Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922160 | XP_013452731.1 | 98.103 | 369 | 6 | 1 | 1 | 369 | 1 | 368 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922160 | sp|Q93WJ9|KAN1_ARATH | 53.171 | 205 | 70 | 9 | 183 | 369 | 201 | 397 | 1.05e-45 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0922160 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922160 | MtrunA17_Chr6g0479431 | 98.103 | 369 | 6 | 1 | 1 | 369 | 1 | 368 | 0.0 | 747 |
| Msa0922160 | MtrunA17_Chr3g0109981 | 51.429 | 210 | 79 | 8 | 175 | 368 | 250 | 452 | 1.32e-48 | 170 |
| Msa0922160 | MtrunA17_Chr8g0366281 | 36.132 | 393 | 172 | 16 | 7 | 368 | 8 | 352 | 4.28e-43 | 153 |
| Msa0922160 | MtrunA17_Chr5g0410741 | 76.744 | 86 | 18 | 1 | 183 | 268 | 201 | 284 | 1.50e-36 | 136 |
| Msa0922160 | MtrunA17_Chr1g0154261 | 70.115 | 87 | 23 | 1 | 180 | 266 | 106 | 189 | 3.92e-34 | 127 |
| Msa0922160 | MtrunA17_Chr7g0243081 | 56.627 | 83 | 29 | 1 | 204 | 279 | 72 | 154 | 5.67e-23 | 98.6 |
| Msa0922160 | MtrunA17_Chr1g0162931 | 64.407 | 59 | 21 | 0 | 202 | 260 | 17 | 75 | 1.50e-21 | 93.2 |
| Msa0922160 | MtrunA17_Chr1g0210911 | 51.852 | 81 | 29 | 1 | 179 | 259 | 8 | 78 | 4.61e-21 | 92.8 |
| Msa0922160 | MtrunA17_Chr8g0379121 | 67.241 | 58 | 19 | 0 | 202 | 259 | 110 | 167 | 6.26e-20 | 90.5 |
| Msa0922160 | MtrunA17_Chr2g0320231 | 68.966 | 58 | 18 | 0 | 202 | 259 | 96 | 153 | 6.87e-20 | 90.1 |
| Msa0922160 | MtrunA17_Chr7g0261911 | 57.534 | 73 | 29 | 1 | 204 | 276 | 263 | 333 | 1.87e-18 | 86.7 |
| Msa0922160 | MtrunA17_Chr3g0095611 | 32.704 | 159 | 77 | 4 | 204 | 358 | 20 | 152 | 6.39e-18 | 81.6 |
| Msa0922160 | MtrunA17_Chr2g0288601 | 66.038 | 53 | 18 | 0 | 202 | 254 | 70 | 122 | 8.87e-18 | 79.0 |
| Msa0922160 | MtrunA17_Chr7g0274471 | 56.164 | 73 | 30 | 1 | 204 | 276 | 219 | 289 | 1.19e-17 | 84.0 |
| Msa0922160 | MtrunA17_Chr1g0190301 | 66.071 | 56 | 19 | 0 | 204 | 259 | 176 | 231 | 1.20e-17 | 83.6 |
| Msa0922160 | MtrunA17_Chr5g0409731 | 61.667 | 60 | 23 | 0 | 204 | 263 | 26 | 85 | 2.19e-17 | 81.6 |
| Msa0922160 | MtrunA17_Chr7g0254981 | 57.576 | 66 | 26 | 1 | 205 | 270 | 52 | 115 | 3.91e-17 | 80.9 |
| Msa0922160 | MtrunA17_Chr2g0283951 | 61.290 | 62 | 20 | 1 | 202 | 259 | 88 | 149 | 9.33e-17 | 80.9 |
| Msa0922160 | MtrunA17_Chr1g0175091 | 57.377 | 61 | 26 | 0 | 205 | 265 | 260 | 320 | 1.21e-16 | 80.9 |
| Msa0922160 | MtrunA17_Chr2g0291021 | 60.000 | 65 | 24 | 1 | 205 | 269 | 51 | 113 | 2.73e-16 | 79.0 |
| Msa0922160 | MtrunA17_Chr7g0258551 | 60.000 | 55 | 22 | 0 | 205 | 259 | 214 | 268 | 3.45e-16 | 79.3 |
| Msa0922160 | MtrunA17_Chr2g0290991 | 58.333 | 60 | 25 | 0 | 204 | 263 | 40 | 99 | 5.63e-16 | 77.8 |
| Msa0922160 | MtrunA17_Chr1g0197171 | 58.333 | 60 | 25 | 0 | 204 | 263 | 45 | 104 | 5.92e-16 | 77.4 |
| Msa0922160 | MtrunA17_Chr2g0321461 | 53.125 | 64 | 30 | 0 | 204 | 267 | 46 | 109 | 1.33e-15 | 77.4 |
| Msa0922160 | MtrunA17_Chr8g0356501 | 56.667 | 60 | 26 | 0 | 204 | 263 | 38 | 97 | 1.69e-15 | 77.0 |
| Msa0922160 | MtrunA17_Chr2g0310011 | 56.667 | 60 | 26 | 0 | 204 | 263 | 36 | 95 | 2.03e-15 | 76.6 |
| Msa0922160 | MtrunA17_Chr6g0461641 | 60.377 | 53 | 21 | 0 | 204 | 256 | 43 | 95 | 3.61e-15 | 76.3 |
| Msa0922160 | MtrunA17_Chr5g0417521 | 53.571 | 56 | 26 | 0 | 204 | 259 | 16 | 71 | 5.97e-15 | 75.5 |
| Msa0922160 | MtrunA17_Chr4g0042451 | 39.785 | 93 | 50 | 2 | 204 | 296 | 18 | 104 | 1.37e-14 | 73.9 |
| Msa0922160 | MtrunA17_Chr1g0175081 | 49.180 | 61 | 31 | 0 | 205 | 265 | 24 | 84 | 2.54e-14 | 68.6 |
| Msa0922160 | MtrunA17_Chr1g0175071 | 50.847 | 59 | 29 | 0 | 205 | 263 | 179 | 237 | 8.53e-13 | 68.6 |
| Msa0922160 | MtrunA17_Chr7g0242521 | 55.172 | 58 | 23 | 1 | 205 | 259 | 15 | 72 | 8.71e-13 | 67.4 |
| Msa0922160 | MtrunA17_Chr4g0045361 | 39.623 | 106 | 57 | 2 | 185 | 290 | 261 | 359 | 3.93e-12 | 67.0 |
| Msa0922160 | MtrunA17_Chr4g0062921 | 40.625 | 96 | 54 | 2 | 173 | 268 | 206 | 298 | 9.19e-12 | 66.2 |
| Msa0922160 | MtrunA17_Chr2g0304841 | 39.024 | 82 | 43 | 2 | 202 | 277 | 212 | 292 | 1.62e-11 | 65.9 |
| Msa0922160 | MtrunA17_Chr1g0198601 | 40.741 | 81 | 46 | 1 | 193 | 273 | 201 | 279 | 2.87e-11 | 64.3 |
| Msa0922160 | MtrunA17_Chr5g0402631 | 45.122 | 82 | 43 | 1 | 202 | 283 | 213 | 292 | 4.49e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922160 | AT5G16560.1 | 53.171 | 205 | 70 | 9 | 183 | 369 | 201 | 397 | 1.07e-46 | 164 |
| Msa0922160 | AT1G32240.1 | 45.673 | 208 | 70 | 6 | 186 | 369 | 198 | 386 | 8.46e-39 | 142 |
| Msa0922160 | AT1G32240.2 | 84.337 | 83 | 11 | 2 | 186 | 268 | 198 | 278 | 3.80e-38 | 140 |
| Msa0922160 | AT5G42630.1 | 46.569 | 204 | 92 | 6 | 166 | 369 | 71 | 257 | 5.88e-38 | 137 |
| Msa0922160 | AT5G42630.2 | 68.367 | 98 | 28 | 1 | 166 | 263 | 71 | 165 | 2.32e-36 | 132 |
| Msa0922160 | AT4G17695.1 | 45.143 | 175 | 64 | 5 | 96 | 268 | 85 | 229 | 5.88e-36 | 134 |
| Msa0922160 | AT4G04605.1 | 68.966 | 58 | 18 | 0 | 202 | 259 | 13 | 70 | 1.72e-21 | 92.0 |
| Msa0922160 | AT2G38300.1 | 46.341 | 123 | 51 | 4 | 202 | 312 | 53 | 172 | 3.05e-21 | 94.0 |
| Msa0922160 | AT2G40260.1 | 50.000 | 100 | 31 | 3 | 202 | 301 | 81 | 161 | 3.86e-21 | 94.4 |
| Msa0922160 | AT2G02060.2 | 57.143 | 84 | 23 | 3 | 176 | 256 | 9 | 82 | 1.01e-20 | 90.9 |
| Msa0922160 | AT2G02060.1 | 57.143 | 84 | 23 | 3 | 176 | 256 | 9 | 82 | 1.01e-20 | 90.9 |
| Msa0922160 | AT1G14600.1 | 66.102 | 59 | 20 | 0 | 203 | 261 | 23 | 81 | 7.76e-20 | 88.2 |
| Msa0922160 | AT4G04580.1 | 59.322 | 59 | 24 | 0 | 204 | 262 | 15 | 73 | 3.17e-18 | 81.6 |
| Msa0922160 | AT5G45580.2 | 53.947 | 76 | 28 | 1 | 181 | 256 | 8 | 76 | 3.89e-18 | 84.0 |
| Msa0922160 | AT2G42660.1 | 66.071 | 56 | 19 | 0 | 204 | 259 | 51 | 106 | 4.02e-18 | 83.6 |
| Msa0922160 | AT5G45580.1 | 67.925 | 53 | 17 | 0 | 204 | 256 | 8 | 60 | 4.83e-18 | 83.6 |
| Msa0922160 | AT4G28610.1 | 52.055 | 73 | 35 | 0 | 205 | 277 | 227 | 299 | 3.46e-17 | 82.8 |
| Msa0922160 | AT3G04450.4 | 54.930 | 71 | 30 | 1 | 205 | 275 | 200 | 268 | 6.95e-17 | 82.0 |
| Msa0922160 | AT3G04450.2 | 54.930 | 71 | 30 | 1 | 205 | 275 | 200 | 268 | 6.95e-17 | 82.0 |
| Msa0922160 | AT3G04450.1 | 54.930 | 71 | 30 | 1 | 205 | 275 | 240 | 308 | 8.25e-17 | 82.0 |
| Msa0922160 | AT5G18240.2 | 43.333 | 90 | 49 | 1 | 204 | 291 | 46 | 135 | 1.06e-16 | 81.3 |
| Msa0922160 | AT5G18240.3 | 43.333 | 90 | 49 | 1 | 204 | 291 | 46 | 135 | 1.06e-16 | 81.3 |
| Msa0922160 | AT4G04555.1 | 55.738 | 61 | 27 | 0 | 202 | 262 | 13 | 73 | 1.07e-16 | 75.5 |
| Msa0922160 | AT2G01060.1 | 59.091 | 66 | 25 | 1 | 205 | 270 | 17 | 80 | 1.16e-16 | 79.7 |
| Msa0922160 | AT5G18240.1 | 43.333 | 90 | 49 | 1 | 204 | 291 | 46 | 135 | 1.24e-16 | 81.3 |
| Msa0922160 | AT5G18240.4 | 43.333 | 90 | 49 | 1 | 204 | 291 | 46 | 135 | 1.24e-16 | 81.3 |
| Msa0922160 | AT5G18240.5 | 43.333 | 90 | 49 | 1 | 204 | 291 | 46 | 135 | 1.25e-16 | 81.3 |
| Msa0922160 | AT3G12730.1 | 58.333 | 60 | 25 | 0 | 204 | 263 | 24 | 83 | 2.54e-16 | 77.8 |
| Msa0922160 | AT4G13640.1 | 44.318 | 88 | 47 | 1 | 204 | 291 | 38 | 123 | 2.60e-16 | 79.0 |
| Msa0922160 | AT4G13640.2 | 44.318 | 88 | 47 | 1 | 204 | 291 | 38 | 123 | 2.65e-16 | 79.0 |
| Msa0922160 | AT3G04450.3 | 58.462 | 65 | 25 | 1 | 205 | 269 | 240 | 302 | 3.09e-16 | 79.0 |
| Msa0922160 | AT3G24120.1 | 46.053 | 76 | 41 | 0 | 204 | 279 | 42 | 117 | 5.58e-16 | 78.2 |
| Msa0922160 | AT3G24120.2 | 46.053 | 76 | 41 | 0 | 204 | 279 | 42 | 117 | 5.83e-16 | 78.2 |
| Msa0922160 | AT3G04030.1 | 44.737 | 76 | 42 | 0 | 204 | 279 | 46 | 121 | 7.83e-16 | 78.6 |
| Msa0922160 | AT3G04030.3 | 44.737 | 76 | 42 | 0 | 204 | 279 | 46 | 121 | 8.40e-16 | 78.6 |
| Msa0922160 | AT5G29000.1 | 63.636 | 55 | 20 | 0 | 205 | 259 | 190 | 244 | 1.37e-15 | 77.8 |
| Msa0922160 | AT5G29000.3 | 63.636 | 55 | 20 | 0 | 205 | 259 | 190 | 244 | 1.37e-15 | 77.8 |
| Msa0922160 | AT5G29000.4 | 63.636 | 55 | 20 | 0 | 205 | 259 | 233 | 287 | 1.46e-15 | 77.0 |
| Msa0922160 | AT5G29000.2 | 63.636 | 55 | 20 | 0 | 205 | 259 | 233 | 287 | 1.88e-15 | 77.8 |
| Msa0922160 | AT1G79430.2 | 56.667 | 60 | 26 | 0 | 204 | 263 | 35 | 94 | 2.66e-15 | 76.6 |
| Msa0922160 | AT2G20400.2 | 50.667 | 75 | 37 | 0 | 205 | 279 | 233 | 307 | 3.63e-15 | 76.6 |
| Msa0922160 | AT2G20400.1 | 57.812 | 64 | 27 | 0 | 205 | 268 | 233 | 296 | 8.43e-15 | 75.5 |
| Msa0922160 | AT5G06800.3 | 56.364 | 55 | 24 | 0 | 205 | 259 | 194 | 248 | 1.85e-14 | 73.6 |
| Msa0922160 | AT3G13040.3 | 61.818 | 55 | 21 | 0 | 205 | 259 | 243 | 297 | 4.69e-14 | 73.6 |
| Msa0922160 | AT3G13040.1 | 61.818 | 55 | 21 | 0 | 205 | 259 | 243 | 297 | 4.69e-14 | 73.6 |
| Msa0922160 | AT3G13040.2 | 61.818 | 55 | 21 | 0 | 205 | 259 | 243 | 297 | 4.69e-14 | 73.6 |
| Msa0922160 | AT5G06800.2 | 56.364 | 55 | 24 | 0 | 205 | 259 | 194 | 248 | 6.62e-14 | 72.8 |
| Msa0922160 | AT5G06800.1 | 56.364 | 55 | 24 | 0 | 205 | 259 | 194 | 248 | 7.20e-14 | 72.8 |
| Msa0922160 | AT2G06020.1 | 61.538 | 52 | 20 | 0 | 205 | 256 | 88 | 139 | 7.36e-14 | 72.0 |
| Msa0922160 | AT1G69580.1 | 45.205 | 73 | 37 | 1 | 204 | 273 | 35 | 107 | 1.34e-13 | 71.6 |
| Msa0922160 | AT1G69580.2 | 45.205 | 73 | 37 | 1 | 204 | 273 | 35 | 107 | 1.45e-13 | 71.2 |
| Msa0922160 | AT3G04030.2 | 43.421 | 76 | 42 | 1 | 204 | 279 | 46 | 120 | 2.31e-13 | 71.2 |
