Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910880 | RHN51754.1 | 83.333 | 732 | 64 | 7 | 71 | 796 | 22 | 701 | 0.0 | 1198 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910880 | sp|Q9SSE9|JMJ25_ARATH | 48.757 | 523 | 200 | 10 | 276 | 794 | 415 | 873 | 1.20e-150 | 471 |
Msa0910880 | sp|Q9SSE9|JMJ25_ARATH | 40.909 | 132 | 77 | 1 | 118 | 249 | 210 | 340 | 9.54e-24 | 111 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0910880 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910880 | MtrunA17_Chr6g0472441 | 83.333 | 732 | 64 | 7 | 71 | 796 | 22 | 701 | 0.0 | 1198 |
Msa0910880 | MtrunA17_Chr5g0420361 | 71.287 | 808 | 160 | 8 | 31 | 796 | 2 | 779 | 0.0 | 1100 |
Msa0910880 | MtrunA17_Chr1g0183311 | 64.552 | 725 | 201 | 10 | 123 | 832 | 205 | 888 | 0.0 | 921 |
Msa0910880 | MtrunA17_Chr1g0211711 | 66.911 | 683 | 173 | 10 | 118 | 796 | 399 | 1032 | 0.0 | 912 |
Msa0910880 | MtrunA17_Chr5g0426961 | 63.487 | 671 | 178 | 10 | 130 | 796 | 209 | 816 | 0.0 | 808 |
Msa0910880 | MtrunA17_Chr1g0211661 | 60.095 | 634 | 192 | 9 | 126 | 755 | 289 | 865 | 0.0 | 735 |
Msa0910880 | MtrunA17_Chr1g0211691 | 62.479 | 589 | 163 | 9 | 125 | 703 | 405 | 945 | 0.0 | 711 |
Msa0910880 | MtrunA17_Chr5g0448301 | 47.840 | 648 | 249 | 13 | 83 | 725 | 68 | 631 | 0.0 | 541 |
Msa0910880 | MtrunA17_Chr2g0289121 | 43.567 | 684 | 287 | 18 | 122 | 796 | 210 | 803 | 5.71e-161 | 489 |
Msa0910880 | MtrunA17_Chr7g0275771 | 40.972 | 720 | 329 | 19 | 144 | 796 | 218 | 908 | 1.89e-158 | 486 |
Msa0910880 | MtrunA17_Chr4g0075261 | 41.618 | 680 | 316 | 19 | 132 | 796 | 235 | 848 | 5.57e-151 | 465 |
Msa0910880 | MtrunA17_Chr2g0289031 | 49.639 | 415 | 158 | 9 | 388 | 796 | 8 | 377 | 2.70e-117 | 361 |
Msa0910880 | MtrunA17_Chr1g0192011 | 32.227 | 723 | 382 | 17 | 139 | 842 | 341 | 974 | 2.28e-106 | 350 |
Msa0910880 | MtrunA17_Chr2g0281051 | 33.573 | 694 | 376 | 20 | 144 | 796 | 289 | 938 | 1.65e-95 | 320 |
Msa0910880 | MtrunA17_Chr1g0147021 | 41.423 | 478 | 221 | 12 | 136 | 605 | 940 | 1366 | 1.12e-91 | 317 |
Msa0910880 | MtrunA17_Chr1g0147021 | 64.706 | 153 | 53 | 1 | 644 | 796 | 1528 | 1679 | 7.26e-55 | 206 |
Msa0910880 | MtrunA17_Chr4g0048531 | 34.643 | 560 | 291 | 18 | 286 | 796 | 727 | 1260 | 1.44e-83 | 291 |
Msa0910880 | MtrunA17_Chr4g0048531 | 41.250 | 80 | 46 | 1 | 144 | 223 | 347 | 425 | 2.05e-12 | 71.2 |
Msa0910880 | MtrunA17_Chr8g0364421 | 44.280 | 271 | 98 | 6 | 178 | 448 | 10 | 227 | 1.80e-60 | 204 |
Msa0910880 | MtrunA17_Chr1g0211701 | 63.504 | 137 | 34 | 2 | 701 | 837 | 4 | 124 | 4.64e-51 | 176 |
Msa0910880 | MtrunA17_Chr2g0289091 | 71.171 | 111 | 32 | 0 | 667 | 777 | 310 | 420 | 2.44e-49 | 180 |
Msa0910880 | MtrunA17_Chr2g0289091 | 52.083 | 144 | 63 | 3 | 462 | 599 | 20 | 163 | 1.28e-36 | 143 |
Msa0910880 | MtrunA17_Chr8g0361381 | 48.947 | 190 | 86 | 6 | 384 | 569 | 26 | 208 | 2.19e-46 | 165 |
Msa0910880 | MtrunA17_Chr7g0231061 | 51.807 | 166 | 76 | 2 | 452 | 613 | 12 | 177 | 1.57e-45 | 162 |
Msa0910880 | MtrunA17_Chr8g0340381 | 55.307 | 179 | 51 | 4 | 486 | 661 | 36 | 188 | 3.47e-42 | 152 |
Msa0910880 | MtrunA17_Chr8g0361391 | 73.864 | 88 | 22 | 1 | 668 | 755 | 51 | 137 | 5.02e-41 | 148 |
Msa0910880 | MtrunA17_Chr2g0289041 | 39.412 | 170 | 92 | 6 | 122 | 288 | 35 | 196 | 1.15e-25 | 105 |
Msa0910880 | MtrunA17_Chr3g0119761 | 55.844 | 77 | 34 | 0 | 555 | 631 | 55 | 131 | 2.78e-17 | 79.0 |
Msa0910880 | MtrunA17_Chr2g0289101 | 36.434 | 129 | 75 | 4 | 195 | 322 | 8 | 130 | 4.88e-17 | 79.3 |
Msa0910880 | MtrunA17_Chr1g0211671 | 67.442 | 43 | 14 | 0 | 754 | 796 | 15 | 57 | 9.03e-14 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910880 | AT1G62310.1 | 45.714 | 665 | 280 | 18 | 143 | 798 | 288 | 880 | 1.61e-177 | 535 |
Msa0910880 | AT1G11950.1 | 44.394 | 660 | 282 | 15 | 143 | 796 | 272 | 852 | 1.05e-172 | 522 |
Msa0910880 | AT1G11950.3 | 44.394 | 660 | 282 | 15 | 143 | 796 | 272 | 852 | 1.05e-172 | 522 |
Msa0910880 | AT4G00990.1 | 41.152 | 712 | 334 | 19 | 128 | 796 | 144 | 813 | 3.88e-158 | 483 |
Msa0910880 | AT3G07610.1 | 48.757 | 523 | 200 | 10 | 276 | 794 | 415 | 873 | 1.22e-151 | 471 |
Msa0910880 | AT3G07610.1 | 40.909 | 132 | 77 | 1 | 118 | 249 | 210 | 340 | 9.69e-25 | 111 |
Msa0910880 | AT3G07610.3 | 46.863 | 542 | 204 | 11 | 276 | 794 | 415 | 895 | 1.28e-144 | 454 |
Msa0910880 | AT3G07610.3 | 40.909 | 132 | 77 | 1 | 118 | 249 | 210 | 340 | 9.21e-25 | 111 |
Msa0910880 | AT1G11950.2 | 41.708 | 609 | 270 | 15 | 143 | 745 | 272 | 801 | 1.31e-141 | 439 |
Msa0910880 | AT4G00990.3 | 38.700 | 677 | 330 | 16 | 128 | 761 | 144 | 778 | 4.16e-137 | 426 |
Msa0910880 | AT4G00990.2 | 39.013 | 669 | 323 | 16 | 128 | 753 | 144 | 770 | 3.57e-136 | 424 |
Msa0910880 | AT1G09060.2 | 31.618 | 680 | 354 | 25 | 139 | 796 | 281 | 871 | 1.23e-80 | 279 |
Msa0910880 | AT1G09060.1 | 31.618 | 680 | 354 | 25 | 139 | 796 | 281 | 871 | 1.23e-80 | 279 |
Msa0910880 | AT1G09060.4 | 31.618 | 680 | 354 | 25 | 139 | 796 | 295 | 885 | 1.53e-80 | 279 |
Msa0910880 | AT1G09060.3 | 31.618 | 680 | 354 | 25 | 139 | 796 | 295 | 885 | 1.53e-80 | 279 |
Msa0910880 | AT3G07610.2 | 47.039 | 304 | 129 | 8 | 276 | 575 | 415 | 690 | 5.35e-71 | 249 |
Msa0910880 | AT3G07610.2 | 40.909 | 132 | 77 | 1 | 118 | 249 | 210 | 340 | 2.34e-24 | 109 |
Msa0910880 | AT4G21430.1 | 36.215 | 428 | 249 | 13 | 378 | 796 | 484 | 896 | 9.91e-68 | 243 |
Find 165 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATCTAATTCTCTTAAATA+TGG | 0.219846 | 6_2:+15962327 | None:intergenic |
ATCGACTTTACCTGCTTTAT+AGG | 0.238576 | 6_2:+15959435 | None:intergenic |
TTCAGATATTCATTCAATTT+AGG | 0.248120 | 6_2:+15959495 | None:intergenic |
CATATAGCAGTTTCAAAATC+TGG | 0.251540 | 6_2:-15958190 | Msa0910880:CDS |
TTACATTCATTATTAGCTTT+TGG | 0.259405 | 6_2:+15961418 | None:intergenic |
ATATCATCTTCCTTCTTAAC+AGG | 0.276535 | 6_2:+15961202 | None:intergenic |
ATATCATCTTCCTTCTTAAC+AGG | 0.276535 | 6_2:+15961256 | None:intergenic |
AGTACGTTGCTGACAATTAC+AGG | 0.277570 | 6_2:+15961046 | None:intergenic |
AGCATGAGATTCAATTTCTA+TGG | 0.285636 | 6_2:+15961513 | None:intergenic |
