Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916500 | TKY57836.1 | 37.643 | 263 | 140 | 6 | 3 | 250 | 8 | 261 | 1.08e-50 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916500 | sp|O65508|NAC76_ARATH | 33.544 | 158 | 88 | 5 | 4 | 150 | 10 | 161 | 1.03e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0916500 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916500 | MtrunA17_Chr4g0050701 | 29.508 | 183 | 91 | 7 | 4 | 172 | 11 | 169 | 1.65e-17 | 78.2 |
| Msa0916500 | MtrunA17_Chr4g0056541 | 33.758 | 157 | 81 | 6 | 4 | 146 | 7 | 154 | 1.93e-17 | 80.5 |
| Msa0916500 | MtrunA17_Chr5g0405211 | 33.117 | 154 | 86 | 5 | 4 | 146 | 8 | 155 | 6.43e-17 | 79.0 |
| Msa0916500 | MtrunA17_Chr1g0183741 | 34.641 | 153 | 82 | 7 | 4 | 146 | 10 | 154 | 3.83e-16 | 75.9 |
| Msa0916500 | MtrunA17_Chr7g0263931 | 33.750 | 160 | 80 | 7 | 4 | 145 | 11 | 162 | 3.98e-16 | 76.6 |
| Msa0916500 | MtrunA17_Chr2g0318101 | 31.737 | 167 | 83 | 7 | 4 | 146 | 15 | 174 | 7.64e-16 | 75.9 |
| Msa0916500 | MtrunA17_Chr8g0345671 | 35.065 | 154 | 79 | 8 | 4 | 145 | 11 | 155 | 9.74e-16 | 75.9 |
| Msa0916500 | MtrunA17_Chr8g0372121 | 34.194 | 155 | 83 | 6 | 4 | 146 | 6 | 153 | 1.15e-15 | 75.1 |
| Msa0916500 | MtrunA17_Chr5g0417791 | 30.625 | 160 | 85 | 6 | 4 | 146 | 3 | 153 | 1.90e-15 | 73.6 |
| Msa0916500 | MtrunA17_Chr4g0047841 | 35.556 | 135 | 74 | 5 | 4 | 132 | 15 | 142 | 2.46e-15 | 74.3 |
| Msa0916500 | MtrunA17_Chr2g0326361 | 31.875 | 160 | 83 | 6 | 4 | 145 | 14 | 165 | 3.19e-15 | 73.9 |
| Msa0916500 | MtrunA17_Chr4g0017921 | 29.798 | 198 | 112 | 10 | 4 | 188 | 8 | 191 | 3.80e-15 | 73.9 |
| Msa0916500 | MtrunA17_Chr3g0128151 | 33.742 | 163 | 80 | 10 | 1 | 146 | 19 | 170 | 1.58e-14 | 72.8 |
| Msa0916500 | MtrunA17_Chr8g0361731 | 25.630 | 238 | 132 | 9 | 2 | 203 | 12 | 240 | 1.89e-14 | 72.0 |
| Msa0916500 | MtrunA17_Chr8g0384721 | 32.919 | 161 | 81 | 7 | 4 | 147 | 7 | 157 | 2.11e-14 | 71.2 |
| Msa0916500 | MtrunA17_Chr1g0147421 | 32.692 | 156 | 88 | 6 | 2 | 146 | 25 | 174 | 2.77e-14 | 71.6 |
| Msa0916500 | MtrunA17_Chr3g0109821 | 33.962 | 159 | 80 | 9 | 4 | 146 | 6 | 155 | 3.13e-14 | 72.0 |
| Msa0916500 | MtrunA17_Chr8g0345691 | 31.410 | 156 | 88 | 6 | 1 | 145 | 9 | 156 | 6.41e-14 | 70.5 |
| Msa0916500 | MtrunA17_Chr3g0128111 | 33.544 | 158 | 75 | 10 | 7 | 146 | 45 | 190 | 6.44e-14 | 69.3 |
| Msa0916500 | MtrunA17_Chr1g0197351 | 34.356 | 163 | 79 | 7 | 4 | 146 | 42 | 196 | 1.02e-13 | 70.1 |
| Msa0916500 | MtrunA17_Chr5g0400461 | 30.769 | 195 | 109 | 10 | 4 | 180 | 6 | 192 | 1.57e-13 | 69.3 |
| Msa0916500 | MtrunA17_Chr6g0453131 | 31.515 | 165 | 83 | 9 | 4 | 146 | 15 | 171 | 2.26e-13 | 68.9 |
| Msa0916500 | MtrunA17_Chr7g0214071 | 31.613 | 155 | 83 | 7 | 4 | 146 | 15 | 158 | 2.45e-13 | 67.8 |
| Msa0916500 | MtrunA17_Chr5g0428991 | 34.161 | 161 | 76 | 10 | 4 | 146 | 25 | 173 | 3.94e-13 | 68.6 |
| Msa0916500 | MtrunA17_Chr3g0144271 | 32.215 | 149 | 87 | 6 | 4 | 145 | 23 | 164 | 4.40e-13 | 68.2 |
| Msa0916500 | MtrunA17_Chr8g0346001 | 27.381 | 168 | 88 | 7 | 4 | 146 | 15 | 173 | 1.39e-12 | 66.6 |
| Msa0916500 | MtrunA17_Chr6g0484441 | 32.051 | 156 | 86 | 7 | 2 | 146 | 3 | 149 | 3.24e-12 | 65.1 |
| Msa0916500 | MtrunA17_Chr7g0252971 | 28.571 | 168 | 87 | 8 | 4 | 146 | 8 | 167 | 5.43e-12 | 64.7 |
| Msa0916500 | MtrunA17_Chr3g0130321 | 30.120 | 166 | 92 | 5 | 4 | 152 | 7 | 165 | 6.59e-12 | 63.2 |
| Msa0916500 | MtrunA17_Chr2g0316971 | 30.818 | 159 | 86 | 6 | 4 | 146 | 23 | 173 | 1.62e-11 | 63.5 |
| Msa0916500 | MtrunA17_Chr8g0345711 | 32.374 | 139 | 75 | 7 | 2 | 130 | 10 | 139 | 6.10e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0916500 | AT4G36160.1 | 33.544 | 158 | 88 | 5 | 4 | 150 | 10 | 161 | 1.05e-18 | 84.7 |
| Msa0916500 | AT4G36160.3 | 33.544 | 158 | 88 | 5 | 4 | 150 | 10 | 161 | 1.05e-18 | 84.7 |
| Msa0916500 | AT4G36160.2 | 33.544 | 158 | 88 | 5 | 4 | 150 | 14 | 165 | 1.11e-18 | 84.7 |
| Msa0916500 | AT1G71930.2 | 33.121 | 157 | 88 | 5 | 4 | 149 | 9 | 159 | 5.97e-18 | 82.0 |
| Msa0916500 | AT1G71930.1 | 33.121 | 157 | 88 | 5 | 4 | 149 | 9 | 159 | 5.97e-18 | 82.0 |
| Msa0916500 | AT2G24430.2 | 35.669 | 157 | 82 | 6 | 2 | 146 | 14 | 163 | 2.04e-17 | 80.5 |
| Msa0916500 | AT2G24430.1 | 35.669 | 157 | 82 | 6 | 2 | 146 | 14 | 163 | 2.04e-17 | 80.5 |
| Msa0916500 | AT2G18060.3 | 33.117 | 154 | 86 | 5 | 4 | 146 | 9 | 156 | 3.04e-17 | 80.5 |
| Msa0916500 | AT2G18060.1 | 33.117 | 154 | 86 | 5 | 4 | 146 | 9 | 156 | 3.04e-17 | 80.5 |
| Msa0916500 | AT4G28530.1 | 33.133 | 166 | 85 | 5 | 4 | 147 | 10 | 171 | 5.43e-16 | 76.6 |
| Msa0916500 | AT1G69490.1 | 32.500 | 160 | 82 | 7 | 4 | 146 | 9 | 159 | 5.87e-16 | 75.5 |
| Msa0916500 | AT1G26870.1 | 33.974 | 156 | 86 | 6 | 2 | 149 | 14 | 160 | 7.06e-16 | 76.6 |
| Msa0916500 | AT3G10490.1 | 33.544 | 158 | 82 | 7 | 4 | 146 | 27 | 176 | 2.70e-15 | 73.2 |
| Msa0916500 | AT4G10350.1 | 33.962 | 159 | 80 | 9 | 4 | 146 | 9 | 158 | 3.96e-15 | 74.3 |
| Msa0916500 | AT2G27300.1 | 29.452 | 146 | 93 | 4 | 4 | 145 | 14 | 153 | 6.48e-15 | 73.6 |