| Msa0922160 | AT1G32240.3 | 34.615 | 156 | 61 | 4 | 238 | 369 | 1 | 139 | 7.02e-12 | 63.2 |
| Msa0922160 | AT2G03500.1 | 44.737 | 76 | 38 | 1 | 195 | 270 | 229 | 300 | 9.37e-12 | 66.6 |
Find 63 sgRNAs with CRISPR-Local
Find 621 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTGGAAATTCTGAATT+TGG | 0.093125 | 6_2:+60326135 | Msa0922160:CDS |
| ATTAGCTCCAAAACTGATTT+AGG | 0.195719 | 6_2:-60326659 | None:intergenic |
| GCTACACTTCCAACATTCTA+TGG | 0.201212 | 6_2:+60328633 | Msa0922160:CDS |
| CTCTTATTACTTTGTTGTCT+TGG | 0.256380 | 6_2:-60326189 | None:intergenic |
| AAAACATATACAAAGTTTCT+TGG | 0.265371 | 6_2:-60337053 | None:intergenic |
| AGCTACTCCTAAATCAGTTT+TGG | 0.286064 | 6_2:+60326652 | Msa0922160:CDS |
| TTTGATCATGAGGTTGTGTT+AGG | 0.298913 | 6_2:-60328574 | None:intergenic |
| TTAGTTATTTACATGATTCA+TGG | 0.306061 | 6_2:+60336928 | Msa0922160:three_prime_UTR |
| CTCTCTTCATGAGTCTTTGA+AGG | 0.327842 | 6_2:+60325202 | Msa0922160:five_prime_UTR |
| CCTAAGGTGAACTCCAAGTT+TGG | 0.345023 | 6_2:-60336890 | None:intergenic |
| GAACTAGTCCATCGCATTCT+CGG | 0.354623 | 6_2:-60326225 | None:intergenic |
| GCATCTCTAGATCATGATAT+TGG | 0.355771 | 6_2:+60328611 | Msa0922160:CDS |
| GACAAGCCAGCAGCTTCTTC+AGG | 0.364958 | 6_2:+60327626 | Msa0922160:CDS |
| TATCACCAACTAATAATCTT+TGG | 0.370793 | 6_2:-60337082 | None:intergenic |
| GTGAACTCCAAGTTTGGATT+CGG | 0.373038 | 6_2:-60336884 | None:intergenic |
| GAATCTTTCTCTATTATTGA+AGG | 0.375594 | 6_2:-60325958 | None:intergenic |
| GGAAATTCTGAATTTGGAAA+TGG | 0.377930 | 6_2:+60326141 | Msa0922160:CDS |
| ACATGGACACAAGGTAGTTC+TGG | 0.378399 | 6_2:+60336057 | Msa0922160:CDS |
| CCAAACTTGGAGTTCACCTT+AGG | 0.383764 | 6_2:+60336890 | Msa0922160:CDS |
| TTTCTGAAGCTGAGAGTGTT+TGG | 0.384586 | 6_2:+60325872 | Msa0922160:CDS |
| TCATGTCAAGAGTCATTTAC+AGG | 0.385177 | 6_2:+60326706 | Msa0922160:CDS |
| CAGCAGAAGGTGAATCAGTT+TGG | 0.390273 | 6_2:+60326120 | Msa0922160:CDS |
| GAAATTTGAAGTGAAAGATC+AGG | 0.390677 | 6_2:-60325634 | None:intergenic |
| ATATATATAAATAGCTAGTT+AGG | 0.390991 | 6_2:+60336990 | Msa0922160:three_prime_UTR |
| GTTCACGCCGTTGAGCTTCT+CGG | 0.392269 | 6_2:+60326264 | Msa0922160:CDS |
| TTTATGAAGCTCATGATAAA+GGG | 0.410947 | 6_2:+60325233 | Msa0922160:five_prime_UTR |
| AGAGAAGAGATATACTTTCA+TGG | 0.417461 | 6_2:-60326290 | None:intergenic |
| TATGGGCTAATTCTTCTTCA+AGG | 0.425004 | 6_2:+60328651 | Msa0922160:CDS |
| AATGATGCTATTACTCATGA+AGG | 0.440295 | 6_2:+60325742 | Msa0922160:CDS |
| CAAGACAACAAAGTAATAAG+AGG | 0.452623 | 6_2:+60326190 | Msa0922160:CDS |
| TTCCAATGTGGTGAGTTGAT+AGG | 0.454476 | 6_2:-60336113 | None:intergenic |
| TGAACTCCAAGTTTGGATTC+GGG | 0.463473 | 6_2:-60336883 | None:intergenic |
| TTTAGCCAAAGATTATTAGT+TGG | 0.468790 | 6_2:+60337077 | Msa0922160:three_prime_UTR |
| GTTAGATTAAGACCCTTCAA+TGG | 0.480149 | 6_2:+60325910 | Msa0922160:CDS |
| TTGATCATGAGGTTGTGTTA+GGG | 0.490043 | 6_2:-60328573 | None:intergenic |
| ATTGATGTTTGAGAACTGTT+TGG | 0.496183 | 6_2:-60325661 | None:intergenic |
| CAAACTTGGAGTTCACCTTA+GGG | 0.497170 | 6_2:+60336891 | Msa0922160:CDS |
| ATAAAGAGGGATTCCATTGA+AGG | 0.509511 | 6_2:-60325923 | None:intergenic |
| AGACTGCCCGAATCCAAACT+TGG | 0.518461 | 6_2:+60336877 | Msa0922160:CDS |
| GGTTTCAAATCTCACAGTGA+TGG | 0.530276 | 6_2:+60325763 | Msa0922160:CDS |
| CTACACTTCCAACATTCTAT+GGG | 0.540264 | 6_2:+60328634 | Msa0922160:CDS |
| CCACATTGGAAAGCTTCCTC+AGG | 0.553225 | 6_2:+60336125 | Msa0922160:CDS |
| AGAATTAGCCCATAGAATGT+TGG | 0.553625 | 6_2:-60328642 | None:intergenic |
| TATACAATCAAGAAGTTCCA+AGG | 0.562595 | 6_2:+60336844 | Msa0922160:CDS |
| CTCTCTCACACTCTCTCTCA+AGG | 0.564214 | 6_2:+60325120 | Msa0922160:five_prime_UTR |
| AAAGTAATAAGAGGAACATG+AGG | 0.570980 | 6_2:+60326199 | Msa0922160:CDS |
| GGATTGTTATCACTATAAAG+AGG | 0.571992 | 6_2:-60325937 | None:intergenic |
| ATCCTATCAACTCACCACAT+TGG | 0.574962 | 6_2:+60336111 | Msa0922160:CDS |
| ATTATACCTGAAGAAGCTGC+TGG | 0.580120 | 6_2:-60327632 | None:intergenic |
| GATTGTTATCACTATAAAGA+GGG | 0.594862 | 6_2:-60325936 | None:intergenic |
| TGAGGGCTCCGAGAATGCGA+TGG | 0.608831 | 6_2:+60326217 | Msa0922160:CDS |
| AGATCAGGAATCTGATTCTG+TGG | 0.619147 | 6_2:-60325619 | None:intergenic |
| GAAGAACTAGCAGAACAAGA+AGG | 0.619389 | 6_2:-60325997 | None:intergenic |
| TAAAGAGGGATTCCATTGAA+GGG | 0.619445 | 6_2:-60325922 | None:intergenic |
| ACAACATCAACAACAGCAGA+AGG | 0.624077 | 6_2:+60326107 | Msa0922160:CDS |
| TGACTGGCAGTAATGGAACA+TGG | 0.648272 | 6_2:+60336040 | Msa0922160:intron |
| CCTGAGGAAGCTTTCCAATG+TGG | 0.649852 | 6_2:-60336125 | None:intergenic |
| GAGAGAGTGTGAGAGAGATG+TGG | 0.655005 | 6_2:-60325114 | None:intergenic |
| ATGGCCGCCGAGAAGCTCAA+CGG | 0.658735 | 6_2:-60326271 | None:intergenic |
| AAGTAATAAGAGGAACATGA+GGG | 0.670806 | 6_2:+60326200 | Msa0922160:CDS |
| AGTAATGGAACATGGACACA+AGG | 0.680964 | 6_2:+60336048 | Msa0922160:intron |
| CACGCCGTTGAGCTTCTCGG+CGG | 0.701910 | 6_2:+60326267 | Msa0922160:CDS |
| AATTTGGAAATGGATTTGTG+AGG | 0.704670 | 6_2:+60326151 | Msa0922160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTTTTTTTAAAGAA+GGG | - | chr6_2:60325293-60325312 | None:intergenic | 10.0% |
| !!! | ACTTTTTTTTTTTTTAAAGA+AGG | - | chr6_2:60325294-60325313 | None:intergenic | 10.0% |
| !! | TCAATTAAATAATAACAATA+AGG | - | chr6_2:60327049-60327068 | None:intergenic | 10.0% |
| !! | GTTTAATAATAATTTAGTTA+AGG | - | chr6_2:60327455-60327474 | None:intergenic | 10.0% |
| !! | AATTAAAGTTATATTGTATT+GGG | - | chr6_2:60327781-60327800 | None:intergenic | 10.0% |
| !! | TAATTAAAGTTATATTGTAT+TGG | - | chr6_2:60327782-60327801 | None:intergenic | 10.0% |
| !! | AAAAAAATGTATAAATAAAG+GGG | - | chr6_2:60327845-60327864 | None:intergenic | 10.0% |
| !! | TTTAGTATAAATTATACATT+AGG | - | chr6_2:60327936-60327955 | None:intergenic | 10.0% |
| !! | AAAAAATGTTTAAATATTGA+TGG | - | chr6_2:60328053-60328072 | None:intergenic | 10.0% |
| !!! | TCTAAATAATTTTTTTCTTT+GGG | - | chr6_2:60328139-60328158 | None:intergenic | 10.0% |
| !!! | TTCTAAATAATTTTTTTCTT+TGG | - | chr6_2:60328140-60328159 | None:intergenic | 10.0% |
| !!! | ATAACTATACAATTTTAAAA+TGG | + | chr6_2:60328187-60328206 | Msa0922160:intron | 10.0% |
| !!! | TAACTATACAATTTTAAAAT+GGG | + | chr6_2:60328188-60328207 | Msa0922160:intron | 10.0% |
| !! | TTTAAAAGTAGTAAATTTAA+GGG | - | chr6_2:60328384-60328403 | None:intergenic | 10.0% |
| !! | ATTTAAAAGTAGTAAATTTA+AGG | - | chr6_2:60328385-60328404 | None:intergenic | 10.0% |
| !!! | ATTTTGTACAAATTATATTT+TGG | - | chr6_2:60329289-60329308 | None:intergenic | 10.0% |
| !! | TATTATTACATTGAATTATA+TGG | - | chr6_2:60329625-60329644 | None:intergenic | 10.0% |
| !!! | TGAATAGTTTTTAAAATATT+AGG | + | chr6_2:60330275-60330294 | Msa0922160:intron | 10.0% |
| !!! | GAATAGTTTTTAAAATATTA+GGG | + | chr6_2:60330276-60330295 | Msa0922160:intron | 10.0% |
| !!! | AATTTTGAAATATATAGTTA+TGG | - | chr6_2:60330303-60330322 | None:intergenic | 10.0% |
| !!! | TTTAAAATATGTTCATATAT+AGG | + | chr6_2:60330579-60330598 | Msa0922160:intron | 10.0% |
| !! | TTATTTACTACTATAAAAAT+GGG | - | chr6_2:60330854-60330873 | None:intergenic | 10.0% |
| !! | TTTATTTACTACTATAAAAA+TGG | - | chr6_2:60330855-60330874 | None:intergenic | 10.0% |
| !! | AACAAAATATAGAATAATTA+AGG | + | chr6_2:60330987-60331006 | Msa0922160:intron | 10.0% |
| !! | AAATTATTCAAATAATCAAT+AGG | - | chr6_2:60333783-60333802 | None:intergenic | 10.0% |
| !!! | TGAAGTTTTTAAAATTTTAT+TGG | - | chr6_2:60333923-60333942 | None:intergenic | 10.0% |
| !!! | AAATTTTAAAAACTTCAATT+TGG | + | chr6_2:60333926-60333945 | Msa0922160:intron | 10.0% |
| !!! | TTTTTTATTAAAAATGGTAA+AGG | - | chr6_2:60335332-60335351 | None:intergenic | 10.0% |
| !! | TTATTAAACTTTAGTAAAAA+TGG | + | chr6_2:60335394-60335413 | Msa0922160:intron | 10.0% |
| !!! | TTGAAATTATCTTTTTTAAA+AGG | - | chr6_2:60336250-60336269 | None:intergenic | 10.0% |
| !! | AAAAAAGATAATTTCAAATT+TGG | + | chr6_2:60336253-60336272 | Msa0922160:intron | 10.0% |
| !! | AAATTTACTAAAAATAGTAA+AGG | - | chr6_2:60336532-60336551 | None:intergenic | 10.0% |
| !!! | AAATTTTATTAAAAATGACA+AGG | + | chr6_2:60336572-60336591 | Msa0922160:intron | 10.0% |
| !! | ATAAATAAACACACAAAAAA+TGG | - | chr6_2:60325091-60325110 | None:intergenic | 15.0% |
| !!! | AAATTGATGATGAAATTATA+AGG | - | chr6_2:60325321-60325340 | None:intergenic | 15.0% |
| !! | CAAAAATAAATATTGTATAG+AGG | - | chr6_2:60325347-60325366 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTTCTTTCAATTT+TGG | + | chr6_2:60326621-60326640 | Msa0922160:intron | 15.0% |
| !! | TTTATATGTGAAGAAAAATA+GGG | - | chr6_2:60326754-60326773 | None:intergenic | 15.0% |
| !!! | TTTTATATGTGAAGAAAAAT+AGG | - | chr6_2:60326755-60326774 | None:intergenic | 15.0% |
| !! | TAAATTATACATTAGGTATT+AGG | - | chr6_2:60327929-60327948 | None:intergenic | 15.0% |
| !! | ATTTATACTAAATAATTCCT+TGG | + | chr6_2:60327944-60327963 | Msa0922160:intron | 15.0% |
| !!! | CTAAATAATTTTTTTCTTTG+GGG | - | chr6_2:60328138-60328157 | None:intergenic | 15.0% |
| !!! | TTAAAGTGAAAATTTTATCA+AGG | - | chr6_2:60328322-60328341 | None:intergenic | 15.0% |
| !!! | CAATACTATAATTTTCTTAA+TGG | + | chr6_2:60328506-60328525 | Msa0922160:intron | 15.0% |