CTCTTTATCTTCAAGTTTAA+CGG | 0.287927 | 6_2:+15961312 | None:intergenic |
CTTCGTCGTGGGGAGCTTCT+AGG | 0.301830 | 6_2:-15961616 | Msa0910880:CDS |
ATGCAATTGATTGCTTAAAT+TGG | 0.315470 | 6_2:-15960925 | Msa0910880:CDS |
AATGTGAACGATTTCTTTAC+CGG | 0.331440 | 6_2:-15960753 | Msa0910880:CDS |
ATGATTGTTAGTGAGATAAA+AGG | 0.342261 | 6_2:+15959248 | None:intergenic |
CTCAATGTCATGATCATTGT+TGG | 0.344575 | 6_2:+15962380 | None:intergenic |
ACCAACTCAGAGATGCAATT+TGG | 0.347462 | 6_2:+15961361 | None:intergenic |
AGTCCCATCTGAACATTATC+AGG | 0.349044 | 6_2:+15960552 | None:intergenic |
CAGTATACTTCACCTATTGT+TGG | 0.352449 | 6_2:-15958154 | Msa0910880:CDS |
TCTGTGGAACAGTGATTTAC+TGG | 0.354305 | 6_2:+15958345 | None:intergenic |
AGTGATTTACTGGAAGTTTA+CGG | 0.362091 | 6_2:+15958355 | None:intergenic |
ATTCATGAATGGTCAAAATC+TGG | 0.368446 | 6_2:-15961475 | Msa0910880:CDS |
GTTTCTTCTTCTTTGTCGCT+AGG | 0.377288 | 6_2:+15962934 | None:intergenic |
AAGAGGCTTAAGGAGGAGTA+TGG | 0.378678 | 6_2:-15959222 | Msa0910880:intron |
GATGGTAGAGATTCAGTATC+TGG | 0.380558 | 6_2:-15962972 | Msa0910880:CDS |
CAAGAAAAGAGGGAGCTTCT+TGG | 0.380981 | 6_2:-15959738 | Msa0910880:CDS |
CCTGCCGTTTAAAGAATATA+CGG | 0.386381 | 6_2:-15960613 | Msa0910880:CDS |
TTCTTTACCGGGTACACAAA+TGG | 0.390751 | 6_2:-15960741 | Msa0910880:CDS |
TACTAATCACAATTCAGTTT+CGG | 0.391063 | 6_2:-15960954 | Msa0910880:CDS |
TGCTCATCTGAAGCAGTTAC+GGG | 0.392512 | 6_2:+15959663 | None:intergenic |
TTCAATGGCACTGGAGAAAA+GGG | 0.397011 | 6_2:-15961072 | Msa0910880:CDS |
TTTCAATGGCACTGGAGAAA+AGG | 0.401004 | 6_2:-15961073 | Msa0910880:CDS |
TTGTGCCAAAGAGAAGAAAA+AGG | 0.402894 | 6_2:-15962727 | Msa0910880:CDS |
TCTGTGGTAGTCAAATATTA+AGG | 0.404685 | 6_2:+15961687 | None:intergenic |
TTAGAGAATGATGAAGAAAC+TGG | 0.411838 | 6_2:-15962876 | Msa0910880:CDS |
TTGCTCATCTGAAGCAGTTA+CGG | 0.413932 | 6_2:+15959662 | None:intergenic |
ATCTCTACCATCCAGCTTCA+AGG | 0.416012 | 6_2:+15962983 | None:intergenic |
GGAGCTTCTTGGTGATAATC+AGG | 0.416631 | 6_2:-15959727 | Msa0910880:CDS |
ACACAAATGGTCGCAAAGAT+AGG | 0.417742 | 6_2:-15960728 | Msa0910880:CDS |
CTGTTCCACAGAGGACAAAT+TGG | 0.419919 | 6_2:-15958334 | Msa0910880:CDS |
TGCAGATCCAGTTGAGTTTG+AGG | 0.420901 | 6_2:-15961590 | Msa0910880:CDS |
AGAGAAGAAAACGGAAAAGA+AGG | 0.423754 | 6_2:-15962681 | Msa0910880:CDS |
TTTGACCATTCATGAATCTC+AGG | 0.426830 | 6_2:+15961481 | None:intergenic |
AGAGAGTAATGCAGAGAAGA+AGG | 0.427096 | 6_2:-15962904 | Msa0910880:CDS |
TTGATAACCTCAAACTCAAC+TGG | 0.427926 | 6_2:+15961583 | None:intergenic |
AGGAAAATCGAGGTAGGAAA+AGG | 0.431979 | 6_2:-15962773 | Msa0910880:CDS |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_2:+15961178 | None:intergenic |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_2:+15961232 | None:intergenic |
CCGTATATTCTTTAAACGGC+AGG | 0.445386 | 6_2:+15960613 | None:intergenic |
CAATCATAAGAAGAGGCTTA+AGG | 0.445426 | 6_2:-15959232 | Msa0910880:CDS |
GGATCCGTATATTCTTTAAA+CGG | 0.445427 | 6_2:+15960609 | None:intergenic |
GCAGTTTCAAAATCTGGGCC+TGG | 0.451365 | 6_2:-15958184 | Msa0910880:CDS |
GTCCATGGCTTCCTTGAAGC+TGG | 0.451536 | 6_2:-15962994 | None:intergenic |
AAAGAGGAGACTCTTGATAA+TGG | 0.452433 | 6_2:-15961295 | Msa0910880:CDS |
GCTAATAATGAATGTAATCA+TGG | 0.455983 | 6_2:-15961412 | Msa0910880:CDS |
GACAAAATCAAGTGCAACCT+TGG | 0.456526 | 6_2:+15958422 | None:intergenic |
GGTAGTCAAATATTAAGGTT+TGG | 0.456642 | 6_2:+15961692 | None:intergenic |
AAGGTATTTCAGCATATACT+TGG | 0.472386 | 6_2:+15962353 | None:intergenic |
AAAGACCAAAGAGAAGAAAA+CGG | 0.474723 | 6_2:-15962690 | Msa0910880:CDS |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_2:-15961187 | Msa0910880:CDS |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_2:-15961241 | Msa0910880:CDS |
GTACTTGAATCAAGCACATC+TGG | 0.479758 | 6_2:-15961028 | Msa0910880:CDS |
CACGGATTCGAGTTCCACTT+TGG | 0.480355 | 6_2:+15959803 | None:intergenic |
GAGATAGAAGCCAAGATTCA+AGG | 0.481462 | 6_2:-15962285 | Msa0910880:intron |
CAAGCACATCTGGTATAAGC+TGG | 0.481486 | 6_2:-15961018 | Msa0910880:CDS |
ATATAGCAGTTTCAAAATCT+GGG | 0.484083 | 6_2:-15958189 | Msa0910880:CDS |
GCTTGATGCGGTAGAAAAGT+TGG | 0.486404 | 6_2:-15957721 | Msa0910880:intron |
GCCAAATTGCATCTCTGAGT+TGG | 0.487551 | 6_2:-15961362 | Msa0910880:CDS |
GAAACTTGATTGCATGCATA+AGG | 0.491153 | 6_2:-15962637 | Msa0910880:intron |
GACTTGTAGGAATTGAGCCT+TGG | 0.491834 | 6_2:-15959112 | Msa0910880:intron |
CGGAGCAGCAGCGGAGACAA+AGG | 0.495455 | 6_2:+15961641 | None:intergenic |
TTTCTTCTTCTTTGTCGCTA+GGG | 0.496852 | 6_2:+15962935 | None:intergenic |
AAGCTCCCCACGACGAAGCT+CGG | 0.497059 | 6_2:+15961621 | None:intergenic |
CTAAAGATCAGTGTGCATAC+TGG | 0.497463 | 6_2:-15961813 | Msa0910880:intron |
CAGTTTCAAAATCTGGGCCT+GGG | 0.498509 | 6_2:-15958183 | Msa0910880:CDS |
TGATTGCTTAAATTGGTGCC+AGG | 0.502959 | 6_2:-15960918 | Msa0910880:intron |
GGAACAAGTAGTGAAGAAGA+AGG | 0.503069 | 6_2:-15962793 | Msa0910880:CDS |
GCTGCTCCGAGCTTCGTCGT+GGG | 0.506497 | 6_2:-15961627 | Msa0910880:CDS |
AAATGAAAGTGCACTAGTCA+TGG | 0.509200 | 6_2:-15959619 | Msa0910880:CDS |
GCAAAATAGTGTTCGAGTCA+TGG | 0.509831 | 6_2:-15959643 | Msa0910880:CDS |
TCAAGAACAAATTGCTGAGA+AGG | 0.511113 | 6_2:-15962307 | Msa0910880:CDS |
CGTTAAACTTGAAGATAAAG+AGG | 0.512697 | 6_2:-15961311 | Msa0910880:CDS |
CATGCAGATAATCTTGCCCT+TGG | 0.516962 | 6_2:+15961560 | None:intergenic |
ATTCTCTTAAATATGGAAGA+AGG | 0.523817 | 6_2:+15962334 | None:intergenic |
TTCATGAATGGTCAAAATCT+GGG | 0.525657 | 6_2:-15961474 | Msa0910880:CDS |
GGGTGGCATGCCGGCAGTGA+TGG | 0.529308 | 6_2:-15961454 | Msa0910880:CDS |
GACGAAGCTCGGAGCAGCAG+CGG | 0.530073 | 6_2:+15961632 | None:intergenic |
AAAGAAGGAGAAGAAAATGC+TGG | 0.532359 | 6_2:-15962666 | Msa0910880:CDS |
TCAAAATCTGGGTGGCATGC+CGG | 0.534124 | 6_2:-15961463 | Msa0910880:CDS |
ACTTGATGAGGACAACCAGC+TGG | 0.534166 | 6_2:+15959053 | None:intergenic |
ATGGCTTCCTTGAAGCTGGA+TGG | 0.538417 | 6_2:-15962990 | Msa0910880:CDS |
TTTGTCTCTCCTGAAAATGT+TGG | 0.538770 | 6_2:-15958405 | Msa0910880:CDS |
AGGTTAAGAGCAGCTTTGAA+AGG | 0.541086 | 6_2:+15960588 | None:intergenic |
AGCATGACTTTGCCAACAAT+AGG | 0.541842 | 6_2:+15958142 | None:intergenic |
