AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0922520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922520 MtrunA17_Chr6g0480581 98.755 241 2 1 1 240 1 241 0.0 495
Msa0922520 MtrunA17_Chr3g0125801 60.112 178 64 5 2 177 14 186 1.16e-61 195
Msa0922520 MtrunA17_Chr5g0417621 66.917 133 43 1 2 134 132 263 3.83e-59 192
Msa0922520 MtrunA17_Chr4g0042501 52.874 174 74 2 1 167 102 274 4.03e-59 192
Msa0922520 MtrunA17_Chr7g0254261 73.214 112 30 0 1 112 86 197 1.50e-56 184
Msa0922520 MtrunA17_Chr6g0460671 70.192 104 31 0 4 107 99 202 1.12e-50 168
Msa0922520 MtrunA17_Chr6g0460661 57.143 112 48 0 3 114 15 126 1.40e-44 147
Msa0922520 MtrunA17_Chr4g0008551 57.000 100 43 0 4 103 38 137 9.73e-39 137
Msa0922520 MtrunA17_Chr6g0454921 54.082 98 45 0 4 101 15 112 1.28e-35 125
Msa0922520 MtrunA17_Chr5g0401731 54.000 100 46 0 4 103 15 114 3.86e-35 127
Msa0922520 MtrunA17_Chr3g0133601 54.000 100 46 0 4 103 37 136 8.48e-34 121
Msa0922520 MtrunA17_Chr4g0053431 53.000 100 47 0 4 103 5 104 9.31e-34 122
Msa0922520 MtrunA17_Chr5g0437321 52.041 98 47 0 4 101 19 116 3.01e-33 121
Msa0922520 MtrunA17_Chr7g0238631 53.000 100 47 0 4 103 113 212 7.55e-32 122
Msa0922520 MtrunA17_Chr3g0139671 47.368 114 57 1 4 117 85 195 4.40e-31 120
Msa0922520 MtrunA17_Chr1g0157731 46.491 114 58 1 4 117 91 201 2.10e-30 119
Msa0922520 MtrunA17_Chr5g0429661 49.515 103 52 0 1 103 119 221 5.46e-29 112
Msa0922520 MtrunA17_Chr2g0309911 46.667 120 54 4 4 121 13 124 1.79e-27 107
Msa0922520 MtrunA17_Chr4g0022901 50.495 101 49 1 4 103 15 115 3.84e-27 105
Msa0922520 MtrunA17_Chr5g0435101 38.037 163 81 6 3 161 12 158 4.96e-27 103
Msa0922520 MtrunA17_Chr3g0117511 44.800 125 67 1 4 126 183 307 6.93e-27 107
Msa0922520 MtrunA17_Chr4g0058991 42.748 131 73 1 1 129 206 336 1.18e-26 107
Msa0922520 MtrunA17_Chr7g0228891 44.628 121 60 3 4 122 14 129 1.25e-26 103
Msa0922520 MtrunA17_Chr1g0203441 46.078 102 52 2 4 103 15 115 1.75e-26 103
Msa0922520 MtrunA17_Chr4g0022931 49.505 101 50 1 4 103 15 115 1.88e-26 103
Msa0922520 MtrunA17_Chr2g0323351 48.039 102 50 2 4 103 14 114 1.97e-26 102
Msa0922520 MtrunA17_Chr8g0342521 44.094 127 61 4 4 128 14 132 2.11e-26 104
Msa0922520 MtrunA17_Chr4g0055981 44.554 101 55 1 4 103 57 157 2.39e-26 102
Msa0922520 MtrunA17_Chr1g0187761 50.000 102 48 2 4 103 14 114 2.75e-26 102
Msa0922520 MtrunA17_Chr5g0397841 52.174 92 44 0 7 98 113 204 2.80e-26 105
Msa0922520 MtrunA17_Chr2g0311221 50.515 97 47 1 4 99 16 112 3.14e-26 103
Msa0922520 MtrunA17_Chr5g0397231 52.632 95 44 1 4 97 14 108 3.62e-26 103
Msa0922520 MtrunA17_Chr3g0115821 41.429 140 63 5 4 141 14 136 4.30e-26 103
Msa0922520 MtrunA17_Chr8g0342541 48.039 102 50 2 4 103 14 114 5.37e-26 103
Msa0922520 MtrunA17_Chr2g0330041 52.083 96 43 2 4 97 14 108 8.38e-26 103
Msa0922520 MtrunA17_Chr1g0203411 46.667 105 54 2 4 106 14 118 9.41e-26 102
Msa0922520 MtrunA17_Chr4g0022911 48.515 101 51 1 4 103 15 115 9.53e-26 102
Msa0922520 MtrunA17_Chr3g0103281 45.545 101 54 1 4 103 14 114 1.01e-25 102
Msa0922520 MtrunA17_Chr7g0274581 31.414 191 114 4 4 185 14 196 1.06e-25 99.8
Msa0922520 MtrunA17_Chr8g0360111 46.154 104 47 2 4 102 27 126 1.09e-25 101
Msa0922520 MtrunA17_Chr8g0387421 46.667 105 55 1 4 107 14 118 1.16e-25 102
Msa0922520 MtrunA17_Chr7g0228531 44.167 120 63 2 4 123 220 335 3.24e-25 102
Msa0922520 MtrunA17_Chr5g0410961 44.954 109 56 2 4 111 14 119 3.25e-25 101
Msa0922520 MtrunA17_Chr6g0452271 42.500 120 64 3 4 122 14 129 3.71e-25 101
Msa0922520 MtrunA17_Chr8g0342481 48.544 103 49 3 4 103 14 115 5.24e-25 101
Msa0922520 MtrunA17_Chr7g0270891 43.396 106 59 1 4 108 14 119 5.69e-25 101
Msa0922520 MtrunA17_Chr1g0167691 47.525 101 52 1 4 103 14 114 6.03e-25 99.0
Msa0922520 MtrunA17_Chr3g0131121 41.085 129 66 4 4 130 14 134 9.11e-25 99.4
Msa0922520 MtrunA17_Chr4g0058631 43.564 101 56 1 4 103 14 114 9.82e-25 100
Msa0922520 MtrunA17_Chr4g0048511 42.975 121 64 2 4 123 15 131 1.16e-24 100
Msa0922520 MtrunA17_Chr2g0281071 42.735 117 62 2 4 119 15 127 1.27e-24 100
Msa0922520 MtrunA17_Chr6g0470971 42.157 102 56 2 4 103 16 116 1.59e-24 98.6
Msa0922520 MtrunA17_Chr5g0395281 46.078 102 52 2 4 103 14 114 1.64e-24 99.0
Msa0922520 MtrunA17_Chr8g0349261 44.355 124 61 4 4 124 15 133 1.69e-24 99.0
Msa0922520 MtrunA17_Chr1g0193801 41.379 116 66 2 4 117 14 129 1.81e-24 100
Msa0922520 MtrunA17_Chr1g0211161 44.118 102 54 2 4 103 15 115 1.93e-24 97.1
Msa0922520 MtrunA17_Chr3g0117091 45.098 102 53 2 4 103 14 114 2.29e-24 99.4
Msa0922520 MtrunA17_Chr7g0261281 46.535 101 53 1 4 103 14 114 2.42e-24 97.8
Msa0922520 MtrunA17_Chr3g0099131 41.441 111 64 1 4 113 43 153 2.82e-24 100
Msa0922520 MtrunA17_Chr4g0039971 46.078 102 52 2 4 103 15 115 3.07e-24 99.0
Msa0922520 MtrunA17_Chr8g0334881 47.619 105 53 2 4 106 12 116 3.83e-24 98.2
Msa0922520 MtrunA17_Chr1g0193371 43.396 106 57 2 4 107 14 118 4.89e-24 98.6
Msa0922520 MtrunA17_Chr3g0088461 47.525 101 52 1 4 103 24 124 5.52e-24 98.2
Msa0922520 MtrunA17_Chr1g0194951 41.441 111 58 2 4 113 14 118 6.56e-24 98.2
Msa0922520 MtrunA17_Chr6g0453211 46.392 97 51 1 4 99 14 110 7.36e-24 97.4
Msa0922520 MtrunA17_Chr8g0354661 41.593 113 65 1 1 112 36 148 8.04e-24 99.4
Msa0922520 MtrunA17_Chr7g0271241 47.423 97 48 2 4 98 14 109 8.50e-24 98.2
Msa0922520 MtrunA17_Chr2g0323411 42.857 119 65 3 4 119 14 132 9.62e-24 97.4
Msa0922520 MtrunA17_Chr7g0217221 44.554 101 55 1 4 103 14 114 9.91e-24 96.3
Msa0922520 MtrunA17_Chr4g0032401 45.545 101 54 1 4 103 19 119 1.06e-23 97.4
Msa0922520 MtrunA17_Chr3g0080861 43.636 110 61 1 4 112 39 148 1.12e-23 99.0
Msa0922520 MtrunA17_Chr8g0343831 41.748 103 59 1 2 103 8 110 1.27e-23 95.5
Msa0922520 MtrunA17_Chr4g0022881 40.385 104 61 1 4 106 14 117 1.27e-23 95.1
Msa0922520 MtrunA17_Chr1g0192411 37.121 132 75 3 4 134 14 138 1.28e-23 98.2
Msa0922520 MtrunA17_Chr2g0328771 40.336 119 70 1 4 121 22 140 1.39e-23 96.7