| Msa0916500 | AT4G17980.1 | 33.333 | 159 | 82 | 7 | 4 | 145 | 6 | 157 | 7.12e-15 | 72.4 |
| Msa0916500 | AT4G17980.2 | 33.125 | 160 | 83 | 7 | 3 | 145 | 5 | 157 | 8.61e-15 | 72.8 |
| Msa0916500 | AT5G08790.1 | 32.716 | 162 | 81 | 7 | 4 | 147 | 7 | 158 | 1.38e-14 | 72.0 |
| Msa0916500 | AT3G03200.1 | 34.375 | 160 | 78 | 9 | 4 | 146 | 6 | 155 | 1.49e-14 | 73.2 |
| Msa0916500 | AT5G64530.1 | 33.588 | 131 | 74 | 4 | 4 | 134 | 3 | 120 | 1.63e-14 | 70.1 |
| Msa0916500 | AT5G64530.2 | 33.588 | 131 | 74 | 4 | 4 | 134 | 3 | 120 | 1.76e-14 | 69.3 |
| Msa0916500 | AT1G54330.1 | 32.026 | 153 | 87 | 6 | 4 | 146 | 6 | 151 | 1.84e-14 | 72.0 |
| Msa0916500 | AT5G63790.1 | 32.716 | 162 | 81 | 7 | 4 | 147 | 50 | 201 | 3.65e-14 | 71.2 |
| Msa0916500 | AT5G63790.2 | 32.716 | 162 | 81 | 7 | 4 | 147 | 60 | 211 | 4.20e-14 | 71.2 |
| Msa0916500 | AT4G35580.3 | 31.902 | 163 | 89 | 8 | 1 | 149 | 6 | 160 | 6.98e-14 | 71.2 |
| Msa0916500 | AT4G35580.2 | 31.902 | 163 | 89 | 8 | 1 | 149 | 6 | 160 | 7.26e-14 | 71.2 |
| Msa0916500 | AT4G35580.1 | 31.902 | 163 | 89 | 8 | 1 | 149 | 6 | 160 | 9.07e-14 | 70.9 |
| Msa0916500 | AT1G61110.1 | 34.058 | 138 | 75 | 6 | 4 | 134 | 16 | 144 | 1.68e-13 | 69.3 |
| Msa0916500 | AT5G39610.1 | 32.278 | 158 | 83 | 7 | 4 | 146 | 20 | 168 | 1.82e-13 | 68.9 |
| Msa0916500 | AT5G39820.1 | 33.835 | 133 | 75 | 5 | 6 | 132 | 22 | 147 | 3.04e-13 | 68.6 |
| Msa0916500 | AT5G04410.1 | 31.646 | 158 | 84 | 6 | 4 | 146 | 9 | 157 | 3.36e-13 | 69.3 |
| Msa0916500 | AT5G13180.1 | 31.169 | 154 | 86 | 6 | 4 | 146 | 14 | 158 | 3.60e-13 | 67.8 |
| Msa0916500 | AT1G32770.1 | 28.729 | 181 | 85 | 8 | 4 | 149 | 16 | 187 | 5.05e-13 | 68.2 |
| Msa0916500 | AT2G46770.1 | 26.368 | 201 | 107 | 8 | 4 | 175 | 16 | 204 | 6.84e-13 | 67.8 |
| Msa0916500 | AT3G10500.1 | 32.278 | 158 | 83 | 7 | 4 | 146 | 9 | 157 | 7.56e-13 | 68.2 |
| Msa0916500 | AT3G15170.1 | 31.447 | 159 | 85 | 7 | 3 | 145 | 19 | 169 | 1.04e-12 | 67.0 |
| Msa0916500 | AT3G18400.1 | 31.646 | 158 | 87 | 8 | 2 | 147 | 3 | 151 | 1.32e-12 | 66.6 |
| Msa0916500 | AT4G27410.3 | 29.240 | 171 | 86 | 7 | 4 | 146 | 14 | 177 | 1.54e-12 | 66.6 |
| Msa0916500 | AT3G15510.1 | 29.814 | 161 | 82 | 7 | 10 | 146 | 23 | 176 | 2.01e-12 | 66.6 |
| Msa0916500 | AT3G29035.1 | 31.447 | 159 | 83 | 7 | 4 | 146 | 24 | 172 | 2.21e-12 | 66.2 |
| Msa0916500 | AT5G61430.1 | 32.278 | 158 | 83 | 7 | 4 | 146 | 16 | 164 | 3.75e-12 | 65.5 |
| Msa0916500 | AT5G22290.1 | 28.571 | 147 | 90 | 6 | 6 | 145 | 23 | 161 | 4.49e-12 | 65.5 |
| Msa0916500 | AT1G32870.1 | 32.331 | 133 | 79 | 5 | 4 | 132 | 10 | 135 | 8.10e-12 | 65.1 |
| Msa0916500 | AT1G32870.2 | 32.331 | 133 | 79 | 5 | 4 | 132 | 10 | 135 | 9.18e-12 | 64.7 |
| Msa0916500 | AT2G17040.1 | 30.323 | 155 | 82 | 7 | 6 | 146 | 8 | 150 | 1.03e-11 | 63.9 |
| Msa0916500 | AT1G32870.3 | 32.331 | 133 | 79 | 5 | 4 | 132 | 46 | 171 | 1.20e-11 | 64.7 |
| Msa0916500 | AT5G53950.1 | 29.814 | 161 | 89 | 6 | 2 | 146 | 15 | 167 | 3.00e-11 | 63.2 |
| Msa0916500 | AT5G46590.2 | 32.374 | 139 | 80 | 6 | 4 | 135 | 6 | 137 | 3.79e-11 | 62.4 |
| Msa0916500 | AT5G04395.1 | 32.000 | 150 | 79 | 7 | 4 | 135 | 28 | 172 | 3.88e-11 | 60.8 |
Find 48 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACTAATGCTTTCAATTA+TGG | 0.184656 | 6_2:-37603619 | Msa0916500:CDS |
| CAATGGTTCTGACTTGATTA+AGG | 0.258416 | 6_2:-37605804 | Msa0916500:CDS |
| GGCAATGTAAGATTGGATTT+TGG | 0.279853 | 6_2:-37605670 | Msa0916500:CDS |
| CCTTGGGTGACGGAAGAAAA+AGG | 0.350861 | 6_2:+37605733 | None:intergenic |
| ATTGAAAGCATTAGTTGCTC+TGG | 0.380713 | 6_2:+37603624 | None:intergenic |
| ATGGATCTGGATGTTGAGTT+TGG | 0.395501 | 6_2:-37605343 | Msa0916500:CDS |
| CCTCATCTGCTCATCAACTT+TGG | 0.414860 | 6_2:+37605691 | None:intergenic |
| GAAGAGGTTCAAAATTTCAA+TGG | 0.434760 | 6_2:-37605821 | Msa0916500:CDS |
| GGAGTAAGACGCAATTCAAA+TGG | 0.441267 | 6_2:+37605758 | None:intergenic |
| GTTGTTCGAGACATTATTGT+TGG | 0.455577 | 6_2:-37605635 | Msa0916500:CDS |
| GCAATTCAAATGGGTCATAC+TGG | 0.459319 | 6_2:+37605768 | None:intergenic |
| CAGATGAGGCAATGTAAGAT+TGG | 0.462721 | 6_2:-37605677 | Msa0916500:CDS |
| TTGAAAGCATTAGTTGCTCT+GGG | 0.473709 | 6_2:+37603625 | None:intergenic |
| CGAAGTTACTCAGAAACCTA+TGG | 0.482750 | 6_2:-37605266 | Msa0916500:CDS |
| GAATTGCTTCCACCTGGTGT+TGG | 0.483908 | 6_2:-37605899 | Msa0916500:CDS |
| AACACACGACAAAGAACAAA+AGG | 0.484780 | 6_2:+37605382 | None:intergenic |
| TCAATTAATTTACACAAGAT+CGG | 0.501330 | 6_2:+37603575 | None:intergenic |
| GTGAAGCAGTAAAATTCCCT+TGG | 0.511128 | 6_2:+37605716 | None:intergenic |
| AGAATGGCATCAAAACTAGT+TGG | 0.512078 | 6_2:-37605550 | Msa0916500:CDS |
| CTGCCCACCAGAGATGGATC+TGG | 0.513629 | 6_2:-37605356 | Msa0916500:CDS |
| TCAACATCCAGATCCATCTC+TGG | 0.528153 | 6_2:+37605349 | None:intergenic |
| CACTCTTGCTAACAATCCTC+AGG | 0.528444 | 6_2:-37605513 | Msa0916500:intron |
| GTTGATGAAGGTGATGCTAC+TGG | 0.539280 | 6_2:-37605313 | Msa0916500:CDS |