GCACCTTGAGCAAGAAAAGA+GGG | 0.542252 | 6_2:-15959748 | Msa0910880:CDS |
CTAGTCATGGAAAATGAAAG+TGG | 0.543959 | 6_2:-15959606 | Msa0910880:CDS |
CTTAATTGCAGTAATACTCA+CGG | 0.545152 | 6_2:+15959785 | None:intergenic |
TGAGATAAAAGGTCTGATCA+TGG | 0.546504 | 6_2:+15959259 | None:intergenic |
CTGCTCCGAGCTTCGTCGTG+GGG | 0.547255 | 6_2:-15961626 | Msa0910880:CDS |
ATGGAGAGACCAATGTTGAC+AGG | 0.554177 | 6_2:-15959704 | Msa0910880:CDS |
ATAAAAGGTCTGATCATGGA+TGG | 0.557609 | 6_2:+15959263 | None:intergenic |
AGCACCTTGAGCAAGAAAAG+AGG | 0.558038 | 6_2:-15959749 | Msa0910880:CDS |
AATGATGAAGAAACTGGTAA+AGG | 0.559773 | 6_2:-15962870 | Msa0910880:CDS |
TTTGCGACCATTTGTGTACC+CGG | 0.561602 | 6_2:+15960734 | None:intergenic |
CGTATATTCTTTAAACGGCA+GGG | 0.561613 | 6_2:+15960614 | None:intergenic |
GTCGCAAAGATAGGCTCGAT+TGG | 0.561745 | 6_2:-15960719 | Msa0910880:CDS |
TTCAGATTTCTGACTTGATG+AGG | 0.562161 | 6_2:+15959041 | None:intergenic |
GCGGATGCTACCATCACTGC+CGG | 0.564083 | 6_2:+15961444 | None:intergenic |
CTATTGCTCTCCTATAAAGC+AGG | 0.564329 | 6_2:-15959445 | Msa0910880:intron |
ATCCAGCTTCAAGGAAGCCA+TGG | 0.565808 | 6_2:+15962992 | None:intergenic |
AGAAGAAGGAAAATCGAGGT+AGG | 0.566155 | 6_2:-15962779 | Msa0910880:CDS |
AACTCAGAGATGCAATTTGG+CGG | 0.567921 | 6_2:+15961364 | None:intergenic |
TGCTGCTCCGAGCTTCGTCG+TGG | 0.568280 | 6_2:-15961628 | Msa0910880:CDS |
TCTTTCAATTTCAATAGTTG+AGG | 0.569152 | 6_2:+15960696 | None:intergenic |
TCATCAAGTCAGAAATCTGA+AGG | 0.570021 | 6_2:-15959039 | Msa0910880:intron |
TCACTAACAATCATAAGAAG+AGG | 0.571805 | 6_2:-15959239 | Msa0910880:CDS |
TATCAGGCAGCTTCAAAGCA+AGG | 0.573948 | 6_2:+15960568 | None:intergenic |
CTGCCTGATAATGTTCAGAT+GGG | 0.580666 | 6_2:-15960555 | Msa0910880:CDS |
CTCAGCCTGAGATTCATGAA+TGG | 0.580958 | 6_2:-15961486 | Msa0910880:CDS |
GCTGCCTGATAATGTTCAGA+TGG | 0.581979 | 6_2:-15960556 | Msa0910880:CDS |
ATTATCAAGCCTGTCAACAT+TGG | 0.582130 | 6_2:+15959695 | None:intergenic |
AGTTTCAAAATCTGGGCCTG+GGG | 0.583535 | 6_2:-15958182 | Msa0910880:CDS |
AGTTTGAGGTTATCAACCAA+GGG | 0.590691 | 6_2:-15961576 | Msa0910880:CDS |
AAGCACATCTGGTATAAGCT+GGG | 0.598444 | 6_2:-15961017 | Msa0910880:CDS |
GAAGCAGTTACGGGAGAAGA+CGG | 0.599610 | 6_2:+15959672 | None:intergenic |
AAGTGGATCATGTGATATGA+AGG | 0.602990 | 6_2:-15959589 | Msa0910880:CDS |
TACCTCCAATTTGTCCTCTG+TGG | 0.606074 | 6_2:+15958329 | None:intergenic |
TAAAAGGTCTGATCATGGAT+GGG | 0.606358 | 6_2:+15959264 | None:intergenic |
GGTCAGTGATTGCAAACTTG+AGG | 0.606819 | 6_2:-15957689 | Msa0910880:CDS |
AGATCTGCAAAATCATGAGA+AGG | 0.607799 | 6_2:-15961107 | Msa0910880:CDS |
CGGCAGGGATGATATGAGCT+CGG | 0.608155 | 6_2:+15960629 | None:intergenic |
CTTCTTGGTGATAATCAGGA+TGG | 0.608495 | 6_2:-15959723 | Msa0910880:CDS |
CAAGGGCAAGATTATCTGCA+TGG | 0.609642 | 6_2:-15961559 | Msa0910880:CDS |
ATGTGAACGATTTCTTTACC+GGG | 0.609890 | 6_2:-15960752 | Msa0910880:CDS |
TTCCACAGAGGACAAATTGG+AGG | 0.610429 | 6_2:-15958331 | Msa0910880:intron |
GCTGGGAACCGCTTGTCATG+TGG | 0.613386 | 6_2:-15961000 | Msa0910880:CDS |
AGCTTCTGAACAAAACTCCA+AGG | 0.613881 | 6_2:+15959095 | None:intergenic |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_2:-15961179 | Msa0910880:CDS |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_2:-15961233 | Msa0910880:CDS |
ATCACAATGGAGCTCTGTCA+CGG | 0.619167 | 6_2:+15960479 | None:intergenic |
GAGTTTGAGGTTATCAACCA+AGG | 0.622153 | 6_2:-15961577 | Msa0910880:CDS |
TAGAAAAGTTGGAGAAAGCA+AGG | 0.626408 | 6_2:-15957710 | Msa0910880:CDS |
GTTGACTCATATTGCCAAAG+TGG | 0.626432 | 6_2:-15959817 | Msa0910880:CDS |
GTGAAGAAGAAGGAAAATCG+AGG | 0.626702 | 6_2:-15962783 | Msa0910880:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_2:-15961186 | Msa0910880:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_2:-15961240 | Msa0910880:CDS |
TCATAAGAAGAGGCTTAAGG+AGG | 0.634907 | 6_2:-15959229 | Msa0910880:CDS |
CGAGTGCTTGCGTTATACAG+AGG | 0.635315 | 6_2:-15958382 | Msa0910880:CDS |
GCGACAAAGAAGAAGAAACA+TGG | 0.635439 | 6_2:-15962930 | Msa0910880:CDS |
GAGTAATGCAGAGAAGAAGG+AGG | 0.638495 | 6_2:-15962901 | Msa0910880:CDS |
GATTGCAAACTTGAGGCGAA+AGG | 0.644413 | 6_2:-15957682 | Msa0910880:CDS |
GTTTCAAAATCTGGGCCTGG+GGG | 0.646331 | 6_2:-15958181 | Msa0910880:CDS |
ATGATATGAGCTCGGCACAA+TGG | 0.653122 | 6_2:+15960637 | None:intergenic |
CGTCGTGGGGAGCTTCTAGG+TGG | 0.653994 | 6_2:-15961613 | Msa0910880:CDS |
AATGCATGCCACATGACAAG+CGG | 0.654461 | 6_2:+15960992 | None:intergenic |
TGGATCATGTGATATGAAGG+TGG | 0.679236 | 6_2:-15959586 | Msa0910880:CDS |
TCAATGGCACTGGAGAAAAG+GGG | 0.683003 | 6_2:-15961071 | Msa0910880:CDS |
TTCATGAATCTCAGGCTGAG+CGG | 0.683492 | 6_2:+15961489 | None:intergenic |
ATGAGCTCGGCACAATGGTG+TGG | 0.685553 | 6_2:+15960642 | None:intergenic |
GGGCAAGATTATCTGCATGG+TGG | 0.704928 | 6_2:-15961556 | Msa0910880:CDS |
TTTGTTGCAGTCATGCACCA+AGG | 0.714055 | 6_2:-15958439 | Msa0910880:intron |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_2:-15961182 | Msa0910880:CDS |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_2:-15961236 | Msa0910880:CDS |
ATGAATGGTCAAAATCTGGG+TGG | 0.728185 | 6_2:-15961471 | Msa0910880:CDS |
CTACATCAGACATATCACAA+TGG | 0.728251 | 6_2:+15960466 | None:intergenic |
AGTAAATCACTGTTCCACAG+AGG | 0.760358 | 6_2:-15958343 | Msa0910880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTTCTTAAATTATTTG+TGG | - | chr6_2:15958602-15958621 | Msa0910880:intron | 15.0% |
!!! | GATTGTTTTACATATTTTTA+TGG | - | chr6_2:15960466-15960485 | Msa0910880:intron | 15.0% |
!!! | CGTTTTATCTTTAAATTATT+AGG | + | chr6_2:15960631-15960650 | None:intergenic | 15.0% |
!! | ATGTTGAATTGTTAATAAAA+TGG | + | chr6_2:15961532-15961551 | None:intergenic | 15.0% |
!! | TGTTATGCATGTTATTAATA+AGG | - | chr6_2:15958086-15958105 | Msa0910880:intron | 20.0% |
!! | TGATCTAATTCTCTTAAATA+TGG | + | chr6_2:15958341-15958360 | None:intergenic | 20.0% |
!!! | CATTTTTTTCTTCTTTCTTT+TGG | - | chr6_2:15958688-15958707 | Msa0910880:intron | 20.0% |
!! | GAAATACAAACTTAATCAAA+AGG | + | chr6_2:15958754-15958773 | None:intergenic | 20.0% |
