Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919910 | XP_039021209.1 | 51.020 | 98 | 48 | 0 | 36 | 133 | 36 | 133 | 4.40e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919910 | sp|Q9LSE7|B561C_ARATH | 39.568 | 139 | 78 | 3 | 12 | 148 | 13 | 147 | 2.49e-21 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919910 | MtrunA17_Chr7g0234191 | 39.062 | 128 | 78 | 0 | 6 | 133 | 55 | 182 | 2.07e-22 | 96.7 |
| Msa0919910 | MtrunA17_Chr1g0151541 | 68.421 | 57 | 18 | 0 | 155 | 211 | 827 | 883 | 1.43e-18 | 86.3 |
| Msa0919910 | MtrunA17_Chr1g0191171 | 57.746 | 71 | 21 | 1 | 155 | 225 | 853 | 914 | 4.22e-17 | 82.0 |
| Msa0919910 | MtrunA17_Chr8g0392871 | 56.897 | 58 | 25 | 0 | 155 | 212 | 903 | 960 | 1.60e-15 | 77.0 |
| Msa0919910 | MtrunA17_Chr6g0482711 | 57.895 | 57 | 24 | 0 | 155 | 211 | 824 | 880 | 1.81e-15 | 77.0 |
| Msa0919910 | MtrunA17_Chr2g0294351 | 41.905 | 105 | 52 | 2 | 155 | 250 | 630 | 734 | 2.68e-15 | 76.3 |
| Msa0919910 | MtrunA17_Chr3g0132791 | 43.011 | 93 | 29 | 1 | 155 | 223 | 819 | 911 | 6.44e-15 | 75.5 |
| Msa0919910 | MtrunA17_Chr8g0338731 | 31.884 | 138 | 89 | 2 | 1 | 133 | 1 | 138 | 7.43e-15 | 72.8 |
| Msa0919910 | MtrunA17_Chr5g0427651 | 57.895 | 57 | 24 | 0 | 155 | 211 | 812 | 868 | 7.93e-15 | 75.1 |
| Msa0919910 | MtrunA17_Chr1g0179331 | 51.667 | 60 | 29 | 0 | 155 | 214 | 721 | 780 | 1.18e-14 | 74.3 |
| Msa0919910 | MtrunA17_Chr4g0068411 | 48.810 | 84 | 32 | 2 | 155 | 236 | 624 | 698 | 3.11e-14 | 73.2 |
| Msa0919910 | MtrunA17_Chr5g0397931 | 43.590 | 78 | 35 | 1 | 155 | 232 | 587 | 655 | 1.00e-13 | 71.6 |
| Msa0919910 | MtrunA17_Chr1g0171451 | 39.362 | 94 | 42 | 2 | 155 | 248 | 580 | 658 | 6.69e-13 | 68.9 |
| Msa0919910 | MtrunA17_Chr2g0325851 | 45.763 | 59 | 32 | 0 | 155 | 213 | 721 | 779 | 5.49e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0919910 | AT3G25290.1 | 39.568 | 139 | 78 | 3 | 12 | 148 | 13 | 147 | 2.54e-22 | 96.3 |
| Msa0919910 | AT3G25290.2 | 39.568 | 139 | 78 | 3 | 12 | 148 | 13 | 147 | 2.54e-22 | 96.3 |
| Msa0919910 | AT4G12980.1 | 39.007 | 141 | 78 | 3 | 12 | 148 | 12 | 148 | 1.38e-20 | 91.3 |
| Msa0919910 | AT5G11850.1 | 62.069 | 58 | 22 | 0 | 155 | 212 | 773 | 830 | 3.39e-17 | 82.4 |
| Msa0919910 | AT1G08720.2 | 57.746 | 71 | 21 | 1 | 155 | 225 | 833 | 894 | 1.18e-16 | 80.9 |
| Msa0919910 | AT3G06640.2 | 41.667 | 108 | 54 | 2 | 155 | 253 | 610 | 717 | 1.18e-16 | 80.9 |
| Msa0919910 | AT3G06640.3 | 41.667 | 108 | 54 | 2 | 155 | 253 | 610 | 717 | 1.18e-16 | 80.9 |
| Msa0919910 | AT1G08720.1 | 57.746 | 71 | 21 | 1 | 155 | 225 | 833 | 894 | 1.21e-16 | 80.9 |
| Msa0919910 | AT3G06640.1 | 48.276 | 87 | 34 | 2 | 155 | 239 | 610 | 687 | 1.63e-16 | 80.5 |
| Msa0919910 | AT3G06630.2 | 48.276 | 87 | 34 | 2 | 155 | 239 | 598 | 675 | 3.81e-16 | 79.3 |
| Msa0919910 | AT3G06630.1 | 51.316 | 76 | 28 | 1 | 155 | 230 | 598 | 664 | 4.99e-16 | 79.0 |
| Msa0919910 | AT5G49470.7 | 51.316 | 76 | 28 | 1 | 155 | 230 | 528 | 594 | 6.17e-16 | 78.6 |
| Msa0919910 | AT5G49470.3 | 51.316 | 76 | 28 | 1 | 155 | 230 | 655 | 721 | 6.91e-16 | 78.6 |
| Msa0919910 | AT5G49470.2 | 51.316 | 76 | 28 | 1 | 155 | 230 | 716 | 782 | 7.71e-16 | 78.6 |
| Msa0919910 | AT5G49470.1 | 51.316 | 76 | 28 | 1 | 155 | 230 | 368 | 434 | 8.22e-16 | 77.8 |
| Msa0919910 | AT3G06620.1 | 47.126 | 87 | 35 | 2 | 155 | 239 | 658 | 735 | 8.25e-16 | 78.2 |
| Msa0919910 | AT5G49470.4 | 51.316 | 76 | 28 | 1 | 155 | 230 | 629 | 695 | 9.88e-16 | 78.2 |
| Msa0919910 | AT1G67890.4 | 48.684 | 76 | 30 | 1 | 155 | 230 | 522 | 588 | 2.62e-15 | 76.6 |
| Msa0919910 | AT1G67890.3 | 48.684 | 76 | 30 | 1 | 155 | 230 | 650 | 716 | 3.01e-15 | 76.6 |
| Msa0919910 | AT1G67890.2 | 48.684 | 76 | 30 | 1 | 155 | 230 | 650 | 716 | 3.01e-15 | 76.6 |
| Msa0919910 | AT1G67890.1 | 48.684 | 76 | 30 | 1 | 155 | 230 | 650 | 716 | 3.03e-15 | 76.6 |
| Msa0919910 | AT2G42640.1 | 52.542 | 59 | 28 | 0 | 155 | 213 | 689 | 747 | 5.71e-15 | 75.9 |
| Msa0919910 | AT2G42640.4 | 52.542 | 59 | 28 | 0 | 155 | 213 | 651 | 709 | 5.93e-15 | 75.9 |
| Msa0919910 | AT4G24480.2 | 57.895 | 57 | 24 | 0 | 155 | 211 | 835 | 891 | 1.61e-14 | 74.7 |
| Msa0919910 | AT4G24480.1 | 57.895 | 57 | 24 | 0 | 155 | 211 | 840 | 896 | 1.62e-14 | 74.7 |