Msa0922520 MtrunA17_Chr8g0385321 40.650 123 62 4 4 122 14 129 1.52e-23 96.7
Msa0922520 MtrunA17_Chr5g0434571 38.095 147 82 4 4 146 50 191 1.86e-23 97.1
Msa0922520 MtrunA17_Chr4g0037141 44.118 102 54 2 4 103 14 114 1.97e-23 95.5
Msa0922520 MtrunA17_Chr1g0167661 44.554 101 55 1 4 103 14 114 2.49e-23 94.7
Msa0922520 MtrunA17_Chr5g0434911 36.719 128 75 2 4 125 23 150 2.58e-23 95.1
Msa0922520 MtrunA17_Chr1g0154031 43.636 110 61 1 4 112 78 187 2.65e-23 97.1
Msa0922520 MtrunA17_Chr4g0068061 42.056 107 58 2 4 109 14 117 3.92e-23 95.9
Msa0922520 MtrunA17_Chr1g0180391 44.118 102 54 2 4 103 21 121 4.05e-23 93.6
Msa0922520 MtrunA17_Chr8g0346561 40.952 105 60 2 4 106 14 118 4.32e-23 95.1
Msa0922520 MtrunA17_Chr4g0044421 40.458 131 62 4 3 131 13 129 4.40e-23 92.8
Msa0922520 MtrunA17_Chr5g0417821 44.330 97 53 1 4 99 9 105 4.80e-23 94.7
Msa0922520 MtrunA17_Chr6g0453471 36.691 139 79 3 4 137 14 148 4.82e-23 95.9
Msa0922520 MtrunA17_Chr3g0135311 42.157 102 57 2 4 103 14 115 5.25e-23 95.5
Msa0922520 MtrunA17_Chr5g0400821 40.179 112 60 3 4 108 14 125 5.95e-23 94.7
Msa0922520 MtrunA17_Chr5g0440781 39.048 105 62 2 4 106 14 118 7.38e-23 92.0
Msa0922520 MtrunA17_Chr1g0151941 44.118 102 55 2 4 103 14 115 7.52e-23 93.6
Msa0922520 MtrunA17_Chr2g0327351 45.455 99 50 3 4 99 14 111 8.28e-23 94.7
Msa0922520 MtrunA17_Chr4g0060721 43.564 101 56 1 4 103 15 115 9.67e-23 94.7
Msa0922520 MtrunA17_Chr4g0022891 40.187 107 61 2 4 108 14 119 1.01e-22 92.8
Msa0922520 MtrunA17_Chr6g0450101 33.155 187 92 5 4 173 16 186 1.10e-22 92.0
Msa0922520 MtrunA17_Chr7g0275911 41.584 101 58 1 4 103 14 114 1.20e-22 92.8
Msa0922520 MtrunA17_Chr4g0070641 41.748 103 57 2 3 103 13 114 1.26e-22 90.9
Msa0922520 MtrunA17_Chr7g0228401 48.810 84 43 0 15 98 290 373 1.29e-22 95.9
Msa0922520 MtrunA17_Chr1g0168661 43.590 117 55 3 4 118 23 130 1.70e-22 92.8
Msa0922520 MtrunA17_Chr7g0220341 41.905 105 54 2 4 103 27 129 1.77e-22 92.8
Msa0922520 MtrunA17_Chr4g0070611 42.157 102 56 2 4 103 14 114 1.84e-22 93.6
Msa0922520 MtrunA17_Chr7g0228481 46.875 96 50 1 4 99 220 314 2.02e-22 94.7
Msa0922520 MtrunA17_Chr5g0441131 40.816 98 56 2 4 99 11 108 2.69e-22 90.5
Msa0922520 MtrunA17_Chr5g0434931 42.268 97 55 1 4 99 37 133 2.73e-22 92.4
Msa0922520 MtrunA17_Chr5g0440761 39.048 105 62 2 4 106 14 118 2.93e-22 92.0
Msa0922520 MtrunA17_Chr5g0441141 39.048 105 62 2 4 106 14 118 2.96e-22 92.4
Msa0922520 MtrunA17_Chr5g0434831 42.268 97 55 1 4 99 9 105 2.97e-22 90.5
Msa0922520 MtrunA17_Chr4g0042671 43.119 109 60 2 4 111 14 121 3.18e-22 94.0
Msa0922520 MtrunA17_Chr1g0152011 41.176 102 58 2 4 103 14 115 3.41e-22 93.2
Msa0922520 MtrunA17_Chr3g0110351 39.535 129 71 3 4 130 14 137 3.44e-22 92.8
Msa0922520 MtrunA17_Chr1g0186061 44.898 98 51 2 4 99 22 118 3.63e-22 91.7
Msa0922520 MtrunA17_Chr4g0030881 42.017 119 59 2 1 110 6 123 5.17e-22 91.3
Msa0922520 MtrunA17_Chr1g0209661 41.905 105 60 1 4 107 29 133 5.25e-22 92.4
Msa0922520 MtrunA17_Chr7g0228231 42.574 101 57 1 4 103 16 116 5.92e-22 90.1
Msa0922520 MtrunA17_Chr3g0121241 41.584 101 58 1 4 103 44 144 6.31e-22 92.0
Msa0922520 MtrunA17_Chr4g0072751 43.878 98 53 2 4 99 14 111 7.29e-22 92.4
Msa0922520 MtrunA17_Chr4g0013361 44.762 105 56 2 4 106 12 116 8.36e-22 91.7
Msa0922520 MtrunA17_Chr7g0228991 42.268 97 55 1 4 99 31 127 8.81e-22 90.9
Msa0922520 MtrunA17_Chr4g0054391 43.299 97 53 2 4 98 14 110 8.95e-22 91.3
Msa0922520 MtrunA17_Chr7g0247131 48.454 97 44 2 30 124 5 97 9.90e-22 90.9
Msa0922520 MtrunA17_Chr3g0092401 40.708 113 63 2 4 115 15 124 1.00e-21 91.7
Msa0922520 MtrunA17_Chr7g0254411 42.574 101 57 1 4 103 14 114 1.01e-21 92.0
Msa0922520 MtrunA17_Chr4g0057031 41.322 121 64 4 4 122 14 129 1.51e-21 90.5
Msa0922520 MtrunA17_Chr4g0028311 41.748 103 56 3 4 103 14 115 1.52e-21 91.3
Msa0922520 MtrunA17_Chr7g0240821 43.434 99 53 2 7 103 6 103 1.97e-21 89.4
Msa0922520 MtrunA17_Chr5g0434841 40.594 101 59 1 4 103 22 122 2.03e-21 90.9
Msa0922520 MtrunA17_Chr7g0264641 41.176 102 58 2 4 103 14 115 2.18e-21 90.1
Msa0922520 MtrunA17_Chr2g0322521 45.946 111 57 2 4 112 31 140 2.70e-21 91.3
Msa0922520 MtrunA17_Chr7g0217741 36.090 133 77 3 4 132 14 142 4.58e-21 89.7
Msa0922520 MtrunA17_Chr1g0194291 43.137 102 55 2 4 103 23 123 6.41e-21 88.6
Msa0922520 MtrunA17_Chr1g0194301 40.566 106 60 2 4 107 35 139 6.98e-21 88.6
Msa0922520 MtrunA17_Chr2g0327821 44.444 99 54 1 4 101 8 106 1.52e-20 87.0
Msa0922520 MtrunA17_Chr7g0233061 37.398 123 71 3 4 122 180 300 1.84e-20 88.6
Msa0922520 MtrunA17_Chr7g0238651 35.714 154 87 5 1 151 4 148 3.44e-20 87.8
Msa0922520 MtrunA17_Chr4g0068921 40.000 105 62 1 4 107 26 130 3.48e-20 85.1
Msa0922520 MtrunA17_Chr1g0177901 45.238 84 46 0 15 98 5 88 3.83e-20 85.5
Msa0922520 MtrunA17_Chr2g0293911 44.211 95 52 1 4 97 26 120 1.70e-18 82.8
Msa0922520 MtrunA17_Chr7g0269831 43.564 101 56 1 4 103 14 114 4.62e-18 82.0
Msa0922520 MtrunA17_Chr5g0416341 35.185 108 68 1 7 114 29 134 1.00e-17 81.6
Msa0922520 MtrunA17_Chr6g0487491 40.179 112 53 4 4 103 14 123 1.36e-17 79.3
Msa0922520 MtrunA17_Chr5g0425591 41.975 81 45 2 4 82 11 91 1.38e-17 75.5
Msa0922520 MtrunA17_Chr5g0434901 53.226 62 29 0 37 98 9 70 2.01e-17 75.5
Msa0922520 MtrunA17_Chr8g0362231 37.234 94 59 0 7 100 25 118 7.39e-17 79.0
Msa0922520 MtrunA17_Chr7g0229101 50.794 63 31 0 37 99 8 70 4.97e-16 74.3
Msa0922520 MtrunA17_Chr3g0093811 37.755 98 55 1 37 128 18 115 7.01e-16 74.7
Msa0922520 MtrunA17_Chr3g0099141 42.500 80 45 1 4 82 42 121 1.21e-15 71.6
Msa0922520 MtrunA17_Chr8g0342531 44.156 77 40 2 4 78 14 89 1.58e-15 72.0
Msa0922520 MtrunA17_Chr7g0229131 47.619 63 33 0 37 99 8 70 9.00e-15 70.1
Msa0922520 MtrunA17_Chr8g0342461 45.455 77 40 1 4 78 14 90 9.24e-15 69.3
Msa0922520 MtrunA17_Chr8g0342511 44.000 75 39 2 4 76 14 87 2.47e-14 67.0
Msa0922520 MtrunA17_Chr8g0342471 44.156 77 41 1 4 78 14 90 3.22e-14 67.8