| AGTAAAATTCCCTTGGGTGA+CGG | 0.539767 | 6_2:+37605723 | None:intergenic |
| GAAGGTGATGCTACTGGAGA+TGG | 0.546862 | 6_2:-37605307 | Msa0916500:CDS |
| GAGTAAGACGCAATTCAAAT+GGG | 0.549774 | 6_2:+37605759 | None:intergenic |
| TGAAGCAGTAAAATTCCCTT+GGG | 0.559532 | 6_2:+37605717 | None:intergenic |
| CCAAAGTTGATGAGCAGATG+AGG | 0.560720 | 6_2:-37605691 | Msa0916500:CDS |
| ACATCCAGATCCATCTCTGG+TGG | 0.568257 | 6_2:+37605352 | None:intergenic |
| GAAGTTACTCAGAAACCTAT+GGG | 0.580237 | 6_2:-37605265 | Msa0916500:CDS |
| GAAGGGATGAAGCCAACACC+AGG | 0.588550 | 6_2:+37605887 | None:intergenic |
| TTTGGAGCAGATGTTGATGA+AGG | 0.590115 | 6_2:-37605325 | Msa0916500:CDS |
| ATAGGAAATTCCGCTCAGAA+TGG | 0.595921 | 6_2:-37605566 | Msa0916500:CDS |
| GTTTGACTGCCCACCAGAGA+TGG | 0.602762 | 6_2:-37605362 | Msa0916500:CDS |
| TGTTGGAACTGATAACGTGT+TGG | 0.614058 | 6_2:-37605618 | Msa0916500:CDS |
| TAACAAGGAGTTCATCAGAA+GGG | 0.616296 | 6_2:+37605870 | None:intergenic |
| GCAATGGAATTGCTTCCACC+TGG | 0.624048 | 6_2:-37605905 | Msa0916500:CDS |
| TGGAACTGATAACGTGTTGG+TGG | 0.634013 | 6_2:-37605615 | Msa0916500:CDS |
| TGACGATGTTGTCTTGCACA+TGG | 0.636821 | 6_2:-37603658 | Msa0916500:CDS |
| TGGCAAGGTAGTAGATAACA+AGG | 0.641793 | 6_2:+37605855 | None:intergenic |
| ATAACAAGGAGTTCATCAGA+AGG | 0.650392 | 6_2:+37605869 | None:intergenic |
| CATCCAGATCCATCTCTGGT+GGG | 0.656418 | 6_2:+37605353 | None:intergenic |
| GGGATGAAGCCAACACCAGG+TGG | 0.665656 | 6_2:+37605890 | None:intergenic |
| GGAACTGATAACGTGTTGGT+GGG | 0.675682 | 6_2:-37605614 | Msa0916500:CDS |
| AAGTTACTCAGAAACCTATG+GGG | 0.699471 | 6_2:-37605264 | Msa0916500:CDS |
| AGTGCTGCTGTTGAGCAACG+CGG | 0.701822 | 6_2:-37605220 | Msa0916500:CDS |
| TGAAAGCATTAGTTGCTCTG+GGG | 0.714933 | 6_2:+37603626 | None:intergenic |
| AGTTACTCAGAAACCTATGG+GGG | 0.738835 | 6_2:-37605263 | Msa0916500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAAATTATTATGC+AGG | - | chr6_2:37604079-37604098 | Msa0916500:intron | 10.0% |
| !! | TATTATTATTATTATGAGTT+AGG | - | chr6_2:37604705-37604724 | Msa0916500:intron | 10.0% |
| !! | AATAAAATTAAATTGTAATG+AGG | + | chr6_2:37605211-37605230 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAAATTATTATGC+AGG | - | chr6_2:37604079-37604098 | Msa0916500:intron | 10.0% |
| !! | TATTATTATTATTATGAGTT+AGG | - | chr6_2:37604705-37604724 | Msa0916500:intron | 10.0% |
| !! | AATAAAATTAAATTGTAATG+AGG | + | chr6_2:37605211-37605230 | None:intergenic | 10.0% |
| !!! | TTTTAATTCATATTCAATCA+TGG | + | chr6_2:37605113-37605132 | None:intergenic | 15.0% |
| !! | ATATGAATTAAAATAATCCT+AGG | - | chr6_2:37605120-37605139 | Msa0916500:intron | 15.0% |
| !!! | GTATTTTAATTATTCAGATA+TGG | - | chr6_2:37605347-37605366 | Msa0916500:CDS | 15.0% |
| !! | CTTTGATTAAATAAAATCAA+CGG | - | chr6_2:37605517-37605536 | Msa0916500:CDS | 15.0% |
| !! | ATAATAATAATAATAGAGTC+AGG | + | chr6_2:37605590-37605609 | None:intergenic | 15.0% |
| !!! | TTTTAATTCATATTCAATCA+TGG | + | chr6_2:37605113-37605132 | None:intergenic | 15.0% |
| !! | ATATGAATTAAAATAATCCT+AGG | - | chr6_2:37605120-37605139 | Msa0916500:intron | 15.0% |
| !!! | GTATTTTAATTATTCAGATA+TGG | - | chr6_2:37605347-37605366 | Msa0916500:CDS | 15.0% |
| !! | CTTTGATTAAATAAAATCAA+CGG | - | chr6_2:37605517-37605536 | Msa0916500:CDS | 15.0% |
| !! | ATAATAATAATAATAGAGTC+AGG | + | chr6_2:37605590-37605609 | None:intergenic | 15.0% |
| !!! | TCTCTTTTTATGTTCTATAT+AGG | - | chr6_2:37603902-37603921 | Msa0916500:intron | 20.0% |
| !! | AATACATTAAATAATCATCG+AGG | + | chr6_2:37604041-37604060 | None:intergenic | 20.0% |
| !! | AATATAAAGAGAGATCAAAA+TGG | + | chr6_2:37604341-37604360 | None:intergenic | 20.0% |
| !! | ATAAGATCAACAACATTAAT+TGG | + | chr6_2:37604366-37604385 | None:intergenic | 20.0% |
| !! | TGATAATTCTCAAAACATAT+AGG | - | chr6_2:37604545-37604564 | Msa0916500:intron | 20.0% |
| !!! | AAGAAACATGGATTAATTAT+GGG | + | chr6_2:37604777-37604796 | None:intergenic | 20.0% |
| !!! | AAAGAAACATGGATTAATTA+TGG | + | chr6_2:37604778-37604797 | None:intergenic | 20.0% |
| !! | AGAAGAAGAATAATATTCAT+AGG | + | chr6_2:37604932-37604951 | None:intergenic | 20.0% |
| !! | CTTATGATAACAATTACAAT+TGG | - | chr6_2:37605021-37605040 | Msa0916500:intron | 20.0% |
| !!! | CGTTGATTTTATTTAATCAA+AGG | + | chr6_2:37605519-37605538 | None:intergenic | 20.0% |
| !!! | CAACTTTTCATTTCATATTA+TGG | - | chr6_2:37605724-37605743 | Msa0916500:CDS | 20.0% |
| !!! | TCTCTTTTTATGTTCTATAT+AGG | - | chr6_2:37603902-37603921 | Msa0916500:intron | 20.0% |
| !! | AATACATTAAATAATCATCG+AGG | + | chr6_2:37604041-37604060 | None:intergenic | 20.0% |
| !! | AATATAAAGAGAGATCAAAA+TGG | + | chr6_2:37604341-37604360 | None:intergenic | 20.0% |
| !! | ATAAGATCAACAACATTAAT+TGG | + | chr6_2:37604366-37604385 | None:intergenic | 20.0% |
| !! | TGATAATTCTCAAAACATAT+AGG | - | chr6_2:37604545-37604564 | Msa0916500:intron | 20.0% |
| !!! | AAGAAACATGGATTAATTAT+GGG | + | chr6_2:37604777-37604796 | None:intergenic | 20.0% |
