Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920180 | PNY06067.1 | 60.870 | 69 | 25 | 1 | 235 | 303 | 797 | 863 | 1.49e-15 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920180 | sp|Q05609|CTR1_ARATH | 59.091 | 66 | 25 | 1 | 236 | 301 | 688 | 751 | 6.41e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920180 | MtrunA17_Chr1g0151541 | 61.765 | 68 | 24 | 1 | 236 | 303 | 798 | 863 | 2.16e-19 | 89.4 |
| Msa0920180 | MtrunA17_Chr6g0482711 | 56.522 | 69 | 26 | 2 | 236 | 303 | 795 | 860 | 3.34e-16 | 79.7 |
| Msa0920180 | MtrunA17_Chr1g0191171 | 57.576 | 66 | 26 | 1 | 238 | 303 | 826 | 889 | 1.06e-15 | 78.2 |
| Msa0920180 | MtrunA17_Chr1g0179331 | 54.545 | 66 | 28 | 1 | 236 | 301 | 692 | 755 | 1.96e-15 | 77.4 |
| Msa0920180 | MtrunA17_Chr8g0392871 | 55.072 | 69 | 27 | 2 | 236 | 303 | 874 | 939 | 6.33e-15 | 75.9 |
| Msa0920180 | MtrunA17_Chr5g0427651 | 53.521 | 71 | 31 | 1 | 238 | 308 | 785 | 853 | 2.28e-14 | 74.3 |
| Msa0920180 | MtrunA17_Chr2g0294351 | 53.030 | 66 | 29 | 1 | 236 | 301 | 601 | 664 | 7.68e-14 | 72.4 |
| Msa0920180 | MtrunA17_Chr3g0132791 | 50.000 | 68 | 32 | 1 | 236 | 303 | 790 | 855 | 1.73e-13 | 71.6 |
| Msa0920180 | MtrunA17_Chr4g0068411 | 51.515 | 66 | 30 | 1 | 236 | 301 | 595 | 658 | 4.88e-13 | 70.1 |
| Msa0920180 | MtrunA17_Chr1g0171451 | 50.000 | 66 | 31 | 1 | 236 | 301 | 551 | 614 | 1.78e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0920180 | AT5G11850.1 | 57.353 | 68 | 27 | 1 | 236 | 303 | 744 | 809 | 3.45e-17 | 83.2 |
| Msa0920180 | AT5G03730.2 | 59.091 | 66 | 25 | 1 | 236 | 301 | 688 | 751 | 6.52e-16 | 79.3 |
| Msa0920180 | AT5G03730.1 | 59.091 | 66 | 25 | 1 | 236 | 301 | 688 | 751 | 6.52e-16 | 79.3 |
| Msa0920180 | AT1G73660.1 | 56.716 | 67 | 25 | 2 | 236 | 301 | 883 | 946 | 7.16e-15 | 76.3 |
| Msa0920180 | AT1G18160.1 | 56.716 | 67 | 25 | 2 | 236 | 301 | 850 | 913 | 1.34e-14 | 75.5 |
| Msa0920180 | AT1G18160.2 | 56.716 | 67 | 25 | 2 | 236 | 301 | 850 | 913 | 1.56e-14 | 75.1 |
| Msa0920180 | AT3G06640.2 | 52.308 | 65 | 29 | 1 | 237 | 301 | 582 | 644 | 2.12e-14 | 74.7 |
| Msa0920180 | AT3G06640.3 | 52.308 | 65 | 29 | 1 | 237 | 301 | 582 | 644 | 2.12e-14 | 74.7 |
| Msa0920180 | AT3G06640.1 | 52.308 | 65 | 29 | 1 | 237 | 301 | 582 | 644 | 2.40e-14 | 74.3 |
| Msa0920180 | AT3G06620.1 | 50.000 | 66 | 31 | 1 | 236 | 301 | 629 | 692 | 6.18e-14 | 73.2 |
| Msa0920180 | AT3G06630.4 | 50.000 | 66 | 31 | 1 | 236 | 301 | 569 | 632 | 6.39e-14 | 73.2 |
| Msa0920180 | AT3G06630.3 | 50.000 | 66 | 31 | 1 | 236 | 301 | 569 | 632 | 6.39e-14 | 73.2 |
| Msa0920180 | AT3G06630.5 | 50.000 | 66 | 31 | 1 | 236 | 301 | 569 | 632 | 6.39e-14 | 73.2 |
| Msa0920180 | AT3G06630.6 | 50.000 | 66 | 31 | 1 | 236 | 301 | 485 | 548 | 6.39e-14 | 72.8 |
| Msa0920180 | AT3G06630.2 | 50.000 | 66 | 31 | 1 | 236 | 301 | 569 | 632 | 6.90e-14 | 73.2 |
| Msa0920180 | AT3G06630.1 | 50.000 | 66 | 31 | 1 | 236 | 301 | 569 | 632 | 7.22e-14 | 72.8 |
| Msa0920180 | AT1G08720.1 | 56.061 | 66 | 27 | 1 | 238 | 303 | 806 | 869 | 9.41e-14 | 72.8 |
| Msa0920180 | AT1G08720.2 | 56.061 | 66 | 27 | 1 | 238 | 303 | 806 | 869 | 1.04e-13 | 72.8 |
| Msa0920180 | AT5G49470.5 | 50.000 | 66 | 31 | 1 | 236 | 301 | 626 | 689 | 2.19e-13 | 71.6 |
| Msa0920180 | AT5G49470.6 | 50.000 | 66 | 31 | 1 | 236 | 301 | 626 | 689 | 2.34e-13 | 71.2 |
| Msa0920180 | AT5G49470.3 | 50.746 | 67 | 29 | 2 | 236 | 301 | 626 | 689 | 2.41e-13 | 71.2 |
| Msa0920180 | AT5G49470.7 | 50.000 | 66 | 31 | 1 | 236 | 301 | 499 | 562 | 2.67e-13 | 71.2 |
| Msa0920180 | AT5G49470.4 | 50.000 | 66 | 31 | 1 | 236 | 301 | 600 | 663 | 3.18e-13 | 70.9 |
| Msa0920180 | AT5G49470.2 | 50.000 | 66 | 31 | 1 | 236 | 301 | 687 | 750 | 3.77e-13 | 70.9 |
| Msa0920180 | AT5G49470.1 | 50.000 | 66 | 31 | 1 | 236 | 301 | 339 | 402 | 4.00e-13 | 70.5 |
| Msa0920180 | AT1G67890.1 | 50.746 | 67 | 28 | 2 | 236 | 301 | 622 | 684 | 4.07e-13 | 70.9 |
| Msa0920180 | AT1G67890.3 | 50.746 | 67 | 28 | 2 | 236 | 301 | 622 | 684 | 4.32e-13 | 70.5 |
| Msa0920180 | AT1G67890.2 | 50.746 | 67 | 28 | 2 | 236 | 301 | 622 | 684 | 4.32e-13 | 70.5 |
| Msa0920180 | AT4G24480.1 | 50.000 | 68 | 32 | 1 | 236 | 303 | 811 | 876 | 4.44e-13 | 70.9 |
| Msa0920180 | AT4G24480.2 | 50.000 | 68 | 32 | 1 | 236 | 303 | 806 | 871 | 4.68e-13 | 70.5 |
| Msa0920180 | AT4G24480.3 | 50.000 | 68 | 32 | 1 | 236 | 303 | 806 | 871 | 4.71e-13 | 70.5 |
| Msa0920180 | AT1G67890.4 | 50.746 | 67 | 28 | 2 | 236 | 301 | 494 | 556 | 6.32e-13 | 70.1 |
Find 77 sgRNAs with CRISPR-Local
Find 506 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATAACAGGTCTGTAATTT+TGG | 0.189406 | 6_2:+53955053 | Msa0920180:intron |
| TTCTTGAGTATGAACCAATT+TGG | 0.219703 | 6_2:+53954887 | Msa0920180:CDS |
| TTCTTTGGTACCTAAAATTT+TGG | 0.226052 | 6_2:-53954932 | None:intergenic |
| GTCAATTTACTTGTCCAAAT+TGG | 0.252549 | 6_2:-53954901 | None:intergenic |
| TTCTCGTTCCTTAAGACTTC+TGG | 0.278013 | 6_2:-53960213 | None:intergenic |
| TTCACGTTCCTTAAGACTTC+TGG | 0.282915 | 6_2:-53955302 | None:intergenic |
| AGCATACACCACGTCTTCTT+TGG | 0.289905 | 6_2:-53954947 | None:intergenic |
| CCCCGCCAACGCCTAATGGC+TGG | 0.317133 | 6_2:-53957878 | None:intergenic |
| TTAAAATGAGAGACATAAAA+TGG | 0.330393 | 6_2:-53957548 | None:intergenic |
| CCCAGCCATTAGGCGTTGGC+GGG | 0.397905 | 6_2:+53957877 | Msa0920180:CDS |
| AGGTCTAATGTATATAGTTT+TGG | 0.403175 | 6_2:+53960330 | Msa0920180:intron |
| GTCTCCATGGGTTGGTCTCA+TGG | 0.407911 | 6_2:+53957596 | Msa0920180:CDS |
| CGTACTCCAACACGATTCTC+AGG | 0.420216 | 6_2:+53956235 | Msa0920180:CDS |
| ACAGCGTGGGTGGGCGTGGA+TGG | 0.427837 | 6_2:+53960188 | Msa0920180:intron |
| TAGGTACCGTGAGCAGTTTA+AGG | 0.430781 | 6_2:+53960398 | Msa0920180:CDS |
| TCGGAAAAGCGCAGAGAGGC+TGG | 0.432763 | 6_2:+53957906 | Msa0920180:CDS |
| CCCCACACGCGAAGGTATCT+CGG | 0.434094 | 6_2:-53957838 | None:intergenic |
| CATTCGTCGTCATAGGCAAT+TGG | 0.434463 | 6_2:+53955948 | Msa0920180:CDS |
| ATCAGAGTCTTGTGCTAGTA+AGG | 0.438821 | 6_2:+53955112 | Msa0920180:CDS |
| TCATACAGCGTGGGTGGGCG+TGG | 0.439687 | 6_2:+53960184 | Msa0920180:intron |
| CAGATCTCATTCGTCGTCAT+AGG | 0.447269 | 6_2:+53955941 | Msa0920180:CDS |
| GGATGGTGCCAGAAGTCTTA+AGG | 0.459447 | 6_2:+53960205 | Msa0920180:CDS |
| GGATGGCGCCAGAAGTCTTA+AGG | 0.461886 | 6_2:+53955294 | Msa0920180:CDS |
| CTGAGAATCGTGTTGGAGTA+CGG | 0.478404 | 6_2:-53956234 | None:intergenic |
| CCCGAGATACCTTCGCGTGT+GGG | 0.480363 | 6_2:+53957837 | Msa0920180:CDS |
| TTAGAGAGTGTATTTGATTG+TGG | 0.480819 | 6_2:+53956316 | Msa0920180:CDS |
| CATCGAAGTTCCCATTCTGC+TGG | 0.481578 | 6_2:-53956279 | None:intergenic |
| TTTCTTATAGTTTAAGTGGA+TGG | 0.481680 | 6_2:+53955277 | Msa0920180:intron |
| ACCCAGCCATTAGGCGTTGG+CGG | 0.494032 | 6_2:+53957876 | Msa0920180:CDS |
| TGAGAATCGTGTTGGAGTAC+GGG | 0.501878 | 6_2:-53956233 | None:intergenic |
| CACGGTACCTACCACACCAT+GGG | 0.505308 | 6_2:-53960386 | None:intergenic |
| GCGATCAACAGAGCAGTTGC+TGG | 0.506944 | 6_2:+53962121 | Msa0920180:CDS |
| AGACGTGGTGTATGCTTTGG+TGG | 0.512864 | 6_2:+53954954 | Msa0920180:CDS |
| GAGAAGGATGGGCGCGTCTG+TGG | 0.514195 | 6_2:-53955919 | None:intergenic |
| ACTTCTAATACCTGTCTCCA+TGG | 0.515682 | 6_2:+53957583 | Msa0920180:CDS |
| AACAGAGCAGTTGCTGGCTG+CGG | 0.516005 | 6_2:+53962127 | Msa0920180:CDS |
| CCCCGAGATACCTTCGCGTG+TGG | 0.516116 | 6_2:+53957836 | Msa0920180:CDS |
| CCAGCCATTAGGCGTTGGCG+GGG | 0.519666 | 6_2:+53957878 | Msa0920180:CDS |
