1G52880.1 52.381 168 67 4 19 179 21 182 2.36e-49 169
Msa0905180 AT1G62700.1 48.521 169 71 5 9 174 1 156 2.50e-49 171
Msa0905180 AT1G62700.2 48.521 169 71 5 9 174 1 156 2.50e-49 171
Msa0905180 AT1G33280.1 51.235 162 64 4 17 176 10 158 1.80e-48 167
Msa0905180 AT1G56010.2 49.714 175 78 6 2 174 5 171 2.51e-48 167
Msa0905180 AT1G54330.1 51.553 161 64 4 15 174 6 153 2.84e-48 166
Msa0905180 AT2G46770.1 40.609 197 100 5 1 188 2 190 4.94e-48 167
Msa0905180 AT2G24430.2 48.193 166 74 3 13 177 14 168 7.03e-48 165
Msa0905180 AT2G24430.1 48.193 166 74 3 13 177 14 168 7.03e-48 165
Msa0905180 AT3G15170.1 45.146 206 99 5 17 219 22 216 8.01e-47 162
Msa0905180 AT5G46590.1 48.447 161 74 3 15 174 6 158 9.97e-47 162
Msa0905180 AT1G32770.1 43.258 178 97 3 2 176 3 179 9.99e-47 164
Msa0905180 AT5G46590.2 53.676 136 61 2 15 149 6 140 1.33e-46 161
Msa0905180 AT1G71930.2 43.158 190 85 7 12 193 1 175 1.37e-46 162
Msa0905180 AT1G71930.1 43.158 190 85 7 12 193 1 175 1.37e-46 162
Msa0905180 AT5G53950.1 52.439 164 65 4 15 175 17 170 2.11e-46 163
Msa0905180 AT3G10500.1 48.256 172 78 4 7 177 1 162 2.20e-46 167
Msa0905180 AT1G79580.3 45.732 164 75 3 17 178 19 170 4.65e-46 162
Msa0905180 AT1G79580.5 45.732 164 75 3 17 178 19 170 4.65e-46 162
Msa0905180 AT1G79580.4 45.732 164 75 3 17 178 19 170 4.65e-46 162
Msa0905180 AT1G79580.2 45.732 164 75 3 17 178 19 170 4.65e-46 162
Msa0905180 AT1G79580.1 45.732 164 75 3 17 178 19 170 4.65e-46 162
Msa0905180 AT3G29035.1 57.364 129 53 2 14 142 23 149 9.16e-46 160
Msa0905180 AT5G13180.1 47.929 169 73 3 10 177 9 163 1.78e-45 157
Msa0905180 AT3G10480.2 47.239 163 75 3 15 176 27 179 1.94e-45 162
Msa0905180 AT3G10490.1 46.626 163 77 3 15 176 27 180 2.23e-45 156
Msa0905180 AT5G04410.1 43.316 187 95 4 7 192 1 177 2.78e-45 164
Msa0905180 AT3G61910.1 37.668 223 116 5 7 219 3 212 3.97e-45 159
Msa0905180 AT3G12977.1 40.444 225 118 7 3 222 5 218 6.92e-45 156
Msa0905180 AT1G32510.1 39.912 228 107 8 15 235 6 210 7.22e-45 156
Msa0905180 AT3G10480.1 47.239 163 76 4 15 176 27 180 8.26e-45 160
Msa0905180 AT3G10490.2 46.626 163 77 3 15 176 27 180 8.81e-44 158
Msa0905180 AT1G34190.1 47.239 163 73 4 17 177 18 169 1.31e-43 159
Msa0905180 AT5G24590.2 44.253 174 87 2 4 176 2 166 1.59e-43 157
Msa0905180 AT2G33480.1 44.633 177 84 4 1 177 1 163 1.10e-42 150
Msa0905180 AT2G27300.1 40.909 176 86 4 1 176 1 158 2.89e-42 151
Msa0905180 AT5G09330.5 44.242 165 73 4 15 174 6 156 3.50e-42 154
Msa0905180 AT5G09330.2 44.242 165 73 4 15 174 6 156 3.50e-42 154
Msa0905180 AT5G09330.4 44.242 165 73 4 15 174 6 156 3.50e-42 154
Msa0905180 AT5G09330.3 44.242 165 73 4 15 174 6 156 3.50e-42 154
Msa0905180 AT5G09330.1 44.242 165 73 4 15 174 6 156 3.50e-42 154
Msa0905180 AT3G49530.2 35.931 231 128 5 7 227 5 225 5.85e-42 152
Msa0905180 AT1G34180.3 54.331 127 56 2 17 142 18 143 7.60e-42 152
Msa0905180 AT3G49530.1 43.787 169 85 3 7 174 5 164 1.30e-41 152
Msa0905180 AT4G35580.2 45.882 170 79 5 7 174 1 159 1.35e-41 154