| Msa0919910 | AT4G24480.3 | 57.895 | 57 | 24 | 0 | 155 | 211 | 835 | 891 | 1.64e-14 | 74.3 |
| Msa0919910 | AT5G03730.2 | 59.649 | 57 | 23 | 0 | 155 | 211 | 717 | 773 | 1.87e-14 | 74.3 |
| Msa0919910 | AT5G03730.1 | 59.649 | 57 | 23 | 0 | 155 | 211 | 717 | 773 | 1.87e-14 | 74.3 |
| Msa0919910 | AT1G18160.2 | 56.140 | 57 | 25 | 0 | 155 | 211 | 879 | 935 | 2.51e-14 | 73.9 |
| Msa0919910 | AT1G18160.1 | 56.140 | 57 | 25 | 0 | 155 | 211 | 879 | 935 | 2.54e-14 | 73.9 |
| Msa0919910 | AT1G73660.1 | 50.725 | 69 | 33 | 1 | 155 | 223 | 912 | 979 | 4.45e-14 | 73.2 |
| Msa0919910 | AT3G07390.1 | 37.600 | 125 | 63 | 4 | 27 | 148 | 56 | 168 | 1.34e-13 | 70.1 |
| Msa0919910 | AT4G23050.1 | 53.333 | 60 | 28 | 0 | 155 | 214 | 631 | 690 | 1.21e-12 | 68.9 |
| Msa0919910 | AT4G23050.2 | 53.333 | 60 | 28 | 0 | 155 | 214 | 632 | 691 | 1.21e-12 | 68.9 |
| Msa0919910 | AT5G49470.5 | 77.143 | 35 | 8 | 0 | 155 | 189 | 655 | 689 | 1.22e-11 | 65.9 |
| Msa0919910 | AT3G06630.4 | 74.286 | 35 | 9 | 0 | 155 | 189 | 598 | 632 | 1.22e-11 | 65.5 |
| Msa0919910 | AT3G06630.3 | 74.286 | 35 | 9 | 0 | 155 | 189 | 598 | 632 | 1.22e-11 | 65.5 |
| Msa0919910 | AT3G06630.5 | 74.286 | 35 | 9 | 0 | 155 | 189 | 598 | 632 | 1.22e-11 | 65.5 |
| Msa0919910 | AT3G06630.6 | 74.286 | 35 | 9 | 0 | 155 | 189 | 514 | 548 | 1.26e-11 | 65.5 |
| Msa0919910 | AT5G49470.6 | 77.143 | 35 | 8 | 0 | 155 | 189 | 655 | 689 | 1.31e-11 | 65.5 |
| Msa0919910 | AT2G31010.1 | 47.458 | 59 | 31 | 0 | 155 | 213 | 683 | 741 | 1.69e-11 | 65.5 |
| Msa0919910 | AT2G31010.2 | 47.458 | 59 | 31 | 0 | 155 | 213 | 683 | 741 | 1.69e-11 | 65.5 |
| Msa0919910 | AT3G58640.1 | 45.763 | 59 | 32 | 0 | 155 | 213 | 717 | 775 | 9.67e-11 | 63.2 |
| Msa0919910 | AT3G58640.2 | 45.763 | 59 | 32 | 0 | 155 | 213 | 717 | 775 | 9.67e-11 | 63.2 |
Find 73 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCGTTCCTTAAGACTTT+TGG | 0.235872 | 6_2:+53247186 | None:intergenic |
| CTTCTACATTAGGCTCATTC+AGG | 0.265164 | 6_2:-53244793 | Msa0919910:CDS |
| AGCAGAGAAGTGGTGATTTC+AGG | 0.276233 | 6_2:-53246166 | Msa0919910:CDS |
| ATCCCGATGTGAGTTTAATT+TGG | 0.313044 | 6_2:-53246222 | Msa0919910:CDS |
| GCTGTCTTTCCTTCTACATT+AGG | 0.326532 | 6_2:-53244803 | Msa0919910:CDS |
| TAATTTGGCAGCTGCAATTC+CGG | 0.346527 | 6_2:-53246207 | Msa0919910:CDS |
| GAATTCGAAGACGTTTATTT+CGG | 0.347462 | 6_2:+53246965 | None:intergenic |
| CCCAGCCATCAGGCGTTGGC+GGG | 0.357095 | 6_2:+53247847 | None:intergenic |
| CCCACATGCGAAGGCATCTC+GGG | 0.361779 | 6_2:-53247807 | Msa0919910:CDS |
| CAGCGTGGGCAAAGGCAGAT+AGG | 0.364201 | 6_2:+53247935 | None:intergenic |
| AGTGCTGGATTCACTCCATT+TGG | 0.390909 | 6_2:+53246943 | None:intergenic |
| CTGAATGAGCCTAATGTAGA+AGG | 0.393096 | 6_2:+53244794 | None:intergenic |
| TTTGTTAGAGAAAGCAAGTT+CGG | 0.416372 | 6_2:+53246250 | None:intergenic |
| TTGTTAGAGAAAGCAAGTTC+GGG | 0.436718 | 6_2:+53246251 | None:intergenic |
| ACAGTGTGGGTGGGCGTGGA+TGG | 0.441039 | 6_2:-53247211 | Msa0919910:CDS |
| GCCTGATGGCTGGGTCGCGT+GGG | 0.444970 | 6_2:-53247838 | Msa0919910:CDS |
| CCACGCCCACCCACACTGTA+AGG | 0.454061 | 6_2:+53247215 | None:intergenic |
| CCCCACATGCGAAGGCATCT+CGG | 0.458179 | 6_2:-53247808 | Msa0919910:CDS |
| CAGCCATCAGGCGTTGGCGG+GGG | 0.458519 | 6_2:+53247849 | None:intergenic |
| AGGTCCGATGTATATAGTTT+CGG | 0.464320 | 6_2:-53247069 | Msa0919910:CDS |
| TTTGTGGCTCTTAACTGTGA+TGG | 0.466121 | 6_2:-53244896 | Msa0919910:CDS |
| GGATGGCACCAAAAGTCTTA+AGG | 0.472204 | 6_2:-53247194 | Msa0919910:CDS |
| TTGTACATACAACCTGTCTT+CGG | 0.475043 | 6_2:-53248005 | Msa0919910:CDS |
| CCTTACAGTGTGGGTGGGCG+TGG | 0.475810 | 6_2:-53247215 | Msa0919910:CDS |
| TCGGGTCAAGAAGCTTGGTT+AGG | 0.476495 | 6_2:+53246269 | None:intergenic |
| CCCGAGATGCCTTCGCATGT+GGG | 0.480015 | 6_2:+53247807 | None:intergenic |
| TAGTTTCGGTGTGATCTTGT+GGG | 0.485743 | 6_2:-53247055 | Msa0919910:CDS |
| GTCAAAACAACCTGATGAGT+TGG | 0.493976 | 6_2:+53247977 | None:intergenic |
| CCCCACGCGACCCAGCCATC+AGG | 0.501466 | 6_2:+53247837 | None:intergenic |
| AAACGTCTTCGAATTCCAAA+TGG | 0.505722 | 6_2:-53246958 | Msa0919910:CDS |