| CAGCCATTAGGCGTTGGCGG+GGG | 0.519883 | 6_2:+53957879 | Msa0920180:CDS |
| AGAGCAGTTGCTGGCTGCGG+TGG | 0.520792 | 6_2:+53962130 | Msa0920180:CDS |
| ATCAGAGAGTTGTACTAGAA+AGG | 0.521333 | 6_2:+53960018 | Msa0920180:CDS |
| CAGCAGAATGGGAACTTCGA+TGG | 0.524958 | 6_2:+53956280 | Msa0920180:CDS |
| GAATGAGATCTGAGAAGGAT+GGG | 0.528064 | 6_2:-53955930 | None:intergenic |
| TAATACCTGTCTCCATGGGT+TGG | 0.531740 | 6_2:+53957588 | Msa0920180:CDS |
| AAAATGGACAAGCAGAATGA+AGG | 0.534669 | 6_2:-53957532 | None:intergenic |
| GTGAGCAGTTTAAGGATCGC+TGG | 0.540388 | 6_2:+53960406 | Msa0920180:CDS |
| CGAATGAGATCTGAGAAGGA+TGG | 0.540726 | 6_2:-53955931 | None:intergenic |
| CCACATGCGACCCAGCCATT+AGG | 0.545500 | 6_2:+53957867 | Msa0920180:CDS |
| TGAGACCAACCCATGGAGAC+AGG | 0.546653 | 6_2:-53957593 | None:intergenic |
| TACCGTGCTGTTGATCGCCA+TGG | 0.546764 | 6_2:+53956514 | Msa0920180:CDS |
| AGCAGAATGGGAACTTCGAT+GGG | 0.548313 | 6_2:+53956281 | Msa0920180:CDS |
| ATTGTGGTAAGTGTATTCCC+AGG | 0.575379 | 6_2:+53956332 | Msa0920180:CDS |
| AGAAGACGTGGTGTATGCTT+TGG | 0.579034 | 6_2:+53954951 | Msa0920180:CDS |
| CTTCTAATACCTGTCTCCAT+GGG | 0.584609 | 6_2:+53957584 | Msa0920180:CDS |
| CTGGACCCTGAGAATCGTGT+TGG | 0.588416 | 6_2:-53956241 | None:intergenic |
| TCCTATCAGTGATGGAGTTG+TGG | 0.593732 | 6_2:+53962099 | Msa0920180:intron |
| CCTAATGGCTGGGTCGCATG+TGG | 0.600373 | 6_2:-53957867 | None:intergenic |
| TCACGGTACCTACCACACCA+TGG | 0.600731 | 6_2:-53960387 | None:intergenic |
| AGCGATCCTTAAACTGCTCA+CGG | 0.604851 | 6_2:-53960404 | None:intergenic |
| CGCAAACCCCATGGTGTGGT+AGG | 0.612552 | 6_2:+53960379 | Msa0920180:CDS |
| TGAGAAGACTTACATTGCCA+TGG | 0.615435 | 6_2:-53956531 | None:intergenic |
| ACCACACCATGGGGTTTGCG+TGG | 0.619359 | 6_2:-53960376 | None:intergenic |
| ACGACGAATGAGATCTGAGA+AGG | 0.621412 | 6_2:-53955935 | None:intergenic |
| TTGTGGTAAGTGTATTCCCA+GGG | 0.628970 | 6_2:+53956333 | Msa0920180:CDS |
| GGTATAAACCCCACACGCGA+AGG | 0.631053 | 6_2:-53957846 | None:intergenic |
| AGAATGGGAACTTCGATGGG+AGG | 0.639679 | 6_2:+53956284 | Msa0920180:CDS |
| ACCACGCAAACCCCATGGTG+TGG | 0.640489 | 6_2:+53960375 | Msa0920180:CDS |
| TGCCATGGCGATCAACAGCA+CGG | 0.652888 | 6_2:-53956516 | None:intergenic |
| TAACTACCACGCAAACCCCA+TGG | 0.657115 | 6_2:+53960370 | Msa0920180:CDS |
| TTTAGGTACCAAAGAAGACG+TGG | 0.665242 | 6_2:+53954939 | Msa0920180:CDS |
| GTACTCCAACACGATTCTCA+GGG | 0.669361 | 6_2:+53956236 | Msa0920180:CDS |
| TCTCTGATGACAGACATGCA+TGG | 0.679359 | 6_2:-53960003 | None:intergenic |
| ACTCTGATGACAGACGTGCA+TGG | 0.694479 | 6_2:-53955097 | None:intergenic |
| CCACTCGGAAAAGCGCAGAG+AGG | 0.698474 | 6_2:+53957902 | Msa0920180:CDS |
| ACGGTACCTACCACACCATG+GGG | 0.707663 | 6_2:-53960385 | None:intergenic |
| TATACCATGAGACCAACCCA+TGG | 0.709000 | 6_2:-53957600 | None:intergenic |
| CACACGCGAAGGTATCTCGG+GGG | 0.774150 | 6_2:-53957835 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAACTTTTTCA+TGG | + | chr6_2:53959571-53959590 | Msa0920180:intron | 10.0% |
| !!! | AAAAAAAAAAAAAACTTGTT+TGG | + | chr6_2:53960990-53961009 | Msa0920180:intron | 10.0% |
| !!! | TTAATAATTTTATTTTGATC+CGG | - | chr6_2:53961156-53961175 | None:intergenic | 10.0% |
| !!! | ATTATGTCTATATTTTAAAT+AGG | - | chr6_2:53961762-53961781 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTTATATAAGAAA+CGG | - | chr6_2:53961944-53961963 | None:intergenic | 10.0% |
| !!! | ATTGTTATTGTTATTACTAT+TGG | + | chr6_2:53955011-53955030 | Msa0920180:intron | 15.0% |
| !!! | TGATATTTTTATTGTATAAC+AGG | + | chr6_2:53955040-53955059 | Msa0920180:intron | 15.0% |
| !!! | TATTTTTCTTATAGTTTAAG+TGG | + | chr6_2:53955273-53955292 | Msa0920180:intron | 15.0% |
| !!! | TAAAAATTTGTTAACCTTTA+CGG | - | chr6_2:53955520-53955539 | None:intergenic | 15.0% |
| !! | GTTATTACATTTACTTAAAT+AGG | + | chr6_2:53955582-53955601 | Msa0920180:intron | 15.0% |
| !!! | TTTTTAGTTAATTGTGTTAT+TGG | + | chr6_2:53955860-53955879 | Msa0920180:intron | 15.0% |
| !!! | AATATTTTTTAGTTAATGCA+TGG | + | chr6_2:53956685-53956704 | Msa0920180:intron | 15.0% |
| !!! | TTTTTTTTTGTCTCAAAATT+TGG | - | chr6_2:53956889-53956908 | None:intergenic | 15.0% |
| !!! | AAAACATATTTTAATGTTGT+TGG | + | chr6_2:53956916-53956935 | Msa0920180:intron | 15.0% |
| !! | ATTTACTTATTAATATAGGT+AGG | + | chr6_2:53958188-53958207 | Msa0920180:intron | 15.0% |
| !! | TTTACTTATTAATATAGGTA+GGG | + | chr6_2:53958189-53958208 | Msa0920180:intron | 15.0% |
| !! | TTTACTTATTAATATAGGTA+GGG | - | chr6_2:53958189-53958208 | None:intergenic | 15.0% |
| !! | ATTTACTTATTAATATAGGT+AGG | - | chr6_2:53958188-53958207 | None:intergenic | 15.0% |
| !! | TAAATTACAATAATATAACC+TGG | + | chr6_2:53960109-53960128 | Msa0920180:intron | 15.0% |
| !!! | AAAAAGTGTAAAATAATTGA+TGG | - | chr6_2:53960723-53960742 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGTGCAAATAA+GGG | - | chr6_2:53960977-53960996 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGTGCAAATA+AGG | - | chr6_2:53960978-53960997 | None:intergenic | 15.0% |
| !! | ATTAAAATTAATTTCTTGTC+CGG | + | chr6_2:53961171-53961190 | Msa0920180:intron | 15.0% |
| !! | TTATTCATTCCTATTTAAAA+AGG | + | chr6_2:53961794-53961813 | Msa0920180:intron | 15.0% |
| !! | AATAATTTGACACTAAATAA+CGG | - | chr6_2:53961897-53961916 | None:intergenic | 15.0% |
| !! | AAAGAAAATATAGAAACTAA+CGG | + | chr6_2:53961958-53961977 | Msa0920180:intron | 15.0% |
| !!! | TTTACGTTGTTTTTCATAAA+AGG | - | chr6_2:53955249-53955268 | None:intergenic | 20.0% |
| !!! | ATAATTAACTTACTTTTCAC+TGG | - | chr6_2:53955330-53955349 | None:intergenic | 20.0% |
| !!! | AAAAGCCTATTTAACTTAAA+AGG | - | chr6_2:53955654-53955673 | None:intergenic | 20.0% |
| !!! | GCTTTTTTTTTAAATAGACA+AGG | - | chr6_2:53955690-53955709 | None:intergenic | 20.0% |
| !! | AATTACATTCCCTATTAATA+GGG | - | chr6_2:53955780-53955799 | None:intergenic | 20.0% |
| !! | AAATTACATTCCCTATTAAT+AGG | - | chr6_2:53955781-53955800 | None:intergenic | 20.0% |
| !! | AATAGGGAATGTAATTTAAA+CGG | + | chr6_2:53955784-53955803 | Msa0920180:intron | 20.0% |
| !! | AACATAAGAATACAAATTTG+TGG | + | chr6_2:53955817-53955836 | Msa0920180:intron | 20.0% |
| !! | TTACATCATAAAAAGAGATA+TGG | - | chr6_2:53956441-53956460 | None:intergenic | 20.0% |
| !! | AAACATAATTGAAACTTACA+AGG | - | chr6_2:53957054-53957073 | None:intergenic | 20.0% |
| !! | AGTTGTAAATGAAACATTAA+AGG | + | chr6_2:53957084-53957103 | Msa0920180:intron | 20.0% |
| !! | CATTAAAGGTAAATAAAGTT+AGG | + | chr6_2:53957098-53957117 | Msa0920180:intron | 20.0% |
| !! | AAAGGGCAAAAAAAAAAAAA+AGG | - | chr6_2:53957457-53957476 | None:intergenic | 20.0% |
| !! | TTAAAATGAGAGACATAAAA+TGG | - | chr6_2:53957551-53957570 | None:intergenic | 20.0% |
| !!! | TTATGTCTCTCATTTTAATT+TGG | + | chr6_2:53957553-53957572 | Msa0920180:CDS | 20.0% |
| !!! | TATTATTTTTCCTTTGAATG+CGG | - | chr6_2:53958706-53958725 | None:intergenic | 20.0% |
| !!! | TTGACGCTATAAATTTTTTT+AGG | - | chr6_2:53958262-53958281 | None:intergenic | 20.0% |
| !!! | ATTTTCAAAACAGGAAAATT+TGG | - | chr6_2:53958466-53958485 | None:intergenic | 20.0% |
| !!! | ATTTTCCTGTTTTGAAAATT+TGG | + | chr6_2:53958467-53958486 | Msa0920180:intron | 20.0% |
| !! | CTAGATCAAAAAAATTCAAT+AGG | + | chr6_2:53958622-53958641 | Msa0920180:intron | 20.0% |
| !! | CAAAAAAATTCAATAGGAAA+CGG | + | chr6_2:53958628-53958647 | Msa0920180:intron | 20.0% |
| !!! | TGACGCTATAATTTTTTTTT+AGG | + | chr6_2:53958664-53958683 | Msa0920180:intron | 20.0% |
