Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913400 | KAF7843566.1 | 71.032 | 252 | 57 | 2 | 70 | 306 | 5 | 255 | 3.08e-108 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913400 | sp|Q5XEM9|ALFL5_ARATH | 55.859 | 256 | 91 | 3 | 71 | 306 | 7 | 260 | 1.08e-90 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0913400 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913400 | MtrunA17_Chr8g0343441 | 69.841 | 252 | 59 | 2 | 71 | 306 | 6 | 256 | 2.07e-107 | 313 |
| Msa0913400 | MtrunA17_Chr2g0300241 | 61.508 | 252 | 86 | 4 | 65 | 306 | 3 | 253 | 4.44e-97 | 286 |
| Msa0913400 | MtrunA17_Chr1g0150821 | 60.000 | 260 | 81 | 3 | 69 | 306 | 5 | 263 | 1.48e-93 | 278 |
| Msa0913400 | MtrunA17_Chr2g0329821 | 58.367 | 245 | 86 | 2 | 76 | 305 | 7 | 250 | 3.83e-87 | 261 |
| Msa0913400 | MtrunA17_Chr4g0076771 | 58.333 | 240 | 82 | 3 | 76 | 299 | 12 | 249 | 2.60e-84 | 254 |
| Msa0913400 | MtrunA17_Chr4g0006381 | 50.207 | 241 | 103 | 6 | 76 | 306 | 9 | 242 | 1.99e-70 | 218 |
| Msa0913400 | MtrunA17_Chr7g0242511 | 49.583 | 240 | 106 | 6 | 76 | 306 | 9 | 242 | 6.63e-69 | 214 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0913400 | AT5G20510.1 | 55.859 | 256 | 91 | 3 | 71 | 306 | 7 | 260 | 1.10e-91 | 273 |
| Msa0913400 | AT3G42790.1 | 58.776 | 245 | 87 | 3 | 72 | 305 | 8 | 249 | 1.31e-89 | 268 |
| Msa0913400 | AT1G14510.1 | 56.855 | 248 | 93 | 3 | 69 | 303 | 3 | 249 | 7.17e-83 | 251 |
| Msa0913400 | AT5G26210.1 | 60.714 | 252 | 83 | 2 | 69 | 305 | 4 | 254 | 7.14e-81 | 246 |
| Msa0913400 | AT2G02470.2 | 56.400 | 250 | 92 | 5 | 69 | 306 | 3 | 247 | 1.60e-79 | 242 |
| Msa0913400 | AT2G02470.1 | 54.297 | 256 | 97 | 5 | 69 | 306 | 3 | 256 | 2.67e-79 | 241 |
| Msa0913400 | AT5G05610.2 | 53.191 | 235 | 94 | 5 | 73 | 298 | 7 | 234 | 2.13e-73 | 226 |
| Msa0913400 | AT5G05610.1 | 53.191 | 235 | 94 | 5 | 73 | 298 | 7 | 234 | 2.13e-73 | 226 |
| Msa0913400 | AT5G20510.2 | 52.294 | 218 | 82 | 3 | 109 | 306 | 4 | 219 | 2.37e-68 | 212 |
| Msa0913400 | AT3G11200.1 | 51.626 | 246 | 100 | 5 | 65 | 298 | 1 | 239 | 9.79e-68 | 212 |
| Msa0913400 | AT5G20510.3 | 64.375 | 160 | 57 | 0 | 71 | 230 | 7 | 166 | 2.19e-66 | 206 |
| Msa0913400 | AT2G02470.3 | 65.333 | 150 | 49 | 1 | 76 | 225 | 11 | 157 | 8.46e-56 | 181 |
| Msa0913400 | AT3G11200.2 | 51.980 | 202 | 78 | 5 | 109 | 298 | 32 | 226 | 1.71e-53 | 175 |
Find 72 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAAATCCAGAATTTATC+AGG | 0.212139 | 6_2:+24195840 | None:intergenic |
| GCAGCGGGCTATAAAATTTC+AGG | 0.235613 | 6_2:-24196432 | Msa0913400:intron |
| GGAAGTCAATTTACCTTCTA+AGG | 0.242496 | 6_2:-24196753 | Msa0913400:CDS |
| TTGCCATGGCACACTACTTT+GGG | 0.283032 | 6_2:-24196619 | Msa0913400:CDS |
| ACTTGGATTTGCTGCCATTA+TGG | 0.283479 | 6_2:+24196468 | None:intergenic |
| CTTCACAACGAATCAATGTT+AGG | 0.284992 | 6_2:-24197205 | Msa0913400:CDS |
| TCAATATTTGAAGTTGTTAC+TGG | 0.298160 | 6_2:-24196533 | Msa0913400:CDS |
| AGCCACAGACTCTCCTTCTC+TGG | 0.311063 | 6_2:+24196800 | None:intergenic |
| ATCATAGGCTCGGGAAGATC+TGG | 0.326581 | 6_2:+24196722 | None:intergenic |
| TCAAAGTTAAATCCCATCAT+AGG | 0.368738 | 6_2:+24196707 | None:intergenic |
| CTGCACTTTCGAGTTGCACT+TGG | 0.379695 | 6_2:+24196451 | None:intergenic |
| TCTATAACTTCAAGCCATAA+TGG | 0.402695 | 6_2:-24196482 | Msa0913400:CDS |
| ATTGCCATGGCACACTACTT+TGG | 0.419300 | 6_2:-24196620 | Msa0913400:CDS |
| TGATGGGATTTAACTTTGAA+AGG | 0.433558 | 6_2:-24196703 | Msa0913400:CDS |
| ATTCGTTGTGAAGGAAAAGA+AGG | 0.458259 | 6_2:+24197215 | None:intergenic |
| TTCACAACGAATCAATGTTA+GGG | 0.463105 | 6_2:-24197204 | Msa0913400:CDS |
| TTGACTTCCCACTGCTCACT+AGG | 0.465024 | 6_2:+24196767 | None:intergenic |
| AAAGTGCCGACAAGAAATAA+AGG | 0.470381 | 6_2:-24197020 | Msa0913400:intron |
| CTCTTGTAGTTATTGCATGA+TGG | 0.472084 | 6_2:+24195735 | None:intergenic |
| ATCGCATGCAAGAGAAAGAT+TGG | 0.476387 | 6_2:-24196679 | Msa0913400:CDS |