| !!! | AAAGAAACATGGATTAATTA+TGG | + | chr6_2:37604778-37604797 | None:intergenic | 20.0% |
| !! | AGAAGAAGAATAATATTCAT+AGG | + | chr6_2:37604932-37604951 | None:intergenic | 20.0% |
| !! | CTTATGATAACAATTACAAT+TGG | - | chr6_2:37605021-37605040 | Msa0916500:intron | 20.0% |
| !!! | CGTTGATTTTATTTAATCAA+AGG | + | chr6_2:37605519-37605538 | None:intergenic | 20.0% |
| !!! | CAACTTTTCATTTCATATTA+TGG | - | chr6_2:37605724-37605743 | Msa0916500:CDS | 20.0% |
| !!! | AACCTCTTCATTATTTTTGT+TGG | + | chr6_2:37603654-37603673 | None:intergenic | 25.0% |
| !! | TCAAATTTCACAGATTTTGA+AGG | - | chr6_2:37604293-37604312 | Msa0916500:intron | 25.0% |
| ! | TACATTTAGTAGCAAAGATT+GGG | + | chr6_2:37604460-37604479 | None:intergenic | 25.0% |
| ! | TTACATTTAGTAGCAAAGAT+TGG | + | chr6_2:37604461-37604480 | None:intergenic | 25.0% |
| ! | ATACACAAGAAAAAGAAACA+TGG | + | chr6_2:37604789-37604808 | None:intergenic | 25.0% |
| ! | AAAAACTCAAACTGAAAACA+TGG | - | chr6_2:37604851-37604870 | Msa0916500:intron | 25.0% |
| ! | AGAATAATATTCATAGGAGT+GGG | + | chr6_2:37604926-37604945 | None:intergenic | 25.0% |
| ! | AAGAATAATATTCATAGGAG+TGG | + | chr6_2:37604927-37604946 | None:intergenic | 25.0% |
| !! | GTTTAAAACGATAAAATCCT+AGG | + | chr6_2:37605140-37605159 | None:intergenic | 25.0% |
| ! | AGAACAAAGAGAATTATGAT+AGG | - | chr6_2:37605393-37605412 | Msa0916500:intron | 25.0% |
| ! | ATAGTGTGTGATTGAAAAAA+AGG | - | chr6_2:37605458-37605477 | Msa0916500:intron | 25.0% |
| ! | AATACTTCAACAATACATTC+TGG | + | chr6_2:37605756-37605775 | None:intergenic | 25.0% |
| !!! | TGAATTGATTTGCTTGTTTT+TGG | - | chr6_2:37605775-37605794 | Msa0916500:CDS | 25.0% |
| !!! | AACCTCTTCATTATTTTTGT+TGG | + | chr6_2:37603654-37603673 | None:intergenic | 25.0% |
| !! | TCAAATTTCACAGATTTTGA+AGG | - | chr6_2:37604293-37604312 | Msa0916500:intron | 25.0% |
| ! | TACATTTAGTAGCAAAGATT+GGG | + | chr6_2:37604460-37604479 | None:intergenic | 25.0% |
| ! | TTACATTTAGTAGCAAAGAT+TGG | + | chr6_2:37604461-37604480 | None:intergenic | 25.0% |
| ! | ATACACAAGAAAAAGAAACA+TGG | + | chr6_2:37604789-37604808 | None:intergenic | 25.0% |
| ! | AAAAACTCAAACTGAAAACA+TGG | - | chr6_2:37604851-37604870 | Msa0916500:intron | 25.0% |
| ! | AGAATAATATTCATAGGAGT+GGG | + | chr6_2:37604926-37604945 | None:intergenic | 25.0% |
| ! | AAGAATAATATTCATAGGAG+TGG | + | chr6_2:37604927-37604946 | None:intergenic | 25.0% |
| !! | GTTTAAAACGATAAAATCCT+AGG | + | chr6_2:37605140-37605159 | None:intergenic | 25.0% |
| ! | AGAACAAAGAGAATTATGAT+AGG | - | chr6_2:37605393-37605412 | Msa0916500:intron | 25.0% |
| ! | ATAGTGTGTGATTGAAAAAA+AGG | - | chr6_2:37605458-37605477 | Msa0916500:intron | 25.0% |
| ! | AATACTTCAACAATACATTC+TGG | + | chr6_2:37605756-37605775 | None:intergenic | 25.0% |
| !!! | TGAATTGATTTGCTTGTTTT+TGG | - | chr6_2:37605775-37605794 | Msa0916500:CDS | 25.0% |
| !!! | CTTCATTATTTTTGTTGGCA+AGG | + | chr6_2:37603649-37603668 | None:intergenic | 30.0% |
| TGCCAACAAAAATAATGAAG+AGG | - | chr6_2:37603649-37603668 | Msa0916500:CDS | 30.0% | |
| GAAGAGGTTCAAAATTTCAA+TGG | - | chr6_2:37603665-37603684 | Msa0916500:CDS | 30.0% | |
| ! | TGGAATATATTTTACCTGCA+GGG | + | chr6_2:37604321-37604340 | None:intergenic | 30.0% |
| ! | ATGGAATATATTTTACCTGC+AGG | + | chr6_2:37604322-37604341 | None:intergenic | 30.0% |
| ACATTTAGTAGCAAAGATTG+GGG | + | chr6_2:37604459-37604478 | None:intergenic | 30.0% | |
| TAAAAGCAATAATTGTGCGT+GGG | + | chr6_2:37604823-37604842 | None:intergenic | 30.0% | |
| ! | ATACTCAACGATTCTCTTTT+GGG | - | chr6_2:37604881-37604900 | Msa0916500:intron | 30.0% |
| AATAATATTCATAGGAGTGG+GGG | + | chr6_2:37604924-37604943 | None:intergenic | 30.0% | |
| GAATAATATTCATAGGAGTG+GGG | + | chr6_2:37604925-37604944 | None:intergenic | 30.0% | |
| ATACGAGGAGTTAAATAAGA+GGG | + | chr6_2:37604968-37604987 | None:intergenic | 30.0% | |
| GATAACAATTACAATTGGAG+AGG | - | chr6_2:37605026-37605045 | Msa0916500:intron | 30.0% | |
| ATTACAATTGGAGAGGAATA+TGG | - | chr6_2:37605033-37605052 | Msa0916500:intron | 30.0% | |
| TGTCTACAAAATGAATCGTA+TGG | - | chr6_2:37605167-37605186 | Msa0916500:intron | 30.0% | |
| ! | CAAAATGAATCGTATGGTTT+TGG | - | chr6_2:37605173-37605192 | Msa0916500:intron | 30.0% |
| ! | AATTGGTTCAATTAGCATGT+AGG | - | chr6_2:37605290-37605309 | Msa0916500:CDS | 30.0% |
| ATAGGATTATGCTTCCAATT+TGG | - | chr6_2:37605411-37605430 | Msa0916500:intron | 30.0% | |
| TAGGATTATGCTTCCAATTT+GGG | - | chr6_2:37605412-37605431 | Msa0916500:intron | 30.0% | |
| AATGATTACCAAACCCAAAT+TGG | + | chr6_2:37605428-37605447 | None:intergenic | 30.0% | |
| TAAAATCAACGGTTGAGATT+TGG | - | chr6_2:37605528-37605547 | Msa0916500:CDS | 30.0% | |
| GCAACTAATGCTTTCAATTA+TGG | - | chr6_2:37605867-37605886 | Msa0916500:CDS | 30.0% | |
| !!! | CTTCATTATTTTTGTTGGCA+AGG | + | chr6_2:37603649-37603668 | None:intergenic | 30.0% |
| TGCCAACAAAAATAATGAAG+AGG | - | chr6_2:37603649-37603668 | Msa0916500:CDS | 30.0% | |
| GAAGAGGTTCAAAATTTCAA+TGG | - | chr6_2:37603665-37603684 | Msa0916500:CDS | 30.0% | |