| !! | AGAAGTTAACTAAATAAAAG+TGG | + | chr6_2:53959410-53959429 | Msa0920180:intron | 20.0% |
| !!! | GTATCATTTGAACTTTTTAT+TGG | + | chr6_2:53959541-53959560 | Msa0920180:intron | 20.0% |
| !!! | TTTTTAAAACTTTTTCATGG+AGG | + | chr6_2:53959574-53959593 | Msa0920180:intron | 20.0% |
| !! | ACATTATAAAATACAGATCT+TGG | - | chr6_2:53959772-53959791 | None:intergenic | 20.0% |
| !! | TAGATGATTAATTAACCAAT+AGG | - | chr6_2:53960087-53960106 | None:intergenic | 20.0% |
| !! | TAACAATCAGAAAATGTAAA+TGG | - | chr6_2:53960452-53960471 | None:intergenic | 20.0% |
| !! | ACATTCTAATGTAATGAAAA+GGG | - | chr6_2:53960515-53960534 | None:intergenic | 20.0% |
| !!! | TTTTCATTACATTAGAATGT+GGG | + | chr6_2:53960515-53960534 | Msa0920180:intron | 20.0% |
| !!! | TTTAGGTATTGTTTGTTTTA+TGG | - | chr6_2:53960876-53960895 | None:intergenic | 20.0% |
| !! | AAACAATACAACAATCATTT+AGG | - | chr6_2:53960893-53960912 | None:intergenic | 20.0% |
| !!! | TGATTTTTGAAACAATTTAC+CGG | + | chr6_2:53961134-53961153 | Msa0920180:intron | 20.0% |
| !!! | TTTTTTTAAGACAATTGAAC+CGG | - | chr6_2:53961193-53961212 | None:intergenic | 20.0% |
| !! | TTTAGTGTCAAATTATTTAG+AGG | + | chr6_2:53961900-53961919 | Msa0920180:intron | 20.0% |
| !!! | TACCTAAAATTTTGGTGTAA+GGG | - | chr6_2:53954927-53954946 | None:intergenic | 25.0% |
| !! | TTCTTTGGTACCTAAAATTT+TGG | - | chr6_2:53954935-53954954 | None:intergenic | 25.0% |
| ! | TAGATGATTAATTAACCAAC+AGG | - | chr6_2:53955182-53955201 | None:intergenic | 25.0% |
| ! | TAATACCTGATTTCTTTGTA+AGG | + | chr6_2:53955214-53955233 | Msa0920180:intron | 25.0% |
| ! | ATAAACCTTACAAAGAAATC+AGG | - | chr6_2:53955222-53955241 | None:intergenic | 25.0% |
| ! | TTTCTTATAGTTTAAGTGGA+TGG | + | chr6_2:53955277-53955296 | Msa0920180:intron | 25.0% |
| ! | AAAGCCAAATATAAGAGTTT+AGG | + | chr6_2:53955369-53955388 | Msa0920180:intron | 25.0% |
| ! | ACATCCTAAACTCTTATATT+TGG | - | chr6_2:53955376-53955395 | None:intergenic | 25.0% |
| ! | ATAGGGAATGTAATTTAAAC+GGG | + | chr6_2:53955785-53955804 | Msa0920180:intron | 25.0% |
| ! | ACAAATTTGTGGAAACTATA+TGG | + | chr6_2:53955828-53955847 | Msa0920180:intron | 25.0% |
| !!! | TTGTGTTATTGGATTGATTT+TGG | + | chr6_2:53955871-53955890 | Msa0920180:intron | 25.0% |
| !!! | TTGTGTTGTTTTTTAATGCA+GGG | + | chr6_2:53955894-53955913 | Msa0920180:intron | 25.0% |
| !!! | ACGTAATTTTTTGGATATAC+AGG | + | chr6_2:53956361-53956380 | Msa0920180:intron | 25.0% |
| ! | AGAAACAAAATGTGACAAAT+CGG | - | chr6_2:53956716-53956735 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCTCTTTGCT+GGG | - | chr6_2:53957143-53957162 | None:intergenic | 25.0% |
| !!! | AATTTTGTTTTTCTCTTTGC+TGG | - | chr6_2:53957144-53957163 | None:intergenic | 25.0% |
| !! | AAGAATAATTGTTGTTACGA+AGG | - | chr6_2:53957189-53957208 | None:intergenic | 25.0% |
| ! | ATCTGAACTTAGTTGTTTAA+TGG | + | chr6_2:53957249-53957268 | Msa0920180:intron | 25.0% |
| ! | AGGTCTTGATTAAGTTTAAT+CGG | + | chr6_2:53957361-53957380 | Msa0920180:intron | 25.0% |
| ! | TAAGTTTAATCGGTAAGTTT+AGG | + | chr6_2:53957371-53957390 | Msa0920180:intron | 25.0% |
| ! | AAGTTTAATCGGTAAGTTTA+GGG | + | chr6_2:53957372-53957391 | Msa0920180:intron | 25.0% |
| !!! | AAAAAAAAAAAAAGGCATCC+CGG | - | chr6_2:53957449-53957468 | None:intergenic | 25.0% |
| ! | GTGCATATTCATCAATAAAA+GGG | - | chr6_2:53957474-53957493 | None:intergenic | 25.0% |
| !!! | CAAGTTGTCCATTTTAAAAT+AGG | + | chr6_2:53957800-53957819 | Msa0920180:intron | 25.0% |
| !!! | TCCTCTCTATTTTTAAACTA+TGG | - | chr6_2:53958060-53958079 | None:intergenic | 25.0% |
| ! | AAATTTATAGCGTCAAACTT+AGG | + | chr6_2:53958266-53958285 | Msa0920180:intron | 25.0% |
| ! | AATGAAAATCTCTCCAAATT+TGG | - | chr6_2:53958376-53958395 | None:intergenic | 25.0% |
| !! | AAAAGCCAAATTTTCAAAAC+AGG | - | chr6_2:53958475-53958494 | None:intergenic | 25.0% |
| !!! | TGTTTTGAAAATTTGGCTTT+TGG | + | chr6_2:53958474-53958493 | Msa0920180:intron | 25.0% |
| ! | ACATTTGATATCTCCAAATT+TGG | + | chr6_2:53958564-53958583 | Msa0920180:intron | 25.0% |
| ! | TCTAGTAAGATCATGAATTT+GGG | - | chr6_2:53958607-53958626 | None:intergenic | 25.0% |
| ! | ATCTAGTAAGATCATGAATT+TGG | - | chr6_2:53958608-53958627 | None:intergenic | 25.0% |
| ! | AAAATTATAGCGTCAAACTT+GGG | - | chr6_2:53958659-53958678 | None:intergenic | 25.0% |
| ! | AAAAATTATAGCGTCAAACT+TGG | - | chr6_2:53958660-53958679 | None:intergenic | 25.0% |
| !!! | TATAAAAATATAGAGCATCG+TGG | - | chr6_2:53958863-53958882 | None:intergenic | 25.0% |
| !!! | GTTGTTTTGACCAAATAAAA+GGG | + | chr6_2:53958932-53958951 | Msa0920180:intron | 25.0% |
| !!! | TTCCTTGCTTCTTTTTAAAA+TGG | + | chr6_2:53959121-53959140 | Msa0920180:intron | 25.0% |
| !!! | ATCCATTTTAAAAAGAAGCA+AGG | - | chr6_2:53959126-53959145 | None:intergenic | 25.0% |
| ! | TTAACTAAATAAAAGTGGAG+TGG | + | chr6_2:53959415-53959434 | Msa0920180:intron | 25.0% |
| !! | GTTTTGTAAGTATATCTACA+AGG | - | chr6_2:53959638-53959657 | None:intergenic | 25.0% |
| ! | GAAATCATTTAACAATGGAT+AGG | - | chr6_2:53959675-53959694 | None:intergenic | 25.0% |
| ! | GTGATGAAATCATTTAACAA+TGG | - | chr6_2:53959680-53959699 | None:intergenic | 25.0% |
| ! | ACGTAAAAAAAATTGTTCTC+CGG | - | chr6_2:53959893-53959912 | None:intergenic | 25.0% |
| ! | CTTTAATTGTAACAAGGTAA+AGG | - | chr6_2:53959922-53959941 | None:intergenic | 25.0% |
| ! | CTTTACCTTGTTACAATTAA+AGG | + | chr6_2:53959920-53959939 | Msa0920180:intron | 25.0% |
| !!! | AGAAATGTTTGTTGTATAAC+AGG | + | chr6_2:53959949-53959968 | Msa0920180:intron | 25.0% |
| ! | ATATACTTTACAAAGAAACC+AGG | - | chr6_2:53960130-53960149 | None:intergenic | 25.0% |
| !! | ATATATTTTTCATACAGCGT+GGG | + | chr6_2:53960175-53960194 | Msa0920180:intron | 25.0% |
| !! | AGGTCTAATGTATATAGTTT+TGG | + | chr6_2:53960330-53960349 | Msa0920180:intron | 25.0% |
| ! | TTAGAATCCAGAACTATATT+TGG | + | chr6_2:53960474-53960493 | Msa0920180:intron | 25.0% |
| ! | AATGAAAAGGGTAATAAACA+TGG | - | chr6_2:53960503-53960522 | None:intergenic | 25.0% |
| ! | CACATTCTAATGTAATGAAA+AGG | - | chr6_2:53960516-53960535 | None:intergenic | 25.0% |
| !! | CTTTTCATTACATTAGAATG+TGG | + | chr6_2:53960514-53960533 | Msa0920180:intron | 25.0% |
| ! | TAATCCATCTATCTTGATAA+GGG | - | chr6_2:53960689-53960708 | None:intergenic | 25.0% |
| ! | AAGTGTAAAATAATTGATGG+TGG | - | chr6_2:53960720-53960739 | None:intergenic | 25.0% |
| ! | TAACTGCTAGTTATATTCAA+TGG | + | chr6_2:53961061-53961080 | Msa0920180:intron | 25.0% |
| !!! | GATATCCAATTAGTTGATTT+TGG | - | chr6_2:53961230-53961249 | None:intergenic | 25.0% |
| ! | TCTTTACTTCTCTATATATC+AGG | + | chr6_2:53961548-53961567 | Msa0920180:intron | 25.0% |
| !! | TGCAAGTTTATTGTTACTTA+AGG | + | chr6_2:53961571-53961590 | Msa0920180:intron | 25.0% |
| !! | GCAAGTTTATTGTTACTTAA+GGG | + | chr6_2:53961572-53961591 | Msa0920180:intron | 25.0% |
| ! | GAAATGAAAAGTTCAAAACA+TGG | - | chr6_2:53961722-53961741 | None:intergenic | 25.0% |
| !! | CTGTCATATCCTTTTTAAAT+AGG | - | chr6_2:53961806-53961825 | None:intergenic | 25.0% |
| ! | AAATTATTTAGAGGTAGTAG+CGG | + | chr6_2:53961909-53961928 | Msa0920180:intron | 25.0% |
| TTCTTGAGTATGAACCAATT+TGG | + | chr6_2:53954887-53954906 | Msa0920180:CDS | 30.0% | |
| GTCAATTTACTTGTCCAAAT+TGG | - | chr6_2:53954904-53954923 | None:intergenic | 30.0% | |
| !! | ACCTAAAATTTTGGTGTAAG+GGG | - | chr6_2:53954926-53954945 | None:intergenic | 30.0% |
| !! | GTACCTAAAATTTTGGTGTA+AGG | - | chr6_2:53954928-53954947 | None:intergenic | 30.0% |