Msa0905180 AT4G35580.3 45.882 170 79 5 7 174 1 159 1.50e-41 153
Msa0905180 AT1G33060.1 43.103 174 88 3 2 174 11 174 1.61e-41 155
Msa0905180 AT4G35580.1 45.882 170 79 5 7 174 1 159 1.80e-41 153
Msa0905180 AT1G33060.2 43.103 174 88 3 2 174 11 174 1.84e-41 155
Msa0905180 AT1G34180.1 54.331 127 56 2 17 142 18 143 2.85e-41 153
Msa0905180 AT2G33480.2 44.633 177 82 5 1 177 1 161 4.79e-41 146
Msa0905180 AT3G10480.3 39.796 196 75 4 15 176 27 213 7.39e-41 151
Msa0905180 AT5G64060.1 41.975 162 83 3 14 174 5 156 4.70e-40 146
Msa0905180 AT1G34180.4 49.640 139 56 2 17 142 18 155 4.71e-40 148
Msa0905180 AT1G34180.2 49.640 139 56 2 17 142 18 155 1.68e-39 148
Msa0905180 AT4G28530.1 42.623 183 74 6 15 180 10 178 2.00e-39 144
Msa0905180 AT5G22290.1 40.764 157 77 3 15 171 21 161 1.21e-38 142
Msa0905180 AT3G44290.2 39.394 165 83 2 12 176 11 158 7.52e-38 136
Msa0905180 AT3G44290.1 39.634 164 82 2 12 175 11 157 2.68e-37 138
Msa0905180 AT5G04395.1 42.236 161 77 5 15 160 28 187 6.99e-35 127
Msa0905180 AT1G32870.2 43.503 177 89 5 15 190 10 176 5.82e-34 132
Msa0905180 AT1G32870.1 43.503 177 89 5 15 190 10 176 6.95e-34 132
Msa0905180 AT1G32870.3 42.105 190 98 6 3 190 33 212 8.42e-34 132
Msa0905180 AT2G43000.2 57.000 100 34 2 78 177 2 92 8.19e-33 122
Msa0905180 AT5G61430.2 50.000 112 48 2 64 175 1 104 1.16e-32 124
Msa0905180 AT1G56010.1 51.351 111 47 3 64 174 1 104 3.35e-31 119
Msa0905180 AT3G44350.2 35.503 169 97 3 13 177 3 163 4.25e-31 119
Msa0905180 AT3G12977.2 39.264 163 87 3 63 222 12 165 1.21e-30 117
Msa0905180 AT5G22380.1 37.209 172 94 6 12 177 2 165 1.57e-30 117
Msa0905180 AT4G10350.2 46.774 124 56 2 63 186 12 125 1.91e-30 118
Msa0905180 AT3G44350.1 37.241 145 87 2 13 153 3 147 2.02e-29 112
Msa0905180 AT4G01550.1 43.478 138 73 4 12 145 2 138 8.24e-28 114
Msa0905180 AT5G64530.1 39.645 169 83 6 15 177 3 158 3.45e-26 104
Msa0905180 AT5G64530.2 42.748 131 61 4 14 143 2 119 6.48e-26 102
Msa0905180 AT4G01520.1 42.537 134 70 5 18 145 7 139 1.07e-25 105
Msa0905180 AT4G01540.3 42.537 134 70 5 18 145 7 139 5.43e-25 105
Msa0905180 AT4G01540.4 42.537 134 70 5 18 145 7 139 6.54e-25 105
Msa0905180 AT4G01540.1 42.537 134 70 5 18 145 7 139 8.55e-25 105
Msa0905180 AT4G01540.2 42.537 134 70 5 18 145 7 139 9.07e-25 105
Msa0905180 AT4G28530.2 45.370 108 42 3 15 106 10 116 8.39e-21 92.4
Msa0905180 AT2G33480.3 42.202 109 53 3 69 177 8 106 8.96e-21 90.1
Msa0905180 AT1G02230.1 39.850 133 72 4 18 145 6 135 9.05e-21 93.2
Msa0905180 AT2G18060.2 51.852 81 27 3 94 174 2 70 1.79e-20 90.9
Msa0905180 AT1G02250.1 41.406 128 67 4 18 140 6 130 3.04e-20 91.7
Msa0905180 AT3G04420.2 38.095 126 74 3 18 140 6 130 5.92e-20 89.7
Msa0905180 AT3G04420.1 38.095 126 74 3 18 140 6 130 2.13e-19 89.0
Msa0905180 AT1G01010.1 28.519 270 157 8 18 271 6 255 3.12e-19 89.4
Msa0905180 AT3G04430.1 37.879 132 70 3 21 141 6 136 1.88e-18 83.2
Msa0905180 AT3G55210.1 30.220 182 94 6 15 180 11 175 1.92e-17 82.4
Msa0905180 AT5G14000.2 30.921 152 99 3 1 150 1 148 5.11e-17 78.2