Msa0922520 MtrunA17_Chr4g0042611 42.667 75 42 1 4 77 14 88 7.14e-14 65.5
Msa0922520 MtrunA17_Chr5g0395221 42.667 75 42 1 4 77 14 88 1.25e-13 64.7
Msa0922520 MtrunA17_Chr2g0323321 43.750 80 42 2 4 81 13 91 2.77e-13 64.3
Msa0922520 MtrunA17_Chr6g0483051 32.609 92 61 1 6 97 71 161 3.12e-13 68.6
Msa0922520 MtrunA17_Chr6g0483051 34.021 97 63 1 4 100 120 215 8.59e-11 61.6
Msa0922520 MtrunA17_Chr6g0453751 37.079 89 46 3 4 82 22 110 6.23e-13 63.9
Msa0922520 MtrunA17_Chr7g0274481 36.585 82 52 0 1 82 4 85 1.43e-11 63.9
Msa0922520 MtrunA17_Chr3g0104501 52.941 51 24 0 4 54 133 183 7.98e-11 59.7
Msa0922520 MtrunA17_Chr7g0233151 46.000 50 27 0 54 103 1 50 8.28e-11 59.3
Msa0922520 MtrunA17_Chr3g0104491 50.000 50 25 0 54 103 17 66 9.83e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922520 AT1G17950.1 55.144 243 96 6 1 232 2 242 4.35e-80 241
Msa0922520 AT1G73410.1 50.000 252 90 5 1 231 3 239 3.70e-70 215
Msa0922520 AT1G73410.2 82.727 110 19 0 1 110 3 112 1.07e-61 192
Msa0922520 AT4G33450.1 46.186 236 116 5 2 231 17 247 7.62e-61 192
Msa0922520 AT1G69560.1 65.468 139 45 2 2 137 105 243 1.05e-58 189
Msa0922520 AT1G69560.2 65.942 138 44 2 3 137 122 259 1.59e-58 189
Msa0922520 AT1G26780.1 68.254 126 34 1 1 120 95 220 4.85e-57 183
Msa0922520 AT1G26780.2 68.254 126 34 1 1 120 95 220 2.39e-56 184
Msa0922520 AT5G17800.1 72.897 107 29 0 1 107 90 196 3.75e-55 179
Msa0922520 AT3G29020.1 65.789 114 39 0 1 114 62 175 1.99e-53 172
Msa0922520 AT3G29020.2 65.789 114 39 0 1 114 64 177 7.77e-53 173
Msa0922520 AT5G39700.1 56.731 104 45 0 5 108 57 160 2.01e-38 132
Msa0922520 AT2G39880.1 52.778 108 51 0 4 111 50 157 2.53e-37 134
Msa0922520 AT3G50060.1 56.000 100 44 0 4 103 6 105 1.56e-36 130
Msa0922520 AT3G09230.1 53.448 116 52 1 4 117 55 170 3.88e-36 132
Msa0922520 AT3G55730.1 44.697 132 70 1 4 135 56 184 4.86e-36 132
Msa0922520 AT5G67300.1 56.000 100 44 0 4 103 6 105 1.56e-35 128
Msa0922520 AT3G09370.2 51.327 113 54 1 4 116 135 246 4.57e-33 125
Msa0922520 AT3G09370.3 51.327 113 54 1 4 116 143 254 4.71e-33 125
Msa0922520 AT3G09370.1 51.327 113 54 1 4 116 130 241 5.18e-33 125
Msa0922520 AT2G23290.1 52.000 100 48 0 4 103 13 112 6.18e-33 121
Msa0922520 AT4G37260.1 51.000 100 49 0 4 103 13 112 2.98e-32 120
Msa0922520 AT5G11510.5 39.716 141 80 2 4 142 81 218 8.61e-32 123
Msa0922520 AT5G11510.2 39.716 141 80 2 4 142 81 218 8.75e-32 123
Msa0922520 AT5G11510.3 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0922520 AT5G11510.1 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0922520 AT5G11510.4 39.716 141 80 2 4 142 81 218 9.78e-32 123
Msa0922520 AT5G02320.3 52.000 100 48 0 4 103 67 166 1.69e-31 120
Msa0922520 AT5G02320.1 52.000 100 48 0 4 103 127 226 1.87e-31 121
Msa0922520 AT5G02320.2 52.000 100 48 0 4 103 127 226 1.87e-31 121
Msa0922520 AT4G32730.1 45.690 116 60 1 4 119 87 199 2.51e-31 121
Msa0922520 AT4G32730.5 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0922520 AT4G32730.4 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0922520 AT4G32730.3 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0922520 AT4G32730.2 45.690 116 60 1 4 119 87 199 2.55e-31 122
Msa0922520 AT5G40360.1 46.364 110 59 0 1 110 155 264 7.52e-30 114
Msa0922520 AT1G18570.1 41.007 139 72 4 4 138 15 147 3.79e-28 110
Msa0922520 AT3G12720.1 53.608 97 42 2 4 98 24 119 5.18e-28 108
Msa0922520 AT5G54230.1 49.485 97 48 1 4 99 14 110 6.01e-28 108
Msa0922520 AT3G27785.1 48.598 107 55 0 4 110 189 295 6.89e-28 110
Msa0922520 AT5G14750.1 46.535 101 53 1 4 103 18 118 1.17e-27 105
Msa0922520 AT3G23250.1 48.148 108 54 2 4 110 14 120 1.45e-27 107
Msa0922520 AT5G40330.1 46.535 101 53 1 4 103 14 114 1.48e-27 105
Msa0922520 AT4G26930.1 36.364 165 83 4 4 164 21 167 2.01e-27 108
Msa0922520 AT2G26960.1 44.144 111 61 1 3 112 21 131 1.16e-26 107
Msa0922520 AT1G74080.1 36.646 161 87 5 4 157 14 166 1.17e-26 105
Msa0922520 AT2G25230.1 42.308 104 58 2 6 108 28 130 1.46e-26 103
Msa0922520 AT4G25560.1 48.039 102 50 2 4 103 12 112 1.80e-26 103
Msa0922520 AT3G27920.1 45.545 101 54 1 4 103 16 116 2.63e-26 102
Msa0922520 AT3G13890.2 51.579 95 45 1 4 97 14 108 6.13e-26 103
Msa0922520 AT5G58850.1 46.667 105 56 0 4 108 105 209 6.19e-26 105
Msa0922520 AT1G63910.1 45.536 112 60 1 4 114 14 125 7.31e-26 103
Msa0922520 AT4G28110.1 48.454 97 49 1 4 99 14 110 1.11e-25 102
Msa0922520 AT3G11440.2 41.818 110 63 1 4 112 43 152 1.15e-25 104
Msa0922520 AT5G55020.1 42.478 113 64 1 1 112 25 137 1.52e-25 104
Msa0922520 AT5G65230.1 46.078 102 52 2 4 103 14 114 1.78e-25 102
Msa0922520 AT1G79180.1 46.535 101 53 1 4 103 16 116 1.99e-25 101
Msa0922520 AT3G48920.1 47.917 96 49 1 4 98 20 115 2.11e-25 100
Msa0922520 AT3G11440.3 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0922520 AT3G11440.4 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0922520 AT3G11440.1 41.818 110 63 1 4 112 43 152 2.18e-25 104
Msa0922520 AT5G06100.1 42.727 110 62 1 4 112 34 143 2.27e-25 103
Msa0922520 AT4G05100.1 44.444 117 60 3 4 119 15 127 2.31e-25 102
Msa0922520 AT4G18770.1 48.000 100 52 0 4 103 217 316 2.79e-25 103
Msa0922520 AT5G06100.5 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0922520 AT5G06100.2 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0922520 AT5G06100.3 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0922520 AT5G06100.4 42.727 110 62 1 4 112 34 143 4.23e-25 103
Msa0922520 AT5G62470.1 39.552 134 77 2 4 136 14 144 4.40e-25 101
Msa0922520 AT2G32460.2 45.045 111 58 2 4 112 8 117 5.37e-25 102
Msa0922520 AT2G32460.1 45.045 111 58 2 4 112 20 129 5.56e-25 102
Msa0922520 AT3G53200.1 46.939 98 49 2 4 99 11 107 5.83e-25 99.0
Msa0922520 AT2G26950.1 38.261 115 62 2 3 112 17 127 6.29e-25 101
Msa0922520 AT2G31180.1 47.525 101 52 1 4 103 14 114 6.59e-25 99.4
Msa0922520 AT5G52600.1 47.959 98 48 2 4 99 14 110 6.59e-25 98.2