| !!! | TTAATATCTAGTTTAACTAA+AGG | + | chr6_2:60329208-60329227 | Msa0922160:intron | 15.0% |
| !!! | ATGGTTTTCTTAAATTATTA+AGG | - | chr6_2:60329606-60329625 | None:intergenic | 15.0% |
| !!! | TAATGTTATTTCCAAAAAAT+AGG | - | chr6_2:60329779-60329798 | None:intergenic | 15.0% |
| !! | AAAATTATTACTAGGATTTA+GGG | - | chr6_2:60329883-60329902 | None:intergenic | 15.0% |
| !! | TATGAATCAAAATTATTACT+AGG | - | chr6_2:60329891-60329910 | None:intergenic | 15.0% |
| !! | CAGAAAATAAAAGATAAAAT+AGG | + | chr6_2:60330094-60330113 | Msa0922160:intron | 15.0% |
| !! | AGTTAATCTTGATTATATTA+GGG | + | chr6_2:60330446-60330465 | Msa0922160:intron | 15.0% |
| !!! | TGAACATATTTTAAAACAAT+AGG | - | chr6_2:60330574-60330593 | None:intergenic | 15.0% |
| !! | TAAAACTTATCAAAGATAAA+AGG | + | chr6_2:60330911-60330930 | Msa0922160:intron | 15.0% |
| !! | AAAACTTATCAAAGATAAAA+GGG | + | chr6_2:60330912-60330931 | Msa0922160:intron | 15.0% |
| !! | TTTACAAATGCATATTATAA+AGG | - | chr6_2:60330969-60330988 | None:intergenic | 15.0% |
| !! | TAAGATAACATATGAATATA+TGG | + | chr6_2:60331123-60331142 | Msa0922160:intron | 15.0% |
| !! | CTATTTGATAAAAATGATAA+AGG | - | chr6_2:60331179-60331198 | None:intergenic | 15.0% |
| !! | AAACAGTTTAAATTTAAACT+TGG | - | chr6_2:60332531-60332550 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTAAACAACATAA+AGG | - | chr6_2:60332666-60332685 | None:intergenic | 15.0% |
| !!! | TATTTTATTGTTACAGAAAA+TGG | + | chr6_2:60333641-60333660 | Msa0922160:intron | 15.0% |
| !! | TCAATGAAATTAATAATAGA+AGG | - | chr6_2:60334129-60334148 | None:intergenic | 15.0% |
| !! | CACGATTTAAAAATTTAATA+TGG | + | chr6_2:60334389-60334408 | Msa0922160:intron | 15.0% |
| !! | AGATAATGAATAATATATGT+AGG | + | chr6_2:60334639-60334658 | Msa0922160:intron | 15.0% |
| !! | GATAATGAATAATATATGTA+GGG | + | chr6_2:60334640-60334659 | Msa0922160:intron | 15.0% |
| !! | ATAATGAATAATATATGTAG+GGG | + | chr6_2:60334641-60334660 | Msa0922160:intron | 15.0% |
| !! | TATTTAACTAAACATAGTAT+TGG | + | chr6_2:60334896-60334915 | Msa0922160:intron | 15.0% |
| !!! | ATCATTAAACTATTTTTTAG+AGG | - | chr6_2:60335307-60335326 | None:intergenic | 15.0% |
| !!! | CAATATGTTTTTATTTTTGA+AGG | - | chr6_2:60336226-60336245 | None:intergenic | 15.0% |
| !! | ATATATATAAATAGCTAGTT+AGG | + | chr6_2:60336990-60337009 | Msa0922160:three_prime_UTR | 15.0% |
| !!! | TTCTTGTTTTTCTTTCTTTA+AGG | + | chr6_2:60325412-60325431 | Msa0922160:intron | 20.0% |
| !!! | TCTTGTTTTTCTTTCTTTAA+GGG | + | chr6_2:60325413-60325432 | Msa0922160:intron | 20.0% |
| !! | TTTCTCTTACTATACAATAT+AGG | + | chr6_2:60325466-60325485 | Msa0922160:intron | 20.0% |
| !! | ATGTAACAAAACATAGATAT+AGG | - | chr6_2:60325524-60325543 | None:intergenic | 20.0% |
| !!! | TAGATTCATCTTTTGATATA+TGG | + | chr6_2:60325710-60325729 | Msa0922160:CDS | 20.0% |
| !!! | TTCATATATTGAAACTTTTG+AGG | - | chr6_2:60326066-60326085 | None:intergenic | 20.0% |
| !! | GATCTATACTCATATTAAAA+GGG | - | chr6_2:60326328-60326347 | None:intergenic | 20.0% |
| !! | TGATCTATACTCATATTAAA+AGG | - | chr6_2:60326329-60326348 | None:intergenic | 20.0% |
| !! | AAAGTGTATGTTTAGATTAA+CGG | - | chr6_2:60326486-60326505 | None:intergenic | 20.0% |
| !! | TTCTTTCTATATTTGATCTT+TGG | + | chr6_2:60327126-60327145 | Msa0922160:intron | 20.0% |
| !! | AATGAATGTAAAAGAATTAG+AGG | + | chr6_2:60327278-60327297 | Msa0922160:intron | 20.0% |
| !!! | GGTTTTTTTTTTTTTTGCAA+CGG | - | chr6_2:60327370-60327389 | None:intergenic | 20.0% |
| !!! | ATCGTTCGATTTTAAATTAA+TGG | - | chr6_2:60327486-60327505 | None:intergenic | 20.0% |
| !! | TAATATATGAGAAAATTGTG+TGG | - | chr6_2:60327534-60327553 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr6_2:60327712-60327731 | None:intergenic | 20.0% |
| !! | TCTTTACATATATAAAGTGA+AGG | + | chr6_2:60328073-60328092 | Msa0922160:intron | 20.0% |
| !! | CTTTATTAAACAATGCTATT+AGG | - | chr6_2:60328115-60328134 | None:intergenic | 20.0% |
| !! | AATCTTTATTATGTATCCTA+AGG | - | chr6_2:60328230-60328249 | None:intergenic | 20.0% |
| !! | AATGTTAACAAGTGTATTTA+GGG | - | chr6_2:60328420-60328439 | None:intergenic | 20.0% |
| !! | AAATGTTAACAAGTGTATTT+AGG | - | chr6_2:60328421-60328440 | None:intergenic | 20.0% |
| !! | TAAAGCAAGAAATTAAGAAA+TGG | - | chr6_2:60328679-60328698 | None:intergenic | 20.0% |
| !!! | TTTACCTTTTTTACAATTGA+AGG | + | chr6_2:60329150-60329169 | Msa0922160:intron | 20.0% |
| !!! | TTACCTTTTTTACAATTGAA+GGG | + | chr6_2:60329151-60329170 | Msa0922160:intron | 20.0% |
| !! | TTGGCTTAAAAAAATTATCT+AGG | - | chr6_2:60329270-60329289 | None:intergenic | 20.0% |
| !! | TTCAAATTAGTATATTGTCT+GGG | - | chr6_2:60329355-60329374 | None:intergenic | 20.0% |
| !! | TTTCAAATTAGTATATTGTC+TGG | - | chr6_2:60329356-60329375 | None:intergenic | 20.0% |
| !! | AATAATTCATATTCTCTATG+AGG | - | chr6_2:60329501-60329520 | None:intergenic | 20.0% |
| !! | TTCAATGTAATAATATGTGT+CGG | + | chr6_2:60329630-60329649 | Msa0922160:intron | 20.0% |
| !!! | CAATAAGATATCCTATTTTT+TGG | + | chr6_2:60329765-60329784 | Msa0922160:intron | 20.0% |
| !! | CAAAATTATTACTAGGATTT+AGG | - | chr6_2:60329884-60329903 | None:intergenic | 20.0% |
| !!! | ATTTTGATTCATAATTGAGT+TGG | + | chr6_2:60329898-60329917 | Msa0922160:intron | 20.0% |
| !! | AATAAAAGATAAAATAGGTG+TGG | + | chr6_2:60330099-60330118 | Msa0922160:intron | 20.0% |
| !! | TAAAGATTATTTATGCCTTT+AGG | + | chr6_2:60330124-60330143 | Msa0922160:intron | 20.0% |
| !!! | TAAAAATTTTCTCTACCTAA+AGG | - | chr6_2:60330142-60330161 | None:intergenic | 20.0% |
| !! | GAGTTAATCTTGATTATATT+AGG | + | chr6_2:60330445-60330464 | Msa0922160:intron | 20.0% |
| !!! | TAAGAGAGTTTTTTTTTTGA+AGG | + | chr6_2:60330496-60330515 | Msa0922160:intron | 20.0% |
| !!! | CATATTTTAAAACAATAGGT+AGG | - | chr6_2:60330570-60330589 | None:intergenic | 20.0% |
| !! | TCTCAAAAATAGTTTAAAGA+TGG | + | chr6_2:60330821-60330840 | Msa0922160:intron | 20.0% |
| !! | CTCAAAAATAGTTTAAAGAT+GGG | + | chr6_2:60330822-60330841 | Msa0922160:intron | 20.0% |
| !! | CTAATATGAATATGATTCAA+TGG | - | chr6_2:60330942-60330961 | None:intergenic | 20.0% |
| !! | CATATGAGTAAAAATTGATT+TGG | + | chr6_2:60331931-60331950 | Msa0922160:intron | 20.0% |
| !!! | TTCTTTGTTTTTCAATTGAT+GGG | - | chr6_2:60332007-60332026 | None:intergenic | 20.0% |
| !! | ATCAAACAACATATATAGAT+GGG | + | chr6_2:60332258-60332277 | Msa0922160:intron | 20.0% |
| !! | TACAGTAAAATATTGATCAT+AGG | + | chr6_2:60332589-60332608 | Msa0922160:intron | 20.0% |
| !! | ACAGTAAAATATTGATCATA+GGG | + | chr6_2:60332590-60332609 | Msa0922160:intron | 20.0% |
| !! | TAAAGGTTCAATCTTAAAAA+TGG | - | chr6_2:60332649-60332668 | None:intergenic | 20.0% |
| !!! | AGTTGTTGATTTCTAAATAT+GGG | - | chr6_2:60333544-60333563 | None:intergenic | 20.0% |
| !!! | GTTCACTTTAGTATATTTTT+AGG | + | chr6_2:60333677-60333696 | Msa0922160:intron | 20.0% |
| !! | AATATATTTGAGGACTATAA+TGG | - | chr6_2:60334080-60334099 | None:intergenic | 20.0% |
| !!! | TTATTTTGTAATGAGTTTAG+TGG | - | chr6_2:60334544-60334563 | None:intergenic | 20.0% |
| !! | TTCTGTAATAAAATCTCATA+TGG | + | chr6_2:60334788-60334807 | Msa0922160:intron | 20.0% |
| !!! | AATGTAAATGATTGCATTTT+TGG | + | chr6_2:60335224-60335243 | Msa0922160:intron | 20.0% |
| !! | TAAACTTTAGTAAAAATGGT+AGG | + | chr6_2:60335398-60335417 | Msa0922160:intron | 20.0% |
| !! | AAACTTTAGTAAAAATGGTA+GGG | + | chr6_2:60335399-60335418 | Msa0922160:intron | 20.0% |
| !! | AAGCTACTTATAGAAAATAA+GGG | - | chr6_2:60335457-60335476 | None:intergenic | 20.0% |
| !! | TAAGCTACTTATAGAAAATA+AGG | - | chr6_2:60335458-60335477 | None:intergenic | 20.0% |
| !! | TAATGAATAAAATCAGAATG+TGG | - | chr6_2:60335520-60335539 | None:intergenic | 20.0% |
| !! | GAAAATTGTTTATATACAAG+AGG | + | chr6_2:60335542-60335561 | Msa0922160:intron | 20.0% |
| !! | CAAGAATAAATTATGAGTAT+GGG | - | chr6_2:60335747-60335766 | None:intergenic | 20.0% |
| !! | ACAAGAATAAATTATGAGTA+TGG | - | chr6_2:60335748-60335767 | None:intergenic | 20.0% |
| !! | AAGAATAATATAGTTAACGT+GGG | - | chr6_2:60335799-60335818 | None:intergenic | 20.0% |
| !! | AAAGAATAATATAGTTAACG+TGG | - | chr6_2:60335800-60335819 | None:intergenic | 20.0% |
| !!! | CGTTAACTATATTATTCTTT+TGG | + | chr6_2:60335800-60335819 | Msa0922160:intron | 20.0% |
| !! | TACTTATCTGTCAAAAAAAT+TGG | + | chr6_2:60335916-60335935 | Msa0922160:intron | 20.0% |
| !!! | TTTTTAGTATAGAATAAGTG+AGG | - | chr6_2:60336164-60336183 | None:intergenic | 20.0% |
| !! | ATTCTATACTAAAAATAGCT+AGG | + | chr6_2:60336169-60336188 | Msa0922160:intron | 20.0% |
| !! | ATCTAAAGATTAATTCATGT+GGG | - | chr6_2:60336456-60336475 | None:intergenic | 20.0% |
| !! | TATCTAAAGATTAATTCATG+TGG | - | chr6_2:60336457-60336476 | None:intergenic | 20.0% |
| !! | CTTTAGATATTGCAAAATAT+TGG | + | chr6_2:60336468-60336487 | Msa0922160:intron | 20.0% |
| !!! | TAACTTTAGACCATTTTTTT+AGG | + | chr6_2:60336597-60336616 | Msa0922160:intron | 20.0% |
| !! | TAAGTATGAACCTAAAAAAA+TGG | - | chr6_2:60336610-60336629 | None:intergenic | 20.0% |
| !!! | TTTTTAGGTTCATACTTATT+CGG | + | chr6_2:60336612-60336631 | Msa0922160:intron | 20.0% |
| !!! | CAAAATTTTAACGTCAAATA+TGG | + | chr6_2:60336657-60336676 | Msa0922160:intron | 20.0% |
| !! | TACAAACATCATATATGATA+TGG | - | chr6_2:60336772-60336791 | None:intergenic | 20.0% |