Msa0905180 AT5G14000.1 27.568 185 116 4 1 183 1 169 8.48e-17 79.0
Msa0905180 AT1G02220.1 38.095 126 71 4 18 140 6 127 1.98e-16 80.9
Msa0905180 AT3G56530.1 32.593 135 88 2 17 149 54 187 7.12e-16 78.2
Msa0905180 AT3G10490.4 41.573 89 41 3 89 176 2 80 9.69e-15 75.1
Msa0905180 AT3G10490.3 41.573 89 41 3 89 176 2 80 9.69e-15 75.1
Msa0905180 AT5G50820.1 32.331 133 74 5 15 142 17 138 1.29e-13 69.3
Msa0905180 AT5G22290.2 40.260 77 30 3 95 171 2 62 1.28e-11 64.7

Find 72 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGAATTTGTGAGGATT+TGG 0.247261 6_2:-3209409 None:intergenic
TAACCATGCTTCCTGGTAAC+TGG 0.259108 6_2:-3208664 None:intergenic
CTTTCCAACACTAACTATAT+TGG 0.260059 6_2:+3209519 Msa0905180:CDS
GAGTTACAAGAGCTGGATTT+TGG 0.268455 6_2:+3207852 Msa0905180:CDS
GAAGTCACTTGTCTTCTATA+AGG 0.296503 6_2:+3207934 Msa0905180:CDS
CTTCAAGTGTGTAGAACATT+AGG 0.306455 6_2:-3209455 None:intergenic
CCAGCTCTTGTAACTCTATT+AGG 0.312453 6_2:-3207845 None:intergenic
TTGTTGATAGGTTTGTAATT+TGG 0.312973 6_2:-3209372 None:intergenic
TTTCCATCTGATGAATATAT+AGG 0.335700 6_2:-3207896 None:intergenic
GATGCAAATAATCAATATAA+TGG 0.359002 6_2:+3209549 Msa0905180:CDS
TCACAAATTCCTGTTCCTAA+TGG 0.378078 6_2:+3209417 Msa0905180:CDS
ACTTGCTTAATAAGTTCAAT+AGG 0.383211 6_2:-3207091 None:intergenic
CCCACAGATGAAGAGCTTGT+TGG 0.384548 6_2:+3207031 Msa0905180:CDS
TTGTACCATGGAAAGGGAAT+TGG 0.393283 6_2:-3208615 None:intergenic
AATTCATTAACCATGCTTCC+TGG 0.399214 6_2:-3208671 None:intergenic
CTTAATCAATGGGAAAATCT+TGG 0.415172 6_2:+3209636 Msa0905180:CDS
TCTTGAATATTCACAATGTT+TGG 0.417304 6_2:-3209603 None:intergenic
GTCCTCAAAGCATCAAAACT+TGG 0.429523 6_2:-3209690 None:intergenic
GGAAGGCAACTGGAACTGAT+AGG 0.433013 6_2:+3207873 Msa0905180:CDS
CTTTGAGGACTAGTGTTACA+TGG 0.434518 6_2:+3209703 Msa0905180:CDS
ATCAAATGCAGCTTAATCAA+TGG 0.439366 6_2:+3209625 Msa0905180:CDS
ATTGGATGATGCATGAGTTT+AGG 0.443999 6_2:+3207984 Msa0905180:CDS
TGAAGCTGAGAAGTTGGTAT+TGG 0.464726 6_2:-3209343 None:intergenic
ATTGTGTTGATGTTGTTGAT+AGG 0.466813 6_2:-3209384 None:intergenic
AAGTCACTTGTCTTCTATAA+GGG 0.469878 6_2:+3207935 Msa0905180:CDS
AAGGTTGATGATTTGATGCC+TGG 0.470160 6_2:+3206995 Msa0905180:CDS
TCAAATGCAGCTTAATCAAT+GGG 0.472008 6_2:+3209626 Msa0905180:CDS
CCTAATAGAGTTACAAGAGC+TGG 0.479097 6_2:+3207845 Msa0905180:CDS
ATAATGTCTCCATTAGGAAC+AGG 0.480950 6_2:-3209426 None:intergenic
TTATCAATAATGTCTCCATT+AGG 0.481250 6_2:-3209432 None:intergenic
AAACTTGGAGACAAATTGAA+TGG 0.481553 6_2:-3209675 None:intergenic
TATAAGAATTCTTACTTGGA+AGG 0.484332 6_2:-3207141 None:intergenic
TGTGCACTTTGTAGAACCAT+TGG 0.491342 6_2:-3209478 None:intergenic
TTCTTACTTGGAAGGTCCCA+TGG 0.492827 6_2:-3207133 None:intergenic
CCTTGGATCTCCCAGTTACC+AGG 0.495317 6_2:+3208653 Msa0905180:CDS
CCAAAGGGATGAAAACTGAT+TGG 0.497200 6_2:+3207966 Msa0905180:CDS
TCATCAGATGGAAAATGCAT+TGG 0.498527 6_2:+3207905 Msa0905180:CDS
TTTACTAGTGACATAGGTTG+TGG 0.499478 6_2:-3209754 None:intergenic
AACCATGCTTCCTGGTAACT+GGG 0.505975 6_2:-3208663 None:intergenic