| ! | TGGAATATATTTTACCTGCA+GGG | + | chr6_2:37604321-37604340 | None:intergenic | 30.0% |
| ! | ATGGAATATATTTTACCTGC+AGG | + | chr6_2:37604322-37604341 | None:intergenic | 30.0% |
| ACATTTAGTAGCAAAGATTG+GGG | + | chr6_2:37604459-37604478 | None:intergenic | 30.0% | |
| TAAAAGCAATAATTGTGCGT+GGG | + | chr6_2:37604823-37604842 | None:intergenic | 30.0% | |
| ! | ATACTCAACGATTCTCTTTT+GGG | - | chr6_2:37604881-37604900 | Msa0916500:intron | 30.0% |
| AATAATATTCATAGGAGTGG+GGG | + | chr6_2:37604924-37604943 | None:intergenic | 30.0% | |
| GAATAATATTCATAGGAGTG+GGG | + | chr6_2:37604925-37604944 | None:intergenic | 30.0% | |
| ATACGAGGAGTTAAATAAGA+GGG | + | chr6_2:37604968-37604987 | None:intergenic | 30.0% | |
| GATAACAATTACAATTGGAG+AGG | - | chr6_2:37605026-37605045 | Msa0916500:intron | 30.0% | |
| ATTACAATTGGAGAGGAATA+TGG | - | chr6_2:37605033-37605052 | Msa0916500:intron | 30.0% | |
| TGTCTACAAAATGAATCGTA+TGG | - | chr6_2:37605167-37605186 | Msa0916500:intron | 30.0% | |
| ! | CAAAATGAATCGTATGGTTT+TGG | - | chr6_2:37605173-37605192 | Msa0916500:intron | 30.0% |
| ! | AATTGGTTCAATTAGCATGT+AGG | - | chr6_2:37605290-37605309 | Msa0916500:CDS | 30.0% |
| ATAGGATTATGCTTCCAATT+TGG | - | chr6_2:37605411-37605430 | Msa0916500:intron | 30.0% | |
| TAGGATTATGCTTCCAATTT+GGG | - | chr6_2:37605412-37605431 | Msa0916500:intron | 30.0% | |
| AATGATTACCAAACCCAAAT+TGG | + | chr6_2:37605428-37605447 | None:intergenic | 30.0% | |
| TAAAATCAACGGTTGAGATT+TGG | - | chr6_2:37605528-37605547 | Msa0916500:CDS | 30.0% | |
| GCAACTAATGCTTTCAATTA+TGG | - | chr6_2:37605867-37605886 | Msa0916500:CDS | 30.0% | |
| TAACAAGGAGTTCATCAGAA+GGG | + | chr6_2:37603619-37603638 | None:intergenic | 35.0% | |
| ATAACAAGGAGTTCATCAGA+AGG | + | chr6_2:37603620-37603639 | None:intergenic | 35.0% | |
| !! | CAATGGTTCTGACTTGATTA+AGG | - | chr6_2:37603682-37603701 | Msa0916500:intron | 35.0% |
| GAGTAAGACGCAATTCAAAT+GGG | + | chr6_2:37603730-37603749 | None:intergenic | 35.0% | |
| TGAAGCAGTAAAATTCCCTT+GGG | + | chr6_2:37603772-37603791 | None:intergenic | 35.0% | |
| ! | GGCAATGTAAGATTGGATTT+TGG | - | chr6_2:37603816-37603835 | Msa0916500:intron | 35.0% |
| ! | ATTGGATTTTGGATGCAGAA+GGG | - | chr6_2:37603827-37603846 | Msa0916500:intron | 35.0% |
| GTTGTTCGAGACATTATTGT+TGG | - | chr6_2:37603851-37603870 | Msa0916500:intron | 35.0% | |
| AGAATGGCATCAAAACTAGT+TGG | - | chr6_2:37603936-37603955 | Msa0916500:intron | 35.0% | |
| AATCCTCAGGTATGGAATTT+GGG | - | chr6_2:37603986-37604005 | Msa0916500:intron | 35.0% | |
| AACACACGACAAAGAACAAA+AGG | + | chr6_2:37604107-37604126 | None:intergenic | 35.0% | |
| GAAGTTACTCAGAAACCTAT+GGG | - | chr6_2:37604221-37604240 | Msa0916500:intron | 35.0% | |
| AAGTTACTCAGAAACCTATG+GGG | - | chr6_2:37604222-37604241 | Msa0916500:intron | 35.0% | |
| AAGAACTGACGAATAAGCTT+TGG | + | chr6_2:37604742-37604761 | None:intergenic | 35.0% | |
| ! | CGTCAGTTCTTTTAATCCAA+AGG | - | chr6_2:37604751-37604770 | Msa0916500:intron | 35.0% |
| ! | ATGGATTAATTATGGGCCTT+TGG | + | chr6_2:37604770-37604789 | None:intergenic | 35.0% |
| CTAAAAGCAATAATTGTGCG+TGG | + | chr6_2:37604824-37604843 | None:intergenic | 35.0% | |
| ! | GATACTCAACGATTCTCTTT+TGG | - | chr6_2:37604880-37604899 | Msa0916500:intron | 35.0% |
| AGGAGTTAAATAAGAGGGAA+AGG | + | chr6_2:37604963-37604982 | None:intergenic | 35.0% | |
| CATACGAGGAGTTAAATAAG+AGG | + | chr6_2:37604969-37604988 | None:intergenic | 35.0% | |
| GTATGTATTGCAACACATGA+AGG | - | chr6_2:37604984-37605003 | Msa0916500:intron | 35.0% | |
| !!! | ATCGTATGGTTTTGGTAGAA+TGG | - | chr6_2:37605181-37605200 | Msa0916500:intron | 35.0% |
| AACAAAGTCACCACAAGTTT+GGG | - | chr6_2:37605257-37605276 | Msa0916500:CDS | 35.0% | |
| ! | TTATGCTTCCAATTTGGGTT+TGG | - | chr6_2:37605417-37605436 | Msa0916500:intron | 35.0% |
| !!! | GCTTGTTTTTGGTGTTTATC+AGG | - | chr6_2:37605786-37605805 | Msa0916500:CDS | 35.0% |
| !! | TTGAAAGCATTAGTTGCTCT+GGG | + | chr6_2:37605864-37605883 | None:intergenic | 35.0% |
| !! | ATTGAAAGCATTAGTTGCTC+TGG | + | chr6_2:37605865-37605884 | None:intergenic | 35.0% |
| TAACAAGGAGTTCATCAGAA+GGG | + | chr6_2:37603619-37603638 | None:intergenic | 35.0% | |
| ATAACAAGGAGTTCATCAGA+AGG | + | chr6_2:37603620-37603639 | None:intergenic | 35.0% | |
| !! | CAATGGTTCTGACTTGATTA+AGG | - | chr6_2:37603682-37603701 | Msa0916500:intron | 35.0% |
| GAGTAAGACGCAATTCAAAT+GGG | + | chr6_2:37603730-37603749 | None:intergenic | 35.0% | |
| TGAAGCAGTAAAATTCCCTT+GGG | + | chr6_2:37603772-37603791 | None:intergenic | 35.0% | |
| ! | GGCAATGTAAGATTGGATTT+TGG | - | chr6_2:37603816-37603835 | Msa0916500:intron | 35.0% |
| ! | ATTGGATTTTGGATGCAGAA+GGG | - | chr6_2:37603827-37603846 | Msa0916500:intron | 35.0% |
| GTTGTTCGAGACATTATTGT+TGG | - | chr6_2:37603851-37603870 | Msa0916500:intron | 35.0% | |
| AGAATGGCATCAAAACTAGT+TGG | - | chr6_2:37603936-37603955 | Msa0916500:intron | 35.0% | |
| AATCCTCAGGTATGGAATTT+GGG | - | chr6_2:37603986-37604005 | Msa0916500:intron | 35.0% | |