!!! | TTACATTCATTATTAGCTTT+TGG | + | chr6_2:15959250-15959269 | None:intergenic | 20.0% |
!! | ATTAAGAAATTATACAAACC+TGG | + | chr6_2:15959768-15959787 | None:intergenic | 20.0% |
!!! | AAACTTTTCTCAAACAAATT+AGG | + | chr6_2:15960002-15960021 | None:intergenic | 20.0% |
!! | AAAAAATTAAGACATGTACT+TGG | + | chr6_2:15960349-15960368 | None:intergenic | 20.0% |
!!! | AAGTACATGTCTTAATTTTT+TGG | - | chr6_2:15960348-15960367 | Msa0910880:intron | 20.0% |
!!! | TACATATTTTTATGGTGTTT+TGG | - | chr6_2:15960474-15960493 | Msa0910880:CDS | 20.0% |
!! | ATAAGTTGTATCATTAGATA+AGG | - | chr6_2:15960541-15960560 | Msa0910880:CDS | 20.0% |
!!! | TCATTAGATAAGGTATTTTT+TGG | - | chr6_2:15960551-15960570 | Msa0910880:CDS | 20.0% |
!!! | CATCAAGAAAATATTTTAGA+TGG | - | chr6_2:15961113-15961132 | Msa0910880:CDS | 20.0% |
!! | TTCAGATATTCATTCAATTT+AGG | + | chr6_2:15961173-15961192 | None:intergenic | 20.0% |
!!! | AGCTATTGATAACTAAAATA+TGG | - | chr6_2:15961313-15961332 | Msa0910880:CDS | 20.0% |
!!! | ATTGATAACTAAAATATGGT+AGG | - | chr6_2:15961317-15961336 | Msa0910880:CDS | 20.0% |
!!! | TTCTTGAATGACATATATTT+TGG | - | chr6_2:15961361-15961380 | Msa0910880:CDS | 20.0% |
!!! | AAGAACTTTTAACAACTATT+CGG | + | chr6_2:15961798-15961817 | None:intergenic | 20.0% |
!! | ATCTAAATGTCTAAATGATA+TGG | + | chr6_2:15961982-15962001 | None:intergenic | 20.0% |
!! | GGTAAAATATGTTTAATTCA+AGG | + | chr6_2:15962611-15962630 | None:intergenic | 20.0% |
!! | TCAATTACTGAAAATTTGAT+GGG | - | chr6_2:15962684-15962703 | Msa0910880:CDS | 20.0% |
! | TACAAAGAAAAAACTGAAGA+AGG | - | chr6_2:15957851-15957870 | Msa0910880:intron | 25.0% |
! | CATAGTAATAACATCTTTGA+GGG | + | chr6_2:15958114-15958133 | None:intergenic | 25.0% |
! | TCATAGTAATAACATCTTTG+AGG | + | chr6_2:15958115-15958134 | None:intergenic | 25.0% |
! | ATTCTCTTAAATATGGAAGA+AGG | + | chr6_2:15958334-15958353 | None:intergenic | 25.0% |
! | TCTTAAATTATTTGTGGTGT+CGG | - | chr6_2:15958608-15958627 | Msa0910880:intron | 25.0% |
! | GCTAATAATGAATGTAATCA+TGG | - | chr6_2:15959253-15959272 | Msa0910880:CDS | 25.0% |
!! | CTCTTTATCTTCAAGTTTAA+CGG | + | chr6_2:15959356-15959375 | None:intergenic | 25.0% |
!! | ACAGTATAAAAAGTTTTCAC+CGG | + | chr6_2:15959527-15959546 | None:intergenic | 25.0% |
!! | AAAACTTTTTATACTGTCCT+AGG | - | chr6_2:15959530-15959549 | Msa0910880:CDS | 25.0% |
!! | AAACTTTTTATACTGTCCTA+GGG | - | chr6_2:15959531-15959550 | Msa0910880:CDS | 25.0% |
!!! | AGGATTTAAGACATTTTCAA+TGG | - | chr6_2:15959578-15959597 | Msa0910880:CDS | 25.0% |
! | TACTAATCACAATTCAGTTT+CGG | - | chr6_2:15959711-15959730 | Msa0910880:CDS | 25.0% |
! | ATGCAATTGATTGCTTAAAT+TGG | - | chr6_2:15959740-15959759 | Msa0910880:CDS | 25.0% |
! | TCTTTCAATTTCAATAGTTG+AGG | + | chr6_2:15959972-15959991 | None:intergenic | 25.0% |
!! | CTTACTACATATTTTGCTTA+TGG | - | chr6_2:15960134-15960153 | Msa0910880:intron | 25.0% |
!! | ATAAATCTTTTGATGCTTAG+AGG | - | chr6_2:15960269-15960288 | Msa0910880:intron | 25.0% |
!! | AATCAAATGAGTGTTTTCAA+AGG | + | chr6_2:15960383-15960402 | None:intergenic | 25.0% |
! | ACTTGGAACTTCATAAATAT+CGG | + | chr6_2:15960433-15960452 | None:intergenic | 25.0% |
! | ATGAGTTGTATCATTAGATA+AGG | - | chr6_2:15960662-15960681 | Msa0910880:CDS | 25.0% |
! | TGAGTTGTATCATTAGATAA+GGG | - | chr6_2:15960663-15960682 | Msa0910880:CDS | 25.0% |
!!! | CGTTTTGTTTCTTTACAATT+TGG | - | chr6_2:15960809-15960828 | Msa0910880:intron | 25.0% |
!!! | TCTTTACAATTTGGCTTTTT+AGG | - | chr6_2:15960818-15960837 | Msa0910880:intron | 25.0% |
!!! | GACATATATTTTGGTAATGT+AGG | - | chr6_2:15961370-15961389 | Msa0910880:CDS | 25.0% |
! | ATGATTGTTAGTGAGATAAA+AGG | + | chr6_2:15961420-15961439 | None:intergenic | 25.0% |
!! | ATAATTTTTCGTACGTTGTT+TGG | - | chr6_2:15961478-15961497 | Msa0910880:CDS | 25.0% |
!!! | AAAGGTGTAAATTTTCCATA+AGG | - | chr6_2:15961688-15961707 | Msa0910880:CDS | 25.0% |
! | AAGTGTATATGTTGAAGTTA+TGG | - | chr6_2:15961711-15961730 | Msa0910880:intron | 25.0% |
! | TGGATTTCAGATTAAAGAAA+AGG | - | chr6_2:15961731-15961750 | Msa0910880:intron | 25.0% |
! | TGTACAAGTATACAACTATT+AGG | + | chr6_2:15961862-15961881 | None:intergenic | 25.0% |
! | GGAATGTTTAAATGAGAATA+TGG | + | chr6_2:15961888-15961907 | None:intergenic | 25.0% |
! | TCTCATTTAAACATTCCTAA+AGG | - | chr6_2:15961891-15961910 | Msa0910880:intron | 25.0% |
! | ATGAAATTTGACGAAGAATT+TGG | - | chr6_2:15961938-15961957 | Msa0910880:intron | 25.0% |
!! | AGTTCTGATATCTTAGTATT+TGG | - | chr6_2:15962049-15962068 | Msa0910880:intron | 25.0% |
! | GTTCTGATATCTTAGTATTT+GGG | - | chr6_2:15962050-15962069 | Msa0910880:intron | 25.0% |
!!! | TTAATGTTTTAAGTGCATCT+TGG | - | chr6_2:15962107-15962126 | Msa0910880:intron | 25.0% |
! | ATATAGCAGTTTCAAAATCT+GGG | - | chr6_2:15962476-15962495 | Msa0910880:intron | 25.0% |
! | GTCAATTACTGAAAATTTGA+TGG | - | chr6_2:15962683-15962702 | Msa0910880:CDS | 25.0% |
!! | TCGAATTTCTCTTTGAAAAA+AGG | - | chr6_2:15962747-15962766 | Msa0910880:CDS | 25.0% |
! | AATCTGTTGAAATGAAATGA+TGG | + | chr6_2:15962842-15962861 | None:intergenic | 25.0% |
! | TCATTTCAACAGATTCTTAT+TGG | - | chr6_2:15962847-15962866 | Msa0910880:CDS | 25.0% |
TTAGAGAATGATGAAGAAAC+TGG | - | chr6_2:15957789-15957808 | Msa0910880:intron | 30.0% | |
AATGATGAAGAAACTGGTAA+AGG | - | chr6_2:15957795-15957814 | Msa0910880:intron | 30.0% | |
!!! | TTTGTACCACGTTTTTTTCT+TGG | + | chr6_2:15957837-15957856 | None:intergenic | 30.0% |
AAAGACCAAAGAGAAGAAAA+CGG | - | chr6_2:15957975-15957994 | Msa0910880:intron | 30.0% | |
ATGTAGAACACAGAAAACAA+AGG | + | chr6_2:15958205-15958224 | None:intergenic | 30.0% | |
TTCATCATCTTATTCTCTAC+AGG | - | chr6_2:15958241-15958260 | Msa0910880:intron | 30.0% | |
! | AAGGTATTTCAGCATATACT+TGG | + | chr6_2:15958315-15958334 | None:intergenic | 30.0% |
GGAAAAAATACCTTGAATCT+TGG | + | chr6_2:15958393-15958412 | None:intergenic | 30.0% | |
!!! | TTCAAGGTATTTTTTCCTCA+AGG | - | chr6_2:15958396-15958415 | Msa0910880:CDS | 30.0% |
! | TTTCTCTGCCTATGTTTTAT+AGG | - | chr6_2:15958449-15958468 | Msa0910880:intron | 30.0% |
GGTAGTCAAATATTAAGGTT+TGG | + | chr6_2:15958976-15958995 | None:intergenic | 30.0% | |