| GATGGGATTTAACTTTGAAA+GGG | 0.476772 | 6_2:-24196702 | Msa0913400:CDS |
| TCATTATGCTTAACCCTACC+AGG | 0.485985 | 6_2:+24195771 | None:intergenic |
| TCATAGGCTCGGGAAGATCT+GGG | 0.486072 | 6_2:+24196723 | None:intergenic |
| ATCACTATGAACAGCAACTA+AGG | 0.486624 | 6_2:+24196652 | None:intergenic |
| GATTTCAATGGTCGTCGCGC+TGG | 0.486877 | 6_2:-24196875 | Msa0913400:CDS |
| AGATCTTCCCGAGCCTATGA+TGG | 0.488087 | 6_2:-24196720 | Msa0913400:CDS |
| AATATGACCCTGATAAATTC+TGG | 0.489252 | 6_2:-24195848 | Msa0913400:CDS |
| TCCTGGCAAAACTTGTCAGC+AGG | 0.489793 | 6_2:-24197138 | Msa0913400:intron |
| TATCATTTATCATATTGAAA+AGG | 0.496927 | 6_2:+24196561 | None:intergenic |
| AAGGAAAGTCTTGTTTCTTG+AGG | 0.511017 | 6_2:-24196967 | Msa0913400:CDS |
| CACTACTTTGGGGCAAGATG+TGG | 0.517023 | 6_2:-24196608 | Msa0913400:CDS |
| GTTAAATCCCATCATAGGCT+CGG | 0.526047 | 6_2:+24196712 | None:intergenic |
| TCTCCTTCTCTGGGTCACAT+TGG | 0.535400 | 6_2:+24196810 | None:intergenic |
| ACTGTATGCCGTTGTTTGAG+AGG | 0.538437 | 6_2:+24196930 | None:intergenic |
| TTAAATCCCATCATAGGCTC+GGG | 0.538542 | 6_2:+24196713 | None:intergenic |
| GTGCAACTCGAAAGTGCAGC+GGG | 0.541434 | 6_2:-24196447 | Msa0913400:CDS |
| TTTGTGAGAGGTGGTTCCAT+GGG | 0.547613 | 6_2:-24195812 | Msa0913400:CDS |
| AGCAGAAAAGAAACAAGTAA+AGG | 0.552762 | 6_2:-24196510 | Msa0913400:CDS |
| AAATCCCGTGGAATTCGAGT+TGG | 0.554000 | 6_2:-24197176 | Msa0913400:CDS |
| GCCACAGACTCTCCTTCTCT+GGG | 0.561677 | 6_2:+24196801 | None:intergenic |
| TGACTTCCCACTGCTCACTA+GGG | 0.565869 | 6_2:+24196768 | None:intergenic |
| ATCTCTGAAAACTTCTTCGA+CGG | 0.569114 | 6_2:+24196895 | None:intergenic |
| CAGTTTCCCTAGTGAGCAGT+GGG | 0.569838 | 6_2:-24196774 | Msa0913400:CDS |
| GTGTGAATATCACCCCTGGT+AGG | 0.570139 | 6_2:-24195785 | Msa0913400:CDS |
| TCTGTGATATTTGTGAGAGG+TGG | 0.570412 | 6_2:-24195821 | Msa0913400:CDS |
| TGTGAATATCACCCCTGGTA+GGG | 0.574077 | 6_2:-24195784 | Msa0913400:CDS |
| GTAACAACTTCAAATATTGA+CGG | 0.577921 | 6_2:+24196536 | None:intergenic |
| TGATATTCACACATTTCCCA+TGG | 0.578749 | 6_2:+24195796 | None:intergenic |
| CATAGGCTCGGGAAGATCTG+GGG | 0.581002 | 6_2:+24196724 | None:intergenic |
| GATCTTCCCGAGCCTATGAT+GGG | 0.589201 | 6_2:-24196719 | Msa0913400:CDS |
| ATTTGTGAGAGGTGGTTCCA+TGG | 0.592358 | 6_2:-24195813 | Msa0913400:CDS |
| CGAAAATGCCTCTCAAACAA+CGG | 0.596105 | 6_2:-24196938 | Msa0913400:CDS |
| TGCCATGGCACACTACTTTG+GGG | 0.603166 | 6_2:-24196618 | Msa0913400:CDS |
| CTAACATTGATTCGTTGTGA+AGG | 0.606118 | 6_2:+24197206 | None:intergenic |
| TTGCTGTTCATAGTGATGCA+TGG | 0.606640 | 6_2:-24196646 | Msa0913400:CDS |
| ATAGGCTCGGGAAGATCTGG+GGG | 0.607426 | 6_2:+24196725 | None:intergenic |
| GTGGATTTGACAAATCTGAC+AGG | 0.615955 | 6_2:-24196589 | Msa0913400:CDS |
| CATTATGCTTAACCCTACCA+GGG | 0.617169 | 6_2:+24195772 | None:intergenic |
| TGCCCCAAAGTAGTGTGCCA+TGG | 0.618279 | 6_2:+24196616 | None:intergenic |
| TAACCAATGTGACCCAGAGA+AGG | 0.621487 | 6_2:-24196813 | Msa0913400:CDS |
| AGAAAATCCAGAATTTATCA+GGG | 0.630317 | 6_2:+24195841 | None:intergenic |
| TGATGCATGGTTAATTGCCA+TGG | 0.631616 | 6_2:-24196633 | Msa0913400:CDS |
| ATAGAACTCTTCAACATCAG+TGG | 0.635056 | 6_2:+24196835 | None:intergenic |
| ACCCAGAGAAGGAGAGTCTG+TGG | 0.635764 | 6_2:-24196802 | Msa0913400:CDS |
| ACAGTTTCCCTAGTGAGCAG+TGG | 0.642804 | 6_2:-24196775 | Msa0913400:CDS |
| TCACAACGAATCAATGTTAG+GGG | 0.644741 | 6_2:-24197203 | Msa0913400:CDS |
| AGTGCAACTCGAAAGTGCAG+CGG | 0.657737 | 6_2:-24196448 | Msa0913400:CDS |
| GTTAGGGGAAAGAAATCCCG+TGG | 0.660372 | 6_2:-24197188 | Msa0913400:CDS |
| AAATGTGTGAATATCACCCC+TGG | 0.663451 | 6_2:-24195789 | Msa0913400:CDS |
| GAAGACGGAGAGAACTCATG+TGG | 0.691398 | 6_2:-24195885 | Msa0913400:CDS |
| GAGAACTCATGTGGTGCATG+CGG | 0.697071 | 6_2:-24195876 | Msa0913400:CDS |
| ATTATGCTTAACCCTACCAG+GGG | 0.708497 | 6_2:+24195773 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATTTATCATATTGAAA+AGG | + | chr6_2:24196385-24196404 | None:intergenic | 15.0% |