| TGCCAAATTAAACTCACATC+GGG | 0.509058 | 6_2:+53246220 | None:intergenic |
| ACCCAGCCATCAGGCGTTGG+CGG | 0.511019 | 6_2:+53247846 | None:intergenic |
| CAAGTTCGGGTCAAGAAGCT+TGG | 0.513209 | 6_2:+53246264 | None:intergenic |
| CTGGAATTTAAAAGCTGAAG+AGG | 0.513241 | 6_2:-53247679 | Msa0919910:CDS |
| CGATAGTGAAGGTAATTTCA+AGG | 0.514128 | 6_2:-53244825 | Msa0919910:CDS |
| CACGGTACATACCACACCAT+GGG | 0.520715 | 6_2:+53247013 | None:intergenic |
| TGAAATTACATCTTCTTCGC+CGG | 0.521358 | 6_2:+53246188 | None:intergenic |
| GAAGAGGATGTGGCTAGACC+TGG | 0.525253 | 6_2:-53247663 | Msa0919910:CDS |
| GAGTTGGACAGGCCGAAGAC+AGG | 0.530727 | 6_2:+53247993 | None:intergenic |
| TTTAAAAGCTGAAGAGGATG+TGG | 0.533048 | 6_2:-53247673 | Msa0919910:CDS |
| AACAACCTGATGAGTTGGAC+AGG | 0.535893 | 6_2:+53247982 | None:intergenic |
| ATAGTTTCGGTGTGATCTTG+TGG | 0.538980 | 6_2:-53247056 | Msa0919910:CDS |
| AGCGTGGGCAAAGGCAGATA+GGG | 0.549493 | 6_2:+53247936 | None:intergenic |
| AAAATAGAGAGGATCGTGGT+TGG | 0.559997 | 6_2:+53248041 | None:intergenic |
| GTCAAGTTCAGCGTGGGCAA+AGG | 0.565692 | 6_2:+53247927 | None:intergenic |
| AGAGAGGATCGTGGTTGGCA+AGG | 0.566994 | 6_2:+53248046 | None:intergenic |
| ATATTACCTTTACAACATCC+AGG | 0.568251 | 6_2:+53247645 | None:intergenic |
| CCGAGATGCCTTCGCATGTG+GGG | 0.575665 | 6_2:+53247808 | None:intergenic |
| CCTGATGGCTGGGTCGCGTG+GGG | 0.578815 | 6_2:-53247837 | Msa0919910:CDS |
| GCGACCCAGCCATCAGGCGT+TGG | 0.584039 | 6_2:+53247843 | None:intergenic |
| GCTAGACCTGGATGTTGTAA+AGG | 0.586464 | 6_2:-53247651 | Msa0919910:intron |
| CCACATGCGAAGGCATCTCG+GGG | 0.586802 | 6_2:-53247806 | Msa0919910:CDS |
| ATGTAATTTCAGCAGAGAAG+TGG | 0.587783 | 6_2:-53246176 | Msa0919910:CDS |
| TCTTAACTGTGATGGAGTTG+TGG | 0.593672 | 6_2:-53244888 | Msa0919910:CDS |
| CTGCCAAATTAAACTCACAT+CGG | 0.600014 | 6_2:+53246219 | None:intergenic |
| CATAGTTGATAAACTGCTCA+CGG | 0.606027 | 6_2:+53246995 | None:intergenic |
| ACCACACCATGGGGTTCGTG+TGG | 0.608054 | 6_2:+53247023 | None:intergenic |
| GGTATAAACCCCACATGCGA+AGG | 0.611448 | 6_2:-53247816 | Msa0919910:CDS |
| ACCACACGAACCCCATGGTG+TGG | 0.623116 | 6_2:-53247024 | Msa0919910:CDS |
| GGAGTTGTGGCAATCGACAA+AGG | 0.625648 | 6_2:-53244875 | Msa0919910:CDS |
| CATAGCGTCAAGTTCAGCGT+GGG | 0.630430 | 6_2:+53247921 | None:intergenic |
| TTCCAGACCTCAAAAGACAA+TGG | 0.638641 | 6_2:+53247696 | None:intergenic |
| TCACGGTACATACCACACCA+TGG | 0.644138 | 6_2:+53247012 | None:intergenic |
| AGAGAAGTGGTGATTTCAGG+AGG | 0.648310 | 6_2:-53246163 | Msa0919910:intron |
| TAACTACCACACGAACCCCA+TGG | 0.668291 | 6_2:-53247029 | Msa0919910:CDS |
| GCGCTTGGAAAAGTAGAGAG+AGG | 0.670803 | 6_2:+53247871 | None:intergenic |
| GGTGTCATATGCGATAGTGA+AGG | 0.674798 | 6_2:-53244836 | Msa0919910:CDS |
| CACACCGAAACTATATACAT+CGG | 0.676684 | 6_2:+53247065 | None:intergenic |
| AAAGGAGTTGCTGACTGCGG+TGG | 0.683265 | 6_2:-53244857 | Msa0919910:CDS |
| ACATAGCGTCAAGTTCAGCG+TGG | 0.695271 | 6_2:+53247920 | None:intergenic |
| GACAAAGGAGTTGCTGACTG+CGG | 0.699879 | 6_2:-53244860 | Msa0919910:CDS |
| CACATGCGAAGGCATCTCGG+GGG | 0.708933 | 6_2:-53247805 | Msa0919910:CDS |
| ACGGTACATACCACACCATG+GGG | 0.725550 | 6_2:+53247014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACTAATATATATATTTC+AGG | + | chr6_2:53247462-53247481 | None:intergenic | 10.0% |
| !!! | TTGATATTACTTTTATTTTC+AGG | + | chr6_2:53245263-53245282 | None:intergenic | 15.0% |
| !!! | TATCATTTGAACTTTTTATT+GGG | - | chr6_2:53245484-53245503 | Msa0919910:intron | 15.0% |
| !!! | TTTTTTTTTAAACTTTTTCG+TGG | - | chr6_2:53245512-53245531 | Msa0919910:intron | 15.0% |
| !! | TATACTTACAAAACAAATTT+AGG | - | chr6_2:53245585-53245604 | Msa0919910:intron | 15.0% |
| !!! | AGTTTAAAACTCTAATTTAT+TGG | - | chr6_2:53246327-53246346 | Msa0919910:intron | 15.0% |
| !! | ATTATTGTTTAAGTATCTTA+TGG | - | chr6_2:53246369-53246388 | Msa0919910:intron | 15.0% |
| !! | AAAAAAAATGACAGTATAAA+TGG | - | chr6_2:53246738-53246757 | Msa0919910:intron | 15.0% |
| !! | TAAAGTAATAGAATTATGAT+AGG | - | chr6_2:53246774-53246793 | Msa0919910:intron | 15.0% |
| !!! | TATATACAAAGGTATTTTAT+AGG | - | chr6_2:53247079-53247098 | Msa0919910:intron | 15.0% |