TCTGTGGTAGTCAAATATTA+AGG | + | chr6_2:15958981-15959000 | None:intergenic | 30.0% | |
AGCATGAGATTCAATTTCTA+TGG | + | chr6_2:15959155-15959174 | None:intergenic | 30.0% | |
ATTCATGAATGGTCAAAATC+TGG | - | chr6_2:15959190-15959209 | Msa0910880:intron | 30.0% | |
TTCATGAATGGTCAAAATCT+GGG | - | chr6_2:15959191-15959210 | Msa0910880:intron | 30.0% | |
CGTTAAACTTGAAGATAAAG+AGG | - | chr6_2:15959354-15959373 | Msa0910880:intron | 30.0% | |
!!! | TTGTTTTAAGCCTGTTAAGA+AGG | - | chr6_2:15959399-15959418 | Msa0910880:intron | 30.0% |
ATATCATCTTCCTTCTTAAC+AGG | + | chr6_2:15959412-15959431 | None:intergenic | 30.0% | |
ATATCATCTTCCTTCTTAAC+AGG | + | chr6_2:15959412-15959431 | None:intergenic | 30.0% | |
!! | TGAGTTGTTGATTTAAATGC+AGG | - | chr6_2:15959881-15959900 | Msa0910880:intron | 30.0% |
!! | GAGTTGTTGATTTAAATGCA+GGG | - | chr6_2:15959882-15959901 | Msa0910880:intron | 30.0% |
AATGTGAACGATTTCTTTAC+CGG | - | chr6_2:15959912-15959931 | Msa0910880:intron | 30.0% | |
! | CTTTTCTCAAACAAATTAGG+AGG | + | chr6_2:15959999-15960018 | None:intergenic | 30.0% |
GGATCCGTATATTCTTTAAA+CGG | + | chr6_2:15960059-15960078 | None:intergenic | 30.0% | |
! | TTTTGCTTATGGATTTTCTG+AGG | - | chr6_2:15960145-15960164 | Msa0910880:intron | 30.0% |
ACTTGGAACTTCATAATTGT+CGG | + | chr6_2:15960332-15960351 | None:intergenic | 30.0% | |
TATGAAGTTCCAAGTTCATT+TGG | - | chr6_2:15960438-15960457 | Msa0910880:intron | 30.0% | |
AATCAACAACCAAATGAACT+TGG | + | chr6_2:15960450-15960469 | None:intergenic | 30.0% | |
! | TCATTAGATAAGGGACTTTT+TGG | - | chr6_2:15960672-15960691 | Msa0910880:CDS | 30.0% |
CTTAATTGCAGTAATACTCA+CGG | + | chr6_2:15960883-15960902 | None:intergenic | 30.0% | |
GAGAAAACAAGAGAAAATGA+AGG | + | chr6_2:15961293-15961312 | None:intergenic | 30.0% | |
TCACTAACAATCATAAGAAG+AGG | - | chr6_2:15961426-15961445 | Msa0910880:CDS | 30.0% | |
!! | ACAATTCAACATTGACTTGT+AGG | - | chr6_2:15961540-15961559 | Msa0910880:CDS | 30.0% |
! | GAAGGTAAATTTTACGTACA+TGG | - | chr6_2:15961644-15961663 | Msa0910880:CDS | 30.0% |
TCAACATATACACTTCCTTA+TGG | + | chr6_2:15961706-15961725 | None:intergenic | 30.0% | |
GGAGAGAATAAATATAACTG+TGG | - | chr6_2:15961752-15961771 | Msa0910880:intron | 30.0% | |
CATTTAAACATTCCTAAAGG+AGG | - | chr6_2:15961894-15961913 | Msa0910880:intron | 30.0% | |
TGATATCTTAGTATTTGGGT+TGG | - | chr6_2:15962054-15962073 | Msa0910880:intron | 30.0% | |
AGTGATTTACTGGAAGTTTA+CGG | + | chr6_2:15962313-15962332 | None:intergenic | 30.0% | |
CATATAGCAGTTTCAAAATC+TGG | - | chr6_2:15962475-15962494 | Msa0910880:intron | 30.0% | |
CGAAATCGTAACACATTTAT+CGG | - | chr6_2:15962554-15962573 | Msa0910880:intron | 30.0% | |
ACTGAAAATTTGATGGGAAT+AGG | - | chr6_2:15962690-15962709 | Msa0910880:CDS | 30.0% | |
ACAGAAATACATACACTAGA+TGG | + | chr6_2:15962801-15962820 | None:intergenic | 30.0% | |
!! | TGTTTTGTGTACTGTTTTTC+TGG | - | chr6_2:15962870-15962889 | Msa0910880:CDS | 30.0% |
TTTCTTCTTCTTTGTCGCTA+GGG | + | chr6_2:15957733-15957752 | None:intergenic | 35.0% | |
TTGTGCCAAAGAGAAGAAAA+AGG | - | chr6_2:15957938-15957957 | Msa0910880:intron | 35.0% | |
! | CTTCACCTTTTTCTTCTCTT+TGG | + | chr6_2:15957946-15957965 | None:intergenic | 35.0% |
AGAGAAGAAAAAGGTGAAGA+AGG | - | chr6_2:15957947-15957966 | Msa0910880:intron | 35.0% | |
! | CTTTTCCGTTTTCTTCTCTT+TGG | + | chr6_2:15957983-15958002 | None:intergenic | 35.0% |
AGAGAAGAAAACGGAAAAGA+AGG | - | chr6_2:15957984-15958003 | Msa0910880:intron | 35.0% | |
AAAGAAGGAGAAGAAAATGC+TGG | - | chr6_2:15957999-15958018 | Msa0910880:intron | 35.0% | |
GAAACTTGATTGCATGCATA+AGG | - | chr6_2:15958028-15958047 | Msa0910880:intron | 35.0% | |
TTACAAATGCCACAACACAA+AGG | + | chr6_2:15958157-15958176 | None:intergenic | 35.0% | |
CTCAATGTCATGATCATTGT+TGG | + | chr6_2:15958288-15958307 | None:intergenic | 35.0% | |
TCAAGAACAAATTGCTGAGA+AGG | - | chr6_2:15958358-15958377 | Msa0910880:CDS | 35.0% | |
GGCAGAGAAAGAAAAAAGAA+AGG | + | chr6_2:15958439-15958458 | None:intergenic | 35.0% | |
GTGTCTGACCTATAAAACAT+AGG | + | chr6_2:15958460-15958479 | None:intergenic | 35.0% | |
TTCAGTGTAGTCATATGTGT+CGG | + | chr6_2:15958570-15958589 | None:intergenic | 35.0% | |
! | TTTCATCTCATGCATGCTTT+TGG | - | chr6_2:15958770-15958789 | Msa0910880:intron | 35.0% |
! | TTCATCTCATGCATGCTTTT+GGG | - | chr6_2:15958771-15958790 | Msa0910880:intron | 35.0% |
!!! | CTTTTGGGATGAACATTACA+GGG | - | chr6_2:15958786-15958805 | Msa0910880:intron | 35.0% |
! | TTGATAACCTCAAACTCAAC+TGG | + | chr6_2:15959085-15959104 | None:intergenic | 35.0% |
! | AGTTTGAGGTTATCAACCAA+GGG | - | chr6_2:15959089-15959108 | Msa0910880:CDS | 35.0% |
TTTGACCATTCATGAATCTC+AGG | + | chr6_2:15959187-15959206 | None:intergenic | 35.0% | |
!!! | CATTATTAGCTTTTGGACAG+CGG | + | chr6_2:15959243-15959262 | None:intergenic | 35.0% |
AAAGAGGAGACTCTTGATAA+TGG | - | chr6_2:15959370-15959389 | Msa0910880:intron | 35.0% | |
ATGATATACCGAATGATCCA+GGG | - | chr6_2:15959425-15959444 | Msa0910880:intron | 35.0% | |
!! | GGTTTTTAAGCCTGTTAAGA+AGG | - | chr6_2:15959453-15959472 | Msa0910880:CDS | 35.0% |
ATGATATACCGAATGATCCA+GGG | - | chr6_2:15959425-15959444 | Msa0910880:intron | 35.0% | |
AGATCTGCAAAATCATGAGA+AGG | - | chr6_2:15959558-15959577 | Msa0910880:CDS | 35.0% | |
! | TAAGACATTTTCAATGGCAC+TGG | - | chr6_2:15959584-15959603 | Msa0910880:CDS | 35.0% |
ATGTGAACGATTTCTTTACC+GGG | - | chr6_2:15959913-15959932 | Msa0910880:intron | 35.0% | |
CGTATATTCTTTAAACGGCA+GGG | + | chr6_2:15960054-15960073 | None:intergenic | 35.0% | |
! | CCTGCCGTTTAAAGAATATA+CGG | - | chr6_2:15960052-15960071 | Msa0910880:intron | 35.0% |
CTACATCAGACATATCACAA+TGG | + | chr6_2:15960202-15960221 | None:intergenic | 35.0% | |
! | CATTCTAGAAAACACAGTTC+AGG | + | chr6_2:15960245-15960264 | None:intergenic | 35.0% |
ATTATCAAGCCTGTCAACAT+TGG | + | chr6_2:15960973-15960992 | None:intergenic | 35.0% | |
! | AAATGAAAGTGCACTAGTCA+TGG | - | chr6_2:15961046-15961065 | Msa0910880:CDS | 35.0% |
CTAGTCATGGAAAATGAAAG+TGG | - | chr6_2:15961059-15961078 | Msa0910880:CDS | 35.0% | |