Msa0922520 AT5G11050.1 44.762 105 58 0 4 108 105 209 7.04e-25 102
Msa0922520 AT3G13890.1 48.077 104 44 2 4 97 14 117 7.77e-25 101
Msa0922520 AT4G01680.3 43.396 106 59 1 4 108 14 119 8.59e-25 98.6
Msa0922520 AT3G01140.2 45.545 101 54 1 4 103 14 114 1.41e-24 100
Msa0922520 AT3G30210.1 46.392 97 51 1 2 97 27 123 1.75e-24 98.6
Msa0922520 AT3G02940.2 47.423 97 50 1 4 99 14 110 2.01e-24 99.4
Msa0922520 AT3G61250.1 50.000 98 46 2 4 99 14 110 2.11e-24 99.0
Msa0922520 AT1G57560.1 37.908 153 75 6 4 143 14 159 2.14e-24 99.4
Msa0922520 AT5G10280.1 45.098 102 53 2 4 103 14 114 2.17e-24 99.4
Msa0922520 AT3G01140.1 45.545 101 54 1 4 103 57 157 2.19e-24 100
Msa0922520 AT5G23000.1 46.602 103 51 3 4 103 14 115 2.20e-24 99.4
Msa0922520 AT4G00540.2 45.631 103 53 1 4 103 103 205 2.41e-24 100
Msa0922520 AT4G38620.1 34.463 177 88 7 4 159 14 183 2.42e-24 98.6
Msa0922520 AT3G13540.1 35.252 139 88 2 4 140 25 163 2.46e-24 97.8
Msa0922520 AT4G01680.1 43.396 106 59 1 4 108 14 119 2.63e-24 99.4
Msa0922520 AT2G16720.1 38.000 150 79 5 4 146 14 156 2.87e-24 97.8
Msa0922520 AT1G57560.2 36.620 142 79 4 4 141 14 148 3.10e-24 98.2
Msa0922520 AT3G02940.1 47.423 97 50 1 4 99 14 110 3.37e-24 99.0
Msa0922520 AT3G02940.3 47.423 97 50 1 4 99 14 110 3.37e-24 99.0
Msa0922520 AT5G61420.2 35.714 154 92 3 4 154 14 163 3.38e-24 99.4
Msa0922520 AT1G74430.1 44.554 101 55 1 4 103 14 114 3.62e-24 97.8
Msa0922520 AT5G60890.1 40.152 132 70 4 4 133 14 138 4.56e-24 97.8
Msa0922520 AT5G56110.1 45.545 101 54 1 4 103 14 114 4.70e-24 98.2
Msa0922520 AT4G00540.1 45.631 103 53 1 4 103 101 203 4.87e-24 99.8
Msa0922520 AT5G15310.4 44.554 101 55 1 4 103 14 114 4.91e-24 96.7
Msa0922520 AT2G47460.1 30.144 209 135 4 4 201 14 222 5.41e-24 99.0
Msa0922520 AT5G07690.1 44.118 102 56 1 4 104 14 115 5.49e-24 98.6
Msa0922520 AT5G62470.2 40.441 136 74 4 4 136 14 145 5.80e-24 98.6
Msa0922520 AT5G07700.1 41.935 124 67 2 4 126 14 133 5.93e-24 98.6
Msa0922520 AT5G07700.2 41.935 124 67 2 4 126 14 133 5.93e-24 98.6
Msa0922520 AT1G35515.1 36.800 125 70 3 4 125 14 132 5.95e-24 95.9
Msa0922520 AT1G22640.1 37.143 140 73 4 4 135 14 146 6.34e-24 96.7
Msa0922520 AT5G12870.1 45.545 101 54 1 4 103 20 120 6.38e-24 97.4
Msa0922520 AT4G17785.2 46.000 100 51 2 4 101 15 113 7.89e-24 98.2
Msa0922520 AT5G15310.1 44.554 101 55 1 4 103 14 114 8.38e-24 97.8
Msa0922520 AT3G12820.1 46.078 102 52 2 4 103 16 116 9.33e-24 95.9
Msa0922520 AT4G17785.1 46.000 100 51 2 4 101 15 113 9.49e-24 98.2
Msa0922520 AT5G15310.2 44.554 101 55 1 4 103 14 114 1.01e-23 97.4
Msa0922520 AT5G14340.1 47.059 102 51 2 4 103 26 126 1.12e-23 96.7
Msa0922520 AT5G16770.4 41.026 117 64 2 4 119 14 126 1.13e-23 97.4
Msa0922520 AT5G16770.3 41.026 117 64 2 4 119 14 126 1.13e-23 97.4
Msa0922520 AT3G49690.1 41.071 112 62 3 4 111 14 125 1.62e-23 96.7
Msa0922520 AT5G57620.1 41.284 109 62 2 4 110 14 122 1.69e-23 97.1
Msa0922520 AT5G16770.1 41.026 117 64 2 4 119 14 126 1.74e-23 97.1
Msa0922520 AT5G16770.2 41.026 117 64 2 4 119 14 126 1.74e-23 97.1
Msa0922520 AT4G21440.1 46.392 97 51 1 4 99 14 110 2.30e-23 97.1
Msa0922520 AT5G35550.1 43.478 115 59 3 4 116 16 126 2.42e-23 95.1
Msa0922520 AT5G26660.1 41.880 117 64 3 4 117 14 129 2.71e-23 96.7
Msa0922520 AT5G49330.1 42.342 111 57 2 4 113 14 118 3.03e-23 96.7
Msa0922520 AT1G09540.1 42.991 107 58 2 4 108 14 119 3.52e-23 96.7
Msa0922520 AT1G18710.1 38.843 121 69 2 4 123 14 130 3.63e-23 95.1
Msa0922520 AT3G28470.1 47.423 97 50 1 4 99 14 110 3.75e-23 95.9
Msa0922520 AT5G52260.1 47.059 102 51 2 4 103 14 114 3.81e-23 95.1
Msa0922520 AT1G06180.1 46.078 102 52 2 4 103 14 114 3.87e-23 94.4
Msa0922520 AT3G28910.1 44.554 101 55 1 4 103 14 114 5.54e-23 95.5
Msa0922520 AT4G01680.2 40.678 118 57 2 4 108 14 131 6.43e-23 95.9
Msa0922520 AT1G74650.1 43.564 101 56 1 4 103 14 114 7.54e-23 95.1
Msa0922520 AT3G60460.1 45.714 105 55 2 4 106 13 117 7.56e-23 94.7
Msa0922520 AT4G34990.1 39.344 122 65 3 4 122 14 129 9.09e-23 94.0
Msa0922520 AT1G34670.1 43.564 101 56 1 4 103 14 114 1.13e-22 95.1
Msa0922520 AT1G56160.1 43.137 102 55 2 4 103 16 116 1.88e-22 93.6
Msa0922520 AT3G08500.1 45.545 101 54 1 4 103 32 132 1.92e-22 94.4
Msa0922520 AT5G16600.1 40.496 121 65 3 4 122 14 129 2.20e-22 94.0
Msa0922520 AT3G01530.1 45.098 102 53 2 4 103 27 127 2.37e-22 91.3
Msa0922520 AT2G36890.1 41.935 124 65 4 4 124 14 133 2.41e-22 93.2
Msa0922520 AT5G65790.1 43.689 103 54 3 4 103 14 115 2.51e-22 94.4
Msa0922520 AT4G09460.1 39.604 101 60 1 4 103 14 114 3.01e-22 92.0
Msa0922520 AT5G14750.3 42.342 111 58 4 35 142 16 123 3.37e-22 90.1
Msa0922520 AT3G47600.1 44.118 102 54 2 4 103 14 114 3.49e-22 93.6
Msa0922520 AT2G36890.2 41.935 124 65 4 4 124 55 174 4.03e-22 93.6
Msa0922520 AT1G16490.1 43.564 101 56 1 4 103 16 116 1.01e-21 91.3
Msa0922520 AT4G12350.1 42.857 105 57 2 1 103 11 114 1.09e-21 91.3
Msa0922520 AT1G66230.1 39.669 121 66 3 4 122 14 129 1.72e-21 90.9
Msa0922520 AT5G40350.1 41.284 109 58 2 4 111 19 122 2.43e-21 89.0
Msa0922520 AT5G40430.1 31.944 144 92 3 2 140 52 194 2.71e-21 89.7
Msa0922520 AT3G62610.1 41.584 101 58 1 4 103 14 114 3.62e-21 90.9
Msa0922520 AT3G27810.1 42.056 107 56 2 4 109 22 123 4.06e-21 88.6
Msa0922520 AT3G24310.1 46.875 96 48 2 4 97 20 114 4.33e-21 89.4
Msa0922520 AT1G08810.1 42.574 101 57 1 4 103 14 114 5.77e-21 89.4
Msa0922520 AT5G59780.3 41.509 106 61 1 4 108 10 115 5.88e-21 88.6
Msa0922520 AT3G46130.1 42.453 106 60 1 4 108 11 116 6.20e-21 89.0
Msa0922520 AT4G13480.1 46.875 96 48 2 4 97 8 102 6.27e-21 89.0
Msa0922520 AT1G79180.2 36.296 135 50 2 4 103 16 149 7.10e-21 89.7
Msa0922520 AT1G48000.1 44.211 95 52 1 4 97 34 128 8.66e-21 88.2
Msa0922520 AT2G47190.1 43.137 102 55 2 4 103 22 122 1.46e-20 88.2
Msa0922520 AT1G66370.1 39.815 108 60 2 4 108 10 115 2.46e-20 87.0
Msa0922520 AT1G25340.2 39.423 104 59 1 4 107 20 119 3.03e-20 87.4