| !!! | ATTGTTAGAATTTAAAACTT+CGG | + | chr6_2:53247396-53247415 | None:intergenic | 15.0% |
| !!! | GTATCATTTGAACTTTTTAT+TGG | - | chr6_2:53245483-53245502 | Msa0919910:intron | 20.0% |
| !!! | TTAATTATTTAAGTTAGTGC+TGG | + | chr6_2:53245915-53245934 | None:intergenic | 20.0% |
| !! | AGCACTAACTTAAATAATTA+AGG | - | chr6_2:53245914-53245933 | Msa0919910:intron | 20.0% |
| !! | GAAAATAAATCCACATTATA+AGG | - | chr6_2:53246079-53246098 | Msa0919910:intron | 20.0% |
| !! | TATTGTAATAAGTTATTCCT+TGG | - | chr6_2:53246286-53246305 | Msa0919910:CDS | 20.0% |
| !! | TAGTATTATTATATGCATTG+AGG | - | chr6_2:53247475-53247494 | Msa0919910:intron | 20.0% |
| !!! | ATTTTGTACAAAATAACGAT+TGG | + | chr6_2:53247583-53247602 | None:intergenic | 20.0% |
| !!! | TCCTCTCTATTTTTATACTA+TGG | - | chr6_2:53244809-53244828 | Msa0919910:CDS | 25.0% |
| !!! | GTTGTTTTGACCAAATAAAA+GGG | - | chr6_2:53244875-53244894 | Msa0919910:CDS | 25.0% |
| !!! | ATTCCTTGCTTCTTTTAAAA+TGG | - | chr6_2:53245062-53245081 | Msa0919910:intron | 25.0% |
| !!! | TATCCATTTTAAAAGAAGCA+AGG | + | chr6_2:53245068-53245087 | None:intergenic | 25.0% |
| !!! | TTTTTTAAACTTTTTCGTGG+AGG | - | chr6_2:53245515-53245534 | Msa0919910:intron | 25.0% |
| !! | GTTTTGTAAGTATATCTACA+AGG | + | chr6_2:53245579-53245598 | None:intergenic | 25.0% |
| ! | CTTAAATAATTAAGGATTGC+TGG | - | chr6_2:53245922-53245941 | Msa0919910:intron | 25.0% |
| ! | TAACAATCAGAAAACGTAAA+TGG | + | chr6_2:53245969-53245988 | None:intergenic | 25.0% |
| ! | CACATTCTAATGTAATGAAA+GGG | + | chr6_2:53246032-53246051 | None:intergenic | 25.0% |
| ! | CTTTCATTACATTAGAATGT+GGG | - | chr6_2:53246031-53246050 | Msa0919910:intron | 25.0% |
| !!! | TTATGTTGTTTTTTGATGCA+GGG | - | chr6_2:53246160-53246179 | Msa0919910:intron | 25.0% |
| ! | TTATTACAATAGCAATGTCA+TGG | + | chr6_2:53246277-53246296 | None:intergenic | 25.0% |
| ! | CTTAGACTACTTATATACAA+AGG | - | chr6_2:53247068-53247087 | Msa0919910:CDS | 25.0% |
| ! | TGTTGACATCAATATGTATA+TGG | - | chr6_2:53247149-53247168 | Msa0919910:intron | 25.0% |
| ! | GAAATAGAAACAATCAAACA+TGG | - | chr6_2:53247328-53247347 | Msa0919910:intron | 25.0% |
| ! | CTTCTTATGTTGAATAGAAT+CGG | + | chr6_2:53247724-53247743 | None:intergenic | 25.0% |
| ! | AGAATACTAGAATATGAACT+TGG | - | chr6_2:53247850-53247869 | Msa0919910:CDS | 25.0% |
| TATAAAAATAGAGAGGATCG+TGG | + | chr6_2:53244806-53244825 | None:intergenic | 30.0% | |
| GCCATAGTATAAAAATAGAG+AGG | + | chr6_2:53244813-53244832 | None:intergenic | 30.0% | |
| !!! | GGTTGTTTTGACCAAATAAA+AGG | - | chr6_2:53244874-53244893 | Msa0919910:CDS | 30.0% |
| ATATTACCTTTACAACATCC+AGG | + | chr6_2:53245198-53245217 | None:intergenic | 30.0% | |
| ATATCAAATCAATTGAGTGC+TGG | - | chr6_2:53245276-53245295 | Msa0919910:intron | 30.0% | |
| TCTACATTTATTTCCACTTC+TGG | - | chr6_2:53245329-53245348 | Msa0919910:intron | 30.0% | |
| AGAAGTTAACGAAAGAAAAG+TGG | - | chr6_2:53245352-53245371 | Msa0919910:intron | 30.0% | |
| !! | ATTGAGGAAGTATTTGTAAG+TGG | - | chr6_2:53245553-53245572 | Msa0919910:intron | 30.0% |
| ! | GTATATTTTCCTTACAGTGT+GGG | - | chr6_2:53245616-53245635 | Msa0919910:intron | 30.0% |
| AAAGCCAGATATAAGAGTTT+AGG | - | chr6_2:53245721-53245740 | Msa0919910:intron | 30.0% | |
| ACATCCTAAACTCTTATATC+TGG | + | chr6_2:53245728-53245747 | None:intergenic | 30.0% | |
| GAATTCGAAGACGTTTATTT+CGG | + | chr6_2:53245878-53245897 | None:intergenic | 30.0% | |
| ! | TTAGAATCTAGAACTGTGTA+TGG | - | chr6_2:53245991-53246010 | Msa0919910:intron | 30.0% |
| TAATGAAAGGGTAACAAACA+TGG | + | chr6_2:53246020-53246039 | None:intergenic | 30.0% | |
| CCACATTCTAATGTAATGAA+AGG | + | chr6_2:53246033-53246052 | None:intergenic | 30.0% | |
| CCTTTCATTACATTAGAATG+TGG | - | chr6_2:53246030-53246049 | Msa0919910:intron | 30.0% | |
| TGGAAATCTTCCTTATAATG+TGG | + | chr6_2:53246092-53246111 | None:intergenic | 30.0% | |
| !!! | GTTATGTTGTTTTTTGATGC+AGG | - | chr6_2:53246159-53246178 | Msa0919910:intron | 30.0% |
| GATTTGTCATCTTAGTCAAT+TGG | - | chr6_2:53246214-53246233 | Msa0919910:CDS | 30.0% | |
| !! | AATTGGTTTGCCTGTAAAAT+GGG | - | chr6_2:53246231-53246250 | Msa0919910:CDS | 30.0% |