| !! | AAATGACATAAAACATTAAA+TGG | + | chr6_2:24196627-24196646 | None:intergenic | 15.0% |
| !! | TATCATTTATCATATTGAAA+AGG | + | chr6_2:24196385-24196404 | None:intergenic | 15.0% |
| !! | AAATGACATAAAACATTAAA+TGG | + | chr6_2:24196627-24196646 | None:intergenic | 15.0% |
| !! | AATAATATTCCTTATGCTAT+TGG | + | chr6_2:24196754-24196773 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATATTATT+AGG | - | chr6_2:24196754-24196773 | Msa0913400:CDS | 20.0% |
| !! | TTTACTACTTCGATAATATT+TGG | - | chr6_2:24196910-24196929 | Msa0913400:CDS | 20.0% |
| !! | AATAATATTCCTTATGCTAT+TGG | + | chr6_2:24196754-24196773 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATATTATT+AGG | - | chr6_2:24196754-24196773 | Msa0913400:CDS | 20.0% |
| !! | TTTACTACTTCGATAATATT+TGG | - | chr6_2:24196910-24196929 | Msa0913400:CDS | 20.0% |
| ! | TAAAATACTTGCAATAGAGT+AGG | + | chr6_2:24195845-24195864 | None:intergenic | 25.0% |
| !! | CAAAAACCTTTATTTCTTGT+CGG | + | chr6_2:24195932-24195951 | None:intergenic | 25.0% |
| ! | ACAAGCAAAAATCTAAGAAA+AGG | - | chr6_2:24195957-24195976 | Msa0913400:intron | 25.0% |
| ! | GTAACAACTTCAAATATTGA+CGG | + | chr6_2:24196410-24196429 | None:intergenic | 25.0% |
| !! | TCAATATTTGAAGTTGTTAC+TGG | - | chr6_2:24196410-24196429 | Msa0913400:intron | 25.0% |
| ! | CTTCTTTGATAAAAATCTCA+AGG | + | chr6_2:24196803-24196822 | None:intergenic | 25.0% |
| ! | GATAAAAATCCAATAGCATA+AGG | + | chr6_2:24196869-24196888 | None:intergenic | 25.0% |
| ! | AATTTATGTTATAGGACAGA+AGG | + | chr6_2:24196993-24197012 | None:intergenic | 25.0% |
| ! | AGAAAATCCAGAATTTATCA+GGG | + | chr6_2:24197105-24197124 | None:intergenic | 25.0% |
| ! | TAAAATACTTGCAATAGAGT+AGG | + | chr6_2:24195845-24195864 | None:intergenic | 25.0% |
| !! | CAAAAACCTTTATTTCTTGT+CGG | + | chr6_2:24195932-24195951 | None:intergenic | 25.0% |
| ! | ACAAGCAAAAATCTAAGAAA+AGG | - | chr6_2:24195957-24195976 | Msa0913400:intron | 25.0% |
| ! | GTAACAACTTCAAATATTGA+CGG | + | chr6_2:24196410-24196429 | None:intergenic | 25.0% |
| !! | TCAATATTTGAAGTTGTTAC+TGG | - | chr6_2:24196410-24196429 | Msa0913400:intron | 25.0% |
| ! | CTTCTTTGATAAAAATCTCA+AGG | + | chr6_2:24196803-24196822 | None:intergenic | 25.0% |
| ! | GATAAAAATCCAATAGCATA+AGG | + | chr6_2:24196869-24196888 | None:intergenic | 25.0% |
| ! | AATTTATGTTATAGGACAGA+AGG | + | chr6_2:24196993-24197012 | None:intergenic | 25.0% |
| ! | AGAAAATCCAGAATTTATCA+GGG | + | chr6_2:24197105-24197124 | None:intergenic | 25.0% |
| TTCACAACGAATCAATGTTA+GGG | - | chr6_2:24195739-24195758 | Msa0913400:CDS | 30.0% | |
| ! | GAAGTTTTCAGAGATTTCAA+TGG | - | chr6_2:24196056-24196075 | Msa0913400:intron | 30.0% |
| TCAAAGTTAAATCCCATCAT+AGG | + | chr6_2:24196239-24196258 | None:intergenic | 30.0% | |
| ! | TGATGGGATTTAACTTTGAA+AGG | - | chr6_2:24196240-24196259 | Msa0913400:intron | 30.0% |
| ! | GATGGGATTTAACTTTGAAA+GGG | - | chr6_2:24196241-24196260 | Msa0913400:intron | 30.0% |
| AGCAGAAAAGAAACAAGTAA+AGG | - | chr6_2:24196433-24196452 | Msa0913400:CDS | 30.0% | |
| TCTATAACTTCAAGCCATAA+TGG | - | chr6_2:24196461-24196480 | Msa0913400:CDS | 30.0% | |
| ATAAAGTCCTTGAACTTCTT+AGG | + | chr6_2:24196602-24196621 | None:intergenic | 30.0% | |
| TGATGACTAATATGTCTGTT+AGG | - | chr6_2:24196703-24196722 | Msa0913400:CDS | 30.0% | |
| AGAAATTGAGAGAGAGAAAA+GGG | + | chr6_2:24196831-24196850 | None:intergenic | 30.0% | |
| AAGAAATTGAGAGAGAGAAA+AGG | + | chr6_2:24196832-24196851 | None:intergenic | 30.0% | |
| TTTCTCTCTCTCAATTTCTT+AGG | - | chr6_2:24196832-24196851 | Msa0913400:CDS | 30.0% | |
| AGAAATTGAGAGAGAGAAAA+GGG | + | chr6_2:24196831-24196850 | None:intergenic | 30.0% | |
| AAGAAATTGAGAGAGAGAAA+AGG | + | chr6_2:24196832-24196851 | None:intergenic | 30.0% | |
| TTTCTCTCTCTCAATTTCTT+AGG | - | chr6_2:24196832-24196851 | Msa0913400:CDS | 30.0% | |