| !!! | AAATTAATTTTATCTCCCTA+AGG | - | chr6_2:60336909-60336928 | None:intergenic | 20.0% |
| !! | TTAGTTATTTACATGATTCA+TGG | + | chr6_2:60336928-60336947 | Msa0922160:three_prime_UTR | 20.0% |
| !!! | TGCACTATTTTTTTTTTCTA+TGG | - | chr6_2:60336967-60336986 | None:intergenic | 20.0% |
| !! | AAAACATATACAAAGTTTCT+TGG | - | chr6_2:60337056-60337075 | None:intergenic | 20.0% |
| !! | AAGTAAAAGTTGAAAAAAGA+AGG | + | chr6_2:60337124-60337143 | Msa0922160:three_prime_UTR | 20.0% |
| ! | TAAACACACAAAAAATGGAA+AGG | - | chr6_2:60325086-60325105 | None:intergenic | 25.0% |
| !! | TTTTATGAAGCTCATGATAA+AGG | + | chr6_2:60325232-60325251 | Msa0922160:five_prime_UTR | 25.0% |
| ! | TTTATGAAGCTCATGATAAA+GGG | + | chr6_2:60325233-60325252 | Msa0922160:five_prime_UTR | 25.0% |
| !!! | GATGATTAATAGAAGTACTT+TGG | - | chr6_2:60325371-60325390 | None:intergenic | 25.0% |
| !!! | AAAAGTAGCTGTTTTTGTTT+TGG | - | chr6_2:60325854-60325873 | None:intergenic | 25.0% |
| ! | GATTGTTATCACTATAAAGA+GGG | - | chr6_2:60325939-60325958 | None:intergenic | 25.0% |
| ! | GAATCTTTCTCTATTATTGA+AGG | - | chr6_2:60325961-60325980 | None:intergenic | 25.0% |
| !!! | TCAACTTTTTCAAGGTTTAA+TGG | + | chr6_2:60326018-60326037 | Msa0922160:CDS | 25.0% |
| !! | TTCTTTCTTTCAATTTTGGA+TGG | + | chr6_2:60326625-60326644 | Msa0922160:intron | 25.0% |
| ! | GTTCTATTATTGAGAAATGA+TGG | - | chr6_2:60326998-60327017 | None:intergenic | 25.0% |
| !!! | AACAATAAGGTTGATATGTT+TGG | - | chr6_2:60327036-60327055 | None:intergenic | 25.0% |
| ! | TTCTCTTTCAAGATTTCAAA+GGG | - | chr6_2:60327176-60327195 | None:intergenic | 25.0% |
| ! | TTTCTCTTTCAAGATTTCAA+AGG | - | chr6_2:60327177-60327196 | None:intergenic | 25.0% |
| ! | GATAAAAAGAGAAAGATAGA+AGG | + | chr6_2:60327242-60327261 | Msa0922160:intron | 25.0% |
| ! | AATCTTAATTGTCCTTCTAT+TGG | + | chr6_2:60327570-60327589 | Msa0922160:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr6_2:60327713-60327732 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr6_2:60327734-60327753 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr6_2:60327735-60327754 | None:intergenic | 25.0% |
| !!! | ATTGTTAATTTGTGCACTTA+GGG | - | chr6_2:60328360-60328379 | None:intergenic | 25.0% |
| !!! | AATTGTTAATTTGTGCACTT+AGG | - | chr6_2:60328361-60328380 | None:intergenic | 25.0% |
| ! | ATATAATGCAATGTAACAGA+CGG | + | chr6_2:60328533-60328552 | Msa0922160:intron | 25.0% |
| !!! | TAGTTCTTATTTTGATCATG+AGG | - | chr6_2:60328587-60328606 | None:intergenic | 25.0% |
| ! | TATATATATGCATGAATGCA+TGG | + | chr6_2:60328796-60328815 | Msa0922160:intron | 25.0% |
| !! | TTTTGTGTTTCACAAAAGAA+TGG | - | chr6_2:60328828-60328847 | None:intergenic | 25.0% |
| ! | TTGATCTAAAAAAGCAGAAT+TGG | - | chr6_2:60328894-60328913 | None:intergenic | 25.0% |
| ! | TAAAGAACTTGTACCAAAAA+GGG | - | chr6_2:60328946-60328965 | None:intergenic | 25.0% |
| ! | TTAAAGAACTTGTACCAAAA+AGG | - | chr6_2:60328947-60328966 | None:intergenic | 25.0% |
| ! | GTAAACAAGTTAATATAGAG+AGG | - | chr6_2:60329127-60329146 | None:intergenic | 25.0% |
| ! | ATAAGTTCGAATCATATCAA+TGG | - | chr6_2:60329435-60329454 | None:intergenic | 25.0% |
| ! | AAATACTATAAAGCCAACAT+TGG | + | chr6_2:60330329-60330348 | Msa0922160:intron | 25.0% |
| ! | AATACTATAAAGCCAACATT+GGG | + | chr6_2:60330330-60330349 | Msa0922160:intron | 25.0% |
| ! | TTAGGCTTAAATCAAGAATT+CGG | - | chr6_2:60330639-60330658 | None:intergenic | 25.0% |
| ! | ACCATAGTTAGGTTAAATTT+AGG | - | chr6_2:60330657-60330676 | None:intergenic | 25.0% |
| ! | TAAAATGCAAAACTAAGAGA+TGG | + | chr6_2:60330769-60330788 | Msa0922160:intron | 25.0% |
| ! | CTAAGAGATGGTTTATTAAT+AGG | + | chr6_2:60330781-60330800 | Msa0922160:intron | 25.0% |
| ! | ATTAATAGGTCAATCTAACA+AGG | + | chr6_2:60330795-60330814 | Msa0922160:intron | 25.0% |
| !! | TAAGGTATCACTTTCTTAAA+AGG | + | chr6_2:60331005-60331024 | Msa0922160:intron | 25.0% |
| ! | TCACTTTCTTAAAAGGATTA+AGG | + | chr6_2:60331012-60331031 | Msa0922160:intron | 25.0% |
| ! | AAAAACGCAAAACTCAAAAA+GGG | - | chr6_2:60331062-60331081 | None:intergenic | 25.0% |
| ! | TAAAAACGCAAAACTCAAAA+AGG | - | chr6_2:60331063-60331082 | None:intergenic | 25.0% |
| ! | ATGATATTTGTTTGTAGGTT+GGG | - | chr6_2:60331330-60331349 | None:intergenic | 25.0% |
| ! | AATGATATTTGTTTGTAGGT+TGG | - | chr6_2:60331331-60331350 | None:intergenic | 25.0% |
| ! | GTTGAATGATATTTGTTTGT+AGG | - | chr6_2:60331335-60331354 | None:intergenic | 25.0% |
| ! | ATTTAATCCTATCATGTGTT+TGG | + | chr6_2:60331530-60331549 | Msa0922160:intron | 25.0% |
| ! | AATGAAATAGTTGCAAAGAA+TGG | + | chr6_2:60331877-60331896 | Msa0922160:intron | 25.0% |
| !!! | TGGAAAAACAATTTTGAGTA+AGG | + | chr6_2:60331951-60331970 | Msa0922160:intron | 25.0% |
| !!! | GTTCTTTGTTTTTCAATTGA+TGG | - | chr6_2:60332008-60332027 | None:intergenic | 25.0% |
| ! | TATTCTCTACAATTACTCTA+TGG | - | chr6_2:60332124-60332143 | None:intergenic | 25.0% |
| ! | AAGTCAATAGATTTGTGATT+TGG | + | chr6_2:60332144-60332163 | Msa0922160:intron | 25.0% |
| ! | TTAAATTTATCCTATCCTGT+TGG | + | chr6_2:60332232-60332251 | Msa0922160:intron | 25.0% |
| ! | CATCAAACAACATATATAGA+TGG | + | chr6_2:60332257-60332276 | Msa0922160:intron | 25.0% |
| ! | TCAGTCTAATATATGTATGA+TGG | - | chr6_2:60332380-60332399 | None:intergenic | 25.0% |
| ! | AAATCTTTGAATGTCTACAT+CGG | - | chr6_2:60332419-60332438 | None:intergenic | 25.0% |
| ! | GATACATTGATAGATATTCA+TGG | + | chr6_2:60332935-60332954 | Msa0922160:intron | 25.0% |
| ! | TTTAACTACCCGTTATTTAA+TGG | + | chr6_2:60332975-60332994 | Msa0922160:intron | 25.0% |
| ! | ATCTGTATCCATTAAATAAC+GGG | - | chr6_2:60332986-60333005 | None:intergenic | 25.0% |
| ! | CATCTGTATCCATTAAATAA+CGG | - | chr6_2:60332987-60333006 | None:intergenic | 25.0% |
| ! | GTCTATACTAGATATGTAAA+TGG | - | chr6_2:60333071-60333090 | None:intergenic | 25.0% |
| !! | AAACAAGATCATCTTCTTTT+TGG | - | chr6_2:60333275-60333294 | None:intergenic | 25.0% |
| !! | GAAGATGATCTTGTTTATAT+TGG | + | chr6_2:60333279-60333298 | Msa0922160:intron | 25.0% |
| ! | GAAGACTTATAAGAATTGTT+TGG | - | chr6_2:60333310-60333329 | None:intergenic | 25.0% |
| !!! | GAGTTGTTGATTTCTAAATA+TGG | - | chr6_2:60333545-60333564 | None:intergenic | 25.0% |
| ! | TTATTGTTACAGAAAATGGT+AGG | + | chr6_2:60333645-60333664 | Msa0922160:intron | 25.0% |
| ! | TAATAACTCGTTCATATTCA+AGG | + | chr6_2:60333832-60333851 | Msa0922160:intron | 25.0% |
| ! | TTTAAGTCATGCATGTATTA+GGG | + | chr6_2:60334003-60334022 | Msa0922160:intron | 25.0% |
| ! | ATGTATTAGGGAAATAATTG+AGG | + | chr6_2:60334015-60334034 | Msa0922160:intron | 25.0% |
| !! | TTGAGGTTAAACAGTTATTT+TGG | + | chr6_2:60334032-60334051 | Msa0922160:intron | 25.0% |
| ! | TTCTGATCTCAATATATTTG+AGG | - | chr6_2:60334090-60334109 | None:intergenic | 25.0% |
| !! | AAGATCACACATTTTAAATG+TGG | - | chr6_2:60334698-60334717 | None:intergenic | 25.0% |
| ! | ATGATGTATGTACATTTGAT+AGG | + | chr6_2:60334815-60334834 | Msa0922160:intron | 25.0% |
| ! | TGATGTATGTACATTTGATA+GGG | + | chr6_2:60334816-60334835 | Msa0922160:intron | 25.0% |
| !!! | ATTTTTGGTATGTTTCTAGA+AGG | + | chr6_2:60335239-60335258 | Msa0922160:intron | 25.0% |
| ! | AGCTACTTATAGAAAATAAG+GGG | - | chr6_2:60335456-60335475 | None:intergenic | 25.0% |
| ! | GTGAAATGTGTTTGTAAAAA+AGG | + | chr6_2:60335487-60335506 | Msa0922160:intron | 25.0% |
| ! | TAACAAACTCATCCTAATAT+AGG | + | chr6_2:60335566-60335585 | Msa0922160:intron | 25.0% |
| ! | AAAAGACTAGAAGTTGTATT+TGG | - | chr6_2:60335592-60335611 | None:intergenic | 25.0% |
| ! | AACTGTGATATGTTCAATAA+TGG | + | chr6_2:60335675-60335694 | Msa0922160:intron | 25.0% |
| !!! | TAGACTTTTCAAGACTATAT+TGG | + | chr6_2:60335698-60335717 | Msa0922160:intron | 25.0% |
| ! | ATATGACAATGACATATGAT+GGG | + | chr6_2:60335979-60335998 | Msa0922160:intron | 25.0% |
| ! | TATAGAATAAGTGAGGATTA+GGG | - | chr6_2:60336157-60336176 | None:intergenic | 25.0% |
| !!! | TTCACTTTAGACTGTTTTTT+AGG | - | chr6_2:60336509-60336528 | None:intergenic | 25.0% |
| ! | TTTAGCCAAAGATTATTAGT+TGG | + | chr6_2:60337077-60337096 | Msa0922160:three_prime_UTR | 25.0% |
| ! | TATCACCAACTAATAATCTT+TGG | - | chr6_2:60337085-60337104 | None:intergenic | 25.0% |
| ! | AATTCTCCTTTGTTTGTTTC+AGG | + | chr6_2:60325556-60325575 | Msa0922160:intron | 30.0% |
| TTTCAACCTGAAACAAACAA+AGG | - | chr6_2:60325565-60325584 | None:intergenic | 30.0% | |
| ! | GAAATTTGAAGTGAAAGATC+AGG | - | chr6_2:60325637-60325656 | None:intergenic | 30.0% |
| ATTGATGTTTGAGAACTGTT+TGG | - | chr6_2:60325664-60325683 | None:intergenic | 30.0% | |
| AATGATGCTATTACTCATGA+AGG | + | chr6_2:60325742-60325761 | Msa0922160:CDS | 30.0% | |
| GGATTGTTATCACTATAAAG+AGG | - | chr6_2:60325940-60325959 | None:intergenic | 30.0% | |
| !!! | CTAGTTCTTCAACTTTTTCA+AGG | + | chr6_2:60326010-60326029 | Msa0922160:CDS | 30.0% |
| CAGTTTGGAAATTCTGAATT+TGG | + | chr6_2:60326135-60326154 | Msa0922160:CDS | 30.0% | |
| GGAAATTCTGAATTTGGAAA+TGG | + | chr6_2:60326141-60326160 | Msa0922160:CDS | 30.0% | |
| ! | AATTTGGAAATGGATTTGTG+AGG | + | chr6_2:60326151-60326170 | Msa0922160:CDS | 30.0% |
| ! | CTCTTATTACTTTGTTGTCT+TGG | - | chr6_2:60326192-60326211 | None:intergenic | 30.0% |