AAGTGGATCATGTGATATGA+AGG | - | chr6_2:15961076-15961095 | Msa0910880:CDS | 35.0% | |
!! | ATATTTTAGATGGTGCTCTC+TGG | - | chr6_2:15961123-15961142 | Msa0910880:CDS | 35.0% |
!! | TATTTTAGATGGTGCTCTCT+GGG | - | chr6_2:15961124-15961143 | Msa0910880:CDS | 35.0% |
! | ATCGACTTTACCTGCTTTAT+AGG | + | chr6_2:15961233-15961252 | None:intergenic | 35.0% |
TAAAAGGTCTGATCATGGAT+GGG | + | chr6_2:15961404-15961423 | None:intergenic | 35.0% | |
ATAAAAGGTCTGATCATGGA+TGG | + | chr6_2:15961405-15961424 | None:intergenic | 35.0% | |
TGAGATAAAAGGTCTGATCA+TGG | + | chr6_2:15961409-15961428 | None:intergenic | 35.0% | |
CAATCATAAGAAGAGGCTTA+AGG | - | chr6_2:15961433-15961452 | Msa0910880:CDS | 35.0% | |
! | TTCAGATTTCTGACTTGATG+AGG | + | chr6_2:15961627-15961646 | None:intergenic | 35.0% |
TCATCAAGTCAGAAATCTGA+AGG | - | chr6_2:15961626-15961645 | Msa0910880:CDS | 35.0% | |
GCCAAGTTCTTAAAAGTTTG+AGG | - | chr6_2:15961832-15961851 | Msa0910880:CDS | 35.0% | |
!! | GCCTCAAACTTTTAAGAACT+TGG | + | chr6_2:15961836-15961855 | None:intergenic | 35.0% |
TTAAACATTCCTAAAGGAGG+CGG | - | chr6_2:15961897-15961916 | Msa0910880:intron | 35.0% | |
ACATAAAAGTGATGAGCTAG+TGG | + | chr6_2:15962146-15962165 | None:intergenic | 35.0% | |
TTTGTCTCTCCTGAAAATGT+TGG | - | chr6_2:15962260-15962279 | Msa0910880:intron | 35.0% | |
!! | GGTATTCTAGACTACTTTTC+TGG | - | chr6_2:15962355-15962374 | Msa0910880:CDS | 35.0% |
CAGTATACTTCACCTATTGT+TGG | - | chr6_2:15962511-15962530 | Msa0910880:intron | 35.0% | |
TTTACCATCTAGATTCTGCA+AGG | - | chr6_2:15962625-15962644 | Msa0910880:intron | 35.0% | |
TTACAATGCAGTTACTAGAG+CGG | + | chr6_2:15962662-15962681 | None:intergenic | 35.0% | |
TAGAAAAGTTGGAGAAAGCA+AGG | - | chr6_2:15962955-15962974 | Msa0910880:CDS | 35.0% | |
GATGGTAGAGATTCAGTATC+TGG | - | chr6_2:15957693-15957712 | Msa0910880:CDS | 40.0% | |
GTTTCTTCTTCTTTGTCGCT+AGG | + | chr6_2:15957734-15957753 | None:intergenic | 40.0% | |
GCGACAAAGAAGAAGAAACA+TGG | - | chr6_2:15957735-15957754 | Msa0910880:intron | 40.0% | |
AGAGAGTAATGCAGAGAAGA+AGG | - | chr6_2:15957761-15957780 | Msa0910880:intron | 40.0% | |
AGCGATCCAAGAAAAAAACG+TGG | - | chr6_2:15957828-15957847 | Msa0910880:intron | 40.0% | |
GGAACAAGTAGTGAAGAAGA+AGG | - | chr6_2:15957872-15957891 | Msa0910880:intron | 40.0% | |
GTGAAGAAGAAGGAAAATCG+AGG | - | chr6_2:15957882-15957901 | Msa0910880:intron | 40.0% | |
AGAAGAAGGAAAATCGAGGT+AGG | - | chr6_2:15957886-15957905 | Msa0910880:intron | 40.0% | |
AGGAAAATCGAGGTAGGAAA+AGG | - | chr6_2:15957892-15957911 | Msa0910880:intron | 40.0% | |
GAGATAGAAGCCAAGATTCA+AGG | - | chr6_2:15958380-15958399 | Msa0910880:CDS | 40.0% | |
TTTATAGGTCAGACACTCCT+CGG | - | chr6_2:15958464-15958483 | Msa0910880:intron | 40.0% | |
!! | AATTATTTGTGGTGTCGGTG+TGG | - | chr6_2:15958613-15958632 | Msa0910880:intron | 40.0% |
!!! | GCTTTTGGGATGAACATTAC+AGG | - | chr6_2:15958785-15958804 | Msa0910880:intron | 40.0% |
CTAAAGATCAGTGTGCATAC+TGG | - | chr6_2:15958852-15958871 | Msa0910880:intron | 40.0% | |
ACTGGTAGGGACTTATGATT+TGG | - | chr6_2:15958870-15958889 | Msa0910880:intron | 40.0% | |
! | AGCATTTTGTACAGCTTCTG+TGG | + | chr6_2:15958997-15959016 | None:intergenic | 40.0% |
! | GAGTTTGAGGTTATCAACCA+AGG | - | chr6_2:15959088-15959107 | Msa0910880:CDS | 40.0% |
ATGAATGGTCAAAATCTGGG+TGG | - | chr6_2:15959194-15959213 | Msa0910880:intron | 40.0% | |
AACTCAGAGATGCAATTTGG+CGG | + | chr6_2:15959304-15959323 | None:intergenic | 40.0% | |
ACCAACTCAGAGATGCAATT+TGG | + | chr6_2:15959307-15959326 | None:intergenic | 40.0% | |
GATGATATACCGAATGATCC+AGG | - | chr6_2:15959424-15959443 | Msa0910880:intron | 40.0% | |
GATGATATACCGAATGATCC+AGG | - | chr6_2:15959424-15959443 | Msa0910880:intron | 40.0% | |
! | GTGGTTTTTCGTGAAGATTC+CGG | - | chr6_2:15959505-15959524 | Msa0910880:CDS | 40.0% |
! | TTTTGCAGATCTATAGCCCT+AGG | + | chr6_2:15959550-15959569 | None:intergenic | 40.0% |
! | TTTCAATGGCACTGGAGAAA+AGG | - | chr6_2:15959592-15959611 | Msa0910880:CDS | 40.0% |
! | TTCAATGGCACTGGAGAAAA+GGG | - | chr6_2:15959593-15959612 | Msa0910880:CDS | 40.0% |
AGTACGTTGCTGACAATTAC+AGG | + | chr6_2:15959622-15959641 | None:intergenic | 40.0% | |
GTACTTGAATCAAGCACATC+TGG | - | chr6_2:15959637-15959656 | Msa0910880:CDS | 40.0% | |
AAGCACATCTGGTATAAGCT+GGG | - | chr6_2:15959648-15959667 | Msa0910880:CDS | 40.0% | |
! | TGATTGCTTAAATTGGTGCC+AGG | - | chr6_2:15959747-15959766 | Msa0910880:CDS | 40.0% |
ATCAGTCATCTGAGAAGTTC+AGG | + | chr6_2:15959791-15959810 | None:intergenic | 40.0% | |
TTCTTTACCGGGTACACAAA+TGG | - | chr6_2:15959924-15959943 | Msa0910880:intron | 40.0% | |
ACACAAATGGTCGCAAAGAT+AGG | - | chr6_2:15959937-15959956 | Msa0910880:intron | 40.0% | |
CCGTATATTCTTTAAACGGC+AGG | + | chr6_2:15960055-15960074 | None:intergenic | 40.0% | |
!! | AGGTTAAGAGCAGCTTTGAA+AGG | + | chr6_2:15960080-15960099 | None:intergenic | 40.0% |
! | CTGCCTGATAATGTTCAGAT+GGG | - | chr6_2:15960110-15960129 | Msa0910880:intron | 40.0% |
AGTCCCATCTGAACATTATC+AGG | + | chr6_2:15960116-15960135 | None:intergenic | 40.0% | |
!! | TATGGATTTTCTGAGGAGCT+TGG | - | chr6_2:15960152-15960171 | Msa0910880:intron | 40.0% |
!! | ATGGATTTTCTGAGGAGCTT+GGG | - | chr6_2:15960153-15960172 | Msa0910880:intron | 40.0% |
GATGTGTACAACGTCTTTGT+AGG | - | chr6_2:15960291-15960310 | Msa0910880:intron | 40.0% | |
! | GTTGACTCATATTGCCAAAG+TGG | - | chr6_2:15960848-15960867 | Msa0910880:intron | 40.0% |
! | CTTCTTGGTGATAATCAGGA+TGG | - | chr6_2:15960942-15960961 | Msa0910880:CDS | 40.0% |
! | TTGCTCATCTGAAGCAGTTA+CGG | + | chr6_2:15961006-15961025 | None:intergenic | 40.0% |
GCAAAATAGTGTTCGAGTCA+TGG | - | chr6_2:15961022-15961041 | Msa0910880:CDS | 40.0% | |
TGGATCATGTGATATGAAGG+TGG | - | chr6_2:15961079-15961098 | Msa0910880:CDS | 40.0% | |
!!! | GTGCTCTCTGGGATATTTTT+CGG | - | chr6_2:15961135-15961154 | Msa0910880:CDS | 40.0% |
CTATTGCTCTCCTATAAAGC+AGG | - | chr6_2:15961220-15961239 | Msa0910880:CDS | 40.0% | |
TCATAAGAAGAGGCTTAAGG+AGG | - | chr6_2:15961436-15961455 | Msa0910880:CDS | 40.0% | |
!! | TTCGTACGTTGTTTGGTTTG+TGG | - | chr6_2:15961485-15961504 | Msa0910880:CDS | 40.0% |