| GTGTGGTGAATTTATGTTAT+AGG | + | chr6_2:24197001-24197020 | None:intergenic | 30.0% | |
| AATATGACCCTGATAAATTC+TGG | - | chr6_2:24197095-24197114 | Msa0913400:intron | 30.0% | |
| CAGAAAATCCAGAATTTATC+AGG | + | chr6_2:24197106-24197125 | None:intergenic | 30.0% | |
| ! | TTTTCTGTGATATTTGTGAG+AGG | - | chr6_2:24197119-24197138 | Msa0913400:intron | 30.0% |
| TTCACAACGAATCAATGTTA+GGG | - | chr6_2:24195739-24195758 | Msa0913400:CDS | 30.0% | |
| ! | GAAGTTTTCAGAGATTTCAA+TGG | - | chr6_2:24196056-24196075 | Msa0913400:intron | 30.0% |
| TCAAAGTTAAATCCCATCAT+AGG | + | chr6_2:24196239-24196258 | None:intergenic | 30.0% | |
| ! | TGATGGGATTTAACTTTGAA+AGG | - | chr6_2:24196240-24196259 | Msa0913400:intron | 30.0% |
| ! | GATGGGATTTAACTTTGAAA+GGG | - | chr6_2:24196241-24196260 | Msa0913400:intron | 30.0% |
| AGCAGAAAAGAAACAAGTAA+AGG | - | chr6_2:24196433-24196452 | Msa0913400:CDS | 30.0% | |
| TCTATAACTTCAAGCCATAA+TGG | - | chr6_2:24196461-24196480 | Msa0913400:CDS | 30.0% | |
| ATAAAGTCCTTGAACTTCTT+AGG | + | chr6_2:24196602-24196621 | None:intergenic | 30.0% | |
| TGATGACTAATATGTCTGTT+AGG | - | chr6_2:24196703-24196722 | Msa0913400:CDS | 30.0% | |
| AGAAATTGAGAGAGAGAAAA+GGG | + | chr6_2:24196831-24196850 | None:intergenic | 30.0% | |
| AAGAAATTGAGAGAGAGAAA+AGG | + | chr6_2:24196832-24196851 | None:intergenic | 30.0% | |
| TTTCTCTCTCTCAATTTCTT+AGG | - | chr6_2:24196832-24196851 | Msa0913400:CDS | 30.0% | |
| AGAAATTGAGAGAGAGAAAA+GGG | + | chr6_2:24196831-24196850 | None:intergenic | 30.0% | |
| AAGAAATTGAGAGAGAGAAA+AGG | + | chr6_2:24196832-24196851 | None:intergenic | 30.0% | |
| TTTCTCTCTCTCAATTTCTT+AGG | - | chr6_2:24196832-24196851 | Msa0913400:CDS | 30.0% | |
| GTGTGGTGAATTTATGTTAT+AGG | + | chr6_2:24197001-24197020 | None:intergenic | 30.0% | |
| AATATGACCCTGATAAATTC+TGG | - | chr6_2:24197095-24197114 | Msa0913400:intron | 30.0% | |
| CAGAAAATCCAGAATTTATC+AGG | + | chr6_2:24197106-24197125 | None:intergenic | 30.0% | |
| ! | TTTTCTGTGATATTTGTGAG+AGG | - | chr6_2:24197119-24197138 | Msa0913400:intron | 30.0% |
| ATTCGTTGTGAAGGAAAAGA+AGG | + | chr6_2:24195731-24195750 | None:intergenic | 35.0% | |
| !! | CTAACATTGATTCGTTGTGA+AGG | + | chr6_2:24195740-24195759 | None:intergenic | 35.0% |
| CTTCACAACGAATCAATGTT+AGG | - | chr6_2:24195738-24195757 | Msa0913400:CDS | 35.0% | |
| TCACAACGAATCAATGTTAG+GGG | - | chr6_2:24195740-24195759 | Msa0913400:CDS | 35.0% | |
| ! | TTTTTCCAACTCGAATTCCA+CGG | + | chr6_2:24195775-24195794 | None:intergenic | 35.0% |
| !! | AAAGTGCCGACAAGAAATAA+AGG | - | chr6_2:24195923-24195942 | Msa0913400:intron | 35.0% |
| !! | AAGGAAAGTCTTGTTTCTTG+AGG | - | chr6_2:24195976-24195995 | Msa0913400:intron | 35.0% |
| ! | ATCTCTGAAAACTTCTTCGA+CGG | + | chr6_2:24196051-24196070 | None:intergenic | 35.0% |
| ATAGAACTCTTCAACATCAG+TGG | + | chr6_2:24196111-24196130 | None:intergenic | 35.0% | |
| GGAAGTCAATTTACCTTCTA+AGG | - | chr6_2:24196190-24196209 | Msa0913400:intron | 35.0% | |
| ATCACTATGAACAGCAACTA+AGG | + | chr6_2:24196294-24196313 | None:intergenic | 35.0% | |
| !! | ATTTCAGGTTAAGCAGACTA+AGG | - | chr6_2:24196526-24196545 | Msa0913400:CDS | 35.0% |
| CTAATATGTCTGTTAGGAGT+TGG | - | chr6_2:24196709-24196728 | Msa0913400:CDS | 35.0% | |
| GAGATCAATCCAATAGCATA+AGG | - | chr6_2:24196742-24196761 | Msa0913400:CDS | 35.0% | |
| TCCAATAGCATAAGGAAAGA+AGG | + | chr6_2:24196861-24196880 | None:intergenic | 35.0% | |
| AAAGTTCTTCCATCTCTGAT+GGG | + | chr6_2:24197027-24197046 | None:intergenic | 35.0% | |
| AAAAGTTCTTCCATCTCTGA+TGG | + | chr6_2:24197028-24197047 | None:intergenic | 35.0% | |
| ! | AGAGATGGAAGAACTTTTTG+AGG | - | chr6_2:24197030-24197049 | Msa0913400:intron | 35.0% |
| !! | CTTTTTGAGGAAGATGAAGA+CGG | - | chr6_2:24197043-24197062 | Msa0913400:intron | 35.0% |
| TGATATTCACACATTTCCCA+TGG | + | chr6_2:24197150-24197169 | None:intergenic | 35.0% | |
| CTCTTGTAGTTATTGCATGA+TGG | + | chr6_2:24197211-24197230 | None:intergenic | 35.0% | |