| ! | GTATAACAGGTCTGTAATTT+TGG | + | chr6_2:53955053-53955072 | Msa0920180:intron | 30.0% |
| !!! | GTTTGCATGATGTGTTTTTT+AGG | + | chr6_2:53955406-53955425 | Msa0920180:intron | 30.0% |
| CTTAAATAGGTCGACATAAT+AGG | + | chr6_2:53955595-53955614 | Msa0920180:intron | 30.0% | |
| !! | ATAGGCTTTTAAAAAAGCCT+AGG | + | chr6_2:53955664-53955683 | Msa0920180:intron | 30.0% |
| ! | TTTTTAAATAGACAAGGCCT+AGG | - | chr6_2:53955684-53955703 | None:intergenic | 30.0% |
| TATTCCCATCCCTATTAATA+GGG | + | chr6_2:53955768-53955787 | Msa0920180:intron | 30.0% | |
| TGTAATTTAAACGGGTGATT+TGG | + | chr6_2:53955793-53955812 | Msa0920180:intron | 30.0% | |
| !!! | GTTGTGTTGTTTTTTAATGC+AGG | + | chr6_2:53955893-53955912 | Msa0920180:intron | 30.0% |
| !! | TCTTTGAAATTGCCATTACA+GGG | - | chr6_2:53955977-53955996 | None:intergenic | 30.0% |
| !! | TTCTTTGAAATTGCCATTAC+AGG | - | chr6_2:53955978-53955997 | None:intergenic | 30.0% |
| ! | TTAGAGAGTGTATTTGATTG+TGG | + | chr6_2:53956316-53956335 | Msa0920180:CDS | 30.0% |
| CATTAACAGAGATCAAGTAA+AGG | + | chr6_2:53956398-53956417 | Msa0920180:intron | 30.0% | |
| ! | TTTTGCAGTATGTACCTAAA+AGG | - | chr6_2:53956492-53956511 | None:intergenic | 30.0% |
| AAACAAAATGTGACAAATCG+GGG | - | chr6_2:53956714-53956733 | None:intergenic | 30.0% | |
| GAAACAAAATGTGACAAATC+GGG | - | chr6_2:53956715-53956734 | None:intergenic | 30.0% | |
| AATTACTCATGGAACAGAAA+CGG | - | chr6_2:53956770-53956789 | None:intergenic | 30.0% | |
| TTTCTTCACACAATTACTCA+TGG | - | chr6_2:53956781-53956800 | None:intergenic | 30.0% | |
| GGGTTATTAAGATAAAGAGA+AGG | - | chr6_2:53956957-53956976 | None:intergenic | 30.0% | |
| ! | CTAAGACGAAAGTGTAATTT+GGG | - | chr6_2:53956977-53956996 | None:intergenic | 30.0% |
| ! | ACTAAGACGAAAGTGTAATT+TGG | - | chr6_2:53956978-53956997 | None:intergenic | 30.0% |
| ! | GATTTTTGTCAGTTGAAGAA+AGG | + | chr6_2:53957332-53957351 | Msa0920180:intron | 30.0% |
| GGTGCATATTCATCAATAAA+AGG | - | chr6_2:53957475-53957494 | None:intergenic | 30.0% | |
| !!! | CTCTCATTTTAATTTGGTGT+TGG | + | chr6_2:53957559-53957578 | Msa0920180:CDS | 30.0% |
| TAATGTCATTGACAACAACT+GGG | - | chr6_2:53957674-53957693 | None:intergenic | 30.0% | |
| !!! | TGTCCATTTTAAAATAGGCA+AGG | + | chr6_2:53957805-53957824 | Msa0920180:intron | 30.0% |
| !! | AGTCCTTGCCTATTTTAAAA+TGG | - | chr6_2:53957811-53957830 | None:intergenic | 30.0% |
| ! | GTTGTTTCGACCAAATAAAA+GGG | - | chr6_2:53957999-53958018 | None:intergenic | 30.0% |
| GCCATAGTTTAAAAATAGAG+AGG | + | chr6_2:53958056-53958075 | Msa0920180:intron | 30.0% | |
| TTAAAAATAGAGAGGATCGT+AGG | + | chr6_2:53958064-53958083 | Msa0920180:intron | 30.0% | |
| !! | AAATTTGGCTTAAACGCTTT+TGG | - | chr6_2:53958361-53958380 | None:intergenic | 30.0% |
| !! | AAAAGCGTTTAAGCCAAATT+TGG | + | chr6_2:53958360-53958379 | Msa0920180:intron | 30.0% |
| ATCGAAAAAGAAGGATGAAT+GGG | - | chr6_2:53958412-53958431 | None:intergenic | 30.0% | |
| AATCGAAAAAGAAGGATGAA+TGG | - | chr6_2:53958413-53958432 | None:intergenic | 30.0% | |
| ATTTGCAGAGATCATGAATT+TGG | + | chr6_2:53958430-53958449 | Msa0920180:intron | 30.0% | |
| TTTGCAGAGATCATGAATTT+GGG | + | chr6_2:53958431-53958450 | Msa0920180:intron | 30.0% | |
| !!! | AAACAGGAAAATTTGGCTTT+TGG | - | chr6_2:53958459-53958478 | None:intergenic | 30.0% |
| TTTGCAGAGATCATGAATTT+GGG | - | chr6_2:53958431-53958450 | None:intergenic | 30.0% | |
| ATTTGCAGAGATCATGAATT+TGG | - | chr6_2:53958430-53958449 | None:intergenic | 30.0% | |
| AATCGTAAAAGAAGGATGAA+TGG | + | chr6_2:53958520-53958539 | Msa0920180:intron | 30.0% | |
| ATCGTAAAAGAAGGATGAAT+GGG | + | chr6_2:53958521-53958540 | Msa0920180:intron | 30.0% | |
| AAGTGCATTTAAGCCAAATT+TGG | - | chr6_2:53958580-53958599 | None:intergenic | 30.0% | |
| ! | ATGATGATGTTTGTGTATAG+AGG | - | chr6_2:53958805-53958824 | None:intergenic | 30.0% |
| !!! | GGTTGTTTTGACCAAATAAA+AGG | + | chr6_2:53958931-53958950 | Msa0920180:intron | 30.0% |
| TTTAAATTCCAGACCTCAAA+AGG | - | chr6_2:53959212-53959231 | None:intergenic | 30.0% | |
| CTGGAATTTAAAAGTTGAAG+AGG | + | chr6_2:53959220-53959239 | Msa0920180:intron | 30.0% | |
| TTTAAAAGTTGAAGAGGATG+TGG | + | chr6_2:53959226-53959245 | Msa0920180:intron | 30.0% | |
| ATATTACCTTTACAACATCC+AGG | - | chr6_2:53959257-53959276 | None:intergenic | 30.0% | |
| TCTACATTTATTTCCACTTC+TGG | + | chr6_2:53959387-53959406 | Msa0920180:intron | 30.0% | |
| !! | TGTTCACAGTTTTTATTTCC+TGG | + | chr6_2:53959455-53959474 | Msa0920180:intron | 30.0% |
| ! | TCAATTTCTTATTTGTCACC+AGG | - | chr6_2:53959476-53959495 | None:intergenic | 30.0% |
| CAGTTCTATCACTACTTTAT+TGG | - | chr6_2:53959522-53959541 | None:intergenic | 30.0% | |
| !! | ATTGAGGAAGTATTTGTAAG+TGG | + | chr6_2:53959612-53959631 | Msa0920180:intron | 30.0% |
| ATCGACCTTTAATTGTAACA+AGG | - | chr6_2:53959928-53959947 | None:intergenic | 30.0% | |
| AAAATTCTGTGATGACCTAT+TGG | + | chr6_2:53960069-53960088 | Msa0920180:intron | 30.0% | |
| ! | CATATATTTTTCATACAGCG+TGG | + | chr6_2:53960174-53960193 | Msa0920180:intron | 30.0% |
| AAAGCCAGATATAAGAGTTT+AGG | + | chr6_2:53960280-53960299 | Msa0920180:intron | 30.0% | |
| ACATCCTAAACTCTTATATC+TGG | - | chr6_2:53960287-53960306 | None:intergenic | 30.0% | |
| ATGGTAACCAAATATAGTTC+TGG | - | chr6_2:53960484-53960503 | None:intergenic | 30.0% | |
| GTAAAGAAATGTGAATCTCT+TGG | - | chr6_2:53960541-53960560 | None:intergenic | 30.0% | |
| GTGTCAATTCAATTGTAATG+TGG | - | chr6_2:53960575-53960594 | None:intergenic | 30.0% | |
| CTAATCCATCTATCTTGATA+AGG | - | chr6_2:53960690-53960709 | None:intergenic | 30.0% | |
| !! | ATCAAGATAGATGGATTAGA+AGG | + | chr6_2:53960691-53960710 | Msa0920180:intron | 30.0% |
| !! | TCAAGATAGATGGATTAGAA+GGG | + | chr6_2:53960692-53960711 | Msa0920180:intron | 30.0% |
| TCCAAATAGAAGAAATTGAG+AGG | + | chr6_2:53960763-53960782 | Msa0920180:intron | 30.0% | |
| TCCTCTCAATTTCTTCTATT+TGG | - | chr6_2:53960767-53960786 | None:intergenic | 30.0% | |
| !! | ATACTTCACGATAACTTGTT+TGG | + | chr6_2:53961026-53961045 | Msa0920180:intron | 30.0% |
| ATGCACCAAAATCAACTAAT+TGG | + | chr6_2:53961222-53961241 | Msa0920180:intron | 30.0% | |
| ACTTAACTCACATGTATACA+AGG | + | chr6_2:53961278-53961297 | Msa0920180:intron | 30.0% | |
| CTTAACTCACATGTATACAA+GGG | + | chr6_2:53961279-53961298 | Msa0920180:intron | 30.0% | |
| TGTATACAAGGGTGATTTAT+AGG | + | chr6_2:53961290-53961309 | Msa0920180:intron | 30.0% | |
| TACAAGACATAAGACTTTCA+AGG | + | chr6_2:53961834-53961853 | Msa0920180:intron | 30.0% | |
| AATATAGAAACTAACGGAAG+TGG | + | chr6_2:53961964-53961983 | Msa0920180:intron | 30.0% | |
| ! | GCTTTTGTTCATTGAATTGA+TGG | + | chr6_2:53962018-53962037 | Msa0920180:intron | 30.0% |
| ! | ACCCCTTACACCAAAATTTT+AGG | + | chr6_2:53954922-53954941 | Msa0920180:CDS | 35.0% |
| AGTAAGGTAACTCTGTTCTT+CGG | + | chr6_2:53955128-53955147 | Msa0920180:intron | 35.0% | |
| AAAGTTCTGTGATAACCTGT+TGG | + | chr6_2:53955164-53955183 | Msa0920180:intron | 35.0% | |
| !! | CTTATATTTGGCTTTCCATG+AGG | - | chr6_2:53955364-53955383 | None:intergenic | 35.0% |
| TATAGCTTAGATCACCGTAA+AGG | + | chr6_2:53955503-53955522 | Msa0920180:intron | 35.0% | |
| ! | CCTATTTAACTTAAAAGGCC+AGG | - | chr6_2:53955649-53955668 | None:intergenic | 35.0% |
| !!! | CCTGGCCTTTTAAGTTAAAT+AGG | + | chr6_2:53955646-53955665 | Msa0920180:intron | 35.0% |
| CTATTAATAGGGATGGGAAT+AGG | - | chr6_2:53955769-53955788 | None:intergenic | 35.0% | |