Msa0922520 AT1G68320.1 41.509 106 59 2 4 107 21 125 3.66e-20 87.4
Msa0922520 AT1G25340.1 39.048 105 63 1 4 107 20 124 3.69e-20 87.0
Msa0922520 AT1G25340.3 39.423 104 59 1 4 107 20 119 4.20e-20 87.4
Msa0922520 AT4G37780.1 38.235 102 61 2 4 103 14 115 4.90e-20 87.0
Msa0922520 AT1G66380.1 41.748 103 55 2 4 103 10 110 1.82e-19 82.0
Msa0922520 AT4G22680.1 38.843 121 67 4 4 122 14 129 2.00e-19 84.7
Msa0922520 AT3G53200.2 53.968 63 29 0 37 99 12 74 2.73e-19 83.2
Msa0922520 AT5G49620.1 45.263 95 51 1 4 97 28 122 4.63e-19 84.7
Msa0922520 AT3G12820.2 52.239 67 32 0 37 103 2 68 1.06e-18 81.3
Msa0922520 AT3G06490.1 42.157 102 56 2 4 103 21 121 1.67e-18 83.2
Msa0922520 AT5G35550.2 48.750 80 38 1 37 116 53 129 1.80e-18 82.0
Msa0922520 AT2G02820.3 37.037 108 66 1 7 114 33 138 2.32e-18 82.8
Msa0922520 AT2G02820.1 37.037 108 66 1 7 114 33 138 3.76e-18 83.2
Msa0922520 AT1G56650.1 39.286 112 67 1 4 114 10 121 4.39e-18 80.9
Msa0922520 AT2G02820.2 37.037 108 66 1 7 114 33 138 5.47e-18 82.8
Msa0922520 AT5G62320.1 42.202 109 53 3 4 103 15 122 8.12e-18 80.1
Msa0922520 AT5G40350.2 48.000 75 34 1 37 111 8 77 1.35e-17 77.8
Msa0922520 AT1G66390.1 40.777 103 56 2 4 103 10 110 1.61e-17 79.3
Msa0922520 AT5G59780.2 48.611 72 37 0 37 108 23 94 2.06e-17 78.6
Msa0922520 AT3G27810.2 49.315 73 32 1 37 109 7 74 2.36e-17 77.4
Msa0922520 AT5G26660.2 45.122 82 44 1 37 117 17 98 2.58e-17 80.1
Msa0922520 AT3G46130.3 48.611 72 37 0 37 108 13 84 2.69e-17 78.2
Msa0922520 AT3G18100.3 38.298 94 58 0 4 97 498 591 3.55e-17 80.9
Msa0922520 AT3G46130.4 48.611 72 37 0 37 108 23 94 3.66e-17 78.2
Msa0922520 AT3G18100.1 38.298 94 58 0 4 97 546 639 3.71e-17 80.9
Msa0922520 AT3G18100.4 38.298 94 58 0 4 97 385 478 4.27e-17 80.5
Msa0922520 AT3G18100.2 37.113 97 61 0 4 100 333 429 4.79e-17 80.5
Msa0922520 AT1G14350.2 39.362 94 57 0 7 100 28 121 5.47e-17 79.7
Msa0922520 AT1G14350.1 39.362 94 57 0 7 100 28 121 5.47e-17 79.7
Msa0922520 AT2G37630.1 33.333 147 85 4 1 144 1 137 3.91e-16 77.0
Msa0922520 AT5G49620.2 39.450 109 51 2 4 97 28 136 1.24e-15 75.1
Msa0922520 AT3G47600.2 49.254 67 34 0 37 103 42 108 1.49e-15 75.1
Msa0922520 AT3G23250.2 50.000 64 31 1 47 110 1 63 1.66e-14 70.9
Msa0922520 AT1G66380.3 47.761 67 35 0 37 103 11 77 1.99e-14 67.8
Msa0922520 AT5G14750.4 47.368 57 30 0 47 103 1 57 2.74e-14 68.2
Msa0922520 AT5G14750.2 47.368 57 30 0 47 103 1 57 2.74e-14 68.2
Msa0922520 AT1G22640.3 35.789 95 49 2 47 135 1 89 5.71e-13 65.9
Msa0922520 AT1G71030.2 40.625 64 38 0 40 103 5 68 6.77e-12 62.8
Msa0922520 AT1G71030.1 40.625 64 38 0 40 103 19 82 8.59e-12 62.8
Msa0922520 AT1G09770.1 36.585 82 52 0 1 82 4 85 1.98e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTCCTATTCTTGAATT+AGG 0.083132 6_2:-61159629 Msa0922520:five_prime_UTR
GAAAGTGAAACTTGGGAAAT+TGG 0.209450 6_2:+61157250 None:intergenic
AGCATTGTGGAACAAGAATT+TGG 0.234542 6_2:+61157222 None:intergenic
TTTCCCAAGTTTCACTTTCA+TGG 0.262907 6_2:-61157246 Msa0922520:CDS
TAATTCCTATTCTTGAATTA+GGG 0.290578 6_2:-61159628 Msa0922520:five_prime_UTR
AATGGATTTCTGTTTATTCT+TGG 0.293651 6_2:+61157570 None:intergenic
ATCGGATTCATGGTAATAGA+TGG 0.342594 6_2:-61157512 Msa0922520:CDS
ATAACTTCTCATCGGATTCA+TGG 0.353013 6_2:-61157522 Msa0922520:CDS
AATCATAGAACTCAATTGAT+TGG 0.354461 6_2:+61155514 None:intergenic
AAAGCTATGGACCTCATAAT+TGG 0.364887 6_2:-61159474 Msa0922520:CDS
GTTGAGATGGTTCAATCAAT+TGG 0.365948 6_2:-61157595 Msa0922520:CDS
AGACATGGGAAGAGAATATA+TGG 0.367108 6_2:+61159833 None:intergenic
GCAACTATGTTGGCAACTTC+CGG 0.370628 6_2:+61155362 None:intergenic
AAGAAAAGTTGAAGATGAAA+AGG 0.389215 6_2:+61159749 None:intergenic
TCTTCTTCTTCCTCCGTGAA+TGG 0.390044 6_2:+61157552 None:intergenic
GGAAGTCAATCAAGATGTTA+TGG 0.394645 6_2:-61155433 Msa0922520:CDS
AAGTTTGTTTGATGATCATT+TGG 0.397165 6_2:+61157351 None:intergenic
TCTTGTTCCACAATGCTTCA+AGG 0.407745 6_2:-61157216 Msa0922520:intron
CATCTGAGGATGAGAAGCTT+AGG 0.415499 6_2:-61159507 Msa0922520:CDS
TCAAGCTCAATTCATACAAA+TGG 0.418278 6_2:+61155319 None:intergenic
AGAAACCCTAATTCAAGAAT+AGG 0.419756 6_2:+61159623 None:intergenic
TTAGAACAATATCTCGATCT+AGG 0.424727 6_2:-61155292 Msa0922520:three_prime_UTR
TACAGCATTATCAGTCCGTC+CGG 0.437863 6_2:+61157467 None:intergenic
ATAATGCTGTAAAGAATCAT+TGG 0.449918 6_2:-61157455 Msa0922520:CDS
TGAGAAGCTTAGGGAGTTGG+TGG 0.459888 6_2:-61159497 Msa0922520:CDS
TGGACCATGAAAGTGAAACT+TGG 0.467936 6_2:+61157242 None:intergenic
AAACTATAGGTGAAGAGGAT+AGG 0.470701 6_2:-61159662 Msa0922520:five_prime_UTR
GAAAATCTCCGAGGAAGATC+AGG 0.471533 6_2:-61159439 Msa0922520:intron
AGAAAAGTTGAAGATGAAAA+GGG 0.475477 6_2:+61159750 None:intergenic
GGAAAAGTTGTAGGTTGAGA+TGG 0.483490 6_2:-61157608 Msa0922520:CDS
ACACACATATAATGTATTCA+AGG 0.484874 6_2:-61155232 Msa0922520:three_prime_UTR
GGAGAAAACTATAGGTGAAG+AGG 0.485091 6_2:-61159667 Msa0922520:five_prime_UTR
GGATGAGAAGCTTAGGGAGT+TGG 0.485907 6_2:-61159500 Msa0922520:CDS
GCTATGGCGTTCCAATTATG+AGG 0.499293 6_2:+61159463 None:intergenic
AAAGGGATATATATAAGAAA+AGG 0.512562 6_2:+61159767 None:intergenic
TGGCGAGGATTCGTCGAGAA+AGG 0.513383 6_2:-61157422 Msa0922520:CDS
ACAATATTGAAGACAAGAAG+TGG 0.516684 6_2:+61159806 None:intergenic
AGCAAGAGGGAGAAAACTAT+AGG 0.521411 6_2:-61159675 Msa0922520:five_prime_UTR
AGGGAGTTGGTGGAAAGCTA+TGG 0.521525 6_2:-61159487 Msa0922520:CDS
GCTCAATTCATACAAATGGT+TGG 0.524472 6_2:+61155323 None:intergenic
AGGTATAAGATCTATGCAAA+AGG 0.527507 6_2:-61157402 Msa0922520:CDS
ATCTGAGGATGAGAAGCTTA+GGG 0.530955 6_2:-61159506 Msa0922520:CDS
CTAAGCTTCTCATCCTCAGA+TGG 0.534492 6_2:+61159508 None:intergenic
ACAGCATTATCAGTCCGTCC+GGG 0.534922 6_2:+61157468 None:intergenic
GGACCATGAAAGTGAAACTT+GGG 0.536416 6_2:+61157243 None:intergenic
AAAATTGTGTGATGATCAAG+AGG 0.537064 6_2:+61157378 None:intergenic
CATCCTCAGATGGTCTCCAA+TGG 0.553569 6_2:+61159518 None:intergenic
GAATCATTGGCATGTGATGA+TGG 0.556027 6_2:-61157442 Msa0922520:CDS