| ATTCGTTGTGAAGGAAAAGA+AGG | + | chr6_2:24195731-24195750 | None:intergenic | 35.0% | |
| !! | CTAACATTGATTCGTTGTGA+AGG | + | chr6_2:24195740-24195759 | None:intergenic | 35.0% |
| CTTCACAACGAATCAATGTT+AGG | - | chr6_2:24195738-24195757 | Msa0913400:CDS | 35.0% | |
| TCACAACGAATCAATGTTAG+GGG | - | chr6_2:24195740-24195759 | Msa0913400:CDS | 35.0% | |
| ! | TTTTTCCAACTCGAATTCCA+CGG | + | chr6_2:24195775-24195794 | None:intergenic | 35.0% |
| !! | AAAGTGCCGACAAGAAATAA+AGG | - | chr6_2:24195923-24195942 | Msa0913400:intron | 35.0% |
| !! | AAGGAAAGTCTTGTTTCTTG+AGG | - | chr6_2:24195976-24195995 | Msa0913400:intron | 35.0% |
| ! | ATCTCTGAAAACTTCTTCGA+CGG | + | chr6_2:24196051-24196070 | None:intergenic | 35.0% |
| ATAGAACTCTTCAACATCAG+TGG | + | chr6_2:24196111-24196130 | None:intergenic | 35.0% | |
| GGAAGTCAATTTACCTTCTA+AGG | - | chr6_2:24196190-24196209 | Msa0913400:intron | 35.0% | |
| ATCACTATGAACAGCAACTA+AGG | + | chr6_2:24196294-24196313 | None:intergenic | 35.0% | |
| !! | ATTTCAGGTTAAGCAGACTA+AGG | - | chr6_2:24196526-24196545 | Msa0913400:CDS | 35.0% |
| CTAATATGTCTGTTAGGAGT+TGG | - | chr6_2:24196709-24196728 | Msa0913400:CDS | 35.0% | |
| GAGATCAATCCAATAGCATA+AGG | - | chr6_2:24196742-24196761 | Msa0913400:CDS | 35.0% | |
| TCCAATAGCATAAGGAAAGA+AGG | + | chr6_2:24196861-24196880 | None:intergenic | 35.0% | |
| AAAGTTCTTCCATCTCTGAT+GGG | + | chr6_2:24197027-24197046 | None:intergenic | 35.0% | |
| AAAAGTTCTTCCATCTCTGA+TGG | + | chr6_2:24197028-24197047 | None:intergenic | 35.0% | |
| ! | AGAGATGGAAGAACTTTTTG+AGG | - | chr6_2:24197030-24197049 | Msa0913400:intron | 35.0% |
| !! | CTTTTTGAGGAAGATGAAGA+CGG | - | chr6_2:24197043-24197062 | Msa0913400:intron | 35.0% |
| TGATATTCACACATTTCCCA+TGG | + | chr6_2:24197150-24197169 | None:intergenic | 35.0% | |
| CTCTTGTAGTTATTGCATGA+TGG | + | chr6_2:24197211-24197230 | None:intergenic | 35.0% | |
| ! | TTTTCCAACTCGAATTCCAC+GGG | + | chr6_2:24195774-24195793 | None:intergenic | 40.0% |
| GGAAAAAAAACACGTGTTCC+TGG | - | chr6_2:24195788-24195807 | Msa0913400:CDS | 40.0% | |
| !!! | CGTTGTTTGAGAGGCATTTT+CGG | + | chr6_2:24196007-24196026 | None:intergenic | 40.0% |
| CGAAAATGCCTCTCAAACAA+CGG | - | chr6_2:24196005-24196024 | Msa0913400:intron | 40.0% | |
| TTAAATCCCATCATAGGCTC+GGG | + | chr6_2:24196233-24196252 | None:intergenic | 40.0% | |
| GTTAAATCCCATCATAGGCT+CGG | + | chr6_2:24196234-24196253 | None:intergenic | 40.0% | |
| ATCGCATGCAAGAGAAAGAT+TGG | - | chr6_2:24196264-24196283 | Msa0913400:intron | 40.0% | |
| ! | TTGCTGTTCATAGTGATGCA+TGG | - | chr6_2:24196297-24196316 | Msa0913400:intron | 40.0% |
| TGATGCATGGTTAATTGCCA+TGG | - | chr6_2:24196310-24196329 | Msa0913400:intron | 40.0% | |
| GTGGATTTGACAAATCTGAC+AGG | - | chr6_2:24196354-24196373 | Msa0913400:intron | 40.0% | |
| !! | ACTTGGATTTGCTGCCATTA+TGG | + | chr6_2:24196478-24196497 | None:intergenic | 40.0% |
| !! | TCTGTTAGGAGTTGGTAGAA+AGG | - | chr6_2:24196717-24196736 | Msa0913400:CDS | 40.0% |
| CTCTCTCTCAATTTCTTAGG+AGG | - | chr6_2:24196835-24196854 | Msa0913400:CDS | 40.0% | |
| GCCTTCTTTCCTTATGCTAT+TGG | - | chr6_2:24196857-24196876 | Msa0913400:CDS | 40.0% | |
| ! | TGGATTTTTATCAGTCCTCG+TGG | - | chr6_2:24196877-24196896 | Msa0913400:CDS | 40.0% |
| ! | GGATTTTTATCAGTCCTCGT+GGG | - | chr6_2:24196878-24196897 | Msa0913400:CDS | 40.0% |
| GTAAAAATATCGATCCCACG+AGG | + | chr6_2:24196895-24196914 | None:intergenic | 40.0% | |
| CTCTCTCTCAATTTCTTAGG+AGG | - | chr6_2:24196835-24196854 | Msa0913400:CDS | 40.0% | |
| TCTGTGATATTTGTGAGAGG+TGG | - | chr6_2:24197122-24197141 | Msa0913400:intron | 40.0% | |
| AAATGTGTGAATATCACCCC+TGG | - | chr6_2:24197154-24197173 | Msa0913400:CDS | 40.0% | |
| ATTATGCTTAACCCTACCAG+GGG | + | chr6_2:24197173-24197192 | None:intergenic | 40.0% | |
| CATTATGCTTAACCCTACCA+GGG | + | chr6_2:24197174-24197193 | None:intergenic | 40.0% | |