| CTATTCCCATCCCTATTAAT+AGG | + | chr6_2:53955767-53955786 | Msa0920180:intron | 35.0% | |
| CATTCCCTATTAATAGGGAT+GGG | - | chr6_2:53955775-53955794 | None:intergenic | 35.0% | |
| ACATTCCCTATTAATAGGGA+TGG | - | chr6_2:53955776-53955795 | None:intergenic | 35.0% | |
| TATACAACATGAAGTGCAGA+AGG | - | chr6_2:53956008-53956027 | None:intergenic | 35.0% | |
| GTTCAAATTCTCCTACACTA+TGG | + | chr6_2:53956129-53956148 | Msa0920180:intron | 35.0% | |
| TAACCCCTATTTGACAACAT+TGG | + | chr6_2:53956166-53956185 | Msa0920180:intron | 35.0% | |
| AGACCAATGTTGTCAAATAG+GGG | - | chr6_2:53956172-53956191 | None:intergenic | 35.0% | |
| GAGACCAATGTTGTCAAATA+GGG | - | chr6_2:53956173-53956192 | None:intergenic | 35.0% | |
| ACCAAGGTCACATAAAAGAA+CGG | - | chr6_2:53956207-53956226 | None:intergenic | 35.0% | |
| ! | CTTTTATGTGACCTTGGTTT+AGG | + | chr6_2:53956209-53956228 | Msa0920180:intron | 35.0% |
| !! | CTGGTTCTTTTTCTTTAGTC+TGG | - | chr6_2:53956263-53956282 | None:intergenic | 35.0% |
| AAGAAAAAGAACCAGCAGAA+TGG | + | chr6_2:53956268-53956287 | Msa0920180:CDS | 35.0% | |
| AGAAAAAGAACCAGCAGAAT+GGG | + | chr6_2:53956269-53956288 | Msa0920180:CDS | 35.0% | |
| AAAAATTACGTTTGCACCCT+GGG | - | chr6_2:53956352-53956371 | None:intergenic | 35.0% | |
| AAAAAATTACGTTTGCACCC+TGG | - | chr6_2:53956353-53956372 | None:intergenic | 35.0% | |
| !!! | AGGGTGCAAACGTAATTTTT+TGG | + | chr6_2:53956352-53956371 | Msa0920180:intron | 35.0% |
| TCTGCGAAGTTAGATTTGTA+GGG | - | chr6_2:53956464-53956483 | None:intergenic | 35.0% | |
| TTCTGCGAAGTTAGATTTGT+AGG | - | chr6_2:53956465-53956484 | None:intergenic | 35.0% | |
| GCAAAACAAAGAACTCATCT+AGG | - | chr6_2:53956638-53956657 | None:intergenic | 35.0% | |
| GCTAAATGTTGCCAGATTTA+CGG | - | chr6_2:53956818-53956837 | None:intergenic | 35.0% | |
| AAATCTGGCAACATTTAGCT+TGG | + | chr6_2:53956819-53956838 | Msa0920180:intron | 35.0% | |
| ! | AATCTGGCAACATTTAGCTT+GGG | + | chr6_2:53956820-53956839 | Msa0920180:intron | 35.0% |
| !! | GATATGTTGTTCGGTTTTGA+CGG | + | chr6_2:53956849-53956868 | Msa0920180:intron | 35.0% |
| ! | TTTTTAACCTGCTGGAAATG+GGG | - | chr6_2:53957022-53957041 | None:intergenic | 35.0% |
| ! | CTTTTTAACCTGCTGGAAAT+GGG | - | chr6_2:53957023-53957042 | None:intergenic | 35.0% |
| ! | TCTTTTTAACCTGCTGGAAA+TGG | - | chr6_2:53957024-53957043 | None:intergenic | 35.0% |
| ! | TGTGTATCTTTTTAACCTGC+TGG | - | chr6_2:53957030-53957049 | None:intergenic | 35.0% |
| ! | AAGGAAACTTTTAGTAGCAG+AGG | - | chr6_2:53957170-53957189 | None:intergenic | 35.0% |
| ! | CAGTTGAAGAAAGGTATATG+AGG | + | chr6_2:53957341-53957360 | Msa0920180:intron | 35.0% |
| AACTAGCTCAACAACAACTA+AGG | - | chr6_2:53957405-53957424 | None:intergenic | 35.0% | |
| ! | GTTGTTGAGCTAGTTTAATG+CGG | + | chr6_2:53957410-53957429 | Msa0920180:intron | 35.0% |
| ! | TTGTTGAGCTAGTTTAATGC+GGG | + | chr6_2:53957411-53957430 | Msa0920180:intron | 35.0% |
| AAAATGGACAAGCAGAATGA+AGG | - | chr6_2:53957535-53957554 | None:intergenic | 35.0% | |
| GTAATGTCATTGACAACAAC+TGG | - | chr6_2:53957675-53957694 | None:intergenic | 35.0% | |
| GTCAATGACATTACATGATG+TGG | + | chr6_2:53957681-53957700 | Msa0920180:intron | 35.0% | |
| TGTGCTAGATCTGTTCAAAT+TGG | + | chr6_2:53957727-53957746 | Msa0920180:intron | 35.0% | |
| ! | GGTTGTTTCGACCAAATAAA+AGG | - | chr6_2:53958000-53958019 | None:intergenic | 35.0% |
| CTTGCTCTTATTCAACACTA+TGG | - | chr6_2:53958101-53958120 | None:intergenic | 35.0% | |
| CATCCAAAAAAAGGATGGAT+GGG | - | chr6_2:53958315-53958334 | None:intergenic | 35.0% | |
| ACATCCAAAAAAAGGATGGA+TGG | - | chr6_2:53958316-53958335 | None:intergenic | 35.0% | |
| !!! | ATCCATCCTTTTTTTGGATG+TGG | + | chr6_2:53958315-53958334 | Msa0920180:intron | 35.0% |
| GGATGAATGGGAGAAAATAT+TGG | - | chr6_2:53958533-53958552 | None:intergenic | 35.0% | |
| TCTCTGCAAATCGAAAAAGA+AGG | - | chr6_2:53958421-53958440 | None:intergenic | 35.0% | |
| TTGCAGAGATCATGAATTTG+GGG | + | chr6_2:53958432-53958451 | Msa0920180:intron | 35.0% | |
| TTGCAGAGATCATGAATTTG+GGG | - | chr6_2:53958432-53958451 | None:intergenic | 35.0% | |
| TCTCTGCAAATCGTAAAAGA+AGG | + | chr6_2:53958512-53958531 | Msa0920180:intron | 35.0% | |
| GGATGAATGGGAGAAAATAT+TGG | + | chr6_2:53958533-53958552 | Msa0920180:intron | 35.0% | |
| !! | AAAATATAGAGCATCGTGGT+TGG | - | chr6_2:53958859-53958878 | None:intergenic | 35.0% |
| TTGTACACACAACCTTTCTT+CGG | + | chr6_2:53958892-53958911 | Msa0920180:intron | 35.0% | |
| ATACTTGACTTCTTTGTCTG+CGG | + | chr6_2:53959279-53959298 | Msa0920180:intron | 35.0% | |
| CTGCACGAGAGAAATAAAAT+TGG | + | chr6_2:53959353-53959372 | Msa0920180:intron | 35.0% | |
| TTAGTTAACTTCTCCAGAAG+TGG | - | chr6_2:53959403-53959422 | None:intergenic | 35.0% | |
| !!! | AAACTTTTTCATGGAGGTTG+TGG | + | chr6_2:53959580-53959599 | Msa0920180:intron | 35.0% |
| !!! | AACTTTTTCATGGAGGTTGT+GGG | + | chr6_2:53959581-53959600 | Msa0920180:intron | 35.0% |
| GTTGTGGGAATAGATTATTG+AGG | + | chr6_2:53959596-53959615 | Msa0920180:intron | 35.0% | |
| AATACAGATCTTGGTATGTG+AGG | - | chr6_2:53959763-53959782 | None:intergenic | 35.0% | |
| ATCAGAGAGTTGTACTAGAA+AGG | + | chr6_2:53960018-53960037 | Msa0920180:CDS | 35.0% | |
| TAGAAAGGTAACTCGTTGTT+CGG | + | chr6_2:53960033-53960052 | Msa0920180:intron | 35.0% | |
| ATTTACAGTTTGCATGATGC+AGG | + | chr6_2:53960310-53960329 | Msa0920180:intron | 35.0% | |
| !!! | ATAGTTTTGGTGTGATCTTG+TGG | + | chr6_2:53960343-53960362 | Msa0920180:CDS | 35.0% |
| !!! | TAGTTTTGGTGTGATCTTGT+GGG | + | chr6_2:53960344-53960363 | Msa0920180:CDS | 35.0% |
| !! | TAGCAAGATAGATGGATTGT+AGG | + | chr6_2:53960619-53960638 | Msa0920180:intron | 35.0% |
| AATGCCCTTATCAAGATAGA+TGG | + | chr6_2:53960682-53960701 | Msa0920180:intron | 35.0% | |
| AAAAATGACCTTCAATCGTG+TGG | - | chr6_2:53960853-53960872 | None:intergenic | 35.0% | |
| AAAGAGACTTGCAGAAAGTT+TGG | - | chr6_2:53960927-53960946 | None:intergenic | 35.0% | |
| AAGTCTCTTTAACTCAGTTC+AGG | + | chr6_2:53960937-53960956 | Msa0920180:intron | 35.0% | |
| AGTCTCTTTAACTCAGTTCA+GGG | + | chr6_2:53960938-53960957 | Msa0920180:intron | 35.0% | |
| TGCAAATAAGGGAGAGAAAA+AGG | - | chr6_2:53960966-53960985 | None:intergenic | 35.0% | |
| ATGTAAATTACTGACCCCAA+CGG | + | chr6_2:53961253-53961272 | Msa0920180:intron | 35.0% | |
| ATGTGAGTTAAGTAACCGTT+GGG | - | chr6_2:53961271-53961290 | None:intergenic | 35.0% | |
| !!! | ATATTTTAGTTGTGTAGCCC+AGG | + | chr6_2:53961691-53961710 | Msa0920180:intron | 35.0% |
| !!! | TATTTTAGTTGTGTAGCCCA+GGG | + | chr6_2:53961692-53961711 | Msa0920180:intron | 35.0% |
| TTCAAAACATGGATATCCCT+GGG | - | chr6_2:53961711-53961730 | None:intergenic | 35.0% | |
| GACATAAGACTTTCAAGGTA+TGG | + | chr6_2:53961839-53961858 | Msa0920180:intron | 35.0% | |
| AGCAACATGACTCTTAGATA+TGG | - | chr6_2:53962001-53962020 | None:intergenic | 35.0% | |
| ! | TAATCCTCCAGTAGATTTTG+TGG | + | chr6_2:53962075-53962094 | Msa0920180:intron | 35.0% |
| TTTAGGTACCAAAGAAGACG+TGG | + | chr6_2:53954939-53954958 | Msa0920180:CDS | 40.0% | |
| ! | ATCAGAGTCTTGTGCTAGTA+AGG | + | chr6_2:53955112-53955131 | Msa0920180:CDS | 40.0% |
| TTCACGTTCCTTAAGACTTC+TGG | - | chr6_2:53955305-53955324 | None:intergenic | 40.0% | |
| TTATGCATGTGTATGCCTCA+TGG | + | chr6_2:53955346-53955365 | Msa0920180:intron | 40.0% | |
| ! | TTTTTGAATGGCCTATGACC+TGG | + | chr6_2:53955628-53955647 | Msa0920180:intron | 40.0% |
| AACTTAAAAGGCCAGGTCAT+AGG | - | chr6_2:53955642-53955661 | None:intergenic | 40.0% | |