| TTTGTTAGAGAAAGCAAGTT+CGG | + | chr6_2:53246593-53246612 | None:intergenic | 30.0% | |
| TACAACCTCTGATTATGTTA+AGG | + | chr6_2:53246869-53246888 | None:intergenic | 30.0% | |
| ! | AAAAAACGACATGCTTTTCA+TGG | - | chr6_2:53246912-53246931 | Msa0919910:intron | 30.0% |
| ! | AAAAACGACATGCTTTTCAT+GGG | - | chr6_2:53246913-53246932 | Msa0919910:intron | 30.0% |
| !! | CATGTCAATGTTTTTAATGC+AGG | - | chr6_2:53247042-53247061 | Msa0919910:CDS | 30.0% |
| AAGCACCATTTATGTAATGT+AGG | - | chr6_2:53247124-53247143 | Msa0919910:intron | 30.0% | |
| ACAGTCCTACATTACATAAA+TGG | + | chr6_2:53247132-53247151 | None:intergenic | 30.0% | |
| TTGTGATTGGATTGATTGAA+TGG | + | chr6_2:53247194-53247213 | None:intergenic | 30.0% | |
| ATTCAATCAATCCAATCACA+AGG | - | chr6_2:53247193-53247212 | Msa0919910:CDS | 30.0% | |
| CAATTACTGTTTGGAAGATT+TGG | + | chr6_2:53247238-53247257 | None:intergenic | 30.0% | |
| CAAATCTTCCAAACAGTAAT+TGG | - | chr6_2:53247236-53247255 | Msa0919910:CDS | 30.0% | |
| TTCCAAACAGTAATTGGTAA+AGG | - | chr6_2:53247242-53247261 | Msa0919910:intron | 30.0% | |
| TTCCTTTACCAATTACTGTT+TGG | + | chr6_2:53247247-53247266 | None:intergenic | 30.0% | |
| ! | GTTTGATTCGTTTGAGTAAT+TGG | + | chr6_2:53247287-53247306 | None:intergenic | 30.0% |
| AAACTTCGGATTGTTAGAAT+GGG | + | chr6_2:53247382-53247401 | None:intergenic | 30.0% | |
| AAAACTTCGGATTGTTAGAA+TGG | + | chr6_2:53247383-53247402 | None:intergenic | 30.0% | |
| ! | AGTGCAACATTTTGTGTAAT+TGG | + | chr6_2:53247431-53247450 | None:intergenic | 30.0% |
| ! | TTTGGTGCGAAATTATTTAG+AGG | - | chr6_2:53247635-53247654 | Msa0919910:intron | 30.0% |
| TGGACTATAGAAATACTAGA+AGG | - | chr6_2:53247870-53247889 | Msa0919910:CDS | 30.0% | |
| TTGATAGACCTCTAATTAAC+AGG | - | chr6_2:53247920-53247939 | Msa0919910:CDS | 30.0% | |
| TTGTACATACAACCTGTCTT+CGG | - | chr6_2:53244835-53244854 | Msa0919910:CDS | 35.0% | |
| CTGGAATTTAAAAGCTGAAG+AGG | - | chr6_2:53245161-53245180 | Msa0919910:intron | 35.0% | |
| TTTAAAAGCTGAAGAGGATG+TGG | - | chr6_2:53245167-53245186 | Msa0919910:intron | 35.0% | |
| ATACTTGACTTCTTTGTCTG+CGG | - | chr6_2:53245220-53245239 | Msa0919910:intron | 35.0% | |
| CTGGACGAGAGAAATAAAAT+TGG | - | chr6_2:53245295-53245314 | Msa0919910:intron | 35.0% | |
| CAGCTCTATCACTACTTTAT+TGG | + | chr6_2:53245464-53245483 | None:intergenic | 35.0% | |
| GTTGTGGGAATAGATTATTG+AGG | - | chr6_2:53245537-53245556 | Msa0919910:intron | 35.0% | |
| ! | CGTATATTTTCCTTACAGTG+TGG | - | chr6_2:53245615-53245634 | Msa0919910:intron | 35.0% |
| ATTTACAGTTTGCATGATGC+AGG | - | chr6_2:53245751-53245770 | Msa0919910:intron | 35.0% | |
| AGGTCCGATGTATATAGTTT+CGG | - | chr6_2:53245771-53245790 | Msa0919910:intron | 35.0% | |
| CACACCGAAACTATATACAT+CGG | + | chr6_2:53245778-53245797 | None:intergenic | 35.0% | |
| !! | CATAGTTGATAAACTGCTCA+CGG | + | chr6_2:53245848-53245867 | None:intergenic | 35.0% |
| AAACGTCTTCGAATTCCAAA+TGG | - | chr6_2:53245882-53245901 | Msa0919910:intron | 35.0% | |
| AGCACTACTCATTAAACTAG+TGG | + | chr6_2:53246112-53246131 | None:intergenic | 35.0% | |
| ATGACAAATCAGATCTGAGA+AGG | + | chr6_2:53246204-53246223 | None:intergenic | 35.0% | |
| !! | CAATTGGTTTGCCTGTAAAA+TGG | - | chr6_2:53246230-53246249 | Msa0919910:CDS | 35.0% |
| ! | ATGTGTAAAGCCCATTTTAC+AGG | + | chr6_2:53246244-53246263 | None:intergenic | 35.0% |
| TTGTTAGAGAAAGCAAGTTC+GGG | + | chr6_2:53246592-53246611 | None:intergenic | 35.0% | |
| ATCCCGATGTGAGTTTAATT+TGG | - | chr6_2:53246618-53246637 | Msa0919910:intron | 35.0% | |
| TGCCAAATTAAACTCACATC+GGG | + | chr6_2:53246623-53246642 | None:intergenic | 35.0% | |
| CTGCCAAATTAAACTCACAT+CGG | + | chr6_2:53246624-53246643 | None:intergenic | 35.0% | |
| TGAAATTACATCTTCTTCGC+CGG | + | chr6_2:53246655-53246674 | None:intergenic | 35.0% | |
| ATGTAATTTCAGCAGAGAAG+TGG | - | chr6_2:53246664-53246683 | Msa0919910:intron | 35.0% | |
| ! | TTCTGGAAGTTTACTACACT+TGG | + | chr6_2:53246846-53246865 | None:intergenic | 35.0% |
| CTCTGATTATGTTAAGGTTC+TGG | + | chr6_2:53246863-53246882 | None:intergenic | 35.0% | |
| CAGAACCTTAACATAATCAG+AGG | - | chr6_2:53246861-53246880 | Msa0919910:intron | 35.0% | |