| TCATTATGCTTAACCCTACC+AGG | + | chr6_2:24197175-24197194 | None:intergenic | 40.0% | |
| ! | TTTTCCAACTCGAATTCCAC+GGG | + | chr6_2:24195774-24195793 | None:intergenic | 40.0% |
| GGAAAAAAAACACGTGTTCC+TGG | - | chr6_2:24195788-24195807 | Msa0913400:CDS | 40.0% | |
| !!! | CGTTGTTTGAGAGGCATTTT+CGG | + | chr6_2:24196007-24196026 | None:intergenic | 40.0% |
| CGAAAATGCCTCTCAAACAA+CGG | - | chr6_2:24196005-24196024 | Msa0913400:intron | 40.0% | |
| TTAAATCCCATCATAGGCTC+GGG | + | chr6_2:24196233-24196252 | None:intergenic | 40.0% | |
| GTTAAATCCCATCATAGGCT+CGG | + | chr6_2:24196234-24196253 | None:intergenic | 40.0% | |
| ATCGCATGCAAGAGAAAGAT+TGG | - | chr6_2:24196264-24196283 | Msa0913400:intron | 40.0% | |
| ! | TTGCTGTTCATAGTGATGCA+TGG | - | chr6_2:24196297-24196316 | Msa0913400:intron | 40.0% |
| TGATGCATGGTTAATTGCCA+TGG | - | chr6_2:24196310-24196329 | Msa0913400:intron | 40.0% | |
| GTGGATTTGACAAATCTGAC+AGG | - | chr6_2:24196354-24196373 | Msa0913400:intron | 40.0% | |
| !! | ACTTGGATTTGCTGCCATTA+TGG | + | chr6_2:24196478-24196497 | None:intergenic | 40.0% |
| !! | TCTGTTAGGAGTTGGTAGAA+AGG | - | chr6_2:24196717-24196736 | Msa0913400:CDS | 40.0% |
| CTCTCTCTCAATTTCTTAGG+AGG | - | chr6_2:24196835-24196854 | Msa0913400:CDS | 40.0% | |
| GCCTTCTTTCCTTATGCTAT+TGG | - | chr6_2:24196857-24196876 | Msa0913400:CDS | 40.0% | |
| ! | TGGATTTTTATCAGTCCTCG+TGG | - | chr6_2:24196877-24196896 | Msa0913400:CDS | 40.0% |
| ! | GGATTTTTATCAGTCCTCGT+GGG | - | chr6_2:24196878-24196897 | Msa0913400:CDS | 40.0% |
| GTAAAAATATCGATCCCACG+AGG | + | chr6_2:24196895-24196914 | None:intergenic | 40.0% | |
| CTCTCTCTCAATTTCTTAGG+AGG | - | chr6_2:24196835-24196854 | Msa0913400:CDS | 40.0% | |
| TCTGTGATATTTGTGAGAGG+TGG | - | chr6_2:24197122-24197141 | Msa0913400:intron | 40.0% | |
| AAATGTGTGAATATCACCCC+TGG | - | chr6_2:24197154-24197173 | Msa0913400:CDS | 40.0% | |
| ATTATGCTTAACCCTACCAG+GGG | + | chr6_2:24197173-24197192 | None:intergenic | 40.0% | |
| CATTATGCTTAACCCTACCA+GGG | + | chr6_2:24197174-24197193 | None:intergenic | 40.0% | |
| TCATTATGCTTAACCCTACC+AGG | + | chr6_2:24197175-24197194 | None:intergenic | 40.0% | |
| AAATCCCGTGGAATTCGAGT+TGG | - | chr6_2:24195767-24195786 | Msa0913400:CDS | 45.0% | |
| ACTGTATGCCGTTGTTTGAG+AGG | + | chr6_2:24196016-24196035 | None:intergenic | 45.0% | |
| TAACCAATGTGACCCAGAGA+AGG | - | chr6_2:24196130-24196149 | Msa0913400:intron | 45.0% | |
| ATTGCCATGGCACACTACTT+TGG | - | chr6_2:24196323-24196342 | Msa0913400:intron | 45.0% | |
| TTGCCATGGCACACTACTTT+GGG | - | chr6_2:24196324-24196343 | Msa0913400:intron | 45.0% | |
| !! | GCAGCGGGCTATAAAATTTC+AGG | - | chr6_2:24196511-24196530 | Msa0913400:CDS | 45.0% |
| GGTTAAGCAGACTAAGGCTT+TGG | - | chr6_2:24196532-24196551 | Msa0913400:CDS | 45.0% | |
| AGCCATACTGTGTGCAGAAA+AGG | - | chr6_2:24196555-24196574 | Msa0913400:CDS | 45.0% | |
| CATCAGGCCTAAGAAGTTCA+AGG | - | chr6_2:24196592-24196611 | Msa0913400:CDS | 45.0% | |
| AGGGACTTGTGATAGACGTT+TGG | + | chr6_2:24196944-24196963 | None:intergenic | 45.0% | |
| ATTTGTGAGAGGTGGTTCCA+TGG | - | chr6_2:24197130-24197149 | Msa0913400:intron | 45.0% | |
| TTTGTGAGAGGTGGTTCCAT+GGG | - | chr6_2:24197131-24197150 | Msa0913400:intron | 45.0% | |
| TGTGAATATCACCCCTGGTA+GGG | - | chr6_2:24197159-24197178 | Msa0913400:CDS | 45.0% | |
| AAATCCCGTGGAATTCGAGT+TGG | - | chr6_2:24195767-24195786 | Msa0913400:CDS | 45.0% | |
| ACTGTATGCCGTTGTTTGAG+AGG | + | chr6_2:24196016-24196035 | None:intergenic | 45.0% | |
| TAACCAATGTGACCCAGAGA+AGG | - | chr6_2:24196130-24196149 | Msa0913400:intron | 45.0% | |
| ATTGCCATGGCACACTACTT+TGG | - | chr6_2:24196323-24196342 | Msa0913400:intron | 45.0% | |
| TTGCCATGGCACACTACTTT+GGG | - | chr6_2:24196324-24196343 | Msa0913400:intron | 45.0% | |
| !! | GCAGCGGGCTATAAAATTTC+AGG | - | chr6_2:24196511-24196530 | Msa0913400:CDS | 45.0% |
| GGTTAAGCAGACTAAGGCTT+TGG | - | chr6_2:24196532-24196551 | Msa0913400:CDS | 45.0% | |