AAAACCAATATAGTTAGTGT+TGG 0.509141 6_2:-3209523 None:intergenic
GTAACATTTACTAGTGACAT+AGG 0.511602 6_2:-3209760 None:intergenic
AAAATCTGAAGCTGAGAAGT+TGG 0.515670 6_2:-3209349 None:intergenic
ACCAACAAGCTCTTCATCTG+TGG 0.517278 6_2:-3207032 None:intergenic
TATTGAACTTATTAAGCAAG+TGG 0.518925 6_2:+3207093 Msa0905180:CDS
GAAAACCAATTCCCTTTCCA+TGG 0.519977 6_2:+3208610 Msa0905180:CDS
AGGATTCATGGGCAATCTGT+AGG 0.535758 6_2:+3208579 Msa0905180:intron
GTGGGATGAAAACGAAAGCC+AGG 0.544940 6_2:-3207013 None:intergenic
AATGGTATTTCTATTGTCCA+AGG 0.545816 6_2:+3207795 Msa0905180:CDS
ATGTTTGGTTGCATATCTTG+AGG 0.549489 6_2:-3209588 None:intergenic
ATATTTACAAACATGATCCA+TGG 0.555585 6_2:+3207116 Msa0905180:CDS
CCTGGTAACTGGGAGATCCA+AGG 0.558240 6_2:-3208653 None:intergenic
AGGCCTATATATTCATCAGA+TGG 0.558926 6_2:+3207893 Msa0905180:CDS
CATGGAGGAAAGAACTGAGA+TGG 0.565541 6_2:+3206964 None:intergenic
CTGGTAACTGGGAGATCCAA+GGG 0.568030 6_2:-3208652 None:intergenic
TACTAAAACACTTACATTTG+GGG 0.571327 6_2:-3208065 None:intergenic
CTCCCAGTTACCAGGAAGCA+TGG 0.571720 6_2:+3208661 Msa0905180:CDS
TATTTACAAACATGATCCAT+GGG 0.576790 6_2:+3207117 Msa0905180:CDS
TTCTACACACTTGAAGCCAA+TGG 0.578960 6_2:+3209462 Msa0905180:CDS
CAAGAAGAGCTAGCAAGTAG+TGG 0.581972 6_2:+3207764 Msa0905180:intron
ACAGAACATGGATCATCAGC+AGG 0.584566 6_2:+3208755 Msa0905180:CDS
CCAACAAGCTCTTCATCTGT+GGG 0.588377 6_2:-3207031 None:intergenic
TCATGCACAACAACAGAACA+TGG 0.600328 6_2:+3208743 Msa0905180:CDS
GTGGACATTTCACTAGTGCA+AGG 0.608685 6_2:-3209735 None:intergenic
ATAAGGGTAGAGCTGCCAAA+GGG 0.609579 6_2:+3207951 Msa0905180:CDS
ATGGTATTTCTATTGTCCAA+GGG 0.621463 6_2:+3207796 Msa0905180:CDS
CACTAGTAAATGTTACACTT+AGG 0.626341 6_2:+3209767 Msa0905180:CDS
ATTAGGAACAGGAATTTGTG+AGG 0.633156 6_2:-3209415 None:intergenic
AACTGAGATGGATATTAACA+AGG 0.642088 6_2:+3206976 Msa0905180:CDS
TTTGAGGACTAGTGTTACAT+GGG 0.649862 6_2:+3209704 Msa0905180:CDS
GTGTTTGAATCTGAAATGCA+AGG 0.649870 6_2:-3208010 None:intergenic
TATAAGGGTAGAGCTGCCAA+AGG 0.669349 6_2:+3207950 Msa0905180:CDS
GACATTTCACTAGTGCAAGG+TGG 0.776490 6_2:-3209732 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACACAAAATTTTAAATATTA+AGG + chr6_2:3207246-3207265 Msa0905180:intron 10.0%
!! TAATGAATAAAAAATTTGTA+GGG - chr6_2:3207319-3207338 None:intergenic 10.0%
!!! TATCTAGAAATTTTATTAAA+TGG - chr6_2:3208187-3208206 None:intergenic 10.0%
!! AATATTAGAAAAAGGAAAAT+GGG - chr6_2:3207212-3207231 None:intergenic 15.0%
!! CTAATGAATAAAAAATTTGT+AGG - chr6_2:3207320-3207339 None:intergenic 15.0%
!!! TTTTAATTAATTTCTTTGCA+AGG + chr6_2:3207371-3207390 Msa0905180:intron 15.0%
!!! AAATTAAACATAGTCTTTTT+TGG - chr6_2:3207398-3207417 None:intergenic 15.0%
!! ATAAAAGATGAAGATTAAAA+TGG + chr6_2:3207419-3207438 Msa0905180:intron 15.0%
!! TGATAAATAAGATAGAATAT+AGG - chr6_2:3207571-3207590 None:intergenic 15.0%
!!! AAAATGAAGTTAACATTTTT+TGG - chr6_2:3207733-3207752 None:intergenic 15.0%
!! TTAAATAGTAAAAATGAGAT+AGG - chr6_2:3208102-3208121 None:intergenic 15.0%