| !!! | GAAAAGCATGTCGTTTTTTC+TGG | + | chr6_2:53246911-53246930 | None:intergenic | 35.0% |
| !!! | TAGAACACGGTTTTAAATGC+AGG | - | chr6_2:53246951-53246970 | Msa0919910:intron | 35.0% |
| !! | GGAAGATTTGGTAGATTTTC+CGG | + | chr6_2:53247226-53247245 | None:intergenic | 35.0% |
| TAGAAACAATCAAACATGGC+AGG | - | chr6_2:53247332-53247351 | Msa0919910:intron | 35.0% | |
| ATTGTTAGAATGGGAAGAGT+GGG | + | chr6_2:53247373-53247392 | None:intergenic | 35.0% | |
| AATTAAAACTCGCAGCGATA+AGG | - | chr6_2:53247510-53247529 | Msa0919910:intron | 35.0% | |
| ATTAAAACTCGCAGCGATAA+GGG | - | chr6_2:53247511-53247530 | Msa0919910:intron | 35.0% | |
| TTATACATCTCGCAGTGATA+AGG | - | chr6_2:53247604-53247623 | Msa0919910:intron | 35.0% | |
| TATACATCTCGCAGTGATAA+GGG | - | chr6_2:53247605-53247624 | Msa0919910:intron | 35.0% | |
| AGTGATAAGGGATCGTTATT+TGG | - | chr6_2:53247617-53247636 | Msa0919910:intron | 35.0% | |
| AAACAAGCAACTGAGTAGTT+AGG | + | chr6_2:53247678-53247697 | None:intergenic | 35.0% | |
| CCACAAAACCTGTTAATTAG+AGG | + | chr6_2:53247931-53247950 | None:intergenic | 35.0% | |
| ! | CCTCTAATTAACAGGTTTTG+TGG | - | chr6_2:53247928-53247947 | Msa0919910:CDS | 35.0% |
| CGATAGTGAAGGTAATTTCA+AGG | - | chr6_2:53248015-53248034 | Msa0919910:CDS | 35.0% | |
| AAAATAGAGAGGATCGTGGT+TGG | + | chr6_2:53244802-53244821 | None:intergenic | 40.0% | |
| GTCAAAACAACCTGATGAGT+TGG | + | chr6_2:53244866-53244885 | None:intergenic | 40.0% | |
| ! | TCTTCGACCATTGTCTTTTG+AGG | - | chr6_2:53245137-53245156 | Msa0919910:intron | 40.0% |
| TTCCAGACCTCAAAAGACAA+TGG | + | chr6_2:53245147-53245166 | None:intergenic | 40.0% | |
| TTCGTTAACTTCTCCAGAAG+TGG | + | chr6_2:53245345-53245364 | None:intergenic | 40.0% | |
| !!! | AAACTTTTTCGTGGAGGTTG+TGG | - | chr6_2:53245521-53245540 | Msa0919910:intron | 40.0% |
| !!! | AACTTTTTCGTGGAGGTTGT+GGG | - | chr6_2:53245522-53245541 | Msa0919910:intron | 40.0% |
| ! | TATTTTCCTTACAGTGTGGG+TGG | - | chr6_2:53245619-53245638 | Msa0919910:intron | 40.0% |
| ! | ATTTTCCTTACAGTGTGGGT+GGG | - | chr6_2:53245620-53245639 | Msa0919910:intron | 40.0% |
| ! | CTCTCGTTCCTTAAGACTTT+TGG | + | chr6_2:53245657-53245676 | None:intergenic | 40.0% |
| TTCTCTATGTGTATGCCTCA+TGG | - | chr6_2:53245698-53245717 | Msa0919910:intron | 40.0% | |
| !! | CTTATATCTGGCTTTCCATG+AGG | + | chr6_2:53245716-53245735 | None:intergenic | 40.0% |
| ! | ATAGTTTCGGTGTGATCTTG+TGG | - | chr6_2:53245784-53245803 | Msa0919910:intron | 40.0% |
| ! | TAGTTTCGGTGTGATCTTGT+GGG | - | chr6_2:53245785-53245804 | Msa0919910:intron | 40.0% |
| CAAATCAGATCTGAGAAGGA+TGG | + | chr6_2:53246200-53246219 | None:intergenic | 40.0% | |
| AAGTTGAGCACTTTGAACCA+AGG | + | chr6_2:53246306-53246325 | None:intergenic | 40.0% | |
| TCTGATAACCTTAGAGAGTC+AGG | + | chr6_2:53246499-53246518 | None:intergenic | 40.0% | |
| GGTTATCAGATCCATTTCCA+TGG | - | chr6_2:53246509-53246528 | Msa0919910:intron | 40.0% | |
| TATCAGATCCATTTCCATGG+TGG | - | chr6_2:53246512-53246531 | Msa0919910:intron | 40.0% | |
| CAATGACAAACTGTCACGAT+AGG | + | chr6_2:53246547-53246566 | None:intergenic | 40.0% | |
| TAATTTGGCAGCTGCAATTC+CGG | - | chr6_2:53246633-53246652 | Msa0919910:intron | 40.0% | |
| TTAAAACCGTGTTCTACGCT+GGG | + | chr6_2:53246947-53246966 | None:intergenic | 40.0% | |
| ! | TTTAAAACCGTGTTCTACGC+TGG | + | chr6_2:53246948-53246967 | None:intergenic | 40.0% |
| AATCCAATCGCATCAGACAT+TGG | - | chr6_2:53247010-53247029 | Msa0919910:CDS | 40.0% | |
| !! | AGATTTGGTAGATTTTCCGG+TGG | + | chr6_2:53247223-53247242 | None:intergenic | 40.0% |
| GATTGTTAGAATGGGAAGAG+TGG | + | chr6_2:53247374-53247393 | None:intergenic | 40.0% | |
| ! | TGTGTAATTGGTCTCAGAAG+TGG | + | chr6_2:53247419-53247438 | None:intergenic | 40.0% |
| TTAAAACTCGCAGCGATAAG+GGG | - | chr6_2:53247512-53247531 | Msa0919910:intron | 40.0% | |
| TTTGTGGCTCTTAACTGTGA+TGG | - | chr6_2:53247944-53247963 | Msa0919910:CDS | 40.0% | |
| ! | TCTTAACTGTGATGGAGTTG+TGG | - | chr6_2:53247952-53247971 | Msa0919910:CDS | 40.0% |
| GCTGTCTTTCCTTCTACATT+AGG | - | chr6_2:53248037-53248056 | Msa0919910:CDS | 40.0% | |
| CTGAATGAGCCTAATGTAGA+AGG | + | chr6_2:53248049-53248068 | None:intergenic | 40.0% | |