| CAAGACAACAAAGTAATAAG+AGG | + | chr6_2:60326190-60326209 | Msa0922160:CDS | 30.0% | |
| AAAGTAATAAGAGGAACATG+AGG | + | chr6_2:60326199-60326218 | Msa0922160:CDS | 30.0% | |
| AAGTAATAAGAGGAACATGA+GGG | + | chr6_2:60326200-60326219 | Msa0922160:CDS | 30.0% | |
| AGAGAAGAGATATACTTTCA+TGG | - | chr6_2:60326293-60326312 | None:intergenic | 30.0% | |
| GTGAATTTGACAAAATCTCA+GGG | + | chr6_2:60326396-60326415 | Msa0922160:intron | 30.0% | |
| ! | TTCTTTCAATTTTGGATGGT+AGG | + | chr6_2:60326629-60326648 | Msa0922160:intron | 30.0% |
| ! | ATTAGCTCCAAAACTGATTT+AGG | - | chr6_2:60326662-60326681 | None:intergenic | 30.0% |
| !!! | TAAATCAGTTTTGGAGCTAA+TGG | + | chr6_2:60326661-60326680 | Msa0922160:CDS | 30.0% |
| TTAGAAGATAGAGTAGACTT+TGG | - | chr6_2:60326832-60326851 | None:intergenic | 30.0% | |
| TGTTTGGTAAGGTAAGTAAT+TGG | - | chr6_2:60327020-60327039 | None:intergenic | 30.0% | |
| !! | TAAGGTTGATATGTTTGGTA+AGG | - | chr6_2:60327031-60327050 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr6_2:60327838-60327857 | None:intergenic | 30.0% | |
| !!! | AAATTTTGGAACAAAGACCA+AGG | - | chr6_2:60327964-60327983 | None:intergenic | 30.0% |
| !! | GTAAAGTGGACTTCAAATTT+TGG | - | chr6_2:60327978-60327997 | None:intergenic | 30.0% |
| TTCACAGGAATTAAGTAAAG+TGG | - | chr6_2:60327992-60328011 | None:intergenic | 30.0% | |
| AAAGAACTTGTACCAAAAAG+GGG | - | chr6_2:60328945-60328964 | None:intergenic | 30.0% | |
| TAACCTAGATGAATTCTTAG+TGG | + | chr6_2:60328998-60329017 | Msa0922160:intron | 30.0% | |
| AAACCACTAAGAATTCATCT+AGG | - | chr6_2:60329004-60329023 | None:intergenic | 30.0% | |
| ! | GAAAGTATACAACAATCGTT+AGG | - | chr6_2:60329067-60329086 | None:intergenic | 30.0% |
| CGATTGTTGTATACTTTCTA+TGG | + | chr6_2:60329069-60329088 | Msa0922160:intron | 30.0% | |
| ACTCCCTTCAATTGTAAAAA+AGG | - | chr6_2:60329157-60329176 | None:intergenic | 30.0% | |
| AGACACTACATATAATAGAG+AGG | - | chr6_2:60329189-60329208 | None:intergenic | 30.0% | |
| !! | GGTATTGATTTATTGCATGA+AGG | - | chr6_2:60329405-60329424 | None:intergenic | 30.0% |
| AATCATATCAATGGAGATCT+TGG | - | chr6_2:60329426-60329445 | None:intergenic | 30.0% | |
| GCACAAATACTTCTTGAATT+AGG | - | chr6_2:60329668-60329687 | None:intergenic | 30.0% | |
| GTATTTGTGCTTCATGTAAT+AGG | + | chr6_2:60329678-60329697 | Msa0922160:intron | 30.0% | |
| ! | TTGATCTAAAACATGTGTCT+TGG | + | chr6_2:60329714-60329733 | Msa0922160:intron | 30.0% |
| ACACAGATTCATACCTTTAT+AGG | + | chr6_2:60329855-60329874 | Msa0922160:intron | 30.0% | |
| !!! | TCACGTTATTTTTCTGCAAT+AGG | + | chr6_2:60329969-60329988 | Msa0922160:intron | 30.0% |
| !!! | CACGTTATTTTTCTGCAATA+GGG | + | chr6_2:60329970-60329989 | Msa0922160:intron | 30.0% |
| ATATATAGGTCCAGTTGTAT+TGG | + | chr6_2:60330593-60330612 | Msa0922160:intron | 30.0% | |
| GCCTAAATTTAACCTAACTA+TGG | + | chr6_2:60330653-60330672 | Msa0922160:intron | 30.0% | |
| TTTAACCTAACTATGGTCTT+TGG | + | chr6_2:60330660-60330679 | Msa0922160:intron | 30.0% | |
| ACTCTTATCTATCTTAAGTG+TGG | - | chr6_2:60331357-60331376 | None:intergenic | 30.0% | |
| GACAAGATATGATAAAGAAC+TGG | + | chr6_2:60331422-60331441 | Msa0922160:intron | 30.0% | |
| CACTTATCATATCCTATGTT+TGG | + | chr6_2:60331477-60331496 | Msa0922160:intron | 30.0% | |
| ATCATGTGTTAACCAAACAT+AGG | - | chr6_2:60331492-60331511 | None:intergenic | 30.0% | |
| ! | AAAAAAAAAACGGAAGCACA+CGG | + | chr6_2:60331841-60331860 | Msa0922160:intron | 30.0% |
| AAATAGTTGCAAAGAATGGA+TGG | + | chr6_2:60331881-60331900 | Msa0922160:intron | 30.0% | |
| !! | CAATTTTGAGTAAGGAATCA+TGG | + | chr6_2:60331959-60331978 | Msa0922160:intron | 30.0% |
| ! | AATCATGGATTGTATACGAT+TGG | + | chr6_2:60331974-60331993 | Msa0922160:intron | 30.0% |
| TGAAAAACAAAGAACTGACA+TGG | + | chr6_2:60332013-60332032 | Msa0922160:intron | 30.0% | |
| ACAAAGAGTTGGGAAAAAAT+TGG | + | chr6_2:60332045-60332064 | Msa0922160:intron | 30.0% | |
| ATTGGAATGGTTATGAAGAA+TGG | + | chr6_2:60332063-60332082 | Msa0922160:intron | 30.0% | |
| ! | TCAATAGATTTGTGATTTGG+TGG | + | chr6_2:60332147-60332166 | Msa0922160:intron | 30.0% |
| !! | CAATAGATTTGTGATTTGGT+GGG | + | chr6_2:60332148-60332167 | Msa0922160:intron | 30.0% |
| ! | TGATAGGATAGGATTAGTAA+TGG | + | chr6_2:60332208-60332227 | Msa0922160:intron | 30.0% |
| ! | GATAGGATAGGATTAGTAAT+GGG | + | chr6_2:60332209-60332228 | Msa0922160:intron | 30.0% |
| ATCTTTGCTTCTATCTTTGA+GGG | - | chr6_2:60332334-60332353 | None:intergenic | 30.0% | |
| TATCTTTGCTTCTATCTTTG+AGG | - | chr6_2:60332335-60332354 | None:intergenic | 30.0% | |
| TAGAATGTGTGTGTCTAAAA+TGG | + | chr6_2:60332353-60332372 | Msa0922160:intron | 30.0% | |
| ! | ATTTTACTGTATTTACGCAG+TGG | - | chr6_2:60332580-60332599 | None:intergenic | 30.0% |
| GTCCATTAATAATACAGGTT+TGG | + | chr6_2:60332620-60332639 | Msa0922160:intron | 30.0% | |
| CTCCAAACCTGTATTATTAA+TGG | - | chr6_2:60332625-60332644 | None:intergenic | 30.0% | |
| TGTCTATATGACACTTGTTT+AGG | - | chr6_2:60332779-60332798 | None:intergenic | 30.0% | |
| ACAATTGAGAGAGGTAAAAA+GGG | - | chr6_2:60332811-60332830 | None:intergenic | 30.0% | |
| AACAATTGAGAGAGGTAAAA+AGG | - | chr6_2:60332812-60332831 | None:intergenic | 30.0% | |
| ATGATCTCTTTGTTCAGTTT+AGG | - | chr6_2:60332843-60332862 | None:intergenic | 30.0% | |
| ACTGAACAAAGAGATCATAT+AGG | + | chr6_2:60332845-60332864 | Msa0922160:intron | 30.0% | |
| ! | ATTTTATCCGCATATATCCA+CGG | - | chr6_2:60332896-60332915 | None:intergenic | 30.0% |
| ! | GTAGATTTGATGGTATCTAA+CGG | + | chr6_2:60333006-60333025 | Msa0922160:intron | 30.0% |
| ! | TAGATTTGATGGTATCTAAC+GGG | + | chr6_2:60333007-60333026 | Msa0922160:intron | 30.0% |
| TAAATGGATATACATTAGCG+CGG | - | chr6_2:60333055-60333074 | None:intergenic | 30.0% | |
| TGACCATAATCCTCAAATAA+AGG | + | chr6_2:60333488-60333507 | Msa0922160:intron | 30.0% | |
| ! | ACTCCTTTATTTGAGGATTA+TGG | - | chr6_2:60333494-60333513 | None:intergenic | 30.0% |
| GATAATATGAAACCTTTGGA+AGG | - | chr6_2:60333567-60333586 | None:intergenic | 30.0% | |
| GACTGATAATATGAAACCTT+TGG | - | chr6_2:60333571-60333590 | None:intergenic | 30.0% | |
| CTTTAAGTCATGCATGTATT+AGG | + | chr6_2:60334002-60334021 | Msa0922160:intron | 30.0% | |
| ! | AATAATAGAAGGCACATTCA+TGG | - | chr6_2:60334118-60334137 | None:intergenic | 30.0% |
| TTAAAGATTATCGTCACTCA+AGG | + | chr6_2:60334203-60334222 | Msa0922160:intron | 30.0% | |
| GGAAAAATTTAAGTCCTACA+TGG | + | chr6_2:60334288-60334307 | Msa0922160:intron | 30.0% | |
| ! | ATTTTAAATGTGGAGAAGTG+GGG | - | chr6_2:60334688-60334707 | None:intergenic | 30.0% |
| ! | CATTTTAAATGTGGAGAAGT+GGG | - | chr6_2:60334689-60334708 | None:intergenic | 30.0% |
| ! | ACATTTTAAATGTGGAGAAG+TGG | - | chr6_2:60334690-60334709 | None:intergenic | 30.0% |
| ! | ATTGGTGTTCCTTGAAAATT+AGG | + | chr6_2:60334914-60334933 | Msa0922160:intron | 30.0% |
| ACACACCCTAAATATGATTA+GGG | + | chr6_2:60334941-60334960 | Msa0922160:intron | 30.0% | |
| TCATGTTGTAATGAGTTTAG+TGG | - | chr6_2:60334970-60334989 | None:intergenic | 30.0% | |
| AATAAGGGGTTGTCAAATAT+GGG | - | chr6_2:60335442-60335461 | None:intergenic | 30.0% | |
| AAATAAGGGGTTGTCAAATA+TGG | - | chr6_2:60335443-60335462 | None:intergenic | 30.0% | |
| AGTTGTATTTGGCCTATATT+AGG | - | chr6_2:60335581-60335600 | None:intergenic | 30.0% | |
| AGTTATAAGTTCAAGGAAAG+TGG | + | chr6_2:60335835-60335854 | Msa0922160:intron | 30.0% | |
| CATATGACAATGACATATGA+TGG | + | chr6_2:60335978-60335997 | Msa0922160:intron | 30.0% | |
| ATATTAATGACTGGCAGTAA+TGG | + | chr6_2:60336033-60336052 | Msa0922160:intron | 30.0% | |
| !!! | TAGTTCTGGAAATCATTTTG+AGG | + | chr6_2:60336071-60336090 | Msa0922160:CDS | 30.0% |
| GTATAGAATAAGTGAGGATT+AGG | - | chr6_2:60336158-60336177 | None:intergenic | 30.0% | |
| ! | TTGGACATTTGAGATTTACT+TGG | + | chr6_2:60336272-60336291 | Msa0922160:intron | 30.0% |
| AACTCACTCAAATTAGCATT+AGG | - | chr6_2:60336350-60336369 | None:intergenic | 30.0% | |
| AATAAACACACCAAAGTCAA+AGG | - | chr6_2:60336689-60336708 | None:intergenic | 30.0% | |
| TATACAATCAAGAAGTTCCA+AGG | + | chr6_2:60336844-60336863 | Msa0922160:CDS | 30.0% | |
| AAAAATGGAAAGGAGAGAGA+AGG | - | chr6_2:60325076-60325095 | None:intergenic | 35.0% | |
| ! | GATATAGGACAATCAAGTTG+AGG | - | chr6_2:60325509-60325528 | None:intergenic | 35.0% |
| GTTAGATTAAGACCCTTCAA+TGG | + | chr6_2:60325910-60325929 | Msa0922160:CDS | 35.0% | |
| TAAAGAGGGATTCCATTGAA+GGG | - | chr6_2:60325925-60325944 | None:intergenic | 35.0% | |
| ATAAAGAGGGATTCCATTGA+AGG | - | chr6_2:60325926-60325945 | None:intergenic | 35.0% | |
| ATCATCTGCACCAATACAAT+TGG | + | chr6_2:60326345-60326364 | Msa0922160:intron | 35.0% | |
| CACCAATACAATTGGATTGT+TGG | + | chr6_2:60326353-60326372 | Msa0922160:intron | 35.0% | |
| GACCAACAATCCAATTGTAT+TGG | - | chr6_2:60326358-60326377 | None:intergenic | 35.0% | |
| GGTCTGTATGTTTAGATTGA+CGG | + | chr6_2:60326374-60326393 | Msa0922160:intron | 35.0% | |
| GGTGAATTTGACAAAATCTC+AGG | + | chr6_2:60326395-60326414 | Msa0922160:intron | 35.0% | |
| ! | ATTATCGATTGTAGTGTCGT+TGG | + | chr6_2:60326510-60326529 | Msa0922160:intron | 35.0% |
| ! | AGCTACTCCTAAATCAGTTT+TGG | + | chr6_2:60326652-60326671 | Msa0922160:CDS | 35.0% |
| TCATGTCAAGAGTCATTTAC+AGG | + | chr6_2:60326706-60326725 | Msa0922160:CDS | 35.0% | |