AGCTTCTGAACAAAACTCCA+AGG | + | chr6_2:15961573-15961592 | None:intergenic | 40.0% | |
!!! | TGGAGTTTTGTTCAGAAGCT+AGG | - | chr6_2:15961573-15961592 | Msa0910880:CDS | 40.0% |
GACATTTAGATCGTGACTCA+AGG | - | chr6_2:15961991-15962010 | Msa0910880:intron | 40.0% | |
!! | ATTGGTAGCGTGATGGTTAT+AGG | - | chr6_2:15962023-15962042 | Msa0910880:intron | 40.0% |
GACAAAATCAAGTGCAACCT+TGG | + | chr6_2:15962246-15962265 | None:intergenic | 40.0% | |
TCTGTGGAACAGTGATTTAC+TGG | + | chr6_2:15962323-15962342 | None:intergenic | 40.0% | |
AGTAAATCACTGTTCCACAG+AGG | - | chr6_2:15962322-15962341 | Msa0910880:CDS | 40.0% | |
AGCATGACTTTGCCAACAAT+AGG | + | chr6_2:15962526-15962545 | None:intergenic | 40.0% | |
!! | AGATTCTGCAAGGTGCTATT+TGG | - | chr6_2:15962635-15962654 | Msa0910880:intron | 40.0% |
!!! | TTTTCTGGTTGCTGCTTCTT+TGG | - | chr6_2:15962885-15962904 | Msa0910880:CDS | 40.0% |
!! | CTGCTTCTTTGGTAACGAAA+AGG | - | chr6_2:15962896-15962915 | Msa0910880:CDS | 40.0% |
CATACATGCTATGCTTGATG+CGG | - | chr6_2:15962932-15962951 | Msa0910880:CDS | 40.0% | |
ATCTCTACCATCCAGCTTCA+AGG | + | chr6_2:15957685-15957704 | None:intergenic | 45.0% | |
GAGTAATGCAGAGAAGAAGG+AGG | - | chr6_2:15957764-15957783 | Msa0910880:intron | 45.0% | |
CATGCATGTCCTTTGTGTTG+TGG | - | chr6_2:15958145-15958164 | Msa0910880:CDS | 45.0% | |
AGATCAGTGTGCATACTGGT+AGG | - | chr6_2:15958856-15958875 | Msa0910880:intron | 45.0% | |
GATCAGTGTGCATACTGGTA+GGG | - | chr6_2:15958857-15958876 | Msa0910880:intron | 45.0% | |
TGCAGATCCAGTTGAGTTTG+AGG | - | chr6_2:15959075-15959094 | Msa0910880:CDS | 45.0% | |
CATGCAGATAATCTTGCCCT+TGG | + | chr6_2:15959108-15959127 | None:intergenic | 45.0% | |
CAAGGGCAAGATTATCTGCA+TGG | - | chr6_2:15959106-15959125 | Msa0910880:CDS | 45.0% | |
TTCATGAATCTCAGGCTGAG+CGG | + | chr6_2:15959179-15959198 | None:intergenic | 45.0% | |
CTCAGCCTGAGATTCATGAA+TGG | - | chr6_2:15959179-15959198 | Msa0910880:intron | 45.0% | |
GCCAAATTGCATCTCTGAGT+TGG | - | chr6_2:15959303-15959322 | Msa0910880:intron | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | - | chr6_2:15959429-15959448 | Msa0910880:intron | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | - | chr6_2:15959429-15959448 | Msa0910880:intron | 45.0% | |
! | TCAATGGCACTGGAGAAAAG+GGG | - | chr6_2:15959594-15959613 | Msa0910880:CDS | 45.0% |
CAAGCACATCTGGTATAAGC+TGG | - | chr6_2:15959647-15959666 | Msa0910880:CDS | 45.0% | |
AATGCATGCCACATGACAAG+CGG | + | chr6_2:15959676-15959695 | None:intergenic | 45.0% | |
TTTGCGACCATTTGTGTACC+CGG | + | chr6_2:15959934-15959953 | None:intergenic | 45.0% | |
ATGATATGAGCTCGGCACAA+TGG | + | chr6_2:15960031-15960050 | None:intergenic | 45.0% | |
TATCAGGCAGCTTCAAAGCA+AGG | + | chr6_2:15960100-15960119 | None:intergenic | 45.0% | |
! | GCTGCCTGATAATGTTCAGA+TGG | - | chr6_2:15960109-15960128 | Msa0910880:intron | 45.0% |
ATCACAATGGAGCTCTGTCA+CGG | + | chr6_2:15960189-15960208 | None:intergenic | 45.0% | |
TGGACTTGAAGCATGAACGA+TGG | - | chr6_2:15960692-15960711 | Msa0910880:CDS | 45.0% | |
TGAAGCATGAACGATGGCTT+CGG | - | chr6_2:15960698-15960717 | Msa0910880:CDS | 45.0% | |
AGCACCTTGAGCAAGAAAAG+AGG | - | chr6_2:15960916-15960935 | Msa0910880:intron | 45.0% | |
GCACCTTGAGCAAGAAAAGA+GGG | - | chr6_2:15960917-15960936 | Msa0910880:intron | 45.0% | |
CAAGAAAAGAGGGAGCTTCT+TGG | - | chr6_2:15960927-15960946 | Msa0910880:CDS | 45.0% | |
! | GGAGCTTCTTGGTGATAATC+AGG | - | chr6_2:15960938-15960957 | Msa0910880:CDS | 45.0% |
ATGGAGAGACCAATGTTGAC+AGG | - | chr6_2:15960961-15960980 | Msa0910880:CDS | 45.0% | |
! | TGCTCATCTGAAGCAGTTAC+GGG | + | chr6_2:15961005-15961024 | None:intergenic | 45.0% |
!! | CTGGGATATTTTTCGGAGAG+AGG | - | chr6_2:15961142-15961161 | Msa0910880:CDS | 45.0% |
AAGAGGCTTAAGGAGGAGTA+TGG | - | chr6_2:15961443-15961462 | Msa0910880:CDS | 45.0% | |
GACTTGTAGGAATTGAGCCT+TGG | - | chr6_2:15961553-15961572 | Msa0910880:CDS | 45.0% | |
!!! | GATGCTGTTTTCATTCCAGC+TGG | - | chr6_2:15961597-15961616 | Msa0910880:CDS | 45.0% |
TTTGTTGCAGTCATGCACCA+AGG | - | chr6_2:15962226-15962245 | Msa0910880:intron | 45.0% | |
! | AAGCACTCGCCAACATTTTC+AGG | + | chr6_2:15962272-15962291 | None:intergenic | 45.0% |
CTGTTCCACAGAGGACAAAT+TGG | - | chr6_2:15962331-15962350 | Msa0910880:CDS | 45.0% | |
TTCCACAGAGGACAAATTGG+AGG | - | chr6_2:15962334-15962353 | Msa0910880:CDS | 45.0% | |
TACCTCCAATTTGTCCTCTG+TGG | + | chr6_2:15962339-15962358 | None:intergenic | 45.0% | |
CAGTTTCAAAATCTGGGCCT+GGG | - | chr6_2:15962482-15962501 | Msa0910880:intron | 45.0% | |
AGTTTCAAAATCTGGGCCTG+GGG | - | chr6_2:15962483-15962502 | Msa0910880:intron | 45.0% | |
AGCACCTTGCAGAATCTAGA+TGG | + | chr6_2:15962632-15962651 | None:intergenic | 45.0% | |
GCTTGATGCGGTAGAAAAGT+TGG | - | chr6_2:15962944-15962963 | Msa0910880:CDS | 45.0% | |
GGTCAGTGATTGCAAACTTG+AGG | - | chr6_2:15962976-15962995 | Msa0910880:CDS | 45.0% | |
GATTGCAAACTTGAGGCGAA+AGG | - | chr6_2:15962983-15963002 | Msa0910880:CDS | 45.0% | |
ATGGCTTCCTTGAAGCTGGA+TGG | - | chr6_2:15957675-15957694 | Msa0910880:CDS | 50.0% | |
GCAAGAAGAGAGAGTCCTTG+AGG | + | chr6_2:15958414-15958433 | None:intergenic | 50.0% | |
! | GACAAAGTAGGCGCGTGTTT+TGG | - | chr6_2:15958508-15958527 | Msa0910880:intron | 50.0% |
GGCAGTGTACGTGTCGTATT+CGG | - | chr6_2:15958634-15958653 | Msa0910880:intron | 50.0% | |
GGGCAAGATTATCTGCATGG+TGG | - | chr6_2:15959109-15959128 | Msa0910880:intron | 50.0% | |
TCAAAATCTGGGTGGCATGC+CGG | - | chr6_2:15959202-15959221 | Msa0910880:intron | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | + | chr6_2:15959436-15959455 | None:intergenic | 50.0% | |
GGCTTAAAAACCACCTTCCC+TGG | + | chr6_2:15959445-15959464 | None:intergenic | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | + | chr6_2:15959436-15959455 | None:intergenic | 50.0% | |
TCACGAAAAACCACCTTCCC+TGG | + | chr6_2:15959499-15959518 | None:intergenic | 50.0% | |
GTCGCAAAGATAGGCTCGAT+TGG | - | chr6_2:15959946-15959965 | Msa0910880:intron | 50.0% | |
!! | GATTTTCTGAGGAGCTTGGG+CGG | - | chr6_2:15960156-15960175 | Msa0910880:intron | 50.0% |
!! | ATTTTCTGAGGAGCTTGGGC+GGG | - | chr6_2:15960157-15960176 | Msa0910880:intron | 50.0% |