| AACACACGACAAAGAACAAA+AGG | + | chr6_2:37604107-37604126 | None:intergenic | 35.0% | |
| GAAGTTACTCAGAAACCTAT+GGG | - | chr6_2:37604221-37604240 | Msa0916500:intron | 35.0% | |
| AAGTTACTCAGAAACCTATG+GGG | - | chr6_2:37604222-37604241 | Msa0916500:intron | 35.0% | |
| AAGAACTGACGAATAAGCTT+TGG | + | chr6_2:37604742-37604761 | None:intergenic | 35.0% | |
| ! | CGTCAGTTCTTTTAATCCAA+AGG | - | chr6_2:37604751-37604770 | Msa0916500:intron | 35.0% |
| ! | ATGGATTAATTATGGGCCTT+TGG | + | chr6_2:37604770-37604789 | None:intergenic | 35.0% |
| CTAAAAGCAATAATTGTGCG+TGG | + | chr6_2:37604824-37604843 | None:intergenic | 35.0% | |
| ! | GATACTCAACGATTCTCTTT+TGG | - | chr6_2:37604880-37604899 | Msa0916500:intron | 35.0% |
| AGGAGTTAAATAAGAGGGAA+AGG | + | chr6_2:37604963-37604982 | None:intergenic | 35.0% | |
| CATACGAGGAGTTAAATAAG+AGG | + | chr6_2:37604969-37604988 | None:intergenic | 35.0% | |
| GTATGTATTGCAACACATGA+AGG | - | chr6_2:37604984-37605003 | Msa0916500:intron | 35.0% | |
| !!! | ATCGTATGGTTTTGGTAGAA+TGG | - | chr6_2:37605181-37605200 | Msa0916500:intron | 35.0% |
| AACAAAGTCACCACAAGTTT+GGG | - | chr6_2:37605257-37605276 | Msa0916500:CDS | 35.0% | |
| ! | TTATGCTTCCAATTTGGGTT+TGG | - | chr6_2:37605417-37605436 | Msa0916500:intron | 35.0% |
| !!! | GCTTGTTTTTGGTGTTTATC+AGG | - | chr6_2:37605786-37605805 | Msa0916500:CDS | 35.0% |
| !! | TTGAAAGCATTAGTTGCTCT+GGG | + | chr6_2:37605864-37605883 | None:intergenic | 35.0% |
| !! | ATTGAAAGCATTAGTTGCTC+TGG | + | chr6_2:37605865-37605884 | None:intergenic | 35.0% |
| TGGCAAGGTAGTAGATAACA+AGG | + | chr6_2:37603634-37603653 | None:intergenic | 40.0% | |
| GCAATTCAAATGGGTCATAC+TGG | + | chr6_2:37603721-37603740 | None:intergenic | 40.0% | |
| GGAGTAAGACGCAATTCAAA+TGG | + | chr6_2:37603731-37603750 | None:intergenic | 40.0% | |
| AGTAAAATTCCCTTGGGTGA+CGG | + | chr6_2:37603766-37603785 | None:intergenic | 40.0% | |
| GTGAAGCAGTAAAATTCCCT+TGG | + | chr6_2:37603773-37603792 | None:intergenic | 40.0% | |
| CAGATGAGGCAATGTAAGAT+TGG | - | chr6_2:37603809-37603828 | Msa0916500:intron | 40.0% | |
| ! | GATTGGATTTTGGATGCAGA+AGG | - | chr6_2:37603826-37603845 | Msa0916500:intron | 40.0% |
| ! | TTGGATTTTGGATGCAGAAG+GGG | - | chr6_2:37603828-37603847 | Msa0916500:intron | 40.0% |
| ! | TGTTGGAACTGATAACGTGT+TGG | - | chr6_2:37603868-37603887 | Msa0916500:intron | 40.0% |
| ATAGGAAATTCCGCTCAGAA+TGG | - | chr6_2:37603920-37603939 | Msa0916500:intron | 40.0% | |
| !! | AGTTTTGATGCCATTCTGAG+CGG | + | chr6_2:37603933-37603952 | None:intergenic | 40.0% |
| TTGCTAACAATCCTCAGGTA+TGG | - | chr6_2:37603978-37603997 | Msa0916500:intron | 40.0% | |
| CAATCCTCAGGTATGGAATT+TGG | - | chr6_2:37603985-37604004 | Msa0916500:intron | 40.0% | |
| TTTCCCAAATTCCATACCTG+AGG | + | chr6_2:37603992-37604011 | None:intergenic | 40.0% | |
| TCGAGGAAATCACGAACAAA+GGG | + | chr6_2:37604024-37604043 | None:intergenic | 40.0% | |
| ATCGAGGAAATCACGAACAA+AGG | + | chr6_2:37604025-37604044 | None:intergenic | 40.0% | |
| ATGGATCTGGATGTTGAGTT+TGG | - | chr6_2:37604143-37604162 | Msa0916500:intron | 40.0% | |
| ! | TTTGGAGCAGATGTTGATGA+AGG | - | chr6_2:37604161-37604180 | Msa0916500:intron | 40.0% |
| CGAAGTTACTCAGAAACCTA+TGG | - | chr6_2:37604220-37604239 | Msa0916500:intron | 40.0% | |
| AGTTACTCAGAAACCTATGG+GGG | - | chr6_2:37604223-37604242 | Msa0916500:intron | 40.0% | |
| AGGACGTGATTTGAAGAATC+TGG | + | chr6_2:37604601-37604620 | None:intergenic | 40.0% | |
| !! | CGAATAAGCTTTGGTGTCAA+CGG | + | chr6_2:37604733-37604752 | None:intergenic | 40.0% |
| CATGTGTTGCAATACATACG+AGG | + | chr6_2:37604983-37605002 | None:intergenic | 40.0% | |
| GAGAGGAATATGGTGAAAGT+AGG | - | chr6_2:37605043-37605062 | Msa0916500:intron | 40.0% | |
| CAACAAAGTCACCACAAGTT+TGG | - | chr6_2:37605256-37605275 | Msa0916500:CDS | 40.0% | |
| CATTGTCAAAAAGTGACGAC+AGG | + | chr6_2:37605704-37605723 | None:intergenic | 40.0% | |
| !! | TGAAAGCATTAGTTGCTCTG+GGG | + | chr6_2:37605863-37605882 | None:intergenic | 40.0% |
| TGGCAAGGTAGTAGATAACA+AGG | + | chr6_2:37603634-37603653 | None:intergenic | 40.0% | |
| GCAATTCAAATGGGTCATAC+TGG | + | chr6_2:37603721-37603740 | None:intergenic | 40.0% | |
| GGAGTAAGACGCAATTCAAA+TGG | + | chr6_2:37603731-37603750 | None:intergenic | 40.0% | |
| AGTAAAATTCCCTTGGGTGA+CGG | + | chr6_2:37603766-37603785 | None:intergenic | 40.0% | |
| GTGAAGCAGTAAAATTCCCT+TGG | + | chr6_2:37603773-37603792 | None:intergenic | 40.0% | |
| CAGATGAGGCAATGTAAGAT+TGG | - | chr6_2:37603809-37603828 | Msa0916500:intron | 40.0% | |
| ! | GATTGGATTTTGGATGCAGA+AGG | - | chr6_2:37603826-37603845 | Msa0916500:intron | 40.0% |
| ! | TTGGATTTTGGATGCAGAAG+GGG | - | chr6_2:37603828-37603847 | Msa0916500:intron | 40.0% |
| ! | TGTTGGAACTGATAACGTGT+TGG | - | chr6_2:37603868-37603887 | Msa0916500:intron | 40.0% |
| ATAGGAAATTCCGCTCAGAA+TGG | - | chr6_2:37603920-37603939 | Msa0916500:intron | 40.0% | |