| AGTCTACTCTATCTTCTAAG+AGG | + | chr6_2:60326833-60326852 | Msa0922160:intron | 35.0% | |
| CATGAAAAGTAGAACTTGTC+TGG | - | chr6_2:60326932-60326951 | None:intergenic | 35.0% | |
| TTAATTGAACAAACCCCTAG+AGG | + | chr6_2:60327061-60327080 | Msa0922160:intron | 35.0% | |
| ! | AGATGCTTCTTTTTCCTCTA+GGG | - | chr6_2:60327078-60327097 | None:intergenic | 35.0% |
| AGTCATTGAGTTAAGATCGA+TGG | + | chr6_2:60327417-60327436 | Msa0922160:intron | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr6_2:60327699-60327718 | None:intergenic | 35.0% | |
| GGGAATGATGAAAGTTGTAT+TGG | - | chr6_2:60327761-60327780 | None:intergenic | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr6_2:60327868-60327887 | Msa0922160:intron | 35.0% | |
| ! | CAAACTGGCTCAGATAAAAT+GGG | + | chr6_2:60327883-60327902 | Msa0922160:intron | 35.0% |
| !! | GAGTCATAAAGTTTTGTGAG+AGG | - | chr6_2:60328019-60328038 | None:intergenic | 35.0% |
| ! | TCATGCTAACTTGTATCCTT+AGG | + | chr6_2:60328211-60328230 | Msa0922160:intron | 35.0% |
| TTGATCATGAGGTTGTGTTA+GGG | - | chr6_2:60328576-60328595 | None:intergenic | 35.0% | |
| TTTGATCATGAGGTTGTGTT+AGG | - | chr6_2:60328577-60328596 | None:intergenic | 35.0% | |
| GCATCTCTAGATCATGATAT+TGG | + | chr6_2:60328611-60328630 | Msa0922160:CDS | 35.0% | |
| CTACACTTCCAACATTCTAT+GGG | + | chr6_2:60328634-60328653 | Msa0922160:CDS | 35.0% | |
| AGAATTAGCCCATAGAATGT+TGG | - | chr6_2:60328645-60328664 | None:intergenic | 35.0% | |
| ! | TATGGGCTAATTCTTCTTCA+AGG | + | chr6_2:60328651-60328670 | Msa0922160:CDS | 35.0% |
| ! | ATATGTGTGATACCCCTTTT+TGG | + | chr6_2:60328930-60328949 | Msa0922160:intron | 35.0% |
| !!! | GCATGAAGGTGTTTTTTGTT+TGG | - | chr6_2:60329391-60329410 | None:intergenic | 35.0% |
| TGATTCGAACTTATCTCTTG+AGG | + | chr6_2:60329441-60329460 | Msa0922160:intron | 35.0% | |
| CATTCTATGAAGCATGTGTA+CGG | + | chr6_2:60329533-60329552 | Msa0922160:intron | 35.0% | |
| ! | AAAACATGTGTCTTGGTCTT+TGG | + | chr6_2:60329721-60329740 | Msa0922160:intron | 35.0% |
| ! | AAACATGTGTCTTGGTCTTT+GGG | + | chr6_2:60329722-60329741 | Msa0922160:intron | 35.0% |
| !! | TGGTCTTTGGGATTACAATA+TGG | + | chr6_2:60329734-60329753 | Msa0922160:intron | 35.0% |
| AGGATTTAGGGAACCTATAA+AGG | - | chr6_2:60329871-60329890 | None:intergenic | 35.0% | |
| CAAGTCAAATCCAATACAAC+TGG | - | chr6_2:60330606-60330625 | None:intergenic | 35.0% | |
| ! | TATTTGTTTGTAGGTTGGGT+AGG | - | chr6_2:60331326-60331345 | None:intergenic | 35.0% |
| ATAAAGAACTGGATAACGAC+AGG | + | chr6_2:60331433-60331452 | Msa0922160:intron | 35.0% | |
| ! | AAAAAAAAACGGAAGCACAC+GGG | + | chr6_2:60331842-60331861 | Msa0922160:intron | 35.0% |
| GATTACGCAAACAAAGAGTT+GGG | + | chr6_2:60332035-60332054 | Msa0922160:intron | 35.0% | |
| GAGTTGGGAAAAAATTGGAA+TGG | + | chr6_2:60332050-60332069 | Msa0922160:intron | 35.0% | |
| CATGGTAGATATGTAGAGAA+TGG | + | chr6_2:60332095-60332114 | Msa0922160:intron | 35.0% | |
| !! | TAGAAAGCACTTGATAGGAT+AGG | + | chr6_2:60332197-60332216 | Msa0922160:intron | 35.0% |
| ATATTGATCATAGGGAAACG+TGG | + | chr6_2:60332598-60332617 | Msa0922160:intron | 35.0% | |
| ACGTGGTCCATTAATAATAC+AGG | + | chr6_2:60332615-60332634 | Msa0922160:intron | 35.0% | |
| CTACAAATTTCATCTCCTCT+AGG | + | chr6_2:60332709-60332728 | Msa0922160:intron | 35.0% | |
| ! | AATTTCATCTCCTCTAGGAA+TGG | + | chr6_2:60332714-60332733 | Msa0922160:intron | 35.0% |
| TTTAGGCAATTTGGTCACTT+AGG | - | chr6_2:60332762-60332781 | None:intergenic | 35.0% | |
| TGACACTTGTTTAGGCAATT+TGG | - | chr6_2:60332771-60332790 | None:intergenic | 35.0% | |
| TGGTTAACAACAATTGAGAG+AGG | - | chr6_2:60332820-60332839 | None:intergenic | 35.0% | |
| ATCTCTTTGTTCAGTTTAGG+TGG | - | chr6_2:60332840-60332859 | None:intergenic | 35.0% | |
| CAAAGAGATCATATAGGCTA+AGG | + | chr6_2:60332851-60332870 | Msa0922160:intron | 35.0% | |
| ! | TTTTATCCGCATATATCCAC+GGG | - | chr6_2:60332895-60332914 | None:intergenic | 35.0% |
| TAAAATTCGCCACAAACATG+TGG | + | chr6_2:60332910-60332929 | Msa0922160:intron | 35.0% | |
| GGATACAGATGTAGATTTGA+TGG | + | chr6_2:60332996-60333015 | Msa0922160:intron | 35.0% | |
| TAACATCCCAAACTGCTTTA+AGG | + | chr6_2:60333097-60333116 | Msa0922160:intron | 35.0% | |
| GACAATCCTTAAAGCAGTTT+GGG | - | chr6_2:60333106-60333125 | None:intergenic | 35.0% | |
| !! | AAAGACTTGTGTTGGTTTGT+GGG | - | chr6_2:60333136-60333155 | None:intergenic | 35.0% |
| !! | AAAAGACTTGTGTTGGTTTG+TGG | - | chr6_2:60333137-60333156 | None:intergenic | 35.0% |
| !!! | GCTTGACTTGCAGAAATTTT+GGG | - | chr6_2:60333218-60333237 | None:intergenic | 35.0% |
| !!! | TGCTTGACTTGCAGAAATTT+TGG | - | chr6_2:60333219-60333238 | None:intergenic | 35.0% |
| TCTAAATATGGGAGTAGTGT+AGG | - | chr6_2:60333533-60333552 | None:intergenic | 35.0% | |
| AAATCAACAACTCCTTCCAA+AGG | + | chr6_2:60333552-60333571 | Msa0922160:intron | 35.0% | |
| AACATAGCATGTTAGCAAAG+TGG | - | chr6_2:60333608-60333627 | None:intergenic | 35.0% | |
| GAGCAAGACAAACTTATTCA+TGG | + | chr6_2:60333711-60333730 | Msa0922160:intron | 35.0% | |
| ! | CATGGTCGTCTCTAATATTT+TGG | + | chr6_2:60333729-60333748 | Msa0922160:intron | 35.0% |
| ! | TAAGCGAGTTGAGTTCTATT+GGG | + | chr6_2:60334267-60334286 | Msa0922160:intron | 35.0% |
| AAGTCCTACATGGACAAAAT+AGG | + | chr6_2:60334298-60334317 | Msa0922160:intron | 35.0% | |
| ! | AAGTCCTATTTTGTCCATGT+AGG | - | chr6_2:60334305-60334324 | None:intergenic | 35.0% |
| ! | CATGGACAAAATAGGACTTT+TGG | + | chr6_2:60334306-60334325 | Msa0922160:intron | 35.0% |
| ! | TTTGGCAAGAGTGTATAATG+TGG | + | chr6_2:60334324-60334343 | Msa0922160:intron | 35.0% |
| ACTTACAAAACCGTCTTGTA+AGG | - | chr6_2:60334359-60334378 | None:intergenic | 35.0% | |
| !! | ACAAGACGGTTTTGTAAGTT+TGG | + | chr6_2:60334360-60334379 | Msa0922160:intron | 35.0% |
| !! | CAAGACGGTTTTGTAAGTTT+GGG | + | chr6_2:60334361-60334380 | Msa0922160:intron | 35.0% |
| ! | GTTTGAAGCGTGCATATAAA+TGG | - | chr6_2:60334443-60334462 | None:intergenic | 35.0% |
| GTGTATCGGAAAAAACCATT+AGG | + | chr6_2:60334486-60334505 | Msa0922160:intron | 35.0% | |
| TTATCTCTACCAATTGAGCT+AGG | - | chr6_2:60334625-60334644 | None:intergenic | 35.0% | |
| ! | TGTGTGAGTCCTAATTTTCA+AGG | - | chr6_2:60334926-60334945 | None:intergenic | 35.0% |
| CACACACCCTAAATATGATT+AGG | + | chr6_2:60334940-60334959 | Msa0922160:intron | 35.0% | |
| GGCAACCCTAATCATATTTA+GGG | - | chr6_2:60334949-60334968 | None:intergenic | 35.0% | |
| TGGCAACCCTAATCATATTT+AGG | - | chr6_2:60334950-60334969 | None:intergenic | 35.0% | |
| AAAATGGTAGGGTTCATCTT+TGG | + | chr6_2:60335410-60335429 | Msa0922160:intron | 35.0% | |
| CATCAGCAGTTATAAGTTCA+AGG | + | chr6_2:60335828-60335847 | Msa0922160:intron | 35.0% | |
| TGTTCCCTGATATTAATGAC+TGG | + | chr6_2:60336024-60336043 | Msa0922160:intron | 35.0% | |
| ACTGCCAGTCATTAATATCA+GGG | - | chr6_2:60336031-60336050 | None:intergenic | 35.0% | |
| TACTGCCAGTCATTAATATC+AGG | - | chr6_2:60336032-60336051 | None:intergenic | 35.0% | |
| AGTCAGTTCATCATTAGATC+AGG | + | chr6_2:60336409-60336428 | Msa0922160:intron | 35.0% | |
| ! | ATGGTTGTATCCTTTGACTT+TGG | + | chr6_2:60336676-60336695 | Msa0922160:intron | 35.0% |
| CTCTCTTCATGAGTCTTTGA+AGG | + | chr6_2:60325202-60325221 | Msa0922160:five_prime_UTR | 40.0% | |
| AGATCAGGAATCTGATTCTG+TGG | - | chr6_2:60325622-60325641 | None:intergenic | 40.0% | |
| GGTTTCAAATCTCACAGTGA+TGG | + | chr6_2:60325763-60325782 | Msa0922160:CDS | 40.0% | |
| !! | TTTCTGAAGCTGAGAGTGTT+TGG | + | chr6_2:60325872-60325891 | Msa0922160:CDS | 40.0% |
| GAAGAACTAGCAGAACAAGA+AGG | - | chr6_2:60326000-60326019 | None:intergenic | 40.0% | |
| ACAACATCAACAACAGCAGA+AGG | + | chr6_2:60326107-60326126 | Msa0922160:CDS | 40.0% | |
| CTCTTTATGTGTGACTGAAG+TGG | + | chr6_2:60326801-60326820 | Msa0922160:intron | 40.0% | |
| ! | GATGCTTCTTTTTCCTCTAG+GGG | - | chr6_2:60327077-60327096 | None:intergenic | 40.0% |
| ! | CAGATGCTTCTTTTTCCTCT+AGG | - | chr6_2:60327079-60327098 | None:intergenic | 40.0% |
| CATCTGCAGAAACCAATAGA+AGG | - | chr6_2:60327585-60327604 | None:intergenic | 40.0% | |
| ATTATACCTGAAGAAGCTGC+TGG | - | chr6_2:60327635-60327654 | None:intergenic | 40.0% | |
| !! | GAGGGAGTACTAAAACAACT+TGG | - | chr6_2:60327672-60327691 | None:intergenic | 40.0% |
| GAAAATGGGTCAGATATTCC+GGG | - | chr6_2:60327698-60327717 | None:intergenic | 40.0% | |
| ! | CCATTTTATCTGAGCCAGTT+TGG | - | chr6_2:60327885-60327904 | None:intergenic | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+TGG | + | chr6_2:60327882-60327901 | Msa0922160:intron | 40.0% |
| TTTGTGAGAGGAATCTTCAC+AGG | - | chr6_2:60328007-60328026 | None:intergenic | 40.0% | |
| CAATCTCTAGCAGAATGAGT+TGG | + | chr6_2:60328288-60328307 | Msa0922160:intron | 40.0% | |
| GCTACACTTCCAACATTCTA+TGG | + | chr6_2:60328633-60328652 | Msa0922160:CDS | 40.0% | |
| !! | AAAGGGGTATCACACATATG+AGG | - | chr6_2:60328929-60328948 | None:intergenic | 40.0% |
| ! | TTCTCTATGAGGTGTCTGTA+TGG | - | chr6_2:60329490-60329509 | None:intergenic | 40.0% |
| AACACATTCTCACCCAATGT+TGG | - | chr6_2:60330345-60330364 | None:intergenic | 40.0% | |
| CTAGTCCAAAGACCATAGTT+AGG | - | chr6_2:60330668-60330687 | None:intergenic | 40.0% | |