AATAAACAGAAATCCATTCA+CGG 0.562387 6_2:-61157565 Msa0922520:CDS
TATATTAATATGTGTAGTAG+AGG 0.574832 6_2:-61159541 Msa0922520:exon
TCGGATTCATGGTAATAGAT+GGG 0.582541 6_2:-61157511 Msa0922520:CDS
ATATGTGTAGTAGAGGCCAT+TGG 0.582916 6_2:-61159534 Msa0922520:CDS
AGCGTCTTATAACTTCTCAT+CGG 0.584568 6_2:-61157530 Msa0922520:CDS
AGATGTACCTTGAAGCATTG+TGG 0.585558 6_2:+61157209 None:intergenic
GGGAAGAGAATATATGGTGG+GGG 0.588730 6_2:+61159839 None:intergenic
ATGGGAAGAGAATATATGGT+GGG 0.590124 6_2:+61159837 None:intergenic
GATACTTCTCAACAAAAGAG+TGG 0.604960 6_2:+61157313 None:intergenic
ATCATATAGATCAAAGCAAG+AGG 0.608293 6_2:-61159689 Msa0922520:five_prime_UTR
ACAAGAAGTGGAAAGAGACA+TGG 0.608601 6_2:+61159818 None:intergenic
TGATCTATATGATCAACTCA+AGG 0.608924 6_2:+61159699 None:intergenic
CAAGAAGTGGAAAGAGACAT+GGG 0.611099 6_2:+61159819 None:intergenic
TTGCAAGACACTTCCCCGGA+CGG 0.617624 6_2:-61157482 Msa0922520:CDS
CAGCATTATCAGTCCGTCCG+GGG 0.621205 6_2:+61157469 None:intergenic
AGGCCATTGGAGACCATCTG+AGG 0.626741 6_2:-61159521 Msa0922520:CDS
TAATGCTAGAAGAGATGATG+AGG 0.631566 6_2:-61155454 Msa0922520:CDS
TGGGAAGAGAATATATGGTG+GGG 0.636808 6_2:+61159838 None:intergenic
AAGAGCTATGTGAGACACGA+GGG 0.644268 6_2:+61157274 None:intergenic
GTAATTGCAAGACACTTCCC+CGG 0.647060 6_2:-61157486 Msa0922520:CDS
TGTTATGGAACTGAAGAACA+AGG 0.658552 6_2:-61155418 Msa0922520:CDS
CATGGGAAGAGAATATATGG+TGG 0.663893 6_2:+61159836 None:intergenic
TCATATAGATCAAAGCAAGA+GGG 0.678055 6_2:-61159688 Msa0922520:five_prime_UTR
ATTGGCATGTGATGATGGCG+AGG 0.687951 6_2:-61157437 Msa0922520:CDS
GATTCATGGTAATAGATGGG+CGG 0.709335 6_2:-61157508 Msa0922520:CDS
AAAGAGCTATGTGAGACACG+AGG 0.711201 6_2:+61157273 None:intergenic
AAACAGAAATCCATTCACGG+AGG 0.757168 6_2:-61157562 Msa0922520:CDS
GCCATAGCTGAAAATCTCCG+AGG 0.757333 6_2:-61159448 Msa0922520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTTATTAAAAAAAT+TGG + chr6_2:61156468-61156487 None:intergenic 0.0%
!! ATAAATAAGAATAATTGATA+TGG + chr6_2:61156173-61156192 None:intergenic 10.0%
!! TTTAATCAATATTATATTTG+GGG - chr6_2:61156547-61156566 Msa0922520:intron 10.0%
!!! AATTGATTAAATATTTTTCT+AGG - chr6_2:61156864-61156883 Msa0922520:intron 10.0%
!!! ATTGATTAAATATTTTTCTA+GGG - chr6_2:61156865-61156884 Msa0922520:intron 10.0%
!!! TTTTTTTACTAATAATCTTA+GGG + chr6_2:61158136-61158155 None:intergenic 10.0%
!!! TTTTTTTTACTAATAATCTT+AGG + chr6_2:61158137-61158156 None:intergenic 10.0%
!!! AATAGAATAATTTTTTAAGA+GGG + chr6_2:61158229-61158248 None:intergenic 10.0%
!!! AAATAGAATAATTTTTTAAG+AGG + chr6_2:61158230-61158249 None:intergenic 10.0%
!!! ATTTTATTTTGGTTTTTTAA+CGG + chr6_2:61158779-61158798 None:intergenic 10.0%
!! AAAACCAAAATAAAATATTA+TGG - chr6_2:61158783-61158802 Msa0922520:intron 10.0%
!!! TTATTGTAATTTTTTTAGCT+AGG - chr6_2:61155447-61155466 Msa0922520:CDS 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr6_2:61156001-61156020 None:intergenic 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG + chr6_2:61156087-61156106 None:intergenic 15.0%
!! TTCTTAAAAAAAAAAACAAG+AGG + chr6_2:61156139-61156158 None:intergenic 15.0%
!!! AATTTAGATCCAAAATTTTA+GGG + chr6_2:61156322-61156341 None:intergenic 15.0%
!!! AAATTTAGATCCAAAATTTT+AGG + chr6_2:61156323-61156342 None:intergenic 15.0%
!! AAAAAAAGAGGAAAATATTA+GGG + chr6_2:61156387-61156406 None:intergenic 15.0%
!! AAAAAAAAGAGGAAAATATT+AGG + chr6_2:61156388-61156407 None:intergenic 15.0%
!! TAGTTTATTTGATAAATTGT+GGG - chr6_2:61156685-61156704 Msa0922520:intron 15.0%
!! CATATATAATATTTCTCTTT+GGG + chr6_2:61156780-61156799 None:intergenic 15.0%
!! TCTAGTTAATTGATTAAATT+TGG - chr6_2:61156826-61156845 Msa0922520:intron 15.0%
!! ACAAATGTAAAAAAATTTGT+AGG - chr6_2:61156916-61156935 Msa0922520:intron 15.0%
!! CAAATGTAAAAAAATTTGTA+GGG - chr6_2:61156917-61156936 Msa0922520:intron 15.0%
!! AAATAAATGATTTATTGAGA+TGG - chr6_2:61157058-61157077 Msa0922520:intron 15.0%
!! TTATTTAATCCAACATTATA+AGG - chr6_2:61157183-61157202 Msa0922520:intron 15.0%
!! CAAATTAAACTTATAAATCA+AGG + chr6_2:61157341-61157360 None:intergenic 15.0%
!!! ATTTTGTCTTGAATTTTATT+AGG - chr6_2:61157385-61157404 Msa0922520:CDS 15.0%
!!! TTTTGTCTTGAATTTTATTA+GGG - chr6_2:61157386-61157405 Msa0922520:CDS 15.0%
!! TTATATTGAAGTCATATATA+GGG + chr6_2:61157843-61157862 None:intergenic 15.0%
!! TTTATATTGAAGTCATATAT+AGG + chr6_2:61157844-61157863 None:intergenic 15.0%
!!! TGATGTTATAGTATTAATTT+TGG + chr6_2:61157937-61157956 None:intergenic 15.0%
!! AAATTAATACTATAACATCA+AGG - chr6_2:61157937-61157956 Msa0922520:intron 15.0%
!! TAAATTAAAGAAAGTTCAAT+AGG - chr6_2:61157998-61158017 Msa0922520:intron 15.0%
!! TCAACAAAAATTAATGTATT+TGG + chr6_2:61158691-61158710 None:intergenic 15.0%
!!! TCAATTTTTACTTACATTTT+AGG - chr6_2:61158711-61158730 Msa0922520:intron 15.0%
!!! ACAACCATAATATTTTATTT+TGG + chr6_2:61158790-61158809 None:intergenic 15.0%
!! AAGTATATGAAGAAAAAAAA+GGG + chr6_2:61159097-61159116 None:intergenic 15.0%
!!! TATATATACCAATTTTCTAA+TGG - chr6_2:61159427-61159446 Msa0922520:intron 15.0%
!! AAAGGGATATATATAAGAAA+AGG + chr6_2:61155251-61155270 None:intergenic 20.0%
!! ATAATTCCTATTCTTGAATT+AGG - chr6_2:61155386-61155405 Msa0922520:CDS 20.0%
!! TAATTCCTATTCTTGAATTA+GGG - chr6_2:61155387-61155406 Msa0922520:CDS 20.0%
!! TATATTAATATGTGTAGTAG+AGG - chr6_2:61155474-61155493 Msa0922520:CDS 20.0%
!! AAAAAAAAAAACAAGAGGAT+AGG + chr6_2:61156134-61156153 None:intergenic 20.0%
!!! AAATTTAGAGCCAAAATTTT+AGG + chr6_2:61156275-61156294 None:intergenic 20.0%
!!! GTGTTTAGAATAAATAAAGA+GGG + chr6_2:61156597-61156616 None:intergenic 20.0%
!!! TGTGTTTAGAATAAATAAAG+AGG + chr6_2:61156598-61156617 None:intergenic 20.0%
!! GTAGTTTATTTGATAAATTG+TGG - chr6_2:61156684-61156703 Msa0922520:intron 20.0%
!! GCATATATAATATTTCTCTT+TGG + chr6_2:61156781-61156800 None:intergenic 20.0%