| !! | AGTTTTGATGCCATTCTGAG+CGG | + | chr6_2:37603933-37603952 | None:intergenic | 40.0% |
| TTGCTAACAATCCTCAGGTA+TGG | - | chr6_2:37603978-37603997 | Msa0916500:intron | 40.0% | |
| CAATCCTCAGGTATGGAATT+TGG | - | chr6_2:37603985-37604004 | Msa0916500:intron | 40.0% | |
| TTTCCCAAATTCCATACCTG+AGG | + | chr6_2:37603992-37604011 | None:intergenic | 40.0% | |
| TCGAGGAAATCACGAACAAA+GGG | + | chr6_2:37604024-37604043 | None:intergenic | 40.0% | |
| ATCGAGGAAATCACGAACAA+AGG | + | chr6_2:37604025-37604044 | None:intergenic | 40.0% | |
| ATGGATCTGGATGTTGAGTT+TGG | - | chr6_2:37604143-37604162 | Msa0916500:intron | 40.0% | |
| ! | TTTGGAGCAGATGTTGATGA+AGG | - | chr6_2:37604161-37604180 | Msa0916500:intron | 40.0% |
| CGAAGTTACTCAGAAACCTA+TGG | - | chr6_2:37604220-37604239 | Msa0916500:intron | 40.0% | |
| AGTTACTCAGAAACCTATGG+GGG | - | chr6_2:37604223-37604242 | Msa0916500:intron | 40.0% | |
| AGGACGTGATTTGAAGAATC+TGG | + | chr6_2:37604601-37604620 | None:intergenic | 40.0% | |
| !! | CGAATAAGCTTTGGTGTCAA+CGG | + | chr6_2:37604733-37604752 | None:intergenic | 40.0% |
| CATGTGTTGCAATACATACG+AGG | + | chr6_2:37604983-37605002 | None:intergenic | 40.0% | |
| GAGAGGAATATGGTGAAAGT+AGG | - | chr6_2:37605043-37605062 | Msa0916500:intron | 40.0% | |
| CAACAAAGTCACCACAAGTT+TGG | - | chr6_2:37605256-37605275 | Msa0916500:CDS | 40.0% | |
| CATTGTCAAAAAGTGACGAC+AGG | + | chr6_2:37605704-37605723 | None:intergenic | 40.0% | |
| !! | TGAAAGCATTAGTTGCTCTG+GGG | + | chr6_2:37605863-37605882 | None:intergenic | 40.0% |
| ! | CTTTTTCTTCCGTCACCCAA+GGG | - | chr6_2:37603754-37603773 | Msa0916500:intron | 45.0% |
| CCTCATCTGCTCATCAACTT+TGG | + | chr6_2:37603798-37603817 | None:intergenic | 45.0% | |
| !! | CCAAAGTTGATGAGCAGATG+AGG | - | chr6_2:37603795-37603814 | Msa0916500:intron | 45.0% |
| ! | TGGATTTTGGATGCAGAAGG+GGG | - | chr6_2:37603829-37603848 | Msa0916500:intron | 45.0% |
| ! | TGGAACTGATAACGTGTTGG+TGG | - | chr6_2:37603871-37603890 | Msa0916500:intron | 45.0% |
| ! | GGAACTGATAACGTGTTGGT+GGG | - | chr6_2:37603872-37603891 | Msa0916500:intron | 45.0% |
| CACTCTTGCTAACAATCCTC+AGG | - | chr6_2:37603973-37603992 | Msa0916500:intron | 45.0% | |
| CGAGGAAATCACGAACAAAG+GGG | + | chr6_2:37604023-37604042 | None:intergenic | 45.0% | |
| TCAACATCCAGATCCATCTC+TGG | + | chr6_2:37604140-37604159 | None:intergenic | 45.0% | |
| ! | GTTGATGAAGGTGATGCTAC+TGG | - | chr6_2:37604173-37604192 | Msa0916500:intron | 45.0% |
| AAGTCACCACAAGTTTGGGA+AGG | - | chr6_2:37605261-37605280 | Msa0916500:CDS | 45.0% | |
| AGTCACCACAAGTTTGGGAA+GGG | - | chr6_2:37605262-37605281 | Msa0916500:CDS | 45.0% | |
| GTTTGGGAAGGGTTGTGAAT+TGG | - | chr6_2:37605273-37605292 | Msa0916500:CDS | 45.0% | |
| TGACGATGTTGTCTTGCACA+TGG | - | chr6_2:37605828-37605847 | Msa0916500:CDS | 45.0% | |
| ! | CTTTTTCTTCCGTCACCCAA+GGG | - | chr6_2:37603754-37603773 | Msa0916500:intron | 45.0% |
| CCTCATCTGCTCATCAACTT+TGG | + | chr6_2:37603798-37603817 | None:intergenic | 45.0% | |
| !! | CCAAAGTTGATGAGCAGATG+AGG | - | chr6_2:37603795-37603814 | Msa0916500:intron | 45.0% |
| ! | TGGATTTTGGATGCAGAAGG+GGG | - | chr6_2:37603829-37603848 | Msa0916500:intron | 45.0% |
| ! | TGGAACTGATAACGTGTTGG+TGG | - | chr6_2:37603871-37603890 | Msa0916500:intron | 45.0% |
| ! | GGAACTGATAACGTGTTGGT+GGG | - | chr6_2:37603872-37603891 | Msa0916500:intron | 45.0% |
| CACTCTTGCTAACAATCCTC+AGG | - | chr6_2:37603973-37603992 | Msa0916500:intron | 45.0% | |
| CGAGGAAATCACGAACAAAG+GGG | + | chr6_2:37604023-37604042 | None:intergenic | 45.0% | |
| TCAACATCCAGATCCATCTC+TGG | + | chr6_2:37604140-37604159 | None:intergenic | 45.0% | |
| ! | GTTGATGAAGGTGATGCTAC+TGG | - | chr6_2:37604173-37604192 | Msa0916500:intron | 45.0% |
| AAGTCACCACAAGTTTGGGA+AGG | - | chr6_2:37605261-37605280 | Msa0916500:CDS | 45.0% | |
| AGTCACCACAAGTTTGGGAA+GGG | - | chr6_2:37605262-37605281 | Msa0916500:CDS | 45.0% | |
| GTTTGGGAAGGGTTGTGAAT+TGG | - | chr6_2:37605273-37605292 | Msa0916500:CDS | 45.0% | |
| TGACGATGTTGTCTTGCACA+TGG | - | chr6_2:37605828-37605847 | Msa0916500:CDS | 45.0% | |
| !! | AAATTTAAAGAAAAATAAAA+AGG | + | chr6_2:37604621-37604640 | None:intergenic | 5.0% |
| !! | AAATTTAAAGAAAAATAAAA+AGG | + | chr6_2:37604621-37604640 | None:intergenic | 5.0% |
| GAATTGCTTCCACCTGGTGT+TGG | - | chr6_2:37603587-37603606 | Msa0916500:CDS | 50.0% | |
| !! | GGGTGACGGAAGAAAAAGGA+CGG | + | chr6_2:37603752-37603771 | None:intergenic | 50.0% |
| !! | CCTTGGGTGACGGAAGAAAA+AGG | + | chr6_2:37603756-37603775 | None:intergenic | 50.0% |
| ! | CCTTTTTCTTCCGTCACCCA+AGG | - | chr6_2:37603753-37603772 | Msa0916500:intron | 50.0% |
| GGAAATCACGAACAAAGGGG+AGG | + | chr6_2:37604020-37604039 | None:intergenic | 50.0% | |
| CATCCAGATCCATCTCTGGT+GGG | + | chr6_2:37604136-37604155 | None:intergenic | 50.0% | |
| ACATCCAGATCCATCTCTGG+TGG | + | chr6_2:37604137-37604156 | None:intergenic | 50.0% | |
| GAAGGTGATGCTACTGGAGA+TGG | - | chr6_2:37604179-37604198 | Msa0916500:intron | 50.0% | |