| CTAACTATGGTCTTTGGACT+AGG | + | chr6_2:60330666-60330685 | Msa0922160:intron | 40.0% | |
| GTATACATTCAGAGTCCGTT+TGG | + | chr6_2:60331381-60331400 | Msa0922160:intron | 40.0% | |
| ATCCTATCATGTGCACCAAA+CGG | - | chr6_2:60331399-60331418 | None:intergenic | 40.0% | |
| ! | GATGGAAGCACATCGAAATT+TGG | + | chr6_2:60331899-60331918 | Msa0922160:intron | 40.0% |
| GGATTACGCAAACAAAGAGT+TGG | + | chr6_2:60332034-60332053 | Msa0922160:intron | 40.0% | |
| !! | GGGAATAGAAAGCACTTGAT+AGG | + | chr6_2:60332192-60332211 | Msa0922160:intron | 40.0% |
| ! | ATGTTGTTTGATGCACCAAC+AGG | - | chr6_2:60332250-60332269 | None:intergenic | 40.0% |
| TCTTTATTCTGCGCACCAAA+CGG | + | chr6_2:60332307-60332326 | Msa0922160:intron | 40.0% | |
| ATTGAGAGAGGTAAAAAGGG+AGG | - | chr6_2:60332808-60332827 | None:intergenic | 40.0% | |
| ATGTATCCACCACATGTTTG+TGG | - | chr6_2:60332922-60332941 | None:intergenic | 40.0% | |
| CGACAATCCTTAAAGCAGTT+TGG | - | chr6_2:60333107-60333126 | None:intergenic | 40.0% | |
| !! | AAGACTTGTGTTGGTTTGTG+GGG | - | chr6_2:60333135-60333154 | None:intergenic | 40.0% |
| !!! | ACTTGCAGAAATTTTGGGAC+GGG | - | chr6_2:60333213-60333232 | None:intergenic | 40.0% |
| !! | GACTTGCAGAAATTTTGGGA+CGG | - | chr6_2:60333214-60333233 | None:intergenic | 40.0% |
| GCTTAACTGTGAAGTTCTTG+TGG | + | chr6_2:60333240-60333259 | Msa0922160:intron | 40.0% | |
| ! | GTTTTGCCAAGAAACATGCT+AGG | + | chr6_2:60333392-60333411 | Msa0922160:intron | 40.0% |
| ACAGAAAATGGTAGGAGAGT+AGG | + | chr6_2:60333653-60333672 | Msa0922160:intron | 40.0% | |
| ! | ATAGAAGGCACATTCATGGA+TGG | - | chr6_2:60334114-60334133 | None:intergenic | 40.0% |
| ! | CTAAGCGAGTTGAGTTCTAT+TGG | + | chr6_2:60334266-60334285 | Msa0922160:intron | 40.0% |
| AAAACCGTCTTGTAAGGTGA+GGG | - | chr6_2:60334353-60334372 | None:intergenic | 40.0% | |
| GAAGCGTGCATATAAATGGT+GGG | - | chr6_2:60334439-60334458 | None:intergenic | 40.0% | |
| TGAAGCGTGCATATAAATGG+TGG | - | chr6_2:60334440-60334459 | None:intergenic | 40.0% | |
| CCTTCACTTCCAACGTTATT+GGG | - | chr6_2:60334465-60334484 | None:intergenic | 40.0% | |
| CCAATAACGTTGGAAGTGAA+GGG | + | chr6_2:60334463-60334482 | Msa0922160:intron | 40.0% | |
| CAATAACGTTGGAAGTGAAG+GGG | + | chr6_2:60334464-60334483 | Msa0922160:intron | 40.0% | |
| TACCAATTGAGCTAGGTTCA+CGG | - | chr6_2:60334618-60334637 | None:intergenic | 40.0% | |
| AATAATATATGTAGGGGCCG+AGG | + | chr6_2:60334647-60334666 | Msa0922160:intron | 40.0% | |
| ATGTGTGATCTTCAACCACT+AGG | + | chr6_2:60334706-60334725 | Msa0922160:intron | 40.0% | |
| TCTTCAACCACTAGGTTACT+TGG | + | chr6_2:60334714-60334733 | Msa0922160:intron | 40.0% | |
| ! | GTTTTTGCCAAGTAACCTAG+TGG | - | chr6_2:60334724-60334743 | None:intergenic | 40.0% |
| ATTTGATAGGGTGAGAGAAG+TGG | + | chr6_2:60334828-60334847 | Msa0922160:intron | 40.0% | |
| TTTGATAGGGTGAGAGAAGT+GGG | + | chr6_2:60334829-60334848 | Msa0922160:intron | 40.0% | |
| AAGTTCAAGGAAAGTGGTAC+AGG | + | chr6_2:60335841-60335860 | Msa0922160:intron | 40.0% | |
| ! | AGTAATGGAACATGGACACA+AGG | + | chr6_2:60336048-60336067 | Msa0922160:intron | 40.0% |
| ATCCTATCAACTCACCACAT+TGG | + | chr6_2:60336111-60336130 | Msa0922160:CDS | 40.0% | |
| !! | TTCCAATGTGGTGAGTTGAT+AGG | - | chr6_2:60336116-60336135 | None:intergenic | 40.0% |
| AGGATTAGGGTTTATACCTG+AGG | - | chr6_2:60336144-60336163 | None:intergenic | 40.0% | |
| AGTAAGTCAGTACATCCTCA+AGG | + | chr6_2:60336313-60336332 | Msa0922160:intron | 40.0% | |
| ACACAACTGTTTACTTGTGC+AGG | + | chr6_2:60336811-60336830 | Msa0922160:intron | 40.0% | |
| CACAACTGTTTACTTGTGCA+GGG | + | chr6_2:60336812-60336831 | Msa0922160:intron | 40.0% | |
| !!! | GCAGTCTATGTTTTGATCCT+TGG | - | chr6_2:60336864-60336883 | None:intergenic | 40.0% |
| TGAACTCCAAGTTTGGATTC+GGG | - | chr6_2:60336886-60336905 | None:intergenic | 40.0% | |
| GTGAACTCCAAGTTTGGATT+CGG | - | chr6_2:60336887-60336906 | None:intergenic | 40.0% | |
| CAAACTTGGAGTTCACCTTA+GGG | + | chr6_2:60336891-60336910 | Msa0922160:CDS | 40.0% | |
| CAGCAGAAGGTGAATCAGTT+TGG | + | chr6_2:60326120-60326139 | Msa0922160:CDS | 45.0% | |
| GAACTAGTCCATCGCATTCT+CGG | - | chr6_2:60326228-60326247 | None:intergenic | 45.0% | |
| CATTCAATCACTGCATGCCT+TGG | - | chr6_2:60326867-60326886 | None:intergenic | 45.0% | |
| AAAACCTCACGATGACACTC+TGG | + | chr6_2:60327384-60327403 | Msa0922160:intron | 45.0% | |
| CTGGCTCAGATAAAATGGGA+CGG | + | chr6_2:60327887-60327906 | Msa0922160:intron | 45.0% | |
| CTCAGATAAAATGGGACGGA+GGG | + | chr6_2:60327891-60327910 | Msa0922160:intron | 45.0% | |
| ! | TGAGGTGTCTGTATGGTGAT+AGG | - | chr6_2:60329483-60329502 | None:intergenic | 45.0% |
| ATGAAGCATGTGTACGGACA+CGG | + | chr6_2:60329539-60329558 | Msa0922160:intron | 45.0% | |
| TCCTTGCAAGTCAGAAAGAC+AGG | + | chr6_2:60329994-60330013 | Msa0922160:intron | 45.0% | |
| ! | ACCTGTCTTTCTGACTTGCA+AGG | - | chr6_2:60329998-60330017 | None:intergenic | 45.0% |
| ! | GTGCAGAAGAAAGTGTGTAC+TGG | - | chr6_2:60331270-60331289 | None:intergenic | 45.0% |
| GTGTGCACCAAACACATGAT+AGG | - | chr6_2:60331540-60331559 | None:intergenic | 45.0% | |
| ! | GAAGAATGGAAGCACACACA+TGG | + | chr6_2:60332077-60332096 | Msa0922160:intron | 45.0% |
| GTTTGATGCACCAACAGGAT+AGG | - | chr6_2:60332245-60332264 | None:intergenic | 45.0% | |
| ! | TCTATCTTTGAGGGTCCGTT+TGG | - | chr6_2:60332325-60332344 | None:intergenic | 45.0% |
| ! | ATCTCCTCTAGGAATGGCAT+TGG | + | chr6_2:60332720-60332739 | Msa0922160:intron | 45.0% |
| ! | TCTCCTCTAGGAATGGCATT+GGG | + | chr6_2:60332721-60332740 | Msa0922160:intron | 45.0% |
| GCAATTTGGTCACTTAGGAG+TGG | - | chr6_2:60332757-60332776 | None:intergenic | 45.0% | |
| AATTCGCCACAAACATGTGG+TGG | + | chr6_2:60332913-60332932 | Msa0922160:intron | 45.0% | |
| CACGCTGAAAAGACTTGTGT+TGG | - | chr6_2:60333144-60333163 | None:intergenic | 45.0% | |
| TTACCGGGAAACTTCTCAGT+AGG | + | chr6_2:60333184-60333203 | Msa0922160:intron | 45.0% | |
| TGACCTACTGAGAAGTTTCC+CGG | - | chr6_2:60333190-60333209 | None:intergenic | 45.0% | |
| TCGAAATGAGAGAGATCCTG+AGG | - | chr6_2:60333363-60333382 | None:intergenic | 45.0% | |
| ! | CCTTGGCACTCCTTTATTTG+AGG | - | chr6_2:60333501-60333520 | None:intergenic | 45.0% |
| !! | CCTCAAATAAAGGAGTGCCA+AGG | + | chr6_2:60333498-60333517 | Msa0922160:intron | 45.0% |
| AAACCGTCTTGTAAGGTGAG+GGG | - | chr6_2:60334352-60334371 | None:intergenic | 45.0% | |
| CAAAACCGTCTTGTAAGGTG+AGG | - | chr6_2:60334354-60334373 | None:intergenic | 45.0% | |
| CGCTTCAAACCCAATAACGT+TGG | + | chr6_2:60334453-60334472 | Msa0922160:intron | 45.0% | |
| CCCAATAACGTTGGAAGTGA+AGG | + | chr6_2:60334462-60334481 | Msa0922160:intron | 45.0% | |
| CCCTTCACTTCCAACGTTAT+TGG | - | chr6_2:60334466-60334485 | None:intergenic | 45.0% | |
| ! | TTGGAAGTGAAGGGGTGTAT+CGG | + | chr6_2:60334472-60334491 | Msa0922160:intron | 45.0% |
| CACACACGCTAGACATGATT+AGG | + | chr6_2:60334514-60334533 | Msa0922160:intron | 45.0% | |
| ACCAATTGAGCTAGGTTCAC+GGG | - | chr6_2:60334617-60334636 | None:intergenic | 45.0% | |
| TTGATAGGGTGAGAGAAGTG+GGG | + | chr6_2:60334830-60334849 | Msa0922160:intron | 45.0% | |
| CACGCACACTAAGTATAGAG+AGG | - | chr6_2:60335145-60335164 | None:intergenic | 45.0% | |
| ! | TGACTGGCAGTAATGGAACA+TGG | + | chr6_2:60336040-60336059 | Msa0922160:intron | 45.0% |
| ACATGGACACAAGGTAGTTC+TGG | + | chr6_2:60336057-60336076 | Msa0922160:CDS | 45.0% | |
| TAGGAAGAATCGAGACCTTG+AGG | - | chr6_2:60336331-60336350 | None:intergenic | 45.0% | |
| CAGGACCATGTTAGAGAGAT+AGG | + | chr6_2:60336428-60336447 | Msa0922160:intron | 45.0% | |
| CCTAAGGTGAACTCCAAGTT+TGG | - | chr6_2:60336893-60336912 | None:intergenic | 45.0% | |
| CCAAACTTGGAGTTCACCTT+AGG | + | chr6_2:60336890-60336909 | Msa0922160:CDS | 45.0% | |
| !!! | TTCAAAAAAATATATTTTTT+TGG | - | chr6_2:60325442-60325461 | None:intergenic | 5.0% |
| !!! | AAAAAAATATATTTTTTTGA+AGG | + | chr6_2:60325441-60325460 | Msa0922160:intron | 5.0% |
| !!! | AAAAAATATATTTTTTTGAA+GGG | + | chr6_2:60325442-60325461 | Msa0922160:intron | 5.0% |
| !! | AAAAAAAATGTATAAATAAA+GGG | - | chr6_2:60327846-60327865 | None:intergenic | 5.0% |
| !! | AAAAAAAAATGTATAAATAA+AGG | - | chr6_2:60327847-60327866 | None:intergenic | 5.0% |
| !! | TATAAAAATAAATTATGAAA+TGG | + | chr6_2:60329316-60329335 | Msa0922160:intron | 5.0% |
| !!! | TTTTTTTACAAATTTTTATT+TGG | - | chr6_2:60331716-60331735 | None:intergenic | 5.0% |
| !! | ATAGAAATAAAAAAAAAAAA+CGG | + | chr6_2:60331831-60331850 | Msa0922160:intron | 5.0% |
| !!! | TAAATATTTTTGTATTATTA+AGG | - | chr6_2:60334882-60334901 | None:intergenic | 5.0% |
| !!! | ATTCTTTTTTTTATTAAAAA+TGG | - | chr6_2:60335338-60335357 | None:intergenic | 5.0% |
| !!! | TATATTATTATTATTTTTGT+TGG | - | chr6_2:60336386-60336405 | None:intergenic | 5.0% |
| !!! | ATTTTTAGTAAATTTAAAAA+TGG | + | chr6_2:60336537-60336556 | Msa0922160:intron | 5.0% |
| !!! | TTTTTAGTAAATTTAAAAAT+GGG | + | chr6_2:60336538-60336557 | Msa0922160:intron | 5.0% |
| ! | GAGAGAGTGTGAGAGAGATG+TGG | - | chr6_2:60325117-60325136 | None:intergenic | 50.0% |
| CTCTCTCACACTCTCTCTCA+AGG | + | chr6_2:60325120-60325139 | Msa0922160:five_prime_UTR | 50.0% | |
| ! | TCTAAGAGGCACAAGAGCCA+AGG | + | chr6_2:60326847-60326866 | Msa0922160:intron | 50.0% |