!! AATTAACTAGATTATTTACC+CGG + chr6_2:61156817-61156836 None:intergenic 20.0%
!! TTATTTGATGTGTTCAATAA+AGG + chr6_2:61157044-61157063 None:intergenic 20.0%
!! ATATAAGAATGATAATTTGG+TGG + chr6_2:61157317-61157336 None:intergenic 20.0%
!! GGAATATAAGAATGATAATT+TGG + chr6_2:61157320-61157339 None:intergenic 20.0%
!! AACTCATTAAATCAATTACA+TGG - chr6_2:61158027-61158046 Msa0922520:intron 20.0%
!!! TTAGAAAGTTAGATAAGTTT+TGG + chr6_2:61158286-61158305 None:intergenic 20.0%
!!! CATTTTGACTAAAACAAATA+CGG - chr6_2:61158462-61158481 Msa0922520:intron 20.0%
!!! CATTTTTCAGAGAATATAAT+CGG + chr6_2:61158603-61158622 None:intergenic 20.0%
!!! TTTTTACTTACATTTTAGGA+CGG - chr6_2:61158715-61158734 Msa0922520:intron 20.0%
!!! TTTTTAACGGTACAAATTAT+TGG + chr6_2:61158766-61158785 None:intergenic 20.0%
!!! CACGGTTTAATTTTTTTTTT+TGG - chr6_2:61158926-61158945 Msa0922520:intron 20.0%
!! CAAGTATATGAAGAAAAAAA+AGG + chr6_2:61159098-61159117 None:intergenic 20.0%
! AGAAAAGTTGAAGATGAAAA+GGG + chr6_2:61155268-61155287 None:intergenic 25.0%
! AAGAAAAGTTGAAGATGAAA+AGG + chr6_2:61155269-61155288 None:intergenic 25.0%
! GATCATAATTTGAGGAAATT+AGG - chr6_2:61155876-61155895 Msa0922520:intron 25.0%
!! ACAACTCAATCCTAAAATTT+TGG - chr6_2:61156262-61156281 Msa0922520:intron 25.0%
!! AAATATTAGGGTTTTTGTTG+AGG + chr6_2:61156375-61156394 None:intergenic 25.0%
! GATAGGTAAAGAAAAAAAAG+AGG + chr6_2:61156399-61156418 None:intergenic 25.0%
! GAAATATTATATATGCAACC+CGG - chr6_2:61156785-61156804 Msa0922520:intron 25.0%
! AAATATTATATATGCAACCC+GGG - chr6_2:61156786-61156805 Msa0922520:intron 25.0%
!!! TTTTTTTTTCCACATGCTTT+TGG - chr6_2:61156969-61156988 Msa0922520:intron 25.0%
!! ATTTTCTTGTGTGCATATAA+GGG - chr6_2:61157128-61157147 Msa0922520:intron 25.0%
! AAAAGACAACCTTATAATGT+TGG + chr6_2:61157195-61157214 None:intergenic 25.0%
! GTATTGTTAATTTCATGTCT+AGG - chr6_2:61157238-61157257 Msa0922520:CDS 25.0%
!! TTTTATTAGGGAAAAGTTGT+AGG - chr6_2:61157398-61157417 Msa0922520:CDS 25.0%
!! AATGGATTTCTGTTTATTCT+TGG + chr6_2:61157448-61157467 None:intergenic 25.0%
! AATAAACAGAAATCCATTCA+CGG - chr6_2:61157450-61157469 Msa0922520:CDS 25.0%
! ATAATGCTGTAAAGAATCAT+TGG - chr6_2:61157560-61157579 Msa0922520:CDS 25.0%
!! AAGTTTGTTTGATGATCATT+TGG + chr6_2:61157667-61157686 None:intergenic 25.0%
! TGATTATAGAATTACCATCA+TGG - chr6_2:61157868-61157887 Msa0922520:intron 25.0%
!! TTTGAAATTGTGATACATCA+TGG - chr6_2:61157891-61157910 Msa0922520:intron 25.0%
!!! GTTAATTGTTTTTAGTCTGA+GGG + chr6_2:61158168-61158187 None:intergenic 25.0%
!!! AGTTAATTGTTTTTAGTCTG+AGG + chr6_2:61158169-61158188 None:intergenic 25.0%
!!! TAATTTTTTAAGAGGGTATG+AGG + chr6_2:61158222-61158241 None:intergenic 25.0%
!! CAGGTTTTACTTTAGTTAAA+AGG + chr6_2:61158317-61158336 None:intergenic 25.0%
! ACGTTCATTCTCTAATAAAT+GGG + chr6_2:61158417-61158436 None:intergenic 25.0%
! ATTTATTAGAGAATGAACGT+GGG - chr6_2:61158417-61158436 Msa0922520:intron 25.0%
!! GTTGACTAATTTTTGCTTAA+CGG + chr6_2:61158637-61158656 None:intergenic 25.0%
!!! TTTTTTTTTGGTTCTGTCTT+TGG - chr6_2:61158938-61158957 Msa0922520:intron 25.0%
! GAAAAAAAAGGGAAATAATC+TGG + chr6_2:61159086-61159105 None:intergenic 25.0%
! CTTTAAACAGTATAGCAAAA+TGG + chr6_2:61159234-61159253 None:intergenic 25.0%
!! TATACTGTTTAAAGTGTCAA+AGG - chr6_2:61159240-61159259 Msa0922520:intron 25.0%
! ATATAACCTCTAAATATGTG+CGG + chr6_2:61159345-61159364 None:intergenic 25.0%
! ATCAATGACCATTAGAAAAT+TGG + chr6_2:61159438-61159457 None:intergenic 25.0%
! AATCATAGAACTCAATTGAT+TGG + chr6_2:61159504-61159523 None:intergenic 25.0%
!!! ATCAGTTACTTCACTTTTAT+TGG + chr6_2:61159542-61159561 None:intergenic 25.0%
!!! TTCATTGATTTTTTGTCTAC+CGG - chr6_2:61159634-61159653 Msa0922520:five_prime_UTR 25.0%
!! ACTTAATTTTGCAACTATGT+TGG + chr6_2:61159666-61159685 None:intergenic 25.0%
! ACACACATATAATGTATTCA+AGG - chr6_2:61159783-61159802 Msa0922520:five_prime_UTR 25.0%
!! CCACAATTTTTGCAATATAA+TGG + chr6_2:61159852-61159871 None:intergenic 25.0%
! CCATTATATTGCAAAAATTG+TGG - chr6_2:61159849-61159868 Msa0922520:five_prime_UTR 25.0%
ACAATATTGAAGACAAGAAG+TGG + chr6_2:61155212-61155231 None:intergenic 30.0%
TGATCTATATGATCAACTCA+AGG + chr6_2:61155319-61155338 None:intergenic 30.0%
ATCATATAGATCAAAGCAAG+AGG - chr6_2:61155326-61155345 Msa0922520:three_prime_UTR 30.0%
TCATATAGATCAAAGCAAGA+GGG - chr6_2:61155327-61155346 Msa0922520:three_prime_UTR 30.0%
AGAAACCCTAATTCAAGAAT+AGG + chr6_2:61155395-61155414 None:intergenic 30.0%
! TAATTTTACCTGATCTTCCT+CGG + chr6_2:61155587-61155606 None:intergenic 30.0%
TTTCTTGTATACATACTCGA+TGG + chr6_2:61155685-61155704 None:intergenic 30.0%
ATGATAGCATACTTAACTCT+TGG - chr6_2:61155705-61155724 Msa0922520:intron 30.0%
TGATAGCATACTTAACTCTT+GGG - chr6_2:61155706-61155725 Msa0922520:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr6_2:61156051-61156070 None:intergenic 30.0%
TTAGTGGAGGGAAAAAAATT+AGG + chr6_2:61156224-61156243 None:intergenic 30.0%
AGTTGTTGCAAACCTAATAA+GGG + chr6_2:61156248-61156267 None:intergenic 30.0%
! AATCCTCAACCCTAAAATTT+TGG - chr6_2:61156310-61156329 Msa0922520:intron 30.0%
! TTGTGGGTTATAATGAGTAA+TGG - chr6_2:61156701-61156720 Msa0922520:intron 30.0%
TGTGTTCAATAAAGGTAGAA+GGG + chr6_2:61157036-61157055 None:intergenic 30.0%
ATGTGTTCAATAAAGGTAGA+AGG + chr6_2:61157037-61157056 None:intergenic 30.0%
! GATTTTCTTGTGTGCATATA+AGG - chr6_2:61157127-61157146 Msa0922520:intron 30.0%
TGTTAATTTCATGTCTAGGA+TGG - chr6_2:61157242-61157261 Msa0922520:CDS 30.0%
! GTTAATTTCATGTCTAGGAT+GGG - chr6_2:61157243-61157262 Msa0922520:CDS 30.0%
! AGAATGATAATTTGGTGGTA+GGG + chr6_2:61157312-61157331 None:intergenic 30.0%
! AAGAATGATAATTTGGTGGT+AGG + chr6_2:61157313-61157332 None:intergenic 30.0%
AGGTATAAGATCTATGCAAA+AGG - chr6_2:61157613-61157632 Msa0922520:intron 30.0%
AAAATTGTGTGATGATCAAG+AGG + chr6_2:61157640-61157659 None:intergenic 30.0%