!!! TTCATACTATGTTTTTTTAA+AGG - chr6_2:3208354-3208373 None:intergenic 15.0%
!! TTTATTCCAAATGTAAAAAT+TGG - chr6_2:3208402-3208421 None:intergenic 15.0%
!!! TTAACACTAAAAGTTTTTAT+TGG + chr6_2:3209071-3209090 Msa0905180:intron 15.0%
!!! TAACACTAAAAGTTTTTATT+GGG + chr6_2:3209072-3209091 Msa0905180:intron 15.0%
!! AATTGAATGGATAATATATT+AGG - chr6_2:3209291-3209310 None:intergenic 15.0%
!! CAATATTAGAAAAAGGAAAA+TGG - chr6_2:3207213-3207232 None:intergenic 20.0%
!!! TCTAGAACAATATTAGAAAA+AGG - chr6_2:3207220-3207239 None:intergenic 20.0%
!!! CTTTTATCTGAAAACTTTTT+AGG - chr6_2:3208040-3208059 None:intergenic 20.0%
!! ATACTAAAACACTTACATTT+GGG - chr6_2:3208069-3208088 None:intergenic 20.0%
!! AATACTAAAACACTTACATT+TGG - chr6_2:3208070-3208089 None:intergenic 20.0%
!!! TTTCTTCCAATTTTTACATT+TGG + chr6_2:3208393-3208412 Msa0905180:intron 20.0%
!! GATGCAAATAATCAATATAA+TGG + chr6_2:3209549-3209568 Msa0905180:CDS 20.0%
! ACTTGCTTAATAAGTTCAAT+AGG - chr6_2:3207094-3207113 None:intergenic 25.0%
! TATTGAACTTATTAAGCAAG+TGG + chr6_2:3207093-3207112 Msa0905180:CDS 25.0%
! ATATTTACAAACATGATCCA+TGG + chr6_2:3207116-3207135 Msa0905180:CDS 25.0%
! TATTTACAAACATGATCCAT+GGG + chr6_2:3207117-3207136 Msa0905180:CDS 25.0%
! TATAAGAATTCTTACTTGGA+AGG - chr6_2:3207144-3207163 None:intergenic 25.0%
! GTGTTATAAGAATTCTTACT+TGG - chr6_2:3207148-3207167 None:intergenic 25.0%
!! TGGATAAGAAAATGATGTTT+TGG + chr6_2:3207439-3207458 Msa0905180:intron 25.0%
! TTTCCATCTGATGAATATAT+AGG - chr6_2:3207899-3207918 None:intergenic 25.0%
!!! TTATCTGAAAACTTTTTAGG+AGG - chr6_2:3208037-3208056 None:intergenic 25.0%
! TACTAAAACACTTACATTTG+GGG - chr6_2:3208068-3208087 None:intergenic 25.0%
! CATAAAGGACTAATCAAAAT+TGG - chr6_2:3208551-3208570 None:intergenic 25.0%
!! TAGTCCTTTATGAATTTTTC+AGG + chr6_2:3208559-3208578 Msa0905180:intron 25.0%
! GAATCCTGAAAAATTCATAA+AGG - chr6_2:3208566-3208585 None:intergenic 25.0%
!!! TATGAATTTTTCAGGATTCA+TGG + chr6_2:3208567-3208586 Msa0905180:intron 25.0%
!!! ATGAATTTTTCAGGATTCAT+GGG + chr6_2:3208568-3208587 Msa0905180:intron 25.0%
!! TATTATTTTCTGAACAGAGT+TGG - chr6_2:3208721-3208740 None:intergenic 25.0%
! AAACTTACAAATGTAAGTGT+TGG + chr6_2:3208781-3208800 Msa0905180:intron 25.0%
!! TTGTTGATAGGTTTGTAATT+TGG - chr6_2:3209375-3209394 None:intergenic 25.0%
! TTATCAATAATGTCTCCATT+AGG - chr6_2:3209435-3209454 None:intergenic 25.0%
! AAAACCAATATAGTTAGTGT+TGG - chr6_2:3209526-3209545 None:intergenic 25.0%
! TCTTGAATATTCACAATGTT+TGG - chr6_2:3209606-3209625 None:intergenic 25.0%
AACTGAGATGGATATTAACA+AGG + chr6_2:3206976-3206995 Msa0905180:CDS 30.0%
! TTTGCTGAATTTTTCTCTTG+AGG - chr6_2:3207063-3207082 None:intergenic 30.0%
! AATGGTATTTCTATTGTCCA+AGG + chr6_2:3207795-3207814 Msa0905180:CDS 30.0%
! ATGGTATTTCTATTGTCCAA+GGG + chr6_2:3207796-3207815 Msa0905180:CDS 30.0%
! TTTCTATATTTTCTGTCCCT+TGG - chr6_2:3207815-3207834 None:intergenic 30.0%
AAGTCACTTGTCTTCTATAA+GGG + chr6_2:3207935-3207954 Msa0905180:CDS 30.0%