! | CACGGATTCGAGTTCCACTT+TGG | + | chr6_2:15960865-15960884 | None:intergenic | 50.0% |
! | GCTCCCTCTTTTCTTGCTCA+AGG | + | chr6_2:15960923-15960942 | None:intergenic | 50.0% |
GAAGCAGTTACGGGAGAAGA+CGG | + | chr6_2:15960996-15961015 | None:intergenic | 50.0% | |
ACTTGATGAGGACAACCAGC+TGG | + | chr6_2:15961615-15961634 | None:intergenic | 50.0% | |
CATTCCTAAAGGAGGCGGTT+CGG | - | chr6_2:15961902-15961921 | Msa0910880:intron | 50.0% | |
! | TTTTCCGAACCGCCTCCTTT+AGG | + | chr6_2:15961909-15961928 | None:intergenic | 50.0% |
! | AAAGGAGGCGGTTCGGAAAA+TGG | - | chr6_2:15961909-15961928 | Msa0910880:intron | 50.0% |
CGAGTGCTTGCGTTATACAG+AGG | - | chr6_2:15962283-15962302 | Msa0910880:intron | 50.0% | |
GCAGTTTCAAAATCTGGGCC+TGG | - | chr6_2:15962481-15962500 | Msa0910880:intron | 50.0% | |
GTTTCAAAATCTGGGCCTGG+GGG | - | chr6_2:15962484-15962503 | Msa0910880:intron | 50.0% | |
GAAGTATACTGAAAGCCCCC+AGG | + | chr6_2:15962502-15962521 | None:intergenic | 50.0% | |
GGTCAGACACTCCTCGGATT+AGG | - | chr6_2:15958470-15958489 | Msa0910880:intron | 55.0% | |
! | TCCTCGGATTAGGCGTGTCT+CGG | - | chr6_2:15958480-15958499 | Msa0910880:intron | 55.0% |
! | GATTAGGCGTGTCTCGGTGT+CGG | - | chr6_2:15958486-15958505 | Msa0910880:intron | 55.0% |
!! | GTCTCGGTGTCGGACAAAGT+AGG | - | chr6_2:15958496-15958515 | Msa0910880:intron | 55.0% |
!!! | GTAGGCGCGTGTTTTGGTGT+CGG | - | chr6_2:15958514-15958533 | Msa0910880:intron | 55.0% |
!! | TGTCGGTGTCGTGTCAGTGT+CGG | + | chr6_2:15958553-15958572 | None:intergenic | 55.0% |
ACCGAATGATCCAGGGAAGG+TGG | - | chr6_2:15959432-15959451 | Msa0910880:intron | 55.0% | |
ACCGAATGATCCAGGGAAGG+TGG | - | chr6_2:15959432-15959451 | Msa0910880:intron | 55.0% | |
ATGAGCTCGGCACAATGGTG+TGG | + | chr6_2:15960026-15960045 | None:intergenic | 55.0% | |
CGGCAGGGATGATATGAGCT+CGG | + | chr6_2:15960039-15960058 | None:intergenic | 55.0% | |
!! | TTTTCTGAGGAGCTTGGGCG+GGG | - | chr6_2:15960158-15960177 | Msa0910880:intron | 55.0% |
AGATCGTGACTCAAGGAGCG+TGG | - | chr6_2:15961998-15962017 | Msa0910880:intron | 55.0% | |
! | GACTCAAGGAGCGTGGTGAT+TGG | - | chr6_2:15962005-15962024 | Msa0910880:intron | 55.0% |
!! | CGTGGTGATTGGTAGCGTGA+TGG | - | chr6_2:15962016-15962035 | Msa0910880:intron | 55.0% |
ACCGAGACACGCCTAATCCG+AGG | + | chr6_2:15958484-15958503 | None:intergenic | 60.0% | |
! | TGTCGTGTCAGTGTCGGGCA+CGG | + | chr6_2:15958547-15958566 | None:intergenic | 60.0% |
!! | GTCGGTGTCGTGTCAGTGTC+GGG | + | chr6_2:15958552-15958571 | None:intergenic | 60.0% |
AAGCTCCCCACGACGAAGCT+CGG | + | chr6_2:15959047-15959066 | None:intergenic | 60.0% | |
CTTCGTCGTGGGGAGCTTCT+AGG | - | chr6_2:15959049-15959068 | Msa0910880:CDS | 60.0% | |
GCGGATGCTACCATCACTGC+CGG | + | chr6_2:15959224-15959243 | None:intergenic | 60.0% | |
GCTGGGAACCGCTTGTCATG+TGG | - | chr6_2:15959665-15959684 | Msa0910880:CDS | 60.0% | |
CGGAGCAGCAGCGGAGACAA+AGG | + | chr6_2:15959027-15959046 | None:intergenic | 65.0% | |
GACGAAGCTCGGAGCAGCAG+CGG | + | chr6_2:15959036-15959055 | None:intergenic | 65.0% | |
TGCTGCTCCGAGCTTCGTCG+TGG | - | chr6_2:15959037-15959056 | Msa0910880:intron | 65.0% | |
GCTGCTCCGAGCTTCGTCGT+GGG | - | chr6_2:15959038-15959057 | Msa0910880:intron | 65.0% | |
CTGCTCCGAGCTTCGTCGTG+GGG | - | chr6_2:15959039-15959058 | Msa0910880:intron | 65.0% | |
CGTCGTGGGGAGCTTCTAGG+TGG | - | chr6_2:15959052-15959071 | Msa0910880:CDS | 65.0% | |
GGGTGGCATGCCGGCAGTGA+TGG | - | chr6_2:15959211-15959230 | Msa0910880:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 15957675 | 15963012 | 15957675 | ID=Msa0910880;Name=Msa0910880 |
chr6_2 | mRNA | 15957675 | 15963012 | 15957675 | ID=Msa0910880-mRNA-1;Parent=Msa0910880;Name=Msa0910880-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|0.27|1|1|11|0|842 |
chr6_2 | exon | 15962638 | 15963012 | 15962638 | ID=Msa0910880-mRNA-1:exon:3532;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15962286 | 15962424 | 15962286 | ID=Msa0910880-mRNA-1:exon:3531;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15961814 | 15961880 | 15961814 | ID=Msa0910880-mRNA-1:exon:3530;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15960919 | 15961723 | 15960919 | ID=Msa0910880-mRNA-1:exon:3529;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15960467 | 15960784 | 15960467 | ID=Msa0910880-mRNA-1:exon:3528;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15959446 | 15959847 | 15959446 | ID=Msa0910880-mRNA-1:exon:3527;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15959223 | 15959295 | 15959223 | ID=Msa0910880-mRNA-1:exon:3526;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15959040 | 15959125 | 15959040 | ID=Msa0910880-mRNA-1:exon:3525;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15958332 | 15958451 | 15958332 | ID=Msa0910880-mRNA-1:exon:3524;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15958127 | 15958215 | 15958127 | ID=Msa0910880-mRNA-1:exon:3523;Parent=Msa0910880-mRNA-1 |
chr6_2 | exon | 15957675 | 15957729 | 15957675 | ID=Msa0910880-mRNA-1:exon:3522;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15962638 | 15963012 | 15962638 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15962286 | 15962424 | 15962286 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15961814 | 15961880 | 15961814 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15960919 | 15961723 | 15960919 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15960467 | 15960784 | 15960467 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15959446 | 15959847 | 15959446 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15959223 | 15959295 | 15959223 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15959040 | 15959125 | 15959040 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15958332 | 15958451 | 15958332 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15958127 | 15958215 | 15958127 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
chr6_2 | CDS | 15957675 | 15957729 | 15957675 | ID=Msa0910880-mRNA-1:cds;Parent=Msa0910880-mRNA-1 |
Gene Sequence |
Protein sequence |