| ! | CAATCCAGAGTGTCATCGTG+AGG | - | chr6_2:60327391-60327410 | None:intergenic | 50.0% |
| CTCACGATGACACTCTGGAT+TGG | + | chr6_2:60327389-60327408 | Msa0922160:intron | 50.0% | |
| ! | TTTTAGTACTCCCTCCGTCC+CGG | + | chr6_2:60327677-60327696 | Msa0922160:intron | 50.0% |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr6_2:60327694-60327713 | None:intergenic | 50.0% | |
| GCTCAGATAAAATGGGACGG+AGG | + | chr6_2:60327890-60327909 | Msa0922160:intron | 50.0% | |
| CATGTGTACGGACACGGATA+CGG | + | chr6_2:60329545-60329564 | Msa0922160:intron | 50.0% | |
| !!! | GGAGAGTGTGAGCTGGTTTT+TGG | - | chr6_2:60331298-60331317 | None:intergenic | 50.0% |
| ! | TTTGTAGGTTGGGTAGGCAG+GGG | - | chr6_2:60331320-60331339 | None:intergenic | 50.0% |
| ! | GTTTGTAGGTTGGGTAGGCA+GGG | - | chr6_2:60331321-60331340 | None:intergenic | 50.0% |
| ! | TGTTTGTAGGTTGGGTAGGC+AGG | - | chr6_2:60331322-60331341 | None:intergenic | 50.0% |
| !! | GTCCGTTTGGTGCACATGAT+AGG | + | chr6_2:60331394-60331413 | Msa0922160:intron | 50.0% |
| ! | AAACGGAAGCACACGGGAAA+TGG | + | chr6_2:60331848-60331867 | Msa0922160:intron | 50.0% |
| ! | AACGGAAGCACACGGGAAAT+GGG | + | chr6_2:60331849-60331868 | Msa0922160:intron | 50.0% |
| !! | TGTGATTTGGTGGGAGTCGA+AGG | + | chr6_2:60332157-60332176 | Msa0922160:intron | 50.0% |
| ! | ATTTGGTGGGAGTCGAAGGA+GGG | + | chr6_2:60332161-60332180 | Msa0922160:intron | 50.0% |
| GGTGCGCAGAATAAAGAGAC+AGG | - | chr6_2:60332304-60332323 | None:intergenic | 50.0% | |
| GTTCCCAATGCCATTCCTAG+AGG | - | chr6_2:60332727-60332746 | None:intergenic | 50.0% | |
| CCAAGAAACATGCTAGGAGC+CGG | + | chr6_2:60333398-60333417 | Msa0922160:intron | 50.0% | |
| CTATGTGTAACACCTCCGCT+TGG | - | chr6_2:60333465-60333484 | None:intergenic | 50.0% | |
| TGGGAGTAGTGTAGGCCATT+CGG | - | chr6_2:60333525-60333544 | None:intergenic | 50.0% | |
| AGCGTGTGTGCAAGTCCTAA+TGG | - | chr6_2:60334504-60334523 | None:intergenic | 50.0% | |
| CCAATTGAGCTAGGTTCACG+GGG | - | chr6_2:60334616-60334635 | None:intergenic | 50.0% | |
| CCTGAGGAAGCTTTCCAATG+TGG | - | chr6_2:60336128-60336147 | None:intergenic | 50.0% | |
| CCACATTGGAAAGCTTCCTC+AGG | + | chr6_2:60336125-60336144 | Msa0922160:CDS | 50.0% | |
| GGGAGCCTATCTCTCTAACA+TGG | - | chr6_2:60336436-60336455 | None:intergenic | 50.0% | |
| AGACTGCCCGAATCCAAACT+TGG | + | chr6_2:60336877-60336896 | Msa0922160:CDS | 50.0% | |
| GTTCACGCCGTTGAGCTTCT+CGG | + | chr6_2:60326264-60326283 | Msa0922160:CDS | 55.0% | |
| GACAAGCCAGCAGCTTCTTC+AGG | + | chr6_2:60327626-60327645 | Msa0922160:CDS | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr6_2:60327690-60327709 | None:intergenic | 55.0% | |
| ! | TTGTAGGTTGGGTAGGCAGG+GGG | - | chr6_2:60331319-60331338 | None:intergenic | 55.0% |
| !! | GATTTGGTGGGAGTCGAAGG+AGG | + | chr6_2:60332160-60332179 | Msa0922160:intron | 55.0% |
| TCCGCATATATCCACGGGTG+CGG | - | chr6_2:60332890-60332909 | None:intergenic | 55.0% | |
| GTACGGGACTGCATGGTTGA+AGG | - | chr6_2:60333332-60333351 | None:intergenic | 55.0% | |
| CCGGCTCCTAGCATGTTTCT+TGG | - | chr6_2:60333401-60333420 | None:intergenic | 55.0% | |
| GTGTAACACCTCCGCTTGGT+GGG | - | chr6_2:60333461-60333480 | None:intergenic | 55.0% | |
| TGTGTAACACCTCCGCTTGG+TGG | - | chr6_2:60333462-60333481 | None:intergenic | 55.0% | |
| !! | AAGGAGTGCCAAGGTCCGAA+TGG | + | chr6_2:60333507-60333526 | Msa0922160:intron | 55.0% |
| AGTGTAGGCCATTCGGACCT+TGG | - | chr6_2:60333518-60333537 | None:intergenic | 55.0% | |
| GCACCCCTCACCTTACAAGA+CGG | + | chr6_2:60334346-60334365 | Msa0922160:intron | 55.0% | |
| CCCCGTGAACCTAGCTCAAT+TGG | + | chr6_2:60334613-60334632 | Msa0922160:intron | 55.0% | |
| ! | ATGTGGAGAAGTGGGGTGTC+CGG | - | chr6_2:60334681-60334700 | None:intergenic | 55.0% |
| TGAGGGCTCCGAGAATGCGA+TGG | + | chr6_2:60326217-60326236 | Msa0922160:CDS | 60.0% | |
| ATGGCCGCCGAGAAGCTCAA+CGG | - | chr6_2:60326274-60326293 | None:intergenic | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | - | chr6_2:60327691-60327710 | None:intergenic | 60.0% | |
| TGGGAGTCGAAGGAGGGTGA+AGG | + | chr6_2:60332167-60332186 | Msa0922160:intron | 60.0% | |
| GGGAGTCGAAGGAGGGTGAA+GGG | + | chr6_2:60332168-60332187 | Msa0922160:intron | 60.0% | |
| AGTCGAAGGAGGGTGAAGGG+TGG | + | chr6_2:60332171-60332190 | Msa0922160:intron | 60.0% | |
| GTCGAAGGAGGGTGAAGGGT+GGG | + | chr6_2:60332172-60332191 | Msa0922160:intron | 60.0% | |
| GACAAAAGAACCCGCACCCG+TGG | + | chr6_2:60332876-60332895 | Msa0922160:intron | 60.0% | |
| CCGCATATATCCACGGGTGC+GGG | - | chr6_2:60332889-60332908 | None:intergenic | 60.0% | |
| CCCGCACCCGTGGATATATG+CGG | + | chr6_2:60332886-60332905 | Msa0922160:intron | 60.0% | |
| GTCCTCACTCGCACGCTTAC+CGG | + | chr6_2:60333168-60333187 | Msa0922160:intron | 60.0% | |
| TCCTCACTCGCACGCTTACC+GGG | + | chr6_2:60333169-60333188 | Msa0922160:intron | 60.0% | |
| CATGCAGTCCCGTACCTGCA+CGG | + | chr6_2:60333337-60333356 | Msa0922160:intron | 60.0% | |
| ATCCTGAGGCCGTGCAGGTA+CGG | - | chr6_2:60333349-60333368 | None:intergenic | 60.0% | |
| GTAACGCCCGAGGCTGATGA+GGG | - | chr6_2:60333435-60333454 | None:intergenic | 60.0% | |
| TGTAACGCCCGAGGCTGATG+AGG | - | chr6_2:60333436-60333455 | None:intergenic | 60.0% | |
| GGCGTTACATGCCCACCAAG+CGG | + | chr6_2:60333447-60333466 | Msa0922160:intron | 60.0% | |
| GTTACATGCCCACCAAGCGG+AGG | + | chr6_2:60333450-60333469 | Msa0922160:intron | 60.0% | |
| GGTGTCCGGAGTTCGAACCT+CGG | - | chr6_2:60334667-60334686 | None:intergenic | 60.0% | |
| CACGCCGTTGAGCTTCTCGG+CGG | + | chr6_2:60326267-60326286 | Msa0922160:CDS | 65.0% | |
| TCCCGGTAAGCGTGCGAGTG+AGG | - | chr6_2:60333173-60333192 | None:intergenic | 65.0% | |
| CGTGCAGGTACGGGACTGCA+TGG | - | chr6_2:60333339-60333358 | None:intergenic | 65.0% | |
| TCCTGAGGCCGTGCAGGTAC+GGG | - | chr6_2:60333348-60333367 | None:intergenic | 65.0% | |
| GAGAGATCCTGAGGCCGTGC+AGG | - | chr6_2:60333354-60333373 | None:intergenic | 65.0% | |
| ! | TGGTGGGCATGTAACGCCCG+AGG | - | chr6_2:60333445-60333464 | None:intergenic | 65.0% |
| AGGGGCCGAGGTTCGAACTC+CGG | + | chr6_2:60334659-60334678 | Msa0922160:intron | 65.0% | |
| ! | GGCAGGGGGAGAGTGTGAGC+TGG | - | chr6_2:60331305-60331324 | None:intergenic | 70.0% |
| TCCCGTACCTGCACGGCCTC+AGG | + | chr6_2:60333344-60333363 | Msa0922160:intron | 70.0% | |
| GATGAGGGCGGGGAGTGGTC+CGG | - | chr6_2:60333420-60333439 | None:intergenic | 70.0% | |
| AGGCTGATGAGGGCGGGGAG+TGG | - | chr6_2:60333425-60333444 | None:intergenic | 70.0% | |
| CTCCCCGCCCTCATCAGCCT+CGG | + | chr6_2:60333425-60333444 | Msa0922160:intron | 70.0% | |
| TCCCCGCCCTCATCAGCCTC+GGG | + | chr6_2:60333426-60333445 | Msa0922160:intron | 70.0% | |
| ACGCCCGAGGCTGATGAGGG+CGG | - | chr6_2:60333432-60333451 | None:intergenic | 70.0% | |
| GCCCGAGGCTGATGAGGGCG+GGG | - | chr6_2:60333430-60333449 | None:intergenic | 75.0% | |
| CGCCCGAGGCTGATGAGGGC+GGG | - | chr6_2:60333431-60333450 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 60325073 | 60337169 | 60325073 | ID=Msa0922160;Name=Msa0922160 |
| chr6_2 | mRNA | 60325073 | 60337169 | 60325073 | ID=Msa0922160-mRNA-1;Parent=Msa0922160;Name=Msa0922160-mRNA-1;_AED=0.01;_eAED=0.01;_QI=178|1|1|1|0.71|0.62|8|250|369 |
| chr6_2 | exon | 60325073 | 60325151 | 60325073 | ID=Msa0922160-mRNA-1:exon:9227;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60325194 | 60325254 | 60325194 | ID=Msa0922160-mRNA-1:exon:9228;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60325578 | 60326297 | 60325578 | ID=Msa0922160-mRNA-1:exon:9229;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60326651 | 60326727 | 60326651 | ID=Msa0922160-mRNA-1:exon:9230;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60327602 | 60327647 | 60327602 | ID=Msa0922160-mRNA-1:exon:9231;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60328552 | 60328672 | 60328552 | ID=Msa0922160-mRNA-1:exon:9232;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60336050 | 60336146 | 60336050 | ID=Msa0922160-mRNA-1:exon:9233;Parent=Msa0922160-mRNA-1 |
| chr6_2 | exon | 60336833 | 60337169 | 60336833 | ID=Msa0922160-mRNA-1:exon:9234;Parent=Msa0922160-mRNA-1 |
| chr6_2 | five_prime_UTR | 60325073 | 60325151 | 60325073 | ID=Msa0922160-mRNA-1:five_prime_utr;Parent=Msa0922160-mRNA-1 |
| chr6_2 | five_prime_UTR | 60325194 | 60325254 | 60325194 | ID=Msa0922160-mRNA-1:five_prime_utr;Parent=Msa0922160-mRNA-1 |
| chr6_2 | five_prime_UTR | 60325578 | 60325615 | 60325578 | ID=Msa0922160-mRNA-1:five_prime_utr;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60325616 | 60326297 | 60325616 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60326651 | 60326727 | 60326651 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60327602 | 60327647 | 60327602 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60328552 | 60328672 | 60328552 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60336050 | 60336146 | 60336050 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | CDS | 60336833 | 60336919 | 60336833 | ID=Msa0922160-mRNA-1:cds;Parent=Msa0922160-mRNA-1 |
| chr6_2 | three_prime_UTR | 60336920 | 60337169 | 60336920 | ID=Msa0922160-mRNA-1:three_prime_utr;Parent=Msa0922160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