! GTAAATGATAGATGATGGTT+TGG + chr6_2:3208264-3208283 Msa0905180:intron 30.0%
AAAGGAAAAAATAGAGTGCA+TGG - chr6_2:3208336-3208355 None:intergenic 30.0%
AATGGACCCACATAAAATTA+TGG + chr6_2:3209124-3209143 Msa0905180:intron 30.0%
ATGGACCCACATAAAATTAT+GGG + chr6_2:3209125-3209144 Msa0905180:intron 30.0%
AGTGTTAGAGTTAGTATTGT+CGG + chr6_2:3209233-3209252 Msa0905180:intron 30.0%
CTTGTTGCTACAAAATTGAA+TGG - chr6_2:3209304-3209323 None:intergenic 30.0%
! ATTGTGTTGATGTTGTTGAT+AGG - chr6_2:3209387-3209406 None:intergenic 30.0%
CTTTCCAACACTAACTATAT+TGG + chr6_2:3209519-3209538 Msa0905180:CDS 30.0%
ATCAAATGCAGCTTAATCAA+TGG + chr6_2:3209625-3209644 Msa0905180:CDS 30.0%
TCAAATGCAGCTTAATCAAT+GGG + chr6_2:3209626-3209645 Msa0905180:CDS 30.0%
CTTAATCAATGGGAAAATCT+TGG + chr6_2:3209636-3209655 Msa0905180:CDS 30.0%
AAACTTGGAGACAAATTGAA+TGG - chr6_2:3209678-3209697 None:intergenic 30.0%
GTAACATTTACTAGTGACAT+AGG - chr6_2:3209763-3209782 None:intergenic 30.0%
CAAGTAGTGGTGAAAAAGAA+TGG + chr6_2:3207777-3207796 Msa0905180:CDS 35.0%
AGGCCTATATATTCATCAGA+TGG + chr6_2:3207893-3207912 Msa0905180:CDS 35.0%
TCATCAGATGGAAAATGCAT+TGG + chr6_2:3207905-3207924 Msa0905180:CDS 35.0%
GAAGTCACTTGTCTTCTATA+AGG + chr6_2:3207934-3207953 Msa0905180:CDS 35.0%
ATTGGATGATGCATGAGTTT+AGG + chr6_2:3207984-3208003 Msa0905180:CDS 35.0%
! GTGTTTGAATCTGAAATGCA+AGG - chr6_2:3208013-3208032 None:intergenic 35.0%
GTGCTGTAAATGATAGATGA+TGG + chr6_2:3208259-3208278 Msa0905180:intron 35.0%
! AATGATAGATGATGGTTTGG+AGG + chr6_2:3208267-3208286 Msa0905180:intron 35.0%
AAAAGACATCTCAACTAGGT+TGG - chr6_2:3208299-3208318 None:intergenic 35.0%
!! TGCTTTTTGTACCATGGAAA+GGG - chr6_2:3208624-3208643 None:intergenic 35.0%
!! ATGCTTTTTGTACCATGGAA+AGG - chr6_2:3208625-3208644 None:intergenic 35.0%
!! AGACAATGCTTTTTGTACCA+TGG - chr6_2:3208630-3208649 None:intergenic 35.0%
AATTCATTAACCATGCTTCC+TGG - chr6_2:3208674-3208693 None:intergenic 35.0%
! TCGTCCCACTATTTTGTAAA+TGG + chr6_2:3209106-3209125 Msa0905180:intron 35.0%
GGGTCCATTTACAAAATAGT+GGG - chr6_2:3209113-3209132 None:intergenic 35.0%
TGGGTCCATTTACAAAATAG+TGG - chr6_2:3209114-3209133 None:intergenic 35.0%
! CGGATCCCATAATTTTATGT+GGG - chr6_2:3209133-3209152 None:intergenic 35.0%
CTTGTTAGGTCAAATTCATG+CGG - chr6_2:3209153-3209172 None:intergenic 35.0%
CCTAACAAGAGAATTAGCAT+CGG + chr6_2:3209164-3209183 Msa0905180:intron 35.0%
! AAAATCTGAAGCTGAGAAGT+TGG - chr6_2:3209352-3209371 None:intergenic 35.0%
AACAGGAATTTGTGAGGATT+TGG - chr6_2:3209412-3209431 None:intergenic 35.0%
ATTAGGAACAGGAATTTGTG+AGG - chr6_2:3209418-3209437 None:intergenic 35.0%
TCACAAATTCCTGTTCCTAA+TGG + chr6_2:3209417-3209436 Msa0905180:CDS 35.0%
ATAATGTCTCCATTAGGAAC+AGG - chr6_2:3209429-3209448 None:intergenic 35.0%
CTTCAAGTGTGTAGAACATT+AGG - chr6_2:3209458-3209477 None:intergenic 35.0%
ATGTTTGGTTGCATATCTTG+AGG - chr6_2:3209591-3209610 None:intergenic 35.0%
! TTTGAGGACTAGTGTTACAT+GGG + chr6_2:3209704-3209723 Msa0905180:CDS 35.0%