| AGCCATACTGTGTGCAGAAA+AGG | - | chr6_2:24196555-24196574 | Msa0913400:CDS | 45.0% | |
| CATCAGGCCTAAGAAGTTCA+AGG | - | chr6_2:24196592-24196611 | Msa0913400:CDS | 45.0% | |
| AGGGACTTGTGATAGACGTT+TGG | + | chr6_2:24196944-24196963 | None:intergenic | 45.0% | |
| ATTTGTGAGAGGTGGTTCCA+TGG | - | chr6_2:24197130-24197149 | Msa0913400:intron | 45.0% | |
| TTTGTGAGAGGTGGTTCCAT+GGG | - | chr6_2:24197131-24197150 | Msa0913400:intron | 45.0% | |
| TGTGAATATCACCCCTGGTA+GGG | - | chr6_2:24197159-24197178 | Msa0913400:CDS | 45.0% | |
| GTTAGGGGAAAGAAATCCCG+TGG | - | chr6_2:24195755-24195774 | Msa0913400:CDS | 50.0% | |
| TCCTGGCAAAACTTGTCAGC+AGG | - | chr6_2:24195805-24195824 | Msa0913400:CDS | 50.0% | |
| ! | ACCTGCTGACAAGTTTTGCC+AGG | + | chr6_2:24195809-24195828 | None:intergenic | 50.0% |
| TCTCCTTCTCTGGGTCACAT+TGG | + | chr6_2:24196136-24196155 | None:intergenic | 50.0% | |
| ACAGTTTCCCTAGTGAGCAG+TGG | - | chr6_2:24196168-24196187 | Msa0913400:intron | 50.0% | |
| CAGTTTCCCTAGTGAGCAGT+GGG | - | chr6_2:24196169-24196188 | Msa0913400:intron | 50.0% | |
| TGACTTCCCACTGCTCACTA+GGG | + | chr6_2:24196178-24196197 | None:intergenic | 50.0% | |
| TTGACTTCCCACTGCTCACT+AGG | + | chr6_2:24196179-24196198 | None:intergenic | 50.0% | |
| TCTGGGGGAACTTCCTTAGA+AGG | + | chr6_2:24196206-24196225 | None:intergenic | 50.0% | |
| TCATAGGCTCGGGAAGATCT+GGG | + | chr6_2:24196223-24196242 | None:intergenic | 50.0% | |
| ATCATAGGCTCGGGAAGATC+TGG | + | chr6_2:24196224-24196243 | None:intergenic | 50.0% | |
| AGATCTTCCCGAGCCTATGA+TGG | - | chr6_2:24196223-24196242 | Msa0913400:intron | 50.0% | |
| GATCTTCCCGAGCCTATGAT+GGG | - | chr6_2:24196224-24196243 | Msa0913400:intron | 50.0% | |
| TGCCATGGCACACTACTTTG+GGG | - | chr6_2:24196325-24196344 | Msa0913400:intron | 50.0% | |
| !! | CACTACTTTGGGGCAAGATG+TGG | - | chr6_2:24196335-24196354 | Msa0913400:intron | 50.0% |
| !! | CTGCACTTTCGAGTTGCACT+TGG | + | chr6_2:24196495-24196514 | None:intergenic | 50.0% |
| ! | AGTGCAACTCGAAAGTGCAG+CGG | - | chr6_2:24196495-24196514 | Msa0913400:CDS | 50.0% |
| ! | GGCCTTTTCTGCACACAGTA+TGG | + | chr6_2:24196560-24196579 | None:intergenic | 50.0% |
| ! | GGCCTGATGATGTCTCTCTT+GGG | + | chr6_2:24196581-24196600 | None:intergenic | 50.0% |
| ! | AGGCCTGATGATGTCTCTCT+TGG | + | chr6_2:24196582-24196601 | None:intergenic | 50.0% |
| GAAGACGGAGAGAACTCATG+TGG | - | chr6_2:24197058-24197077 | Msa0913400:intron | 50.0% | |
| GAGAACTCATGTGGTGCATG+CGG | - | chr6_2:24197067-24197086 | Msa0913400:intron | 50.0% | |
| GTGTGAATATCACCCCTGGT+AGG | - | chr6_2:24197158-24197177 | Msa0913400:CDS | 50.0% | |
| GTTAGGGGAAAGAAATCCCG+TGG | - | chr6_2:24195755-24195774 | Msa0913400:CDS | 50.0% | |
| TCCTGGCAAAACTTGTCAGC+AGG | - | chr6_2:24195805-24195824 | Msa0913400:CDS | 50.0% | |
| ! | ACCTGCTGACAAGTTTTGCC+AGG | + | chr6_2:24195809-24195828 | None:intergenic | 50.0% |
| TCTCCTTCTCTGGGTCACAT+TGG | + | chr6_2:24196136-24196155 | None:intergenic | 50.0% | |
| ACAGTTTCCCTAGTGAGCAG+TGG | - | chr6_2:24196168-24196187 | Msa0913400:intron | 50.0% | |
| CAGTTTCCCTAGTGAGCAGT+GGG | - | chr6_2:24196169-24196188 | Msa0913400:intron | 50.0% | |
| TGACTTCCCACTGCTCACTA+GGG | + | chr6_2:24196178-24196197 | None:intergenic | 50.0% | |
| TTGACTTCCCACTGCTCACT+AGG | + | chr6_2:24196179-24196198 | None:intergenic | 50.0% | |
| TCTGGGGGAACTTCCTTAGA+AGG | + | chr6_2:24196206-24196225 | None:intergenic | 50.0% | |
| TCATAGGCTCGGGAAGATCT+GGG | + | chr6_2:24196223-24196242 | None:intergenic | 50.0% | |
| ATCATAGGCTCGGGAAGATC+TGG | + | chr6_2:24196224-24196243 | None:intergenic | 50.0% | |
| AGATCTTCCCGAGCCTATGA+TGG | - | chr6_2:24196223-24196242 | Msa0913400:intron | 50.0% | |
| GATCTTCCCGAGCCTATGAT+GGG | - | chr6_2:24196224-24196243 | Msa0913400:intron | 50.0% | |
| TGCCATGGCACACTACTTTG+GGG | - | chr6_2:24196325-24196344 | Msa0913400:intron | 50.0% | |