| AAAAAAAGCCTAACCTAGCC+TGG | + | chr6_2:53955701-53955720 | Msa0920180:intron | 40.0% | |
| GAATGAGATCTGAGAAGGAT+GGG | - | chr6_2:53955933-53955952 | None:intergenic | 40.0% | |
| CAGTGCTATATCGCTACTAT+AGG | + | chr6_2:53956084-53956103 | Msa0920180:intron | 40.0% | |
| TGCTATATCGCTACTATAGG+CGG | + | chr6_2:53956087-53956106 | Msa0920180:intron | 40.0% | |
| CGAGACCAATGTTGTCAAAT+AGG | - | chr6_2:53956174-53956193 | None:intergenic | 40.0% | |
| ! | ACCGTTCTTTTATGTGACCT+TGG | + | chr6_2:53956203-53956222 | Msa0920180:intron | 40.0% |
| ATTGTGGTAAGTGTATTCCC+AGG | + | chr6_2:53956332-53956351 | Msa0920180:CDS | 40.0% | |
| TTGTGGTAAGTGTATTCCCA+GGG | + | chr6_2:53956333-53956352 | Msa0920180:CDS | 40.0% | |
| TGAGAAGACTTACATTGCCA+TGG | - | chr6_2:53956534-53956553 | None:intergenic | 40.0% | |
| TCCACACATTACCGTAAATC+TGG | + | chr6_2:53956804-53956823 | Msa0920180:intron | 40.0% | |
| GGGAAAGGTGATATGTTGTT+CGG | + | chr6_2:53956840-53956859 | Msa0920180:intron | 40.0% | |
| ! | TTTTAACCTGCTGGAAATGG+GGG | - | chr6_2:53957021-53957040 | None:intergenic | 40.0% |
| ACTTCTAATACCTGTCTCCA+TGG | + | chr6_2:53957583-53957602 | Msa0920180:CDS | 40.0% | |
| CTTCTAATACCTGTCTCCAT+GGG | + | chr6_2:53957584-53957603 | Msa0920180:CDS | 40.0% | |
| ! | AGTGAGCGTACCCTTTTATT+TGG | + | chr6_2:53957986-53958005 | Msa0920180:intron | 40.0% |
| !!! | TAGCCCATCCATCCTTTTTT+TGG | + | chr6_2:53958309-53958328 | Msa0920180:intron | 40.0% |
| ATCTCGCCACATCCAAAAAA+AGG | - | chr6_2:53958324-53958343 | None:intergenic | 40.0% | |
| ATGTGGCGAGATCATGAATT+TGG | + | chr6_2:53958332-53958351 | Msa0920180:intron | 40.0% | |
| TGTGGCGAGATCATGAATTT+GGG | + | chr6_2:53958333-53958352 | Msa0920180:intron | 40.0% | |
| !! | TAGGGAGTATTCGCATTCAA+AGG | - | chr6_2:53958719-53958738 | None:intergenic | 40.0% |
| GTCAAAACAACCTGATGAGT+TGG | - | chr6_2:53958923-53958942 | None:intergenic | 40.0% | |
| ! | AGTGAGCGTACCCTTTTATT+TGG | - | chr6_2:53957986-53958005 | None:intergenic | 40.0% |
| TGAACTGTCTCGTACATAGT+GGG | - | chr6_2:53959833-53959852 | None:intergenic | 40.0% | |
| ! | TATTTTTCATACAGCGTGGG+TGG | + | chr6_2:53960178-53960197 | Msa0920180:intron | 40.0% |
| ! | ATTTTTCATACAGCGTGGGT+GGG | + | chr6_2:53960179-53960198 | Msa0920180:intron | 40.0% |
| TTCTCGTTCCTTAAGACTTC+TGG | - | chr6_2:53960216-53960235 | None:intergenic | 40.0% | |
| !! | CTTATATCTGGCTTTCCATG+AGG | - | chr6_2:53960275-53960294 | None:intergenic | 40.0% |
| GTCTCTTTAACTCAGTTCAG+GGG | + | chr6_2:53960939-53960958 | Msa0920180:intron | 40.0% | |
| TCTCTTTAACTCAGTTCAGG+GGG | + | chr6_2:53960940-53960959 | Msa0920180:intron | 40.0% | |
| TGTGAGTTAAGTAACCGTTG+GGG | - | chr6_2:53961270-53961289 | None:intergenic | 40.0% | |
| CATGTGAGTTAAGTAACCGT+TGG | - | chr6_2:53961272-53961291 | None:intergenic | 40.0% | |
| ATGATGCTTTGACAGCAAAG+AGG | - | chr6_2:53961324-53961343 | None:intergenic | 40.0% | |
| ! | TGTCAAAGCATCATCGATGT+GGG | + | chr6_2:53961330-53961349 | Msa0920180:intron | 40.0% |
| GAGCATAACAACAAAGTCGA+CGG | - | chr6_2:53961482-53961501 | None:intergenic | 40.0% | |
| GTTCAAAACATGGATATCCC+TGG | - | chr6_2:53961712-53961731 | None:intergenic | 40.0% | |
| ATAGGAGCCACAAAATCTAC+TGG | - | chr6_2:53962085-53962104 | None:intergenic | 40.0% | |
| AGCATACACCACGTCTTCTT+TGG | - | chr6_2:53954950-53954969 | None:intergenic | 45.0% | |
| AGAAGACGTGGTGTATGCTT+TGG | + | chr6_2:53954951-53954970 | Msa0920180:CDS | 45.0% | |
| GTCGACATAATAGGCCTAAG+AGG | + | chr6_2:53955604-53955623 | Msa0920180:intron | 45.0% | |
| ! | GGCCTAAGAGGCTTTTTGAA+TGG | + | chr6_2:53955616-53955635 | Msa0920180:intron | 45.0% |
| GGCCATTCAAAAAGCCTCTT+AGG | - | chr6_2:53955621-53955640 | None:intergenic | 45.0% | |
| CGAATGAGATCTGAGAAGGA+TGG | - | chr6_2:53955934-53955953 | None:intergenic | 45.0% | |
| ACGACGAATGAGATCTGAGA+AGG | - | chr6_2:53955938-53955957 | None:intergenic | 45.0% | |
| CAGATCTCATTCGTCGTCAT+AGG | + | chr6_2:53955941-53955960 | Msa0920180:CDS | 45.0% | |
| CATTCGTCGTCATAGGCAAT+TGG | + | chr6_2:53955948-53955967 | Msa0920180:CDS | 45.0% | |
| TAGGCGGTATTTGACAACAG+TGG | + | chr6_2:53956103-53956122 | Msa0920180:intron | 45.0% | |
| TGAGAATCGTGTTGGAGTAC+GGG | - | chr6_2:53956236-53956255 | None:intergenic | 45.0% | |
| CTGAGAATCGTGTTGGAGTA+CGG | - | chr6_2:53956237-53956256 | None:intergenic | 45.0% | |
| GTACTCCAACACGATTCTCA+GGG | + | chr6_2:53956236-53956255 | Msa0920180:CDS | 45.0% | |
| AGCAGAATGGGAACTTCGAT+GGG | + | chr6_2:53956281-53956300 | Msa0920180:CDS | 45.0% | |
| ! | CTTCGCAGAACTGTCCTTTT+AGG | + | chr6_2:53956475-53956494 | Msa0920180:intron | 45.0% |
| AGCACGTCATCAGTAGTAGT+TGG | + | chr6_2:53956581-53956600 | Msa0920180:intron | 45.0% | |
| GCCAGATTTACGGTAATGTG+TGG | - | chr6_2:53956808-53956827 | None:intergenic | 45.0% | |
| !! | GGCAACATTTAGCTTGGGAA+AGG | + | chr6_2:53956825-53956844 | Msa0920180:intron | 45.0% |
| TTTGGAGGAGGGGAAAAAAC+TGG | - | chr6_2:53957496-53957515 | None:intergenic | 45.0% | |
| !!! | GTTTTTTCCCCTCCTCCAAA+TGG | + | chr6_2:53957496-53957515 | Msa0920180:intron | 45.0% |
| TAATACCTGTCTCCATGGGT+TGG | + | chr6_2:53957588-53957607 | Msa0920180:CDS | 45.0% | |
| TATACCATGAGACCAACCCA+TGG | - | chr6_2:53957603-53957622 | None:intergenic | 45.0% | |
| TGGCTAGACCAAGATGTCAA+TGG | + | chr6_2:53957701-53957720 | Msa0920180:intron | 45.0% | |
| GCACATCACCATTGACATCT+TGG | - | chr6_2:53957712-53957731 | None:intergenic | 45.0% | |
| GTCGAAACAACCTGATGAGT+TGG | + | chr6_2:53958008-53958027 | Msa0920180:intron | 45.0% | |
| ! | AACAACCTGATGAGTTGGAC+AGG | + | chr6_2:53958013-53958032 | Msa0920180:intron | 45.0% |
| GGCTGTTGTACGTACAACTT+CGG | - | chr6_2:53958039-53958058 | None:intergenic | 45.0% | |
| AGAGAGGATCGTAGGTAGTA+AGG | + | chr6_2:53958072-53958091 | Msa0920180:intron | 45.0% | |
| !! | TAGGGAGTATCCGCATTCAA+AGG | + | chr6_2:53958207-53958226 | Msa0920180:intron | 45.0% |
| CGCCACATCCAAAAAAAGGA+TGG | - | chr6_2:53958320-53958339 | None:intergenic | 45.0% | |
| GTGGCGAGATCATGAATTTG+GGG | + | chr6_2:53958334-53958353 | Msa0920180:intron | 45.0% | |
| ! | AACAACCTGATGAGTTGGAC+AGG | - | chr6_2:53958013-53958032 | None:intergenic | 45.0% |
| TTCCAGACCTCAAAAGGCAA+TGG | - | chr6_2:53959206-53959225 | None:intergenic | 45.0% | |
| GCTAGACCTGGATGTTGTAA+AGG | + | chr6_2:53959248-53959267 | Msa0920180:intron | 45.0% | |
| GTGAACTGTCTCGTACATAG+TGG | - | chr6_2:53959834-53959853 | None:intergenic | 45.0% | |
| TCTCTGATGACAGACATGCA+TGG | - | chr6_2:53960006-53960025 | None:intergenic | 45.0% | |
| TTCTGCATGTGTATGCCTCA+TGG | + | chr6_2:53960257-53960276 | Msa0920180:intron | 45.0% | |
| ! | TAGGTACCGTGAGCAGTTTA+AGG | + | chr6_2:53960398-53960417 | Msa0920180:CDS | 45.0% |
| AGCGATCCTTAAACTGCTCA+CGG | - | chr6_2:53960407-53960426 | None:intergenic | 45.0% | |
| GCTACTGCTAGCAAGATAGA+TGG | + | chr6_2:53960611-53960630 | Msa0920180:intron | 45.0% | |
| ! | GAAGGAAAGCATGGTTTAGC+TGG | - | chr6_2:53960814-53960833 | None:intergenic | 45.0% |
| ATCAGAGAGGAAGGAAAGCA+TGG | - | chr6_2:53960823-53960842 | None:intergenic | 45.0% | |
| TGCTTTCCTTCCTCTCTGAT+AGG | + | chr6_2:53960823-53960842 | Msa0920180:intron | 45.0% | |
| TAGGTGAACCACACGATTGA+AGG | + | chr6_2:53960842-53960861 | Msa0920180:intron | 45.0% | |
| ! | CTGTCAAAGCATCATCGATG+TGG | + | chr6_2:53961329-53961348 | Msa0920180:intron | 45.0% |
| !! | TCGGCTAGTACTCTAGAGTT+TGG | - | chr6_2:53961366-53961385 | None:intergenic | 45.0% |