| TCAGAAACCTATGGGGGCTA+GGG | - | chr6_2:37604229-37604248 | Msa0916500:intron | 50.0% | |
| !!! | AGATTTTGAAGGCACCCTGC+AGG | - | chr6_2:37604304-37604323 | Msa0916500:intron | 50.0% |
| CACAACCCTTCCCAAACTTG+TGG | + | chr6_2:37605270-37605289 | None:intergenic | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | - | chr6_2:37605553-37605572 | Msa0916500:CDS | 50.0% | |
| GAATTGCTTCCACCTGGTGT+TGG | - | chr6_2:37603587-37603606 | Msa0916500:CDS | 50.0% | |
| !! | GGGTGACGGAAGAAAAAGGA+CGG | + | chr6_2:37603752-37603771 | None:intergenic | 50.0% |
| !! | CCTTGGGTGACGGAAGAAAA+AGG | + | chr6_2:37603756-37603775 | None:intergenic | 50.0% |
| ! | CCTTTTTCTTCCGTCACCCA+AGG | - | chr6_2:37603753-37603772 | Msa0916500:intron | 50.0% |
| GGAAATCACGAACAAAGGGG+AGG | + | chr6_2:37604020-37604039 | None:intergenic | 50.0% | |
| CATCCAGATCCATCTCTGGT+GGG | + | chr6_2:37604136-37604155 | None:intergenic | 50.0% | |
| ACATCCAGATCCATCTCTGG+TGG | + | chr6_2:37604137-37604156 | None:intergenic | 50.0% | |
| GAAGGTGATGCTACTGGAGA+TGG | - | chr6_2:37604179-37604198 | Msa0916500:intron | 50.0% | |
| TCAGAAACCTATGGGGGCTA+GGG | - | chr6_2:37604229-37604248 | Msa0916500:intron | 50.0% | |
| !!! | AGATTTTGAAGGCACCCTGC+AGG | - | chr6_2:37604304-37604323 | Msa0916500:intron | 50.0% |
| CACAACCCTTCCCAAACTTG+TGG | + | chr6_2:37605270-37605289 | None:intergenic | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | - | chr6_2:37605553-37605572 | Msa0916500:CDS | 50.0% | |
| GAAGGGATGAAGCCAACACC+AGG | + | chr6_2:37603602-37603621 | None:intergenic | 55.0% | |
| GTTTGACTGCCCACCAGAGA+TGG | - | chr6_2:37604124-37604143 | Msa0916500:intron | 55.0% | |
| CTCAGAAACCTATGGGGGCT+AGG | - | chr6_2:37604228-37604247 | Msa0916500:intron | 55.0% | |
| AAACCTATGGGGGCTAGGGA+TGG | - | chr6_2:37604233-37604252 | Msa0916500:intron | 55.0% | |
| AACCTATGGGGGCTAGGGAT+GGG | - | chr6_2:37604234-37604253 | Msa0916500:intron | 55.0% | |
| ! | AGTGCTGCTGTTGAGCAACG+CGG | - | chr6_2:37604266-37604285 | Msa0916500:intron | 55.0% |
| CCGTTGACACCAGGTGTCAA+CGG | + | chr6_2:37605565-37605584 | None:intergenic | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | - | chr6_2:37605562-37605581 | Msa0916500:CDS | 55.0% |
| AGTCAGGATCCGTTGACACC+AGG | + | chr6_2:37605574-37605593 | None:intergenic | 55.0% | |
| GAAGGGATGAAGCCAACACC+AGG | + | chr6_2:37603602-37603621 | None:intergenic | 55.0% | |
| GTTTGACTGCCCACCAGAGA+TGG | - | chr6_2:37604124-37604143 | Msa0916500:intron | 55.0% | |
| CTCAGAAACCTATGGGGGCT+AGG | - | chr6_2:37604228-37604247 | Msa0916500:intron | 55.0% | |
| AAACCTATGGGGGCTAGGGA+TGG | - | chr6_2:37604233-37604252 | Msa0916500:intron | 55.0% | |
| AACCTATGGGGGCTAGGGAT+GGG | - | chr6_2:37604234-37604253 | Msa0916500:intron | 55.0% | |
| ! | AGTGCTGCTGTTGAGCAACG+CGG | - | chr6_2:37604266-37604285 | Msa0916500:intron | 55.0% |
| CCGTTGACACCAGGTGTCAA+CGG | + | chr6_2:37605565-37605584 | None:intergenic | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | - | chr6_2:37605562-37605581 | Msa0916500:CDS | 55.0% |
| AGTCAGGATCCGTTGACACC+AGG | + | chr6_2:37605574-37605593 | None:intergenic | 55.0% | |
| GGGATGAAGCCAACACCAGG+TGG | + | chr6_2:37603599-37603618 | None:intergenic | 60.0% | |
| CTGCCCACCAGAGATGGATC+TGG | - | chr6_2:37604130-37604149 | Msa0916500:intron | 60.0% | |
| ACCTATGGGGGCTAGGGATG+GGG | - | chr6_2:37604235-37604254 | Msa0916500:intron | 60.0% | |
| GGGATGAAGCCAACACCAGG+TGG | + | chr6_2:37603599-37603618 | None:intergenic | 60.0% | |
| CTGCCCACCAGAGATGGATC+TGG | - | chr6_2:37604130-37604149 | Msa0916500:intron | 60.0% | |
| ACCTATGGGGGCTAGGGATG+GGG | - | chr6_2:37604235-37604254 | Msa0916500:intron | 60.0% | |
| GCCCCATCCCTAGCCCCCAT+AGG | + | chr6_2:37604239-37604258 | None:intergenic | 70.0% | |
| ATGGGGGCTAGGGATGGGGC+TGG | - | chr6_2:37604239-37604258 | Msa0916500:intron | 70.0% | |
| GCCCCATCCCTAGCCCCCAT+AGG | + | chr6_2:37604239-37604258 | None:intergenic | 70.0% | |
| ATGGGGGCTAGGGATGGGGC+TGG | - | chr6_2:37604239-37604258 | Msa0916500:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 37603584 | 37605924 | 37603584 | ID=Msa0916500;Name=Msa0916500 |
| chr6_2 | mRNA | 37603584 | 37605924 | 37603584 | ID=Msa0916500-mRNA-1;Parent=Msa0916500;Name=Msa0916500-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.66|1|1|3|0|250 |
| chr6_2 | exon | 37605514 | 37605924 | 37605514 | ID=Msa0916500-mRNA-1:exon:6347;Parent=Msa0916500-mRNA-1 |
| chr6_2 | exon | 37605183 | 37605407 | 37605183 | ID=Msa0916500-mRNA-1:exon:6346;Parent=Msa0916500-mRNA-1 |
| chr6_2 | exon | 37603584 | 37603700 | 37603584 | ID=Msa0916500-mRNA-1:exon:6345;Parent=Msa0916500-mRNA-1 |
| chr6_2 | CDS | 37605514 | 37605924 | 37605514 | ID=Msa0916500-mRNA-1:cds;Parent=Msa0916500-mRNA-1 |
| chr6_2 | CDS | 37605183 | 37605407 | 37605183 | ID=Msa0916500-mRNA-1:cds;Parent=Msa0916500-mRNA-1 |
| chr6_2 | CDS | 37603584 | 37603700 | 37603584 | ID=Msa0916500-mRNA-1:cds;Parent=Msa0916500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