TTTACTAGTGACATAGGTTG+TGG - chr6_2:3209757-3209776 None:intergenic 35.0%
!! AAGGTTGATGATTTGATGCC+TGG + chr6_2:3206995-3207014 Msa0905180:CDS 40.0%
CCAGCTCTTGTAACTCTATT+AGG - chr6_2:3207848-3207867 None:intergenic 40.0%
CCTAATAGAGTTACAAGAGC+TGG + chr6_2:3207845-3207864 Msa0905180:CDS 40.0%
! GAGTTACAAGAGCTGGATTT+TGG + chr6_2:3207852-3207871 Msa0905180:CDS 40.0%
! TACAAGAGCTGGATTTTGGA+AGG + chr6_2:3207856-3207875 Msa0905180:CDS 40.0%
! CCAATCAGTTTTCATCCCTT+TGG - chr6_2:3207969-3207988 None:intergenic 40.0%
CCAAAGGGATGAAAACTGAT+TGG + chr6_2:3207966-3207985 Msa0905180:CDS 40.0%
GCAGAAAAGACATCTCAACT+AGG - chr6_2:3208303-3208322 None:intergenic 40.0%
TAGAGTGCATGGACATCAAA+CGG - chr6_2:3208325-3208344 None:intergenic 40.0%
GAAAACCAATTCCCTTTCCA+TGG + chr6_2:3208610-3208629 Msa0905180:CDS 40.0%
TTGTACCATGGAAAGGGAAT+TGG - chr6_2:3208618-3208637 None:intergenic 40.0%
!! AAAAAGCATTGTCTCACCCT+TGG + chr6_2:3208636-3208655 Msa0905180:CDS 40.0%
TCATGCACAACAACAGAACA+TGG + chr6_2:3208743-3208762 Msa0905180:CDS 40.0%
! GCGGATCCCATAATTTTATG+TGG - chr6_2:3209134-3209153 None:intergenic 40.0%
CCGATGCTAATTCTCTTGTT+AGG - chr6_2:3209167-3209186 None:intergenic 40.0%
!! TGAAGCTGAGAAGTTGGTAT+TGG - chr6_2:3209346-3209365 None:intergenic 40.0%
TTCTACACACTTGAAGCCAA+TGG + chr6_2:3209462-3209481 Msa0905180:CDS 40.0%
TGTGCACTTTGTAGAACCAT+TGG - chr6_2:3209481-3209500 None:intergenic 40.0%
!! CTCCAAGTTTTGATGCTTTG+AGG + chr6_2:3209688-3209707 Msa0905180:CDS 40.0%
! GTCCTCAAAGCATCAAAACT+TGG - chr6_2:3209693-3209712 None:intergenic 40.0%
! CTTTGAGGACTAGTGTTACA+TGG + chr6_2:3209703-3209722 Msa0905180:CDS 40.0%
CCAACAAGCTCTTCATCTGT+GGG - chr6_2:3207034-3207053 None:intergenic 45.0%
ACCAACAAGCTCTTCATCTG+TGG - chr6_2:3207035-3207054 None:intergenic 45.0%
TTCTTACTTGGAAGGTCCCA+TGG - chr6_2:3207136-3207155 None:intergenic 45.0%
CAAGAAGAGCTAGCAAGTAG+TGG + chr6_2:3207764-3207783 Msa0905180:intron 45.0%
TATAAGGGTAGAGCTGCCAA+AGG + chr6_2:3207950-3207969 Msa0905180:CDS 45.0%
ATAAGGGTAGAGCTGCCAAA+GGG + chr6_2:3207951-3207970 Msa0905180:CDS 45.0%
AGGATTCATGGGCAATCTGT+AGG + chr6_2:3208579-3208598 Msa0905180:intron 45.0%
AACCATGCTTCCTGGTAACT+GGG - chr6_2:3208666-3208685 None:intergenic 45.0%
TAACCATGCTTCCTGGTAAC+TGG - chr6_2:3208667-3208686 None:intergenic 45.0%
ACAGAACATGGATCATCAGC+AGG + chr6_2:3208755-3208774 Msa0905180:CDS 45.0%
GACATTTCACTAGTGCAAGG+TGG - chr6_2:3209735-3209754 None:intergenic 45.0%
GTGGACATTTCACTAGTGCA+AGG - chr6_2:3209738-3209757 None:intergenic 45.0%
!!! TTTTTATAAAAGATATATAT+GGG - chr6_2:3207343-3207362 None:intergenic 5.0%
!!! ATTTTTATAAAAGATATATA+TGG - chr6_2:3207344-3207363 None:intergenic 5.0%
!!! ATATATCTTTTATAAAAATA+TGG + chr6_2:3207345-3207364 Msa0905180:intron 5.0%
GTGGGATGAAAACGAAAGCC+AGG - chr6_2:3207016-3207035 None:intergenic 50.0%
CCCACAGATGAAGAGCTTGT+TGG + chr6_2:3207031-3207050 Msa0905180:CDS 50.0%
!! GCTGGATTTTGGAAGGCAAC+TGG + chr6_2:3207863-3207882 Msa0905180:CDS 50.0%
GGAAGGCAACTGGAACTGAT+AGG + chr6_2:3207873-3207892 Msa0905180:CDS 50.0%