| TAGCAGAATCAAACTGGGTG+TGG | - | chr6_2:53961404-53961423 | None:intergenic | 45.0% | |
| CAGCGTAGCAGAATCAAACT+GGG | - | chr6_2:53961409-53961428 | None:intergenic | 45.0% | |
| TCAGCGTAGCAGAATCAAAC+TGG | - | chr6_2:53961410-53961429 | None:intergenic | 45.0% | |
| ACAGTACGTCGCAATGACAA+GGG | + | chr6_2:53961870-53961889 | Msa0920180:intron | 45.0% | |
| TTTGTGGCTCCTATCAGTGA+TGG | + | chr6_2:53962091-53962110 | Msa0920180:intron | 45.0% | |
| ! | TCCTATCAGTGATGGAGTTG+TGG | + | chr6_2:53962099-53962118 | Msa0920180:intron | 45.0% |
| !! | TAAATATGATATAATATATA+TGG | - | chr6_2:53955439-53955458 | None:intergenic | 5.0% |
| !! | TATAATTTACTTATTAATAT+AGG | + | chr6_2:53958184-53958203 | Msa0920180:intron | 5.0% |
| !! | TATAATTTACTTATTAATAT+AGG | - | chr6_2:53958184-53958203 | None:intergenic | 5.0% |
| AGACGTGGTGTATGCTTTGG+TGG | + | chr6_2:53954954-53954973 | Msa0920180:CDS | 50.0% | |
| ACTCTGATGACAGACGTGCA+TGG | - | chr6_2:53955100-53955119 | None:intergenic | 50.0% | |
| ! | GGCAATTGGCTTCCCTGTAA+TGG | + | chr6_2:53955962-53955981 | Msa0920180:intron | 50.0% |
| CGTACTCCAACACGATTCTC+AGG | + | chr6_2:53956235-53956254 | Msa0920180:CDS | 50.0% | |
| CATCGAAGTTCCCATTCTGC+TGG | - | chr6_2:53956282-53956301 | None:intergenic | 50.0% | |
| CAGCAGAATGGGAACTTCGA+TGG | + | chr6_2:53956280-53956299 | Msa0920180:CDS | 50.0% | |
| AGAATGGGAACTTCGATGGG+AGG | + | chr6_2:53956284-53956303 | Msa0920180:CDS | 50.0% | |
| ATGGCTCAACTCGACAACTC+TGG | + | chr6_2:53957268-53957287 | Msa0920180:intron | 50.0% | |
| TAGGAGACCATTTGGAGGAG+GGG | - | chr6_2:53957506-53957525 | None:intergenic | 50.0% | |
| CTAGGAGACCATTTGGAGGA+GGG | - | chr6_2:53957507-53957526 | None:intergenic | 50.0% | |
| CATCCTAGGAGACCATTTGG+AGG | - | chr6_2:53957511-53957530 | None:intergenic | 50.0% | |
| CTCCAAATGGTCTCCTAGGA+TGG | + | chr6_2:53957509-53957528 | Msa0920180:intron | 50.0% | |
| AGCAGAATGAAGGCCATCCT+AGG | - | chr6_2:53957525-53957544 | None:intergenic | 50.0% | |
| TATAGCCTCGAGTTCAGCGT+AGG | + | chr6_2:53957952-53957971 | Msa0920180:intron | 50.0% | |
| CATAGCGTCAAGTTCAGCGT+GGG | - | chr6_2:53958979-53958998 | None:intergenic | 50.0% | |
| ACATAGCGTCAAGTTCAGCG+TGG | - | chr6_2:53958980-53958999 | None:intergenic | 50.0% | |
| GGTATAAACCCCACATGCGA+AGG | + | chr6_2:53959082-53959101 | Msa0920180:intron | 50.0% | |
| ! | TCCTCGACCATTGCCTTTTG+AGG | + | chr6_2:53959196-53959215 | Msa0920180:intron | 50.0% |
| ACCTCAAAAGGCAATGGTCG+AGG | - | chr6_2:53959200-53959219 | None:intergenic | 50.0% | |
| !!! | GACCATTGCCTTTTGAGGTC+TGG | + | chr6_2:53959201-53959220 | Msa0920180:intron | 50.0% |
| ! | GGATGGTGCCAGAAGTCTTA+AGG | + | chr6_2:53960205-53960224 | Msa0920180:CDS | 50.0% |
| TAACTACCACGCAAACCCCA+TGG | + | chr6_2:53960370-53960389 | Msa0920180:CDS | 50.0% | |
| GTGAGCAGTTTAAGGATCGC+TGG | + | chr6_2:53960406-53960425 | Msa0920180:CDS | 50.0% | |
| GGTTCACCTATCAGAGAGGA+AGG | - | chr6_2:53960832-53960851 | None:intergenic | 50.0% | |
| GTGTGGTTCACCTATCAGAG+AGG | - | chr6_2:53960836-53960855 | None:intergenic | 50.0% | |
| GCTACGCTGAATCGTCGTTA+CGG | + | chr6_2:53961420-53961439 | Msa0920180:intron | 50.0% | |
| ACAAAGTCGACGGATAGAGC+CGG | - | chr6_2:53961472-53961491 | None:intergenic | 50.0% | |
| CACAGTACGTCGCAATGACA+AGG | + | chr6_2:53961869-53961888 | Msa0920180:intron | 50.0% | |
| GGAGCCACAAAATCTACTGG+AGG | - | chr6_2:53962082-53962101 | None:intergenic | 50.0% | |
| GCCACAACTCCATCACTGAT+AGG | - | chr6_2:53962103-53962122 | None:intergenic | 50.0% | |
| GGATGGCGCCAGAAGTCTTA+AGG | + | chr6_2:53955294-53955313 | Msa0920180:CDS | 55.0% | |
| GCTAGGCCGTAGGCATTTGT+AGG | + | chr6_2:53955734-53955753 | Msa0920180:intron | 55.0% | |
| GACCGGCCTACAAATGCCTA+CGG | - | chr6_2:53955743-53955762 | None:intergenic | 55.0% | |
| GGGATGGGAATAGGTCAGAC+CGG | - | chr6_2:53955760-53955779 | None:intergenic | 55.0% | |
| GGAGTACGGGACCTAAACCA+AGG | - | chr6_2:53956223-53956242 | None:intergenic | 55.0% | |
| CTGGACCCTGAGAATCGTGT+TGG | - | chr6_2:53956244-53956263 | None:intergenic | 55.0% | |
| ! | TACCGTGCTGTTGATCGCCA+TGG | + | chr6_2:53956514-53956533 | Msa0920180:CDS | 55.0% |
| TGCCATGGCGATCAACAGCA+CGG | - | chr6_2:53956519-53956538 | None:intergenic | 55.0% | |
| !! | GTTCGGTTTTGACGGACGTG+TGG | + | chr6_2:53956857-53956876 | Msa0920180:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr6_2:53957427-53957446 | Msa0920180:intron | 55.0% |
| CCTAGGAGACCATTTGGAGG+AGG | - | chr6_2:53957508-53957527 | None:intergenic | 55.0% | |
| CCTCCTCCAAATGGTCTCCT+AGG | + | chr6_2:53957505-53957524 | Msa0920180:intron | 55.0% | |
| GGCCATCCTAGGAGACCATT+TGG | - | chr6_2:53957514-53957533 | None:intergenic | 55.0% | |
| TGAGACCAACCCATGGAGAC+AGG | - | chr6_2:53957596-53957615 | None:intergenic | 55.0% | |
| !! | GTCTCCATGGGTTGGTCTCA+TGG | + | chr6_2:53957596-53957615 | Msa0920180:CDS | 55.0% |
| GGTATAAACCCCACACGCGA+AGG | - | chr6_2:53957849-53957868 | None:intergenic | 55.0% | |
| CTTTGCCTACGCTGAACTCG+AGG | - | chr6_2:53957960-53957979 | None:intergenic | 55.0% | |
| CTCGAGTTCAGCGTAGGCAA+AGG | + | chr6_2:53957958-53957977 | Msa0920180:intron | 55.0% | |
| TTCGGCCTGTCCAACTCATC+AGG | - | chr6_2:53958910-53958929 | None:intergenic | 55.0% | |
| GAGTTGGACAGGCCGAAGAA+AGG | - | chr6_2:53958907-53958926 | None:intergenic | 55.0% | |
| TTCGGCCTGTCCAACTCATC+AGG | + | chr6_2:53958910-53958929 | Msa0920180:intron | 55.0% | |
| GTCAAGTTCAGCGTGGGCAA+AGG | - | chr6_2:53958973-53958992 | None:intergenic | 55.0% | |
| !! | ACCCAACCATCAGGCATTGG+CGG | - | chr6_2:53959055-53959074 | None:intergenic | 55.0% |
| GAAGAGGATGTGGCTAGACC+TGG | + | chr6_2:53959236-53959255 | Msa0920180:intron | 55.0% | |
| ACGGTACCTACCACACCATG+GGG | - | chr6_2:53960388-53960407 | None:intergenic | 55.0% | |
| CACGGTACCTACCACACCAT+GGG | - | chr6_2:53960389-53960408 | None:intergenic | 55.0% | |
| TCACGGTACCTACCACACCA+TGG | - | chr6_2:53960390-53960409 | None:intergenic | 55.0% | |
| CTTCGTCGTTGTCTCAACCC+CGG | + | chr6_2:53961450-53961469 | Msa0920180:intron | 55.0% | |
| AAAGTCGACGGATAGAGCCG+GGG | - | chr6_2:53961470-53961489 | None:intergenic | 55.0% | |
| CAAAGTCGACGGATAGAGCC+GGG | - | chr6_2:53961471-53961490 | None:intergenic | 55.0% | |
| GCGATCAACAGAGCAGTTGC+TGG | + | chr6_2:53962121-53962140 | Msa0920180:CDS | 55.0% | |
| ! | AACAGAGCAGTTGCTGGCTG+CGG | + | chr6_2:53962127-53962146 | Msa0920180:CDS | 55.0% |
| ACGACAGGCCAGGCTAGGTT+AGG | - | chr6_2:53955712-53955731 | None:intergenic | 60.0% | |
| AACCTAGCCTGGCCTGTCGT+AGG | + | chr6_2:53955712-53955731 | Msa0920180:intron | 60.0% | |
| GGCCGTAGGCATTTGTAGGC+CGG | + | chr6_2:53955738-53955757 | Msa0920180:intron | 60.0% | |
| CGTGCGCAGAGCCATAGTGT+AGG | - | chr6_2:53956143-53956162 | None:intergenic | 60.0% | |
| !! | CGGTTTTGACGGACGTGTGG+CGG | + | chr6_2:53956860-53956879 | Msa0920180:intron | 60.0% |
| TGCTGACCCCCATTTCCAGC+AGG | + | chr6_2:53957012-53957031 | Msa0920180:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr6_2:53957428-53957447 | Msa0920180:intron | 60.0% |
| !! | CACACGCGAAGGTATCTCGG+GGG | - | chr6_2:53957838-53957857 | None:intergenic | 60.0% |
| !! | CCACACGCGAAGGTATCTCG+GGG | - | chr6_2:53957839-53957858 | None:intergenic | 60.0% |
| !! | CCCACACGCGAAGGTATCTC+GGG | - | chr6_2:53957840-53957859 | None:intergenic | 60.0% |
| CCCGAGATACCTTCGCGTGT+GGG | + | chr6_2:53957837-53957856 | Msa0920180:CDS | 60.0% | |