| CTTCTACATTAGGCTCATTC+AGG | - | chr6_2:53248047-53248066 | Msa0919910:CDS | 40.0% | |
| ! | AACAACCTGATGAGTTGGAC+AGG | + | chr6_2:53244861-53244880 | None:intergenic | 45.0% |
| !! | AGGGAGCGTACCCTTTTATT+TGG | + | chr6_2:53244888-53244907 | None:intergenic | 45.0% |
| !!! | GACCATTGTCTTTTGAGGTC+TGG | - | chr6_2:53245142-53245161 | Msa0919910:intron | 45.0% |
| GCTAGACCTGGATGTTGTAA+AGG | - | chr6_2:53245189-53245208 | Msa0919910:intron | 45.0% | |
| GGATGGCACCAAAAGTCTTA+AGG | - | chr6_2:53245646-53245665 | Msa0919910:intron | 45.0% | |
| ! | AGTGCTGGATTCACTCCATT+TGG | + | chr6_2:53245900-53245919 | None:intergenic | 45.0% |
| GTTTCACACCTGACTCTCTA+AGG | - | chr6_2:53246488-53246507 | Msa0919910:intron | 45.0% | |
| GACAAACTGTCACGATAGGA+TGG | + | chr6_2:53246543-53246562 | None:intergenic | 45.0% | |
| AGCAGAGAAGTGGTGATTTC+AGG | - | chr6_2:53246674-53246693 | Msa0919910:intron | 45.0% | |
| AGAGAAGTGGTGATTTCAGG+AGG | - | chr6_2:53246677-53246696 | Msa0919910:intron | 45.0% | |
| TAACCATAGCACCATCGATG+TGG | - | chr6_2:53246974-53246993 | Msa0919910:CDS | 45.0% | |
| AACCATAGCACCATCGATGT+GGG | - | chr6_2:53246975-53246994 | Msa0919910:CDS | 45.0% | |
| ATGCCAATGTCTGATGCGAT+TGG | + | chr6_2:53247016-53247035 | None:intergenic | 45.0% | |
| TAAAACTCGCAGCGATAAGG+GGG | - | chr6_2:53247513-53247532 | Msa0919910:intron | 45.0% | |
| AGAAAACCTGCTTGTGTCTC+TGG | - | chr6_2:53247896-53247915 | Msa0919910:CDS | 45.0% | |
| ! | GGTGTCATATGCGATAGTGA+AGG | - | chr6_2:53248004-53248023 | Msa0919910:CDS | 45.0% |
| CATAGCGTCAAGTTCAGCGT+GGG | + | chr6_2:53244922-53244941 | None:intergenic | 50.0% | |
| ACATAGCGTCAAGTTCAGCG+TGG | + | chr6_2:53244923-53244942 | None:intergenic | 50.0% | |
| GCGCTTGGAAAAGTAGAGAG+AGG | + | chr6_2:53244972-53244991 | None:intergenic | 50.0% | |
| GGTATAAACCCCACATGCGA+AGG | - | chr6_2:53245024-53245043 | Msa0919910:intron | 50.0% | |
| TAACTACCACACGAACCCCA+TGG | - | chr6_2:53245811-53245830 | Msa0919910:intron | 50.0% | |
| ACGGTACATACCACACCATG+GGG | + | chr6_2:53245829-53245848 | None:intergenic | 50.0% | |
| CACGGTACATACCACACCAT+GGG | + | chr6_2:53245830-53245849 | None:intergenic | 50.0% | |
| TCACGGTACATACCACACCA+TGG | + | chr6_2:53245831-53245850 | None:intergenic | 50.0% | |
| CAGATCCATTTCCATGGTGG+TGG | - | chr6_2:53246515-53246534 | Msa0919910:intron | 50.0% | |
| TGGATCCACCACCATGGAAA+TGG | + | chr6_2:53246523-53246542 | None:intergenic | 50.0% | |
| ATAGGATGGATCCACCACCA+TGG | + | chr6_2:53246529-53246548 | None:intergenic | 50.0% | |
| TCGGGTCAAGAAGCTTGGTT+AGG | + | chr6_2:53246574-53246593 | None:intergenic | 50.0% | |
| CAAGTTCGGGTCAAGAAGCT+TGG | + | chr6_2:53246579-53246598 | None:intergenic | 50.0% | |
| CAGGAGGTAAAGCTGCGATT+TGG | - | chr6_2:53246693-53246712 | Msa0919910:intron | 50.0% | |
| TGTCAACAGTCCCACATCGA+TGG | + | chr6_2:53246988-53247007 | None:intergenic | 50.0% | |
| GAAGAGTGGGAAGATCTAGC+AGG | + | chr6_2:53247360-53247379 | None:intergenic | 50.0% | |
| !! | AGCGATAAGGGGGCGTTATT+CGG | - | chr6_2:53247523-53247542 | Msa0919910:intron | 50.0% |
| ATCAAGCCAGAGACACAAGC+AGG | + | chr6_2:53247905-53247924 | None:intergenic | 50.0% | |
| GGAGTTGTGGCAATCGACAA+AGG | - | chr6_2:53247965-53247984 | Msa0919910:CDS | 50.0% | |
| ! | GACAAAGGAGTTGCTGACTG+CGG | - | chr6_2:53247980-53247999 | Msa0919910:CDS | 50.0% |
| AGAGAGGATCGTGGTTGGCA+AGG | + | chr6_2:53244797-53244816 | None:intergenic | 55.0% | |
| TTCGGCCTGTCCAACTCATC+AGG | - | chr6_2:53244853-53244872 | Msa0919910:CDS | 55.0% | |
| AGCGTGGGCAAAGGCAGATA+GGG | + | chr6_2:53244907-53244926 | None:intergenic | 55.0% | |
| GTCAAGTTCAGCGTGGGCAA+AGG | + | chr6_2:53244916-53244935 | None:intergenic | 55.0% | |
| GAAGAGGATGTGGCTAGACC+TGG | - | chr6_2:53245177-53245196 | Msa0919910:intron | 55.0% | |
| ACCCTTCCCAGCGTAGAACA+CGG | - | chr6_2:53246938-53246957 | Msa0919910:intron | 55.0% | |
| ACCGTGTTCTACGCTGGGAA+GGG | + | chr6_2:53246942-53246961 | None:intergenic | 55.0% | |
| AACCGTGTTCTACGCTGGGA+AGG | + | chr6_2:53246943-53246962 | None:intergenic | 55.0% | |
| ! | GTCCCACATCGATGGTGCTA+TGG | + | chr6_2:53246980-53246999 | None:intergenic | 55.0% |