CTGGTAACTGGGAGATCCAA+GGG - chr6_2:3208655-3208674 None:intergenic 50.0%
CCTGGTAACTGGGAGATCCA+AGG - chr6_2:3208656-3208675 None:intergenic 55.0%
CCTTGGATCTCCCAGTTACC+AGG + chr6_2:3208653-3208672 Msa0905180:CDS 55.0%
CTCCCAGTTACCAGGAAGCA+TGG + chr6_2:3208661-3208680 Msa0905180:CDS 55.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 3206965 3209788 3206965 ID=Msa0905180;Name=Msa0905180
chr6_2 mRNA 3206965 3209788 3206965 ID=Msa0905180-mRNA-1;Parent=Msa0905180;Name=Msa0905180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|390
chr6_2 exon 3206965 3207148 3206965 ID=Msa0905180-mRNA-1:exon:989;Parent=Msa0905180-mRNA-1
chr6_2 exon 3207768 3208072 3207768 ID=Msa0905180-mRNA-1:exon:990;Parent=Msa0905180-mRNA-1
chr6_2 exon 3208581 3208792 3208581 ID=Msa0905180-mRNA-1:exon:991;Parent=Msa0905180-mRNA-1
chr6_2 exon 3209317 3209788 3209317 ID=Msa0905180-mRNA-1:exon:992;Parent=Msa0905180-mRNA-1
chr6_2 CDS 3206965 3207148 3206965 ID=Msa0905180-mRNA-1:cds;Parent=Msa0905180-mRNA-1
chr6_2 CDS 3207768 3208072 3207768 ID=Msa0905180-mRNA-1:cds;Parent=Msa0905180-mRNA-1
chr6_2 CDS 3208581 3208792 3208581 ID=Msa0905180-mRNA-1:cds;Parent=Msa0905180-mRNA-1
chr6_2 CDS 3209317 3209788 3209317 ID=Msa0905180-mRNA-1:cds;Parent=Msa0905180-mRNA-1
Gene Sequence

>Msa0905180

ATGGAGGAAAGAACTGAGATGGATATTAACAAGGTTGATGATTTGATGCCTGGCTTTCGTTTTCATCCCACAGATGAAGAGCTTGTTGGTTTTTACCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTTATTAAGCAAGTGGATATTTACAAACATGATCCATGGGACCTTCCAAAAGAGCTAGCAAGTAGTGGTGAAAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAACAGTTCAAGACCTAATAGAGTTACAAGAGCTGGATTTTGGAAGGCAACTGGAACTGATAGGCCTATATATTCATCAGATGGAAAATGCATTGGTTTGAAGAAGTCACTTGTCTTCTATAAGGGTAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGCTACCTTGCATTTCAGATTCAAACACTCCTCCTAAAAAGTTTTCAGATAAAAGTTTCTCCCCAAATGATTCATGGGCAATCTGTAGGATCTTCAAGAAAACCAATTCCCTTTCCATGGTACAAAAAGCATTGTCTCACCCTTGGATCTCCCAGTTACCAGGAAGCATGGTTAATGAATTACTCACACAAACTACAAACATCAACCAACTCTGTTCAGAAAATAATATCTCATGCACAACAACAGAACATGGATCATCAGCAGGAACAAACTTACAAATCAACAAGCATGAGCTACAACAAGTCTCCAATACCAACTTCTCAGCTTCAGATTTTCCAAATTACAAACCTATCAACAACATCAACACAATTTCCAAATCCTCACAAATTCCTGTTCCTAATGGAGACATTATTGATAACCTAATGTTCTACACACTTGAAGCCAATGGTTCTACAAAGTGCACAATTGATGATAGTTCAATTCTTTCCAACACTAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTCTCAATTAGTTTACCTCAAGATATGCAACCAAACATTGTGAATATTCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCATTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACTAGTGTTACATGGGACTCACCACCTTGCACTAGTGAAATGTCCACAACCTATGTCACTAGTAAATGTTACACTTAG
Protein sequence

>Msa0905180

MEERTEMDINKVDDLMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKHDPWDLPKELASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCISDSNTPPKKFSDKSFSPNDSWAICRIFKKTNSLSMVQKALSHPWISQLPGSMVNELLTQTTNINQLCSENNISCTTTEHGSSAGTNLQINKHELQQVSNTNFSASDFPNYKPINNINTISKSSQIPVPNGDIIDNLMFYTLEANGSTKCTIDDSSILSNTNYIGFEDANNQYNGFSISLPQDMQPNIVNIQDQMQLNQWENLGRTIEFPFNLSPSFDALRTSVTWDSPPCTSEMSTTYVTSKCYT*