| !! | CACTACTTTGGGGCAAGATG+TGG | - | chr6_2:24196335-24196354 | Msa0913400:intron | 50.0% |
| !! | CTGCACTTTCGAGTTGCACT+TGG | + | chr6_2:24196495-24196514 | None:intergenic | 50.0% |
| ! | AGTGCAACTCGAAAGTGCAG+CGG | - | chr6_2:24196495-24196514 | Msa0913400:CDS | 50.0% |
| ! | GGCCTTTTCTGCACACAGTA+TGG | + | chr6_2:24196560-24196579 | None:intergenic | 50.0% |
| ! | GGCCTGATGATGTCTCTCTT+GGG | + | chr6_2:24196581-24196600 | None:intergenic | 50.0% |
| ! | AGGCCTGATGATGTCTCTCT+TGG | + | chr6_2:24196582-24196601 | None:intergenic | 50.0% |
| GAAGACGGAGAGAACTCATG+TGG | - | chr6_2:24197058-24197077 | Msa0913400:intron | 50.0% | |
| GAGAACTCATGTGGTGCATG+CGG | - | chr6_2:24197067-24197086 | Msa0913400:intron | 50.0% | |
| GTGTGAATATCACCCCTGGT+AGG | - | chr6_2:24197158-24197177 | Msa0913400:CDS | 50.0% | |
| GATTTCAATGGTCGTCGCGC+TGG | - | chr6_2:24196068-24196087 | Msa0913400:intron | 55.0% | |
| ACCCAGAGAAGGAGAGTCTG+TGG | - | chr6_2:24196141-24196160 | Msa0913400:intron | 55.0% | |
| GCCACAGACTCTCCTTCTCT+GGG | + | chr6_2:24196145-24196164 | None:intergenic | 55.0% | |
| AGCCACAGACTCTCCTTCTC+TGG | + | chr6_2:24196146-24196165 | None:intergenic | 55.0% | |
| ATAGGCTCGGGAAGATCTGG+GGG | + | chr6_2:24196221-24196240 | None:intergenic | 55.0% | |
| CATAGGCTCGGGAAGATCTG+GGG | + | chr6_2:24196222-24196241 | None:intergenic | 55.0% | |
| TGCCCCAAAGTAGTGTGCCA+TGG | + | chr6_2:24196330-24196349 | None:intergenic | 55.0% | |
| ! | GTGCAACTCGAAAGTGCAGC+GGG | - | chr6_2:24196496-24196515 | Msa0913400:CDS | 55.0% |
| GGCCCAAGAGAGACATCATC+AGG | - | chr6_2:24196576-24196595 | Msa0913400:CDS | 55.0% | |
| GATTTCAATGGTCGTCGCGC+TGG | - | chr6_2:24196068-24196087 | Msa0913400:intron | 55.0% | |
| ACCCAGAGAAGGAGAGTCTG+TGG | - | chr6_2:24196141-24196160 | Msa0913400:intron | 55.0% | |
| GCCACAGACTCTCCTTCTCT+GGG | + | chr6_2:24196145-24196164 | None:intergenic | 55.0% | |
| AGCCACAGACTCTCCTTCTC+TGG | + | chr6_2:24196146-24196165 | None:intergenic | 55.0% | |
| ATAGGCTCGGGAAGATCTGG+GGG | + | chr6_2:24196221-24196240 | None:intergenic | 55.0% | |
| CATAGGCTCGGGAAGATCTG+GGG | + | chr6_2:24196222-24196241 | None:intergenic | 55.0% | |
| TGCCCCAAAGTAGTGTGCCA+TGG | + | chr6_2:24196330-24196349 | None:intergenic | 55.0% | |
| ! | GTGCAACTCGAAAGTGCAGC+GGG | - | chr6_2:24196496-24196515 | Msa0913400:CDS | 55.0% |
| GGCCCAAGAGAGACATCATC+AGG | - | chr6_2:24196576-24196595 | Msa0913400:CDS | 55.0% | |
| ! | TCGTCGCGCTGGTCTCATCA+AGG | - | chr6_2:24196079-24196098 | Msa0913400:intron | 60.0% |
| ! | CCATCTCTGATGGGCGTGTG+TGG | + | chr6_2:24197018-24197037 | None:intergenic | 60.0% |
| CCACACACGCCCATCAGAGA+TGG | - | chr6_2:24197015-24197034 | Msa0913400:CDS | 60.0% | |
| ! | TCGTCGCGCTGGTCTCATCA+AGG | - | chr6_2:24196079-24196098 | Msa0913400:intron | 60.0% |
| ! | CCATCTCTGATGGGCGTGTG+TGG | + | chr6_2:24197018-24197037 | None:intergenic | 60.0% |
| CCACACACGCCCATCAGAGA+TGG | - | chr6_2:24197015-24197034 | Msa0913400:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 24195722 | 24197243 | 24195722 | ID=Msa0913400;Name=Msa0913400 |
| chr6_2 | mRNA | 24195722 | 24197243 | 24195722 | ID=Msa0913400-mRNA-1;Parent=Msa0913400;Name=Msa0913400-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|0.66|0.5|0.66|3|0|306 |
| chr6_2 | exon | 24197139 | 24197243 | 24197139 | ID=Msa0913400-mRNA-1:exon:4746;Parent=Msa0913400-mRNA-1 |
| chr6_2 | exon | 24196433 | 24197038 | 24196433 | ID=Msa0913400-mRNA-1:exon:4745;Parent=Msa0913400-mRNA-1 |
| chr6_2 | exon | 24195722 | 24195931 | 24195722 | ID=Msa0913400-mRNA-1:exon:4744;Parent=Msa0913400-mRNA-1 |
| chr6_2 | CDS | 24197139 | 24197243 | 24197139 | ID=Msa0913400-mRNA-1:cds;Parent=Msa0913400-mRNA-1 |
| chr6_2 | CDS | 24196433 | 24197038 | 24196433 | ID=Msa0913400-mRNA-1:cds;Parent=Msa0913400-mRNA-1 |
| chr6_2 | CDS | 24195722 | 24195931 | 24195722 | ID=Msa0913400-mRNA-1:cds;Parent=Msa0913400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