| !! | CCCCACACGCGAAGGTATCT+CGG | - | chr6_2:53957841-53957860 | None:intergenic | 60.0% |
| CCGAGATACCTTCGCGTGTG+GGG | + | chr6_2:53957838-53957857 | Msa0920180:CDS | 60.0% | |
| CCTAATGGCTGGGTCGCATG+TGG | - | chr6_2:53957870-53957889 | None:intergenic | 60.0% | |
| CCACATGCGACCCAGCCATT+AGG | + | chr6_2:53957867-53957886 | Msa0920180:CDS | 60.0% | |
| !! | ACCCAGCCATTAGGCGTTGG+CGG | + | chr6_2:53957876-53957895 | Msa0920180:CDS | 60.0% |
| ! | CCTCTCTGCGCTTTTCCGAG+TGG | - | chr6_2:53957905-53957924 | None:intergenic | 60.0% |
| ! | CCACTCGGAAAAGCGCAGAG+AGG | + | chr6_2:53957902-53957921 | Msa0920180:CDS | 60.0% |
| ! | TCGGAAAAGCGCAGAGAGGC+TGG | + | chr6_2:53957906-53957925 | Msa0920180:CDS | 60.0% |
| GCGCTCGGAAAAGCAGAGAG+AGG | - | chr6_2:53959029-53959048 | None:intergenic | 60.0% | |
| !! | AACCATCAGGCATTGGCGGG+GGG | - | chr6_2:53959051-53959070 | None:intergenic | 60.0% |
| !! | CAACCATCAGGCATTGGCGG+GGG | - | chr6_2:53959052-53959071 | None:intergenic | 60.0% |
| !! | CCAACCATCAGGCATTGGCG+GGG | - | chr6_2:53959053-53959072 | None:intergenic | 60.0% |
| !! | CCCAACCATCAGGCATTGGC+GGG | - | chr6_2:53959054-53959073 | None:intergenic | 60.0% |
| CCCGCCAATGCCTGATGGTT+GGG | + | chr6_2:53959051-53959070 | Msa0920180:intron | 60.0% | |
| GCGACCCAACCATCAGGCAT+TGG | - | chr6_2:53959058-53959077 | None:intergenic | 60.0% | |
| CCGAGATGCCTTCGCATGTG+GGG | - | chr6_2:53959093-53959112 | None:intergenic | 60.0% | |
| !! | CCCCACATGCGAAGGCATCT+CGG | + | chr6_2:53959090-53959109 | Msa0920180:intron | 60.0% |
| CCCGAGATGCCTTCGCATGT+GGG | - | chr6_2:53959094-53959113 | None:intergenic | 60.0% | |
| !! | CCCACATGCGAAGGCATCTC+GGG | + | chr6_2:53959091-53959110 | Msa0920180:intron | 60.0% |
| !! | CCACATGCGAAGGCATCTCG+GGG | + | chr6_2:53959092-53959111 | Msa0920180:intron | 60.0% |
| !! | CACATGCGAAGGCATCTCGG+GGG | + | chr6_2:53959093-53959112 | Msa0920180:intron | 60.0% |
| ACCACGCAAACCCCATGGTG+TGG | + | chr6_2:53960375-53960394 | Msa0920180:CDS | 60.0% | |
| ACCACACCATGGGGTTTGCG+TGG | - | chr6_2:53960379-53960398 | None:intergenic | 60.0% | |
| CGCAAACCCCATGGTGTGGT+AGG | + | chr6_2:53960379-53960398 | Msa0920180:CDS | 60.0% | |
| !! | GTGGTCTTGTGCGCGCAACT+CGG | - | chr6_2:53961385-53961404 | None:intergenic | 60.0% |
| AGCCTACGACAGGCCAGGCT+AGG | - | chr6_2:53955717-53955736 | None:intergenic | 65.0% | |
| AGCCTGGCCTGTCGTAGGCT+AGG | + | chr6_2:53955717-53955736 | Msa0920180:intron | 65.0% | |
| CCTACGGCCTAGCCTACGAC+AGG | - | chr6_2:53955727-53955746 | None:intergenic | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | + | chr6_2:53955724-53955743 | Msa0920180:intron | 65.0% | |
| GAGAAGGATGGGCGCGTCTG+TGG | - | chr6_2:53955922-53955941 | None:intergenic | 65.0% | |
| CCCCGAGATACCTTCGCGTG+TGG | + | chr6_2:53957836-53957855 | Msa0920180:CDS | 65.0% | |
| GCGACCCAGCCATTAGGCGT+TGG | + | chr6_2:53957873-53957892 | Msa0920180:CDS | 65.0% | |
| CCCGCCAACGCCTAATGGCT+GGG | - | chr6_2:53957880-53957899 | None:intergenic | 65.0% | |
| !! | CCCAGCCATTAGGCGTTGGC+GGG | + | chr6_2:53957877-53957896 | Msa0920180:CDS | 65.0% |
| !! | CCAGCCATTAGGCGTTGGCG+GGG | + | chr6_2:53957878-53957897 | Msa0920180:CDS | 65.0% |
| !! | CAGCCATTAGGCGTTGGCGG+GGG | + | chr6_2:53957879-53957898 | Msa0920180:CDS | 65.0% |
| CCCCGCCAATGCCTGATGGT+TGG | + | chr6_2:53959050-53959069 | Msa0920180:intron | 65.0% | |
| TGCCTGATGGTTGGGTCGCG+TGG | + | chr6_2:53959059-53959078 | Msa0920180:intron | 65.0% | |
| GCCTGATGGTTGGGTCGCGT+GGG | + | chr6_2:53959060-53959079 | Msa0920180:intron | 65.0% | |
| CCTGATGGTTGGGTCGCGTG+GGG | + | chr6_2:53959061-53959080 | Msa0920180:intron | 65.0% | |
| CCCCGAGATGCCTTCGCATG+TGG | - | chr6_2:53959095-53959114 | None:intergenic | 65.0% | |
| TCATACAGCGTGGGTGGGCG+TGG | + | chr6_2:53960184-53960203 | Msa0920180:intron | 65.0% | |
| ! | AGAGCAGTTGCTGGCTGCGG+TGG | + | chr6_2:53962130-53962149 | Msa0920180:CDS | 65.0% |
| GGCCTAGCCTACGACAGGCC+AGG | - | chr6_2:53955722-53955741 | None:intergenic | 70.0% | |
| CCCCGCCAACGCCTAATGGC+TGG | - | chr6_2:53957881-53957900 | None:intergenic | 70.0% | |
| TGGCCCCCGCCAACGCCTAA+TGG | - | chr6_2:53957885-53957904 | None:intergenic | 70.0% | |
| CCCCACGCGACCCAACCATC+AGG | - | chr6_2:53959064-53959083 | None:intergenic | 70.0% | |
| ACAGCGTGGGTGGGCGTGGA+TGG | + | chr6_2:53960188-53960207 | Msa0920180:intron | 70.0% | |
| !! | AGGCGTTGGCGGGGGCCACT+CGG | + | chr6_2:53957887-53957906 | Msa0920180:CDS | 75.0% |
| !! | AGGCATTGGCGGGGGGCGCT+CGG | - | chr6_2:53959044-53959063 | None:intergenic | 75.0% |
| CGCCCCCCGCCAATGCCTGA+TGG | + | chr6_2:53959046-53959065 | Msa0920180:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 53954877 | 53962171 | 53954877 | ID=Msa0920180;Name=Msa0920180 |
| chr6_2 | mRNA | 53954877 | 53962171 | 53954877 | ID=Msa0920180-mRNA-1;Parent=Msa0920180;Name=Msa0920180-mRNA-1;_AED=0.86;_eAED=0.86;_QI=0|0|0|0.08|1|1|12|0|335 |
| chr6_2 | exon | 53954877 | 53954975 | 53954877 | ID=Msa0920180-mRNA-1:exon:8032;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53955062 | 53955133 | 53955062 | ID=Msa0920180-mRNA-1:exon:8033;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53955287 | 53955336 | 53955287 | ID=Msa0920180-mRNA-1:exon:8034;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53955915 | 53955977 | 53955915 | ID=Msa0920180-mRNA-1:exon:8035;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53956231 | 53956362 | 53956231 | ID=Msa0920180-mRNA-1:exon:8036;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53956483 | 53956540 | 53956483 | ID=Msa0920180-mRNA-1:exon:8037;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53957527 | 53957643 | 53957527 | ID=Msa0920180-mRNA-1:exon:8038;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53957822 | 53957947 | 53957822 | ID=Msa0920180-mRNA-1:exon:8039;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53959971 | 53960039 | 53959971 | ID=Msa0920180-mRNA-1:exon:8040;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53960192 | 53960247 | 53960192 | ID=Msa0920180-mRNA-1:exon:8041;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53960332 | 53960433 | 53960332 | ID=Msa0920180-mRNA-1:exon:8042;Parent=Msa0920180-mRNA-1 |
| chr6_2 | exon | 53962108 | 53962171 | 53962108 | ID=Msa0920180-mRNA-1:exon:8043;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53954877 | 53954975 | 53954877 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53955062 | 53955133 | 53955062 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53955287 | 53955336 | 53955287 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53955915 | 53955977 | 53955915 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53956231 | 53956362 | 53956231 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53956483 | 53956540 | 53956483 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53957527 | 53957643 | 53957527 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53957822 | 53957947 | 53957822 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53959971 | 53960039 | 53959971 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53960192 | 53960247 | 53960192 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53960332 | 53960433 | 53960332 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| chr6_2 | CDS | 53962108 | 53962171 | 53962108 | ID=Msa0920180-mRNA-1:cds;Parent=Msa0920180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