| CCAATCACAAGGCTCACCAC+CGG | - | chr6_2:53247204-53247223 | Msa0919910:CDS | 55.0% | |
| ! | AAAGGAGTTGCTGACTGCGG+TGG | - | chr6_2:53247983-53248002 | Msa0919910:CDS | 55.0% |
| GAGTTGGACAGGCCGAAGAC+AGG | + | chr6_2:53244850-53244869 | None:intergenic | 60.0% | |
| CAGCGTGGGCAAAGGCAGAT+AGG | + | chr6_2:53244908-53244927 | None:intergenic | 60.0% | |
| CCGAGATGCCTTCGCATGTG+GGG | + | chr6_2:53245035-53245054 | None:intergenic | 60.0% | |
| !! | CCCCACATGCGAAGGCATCT+CGG | - | chr6_2:53245032-53245051 | Msa0919910:intron | 60.0% |
| CCCGAGATGCCTTCGCATGT+GGG | + | chr6_2:53245036-53245055 | None:intergenic | 60.0% | |
| !! | CCCACATGCGAAGGCATCTC+GGG | - | chr6_2:53245033-53245052 | Msa0919910:intron | 60.0% |
| !! | CCACATGCGAAGGCATCTCG+GGG | - | chr6_2:53245034-53245053 | Msa0919910:intron | 60.0% |
| !! | CACATGCGAAGGCATCTCGG+GGG | - | chr6_2:53245035-53245054 | Msa0919910:intron | 60.0% |
| ACCACACGAACCCCATGGTG+TGG | - | chr6_2:53245816-53245835 | Msa0919910:intron | 60.0% | |
| ACCACACCATGGGGTTCGTG+TGG | + | chr6_2:53245820-53245839 | None:intergenic | 60.0% | |
| GAGAAGGATGGACGCGTGTG+TGG | + | chr6_2:53246188-53246207 | None:intergenic | 60.0% | |
| ! | CCGGTGGTGAGCCTTGTGAT+TGG | + | chr6_2:53247207-53247226 | None:intergenic | 60.0% |
| !! | ACCCAGCCATCAGGCGTTGG+CGG | + | chr6_2:53244997-53245016 | None:intergenic | 65.0% |
| CCCCGAGATGCCTTCGCATG+TGG | + | chr6_2:53245037-53245056 | None:intergenic | 65.0% | |
| CCACGCCCACCCACACTGTA+AGG | + | chr6_2:53245628-53245647 | None:intergenic | 65.0% | |
| CCTTACAGTGTGGGTGGGCG+TGG | - | chr6_2:53245625-53245644 | Msa0919910:intron | 65.0% | |
| ACAGTGTGGGTGGGCGTGGA+TGG | - | chr6_2:53245629-53245648 | Msa0919910:intron | 65.0% | |
| !! | CAGCCATCAGGCGTTGGCGG+GGG | + | chr6_2:53244994-53245013 | None:intergenic | 70.0% |
| !! | CCAGCCATCAGGCGTTGGCG+GGG | + | chr6_2:53244995-53245014 | None:intergenic | 70.0% |
| !! | CCCAGCCATCAGGCGTTGGC+GGG | + | chr6_2:53244996-53245015 | None:intergenic | 70.0% |
| CCCGCCAACGCCTGATGGCT+GGG | - | chr6_2:53244993-53245012 | Msa0919910:intron | 70.0% | |
| GCGACCCAGCCATCAGGCGT+TGG | + | chr6_2:53245000-53245019 | None:intergenic | 70.0% | |
| GCCTGATGGCTGGGTCGCGT+GGG | - | chr6_2:53245002-53245021 | Msa0919910:intron | 70.0% | |
| CCTGATGGCTGGGTCGCGTG+GGG | - | chr6_2:53245003-53245022 | Msa0919910:intron | 70.0% | |
| CCCCGCCAACGCCTGATGGC+TGG | - | chr6_2:53244992-53245011 | Msa0919910:intron | 75.0% | |
| CGCCTGATGGCTGGGTCGCG+TGG | - | chr6_2:53245001-53245020 | Msa0919910:intron | 75.0% | |
| CCCCACGCGACCCAGCCATC+AGG | + | chr6_2:53245006-53245025 | None:intergenic | 75.0% | |
| !!! | CAGGCGTTGGCGGGGGCGCT+TGG | + | chr6_2:53244987-53245006 | None:intergenic | 80.0% |
| ! | GCGCCCCCGCCAACGCCTGA+TGG | - | chr6_2:53244988-53245007 | Msa0919910:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53244787 | 53248075 | 53244787 | ID=Msa0919910;Name=Msa0919910 |
| chr6_2 | mRNA | 53244787 | 53248075 | 53244787 | ID=Msa0919910-mRNA-1;Parent=Msa0919910;Name=Msa0919910-mRNA-1;_AED=0.50;_eAED=0.51;_QI=0|0|0|0.4|1|1|5|0|304 |
| chr6_2 | exon | 53247652 | 53248075 | 53247652 | ID=Msa0919910-mRNA-1:exon:7956;Parent=Msa0919910-mRNA-1 |
| chr6_2 | exon | 53247174 | 53247255 | 53247174 | ID=Msa0919910-mRNA-1:exon:7955;Parent=Msa0919910-mRNA-1 |
| chr6_2 | exon | 53246957 | 53247089 | 53246957 | ID=Msa0919910-mRNA-1:exon:7954;Parent=Msa0919910-mRNA-1 |
| chr6_2 | exon | 53246164 | 53246305 | 53246164 | ID=Msa0919910-mRNA-1:exon:7953;Parent=Msa0919910-mRNA-1 |
| chr6_2 | exon | 53244787 | 53244920 | 53244787 | ID=Msa0919910-mRNA-1:exon:7952;Parent=Msa0919910-mRNA-1 |
| chr6_2 | CDS | 53247652 | 53248075 | 53247652 | ID=Msa0919910-mRNA-1:cds;Parent=Msa0919910-mRNA-1 |
| chr6_2 | CDS | 53247174 | 53247255 | 53247174 | ID=Msa0919910-mRNA-1:cds;Parent=Msa0919910-mRNA-1 |
| chr6_2 | CDS | 53246957 | 53247089 | 53246957 | ID=Msa0919910-mRNA-1:cds;Parent=Msa0919910-mRNA-1 |
| chr6_2 | CDS | 53246164 | 53246305 | 53246164 | ID=Msa0919910-mRNA-1:cds;Parent=Msa0919910-mRNA-1 |
| chr6_2 | CDS | 53244787 | 53244920 | 53244787 | ID=Msa0919910-mRNA-1:cds;Parent=Msa0919910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