ATCACAATTTCAAACCATGA+TGG + chr6_2:61157885-61157904 None:intergenic 30.0%
AGTTGTTAATTAAGTAGGGA+GGG + chr6_2:61158111-61158130 None:intergenic 30.0%
TAGTTGTTAATTAAGTAGGG+AGG + chr6_2:61158112-61158131 None:intergenic 30.0%
! GGCTAGTTGTTAATTAAGTA+GGG + chr6_2:61158115-61158134 None:intergenic 30.0%
GATGAAATGTATCATAGTAG+TGG + chr6_2:61158364-61158383 None:intergenic 30.0%
! TGAATAGTTTAGAGTTGGTT+GGG + chr6_2:61158391-61158410 None:intergenic 30.0%
TTCATTCTCTAATAAATGGG+TGG + chr6_2:61158414-61158433 None:intergenic 30.0%
CACGTTCATTCTCTAATAAA+TGG + chr6_2:61158418-61158437 None:intergenic 30.0%
CATTTATTAGAGAATGAACG+TGG - chr6_2:61158416-61158435 Msa0922520:intron 30.0%
TTTGACTAAAACAAATACGG+AGG - chr6_2:61158465-61158484 Msa0922520:intron 30.0%
! ACTAATTTTTGCTTAACGGA+GGG + chr6_2:61158633-61158652 None:intergenic 30.0%
CTAAAAAGTTCGTGAATTGT+CGG - chr6_2:61158902-61158921 Msa0922520:intron 30.0%
ATAAGTCGCTAACATATCAT+AGG - chr6_2:61159141-61159160 Msa0922520:intron 30.0%
ACAGTATAGCAAAATGGTTT+GGG + chr6_2:61159228-61159247 None:intergenic 30.0%
AACAGTATAGCAAAATGGTT+TGG + chr6_2:61159229-61159248 None:intergenic 30.0%
AGGATCTAGACATTTGATAT+TGG + chr6_2:61159310-61159329 None:intergenic 30.0%
AAATATGTGCGGTAAAATCA+GGG + chr6_2:61159334-61159353 None:intergenic 30.0%
TAAATATGTGCGGTAAAATC+AGG + chr6_2:61159335-61159354 None:intergenic 30.0%
! ATTTTACCGCACATATTTAG+AGG - chr6_2:61159336-61159355 Msa0922520:intron 30.0%
TCAAGCTCAATTCATACAAA+TGG + chr6_2:61159699-61159718 None:intergenic 30.0%
TTAGAACAATATCTCGATCT+AGG - chr6_2:61159723-61159742 Msa0922520:five_prime_UTR 30.0%
ATGGGAAGAGAATATATGGT+GGG + chr6_2:61155181-61155200 None:intergenic 35.0%
AGACATGGGAAGAGAATATA+TGG + chr6_2:61155185-61155204 None:intergenic 35.0%
AAACTATAGGTGAAGAGGAT+AGG - chr6_2:61155353-61155372 Msa0922520:CDS 35.0%
AAAGCTATGGACCTCATAAT+TGG - chr6_2:61155541-61155560 Msa0922520:intron 35.0%
CACAGCTAGATCATAATTTG+AGG - chr6_2:61155868-61155887 Msa0922520:intron 35.0%
ACCAATACACAGCTAAAATC+TGG + chr6_2:61155964-61155983 None:intergenic 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr6_2:61156039-61156058 None:intergenic 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr6_2:61156050-61156069 None:intergenic 35.0%
CAAGAGGATAGGAATGAAAT+TGG + chr6_2:61156123-61156142 None:intergenic 35.0%
CAAACCTAATAAGGGATTAG+TGG + chr6_2:61156240-61156259 None:intergenic 35.0%
GAGTTGTTGCAAACCTAATA+AGG + chr6_2:61156249-61156268 None:intergenic 35.0%
!!! GATCCAAAATTTTAGGGTTG+AGG + chr6_2:61156316-61156335 None:intergenic 35.0%
CAAAAAGTTTAGTTGAGCTC+AGG + chr6_2:61156442-61156461 None:intergenic 35.0%
GAAACTCAAATTGTGTGCAT+GGG + chr6_2:61157012-61157031 None:intergenic 35.0%
AGAAACTCAAATTGTGTGCA+TGG + chr6_2:61157013-61157032 None:intergenic 35.0%
! TTGTGTGCATATAAGGGTTT+TGG - chr6_2:61157134-61157153 Msa0922520:intron 35.0%
TAAAGACTGTAGTGATAGGA+AGG + chr6_2:61157279-61157298 None:intergenic 35.0%
GAGTTAAAGACTGTAGTGAT+AGG + chr6_2:61157283-61157302 None:intergenic 35.0%
GTTGAGATGGTTCAATCAAT+TGG - chr6_2:61157420-61157439 Msa0922520:CDS 35.0%
AGCGTCTTATAACTTCTCAT+CGG - chr6_2:61157485-61157504 Msa0922520:CDS 35.0%
ATAACTTCTCATCGGATTCA+TGG - chr6_2:61157493-61157512 Msa0922520:CDS 35.0%
ATCGGATTCATGGTAATAGA+TGG - chr6_2:61157503-61157522 Msa0922520:CDS 35.0%
TCGGATTCATGGTAATAGAT+GGG - chr6_2:61157504-61157523 Msa0922520:CDS 35.0%
GATACTTCTCAACAAAAGAG+TGG + chr6_2:61157705-61157724 None:intergenic 35.0%
GAAAGTGAAACTTGGGAAAT+TGG + chr6_2:61157768-61157787 None:intergenic 35.0%
TTTCCCAAGTTTCACTTTCA+TGG - chr6_2:61157769-61157788 Msa0922520:intron 35.0%
AGCATTGTGGAACAAGAATT+TGG + chr6_2:61157796-61157815 None:intergenic 35.0%
ATGGACCAAAGTTATTCACA+GGG - chr6_2:61158046-61158065 Msa0922520:intron 35.0%
!! GGGCTAGTTGTTAATTAAGT+AGG + chr6_2:61158116-61158135 None:intergenic 35.0%
! GTGAATAGTTTAGAGTTGGT+TGG + chr6_2:61158392-61158411 None:intergenic 35.0%
! CGGTTCAAAAAAGTACAACT+CGG + chr6_2:61158583-61158602 None:intergenic 35.0%
! GACTAATTTTTGCTTAACGG+AGG + chr6_2:61158634-61158653 None:intergenic 35.0%
!!! TACTTACATTTTAGGACGGA+AGG - chr6_2:61158719-61158738 Msa0922520:intron 35.0%
! CGTCACAGTTCATTTCTTTT+CGG + chr6_2:61158849-61158868 None:intergenic 35.0%
CGAAAAGAAATGAACTGTGA+CGG - chr6_2:61158847-61158866 Msa0922520:intron 35.0%
! TTTTTCTAAACAGCCCTAAG+TGG - chr6_2:61158961-61158980 Msa0922520:intron 35.0%
AAAAGGGAAATAATCTGGTG+TGG + chr6_2:61159081-61159100 None:intergenic 35.0%
CATATCATAGGTTTCTCTCT+TGG - chr6_2:61159153-61159172 Msa0922520:intron 35.0%
CTAGACATTTGATATTGGTG+TGG + chr6_2:61159305-61159324 None:intergenic 35.0%
AATATGTGCGGTAAAATCAG+GGG + chr6_2:61159333-61159352 None:intergenic 35.0%
TAATGCTAGAAGAGATGATG+AGG - chr6_2:61159561-61159580 Msa0922520:five_prime_UTR 35.0%
GGAAGTCAATCAAGATGTTA+TGG - chr6_2:61159582-61159601 Msa0922520:five_prime_UTR 35.0%
TGTTATGGAACTGAAGAACA+AGG - chr6_2:61159597-61159616 Msa0922520:five_prime_UTR 35.0%
GCTCAATTCATACAAATGGT+TGG + chr6_2:61159695-61159714 None:intergenic 35.0%
! AATATATGGTGGGGGAAGAT+GGG + chr6_2:61155171-61155190 None:intergenic 40.0%
TGGGAAGAGAATATATGGTG+GGG + chr6_2:61155180-61155199 None:intergenic 40.0%
CATGGGAAGAGAATATATGG+TGG + chr6_2:61155182-61155201 None:intergenic 40.0%
CAAGAAGTGGAAAGAGACAT+GGG + chr6_2:61155199-61155218 None:intergenic 40.0%
ACAAGAAGTGGAAAGAGACA+TGG + chr6_2:61155200-61155219 None:intergenic 40.0%
AGCAAGAGGGAGAAAACTAT+AGG - chr6_2:61155340-61155359 Msa0922520:exon 40.0%
GGAGAAAACTATAGGTGAAG+AGG - chr6_2:61155348-61155367 Msa0922520:exon 40.0%
ATATGTGTAGTAGAGGCCAT+TGG - chr6_2:61155481-61155500 Msa0922520:CDS 40.0%
ATCTGAGGATGAGAAGCTTA+GGG - chr6_2:61155509-61155528 Msa0922520:CDS 40.0%
!!! GCCAGATTTTAGCTGTGTAT+TGG - chr6_2:61155960-61155979 Msa0922520:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr6_2:61156046-61156065 Msa0922520:intron 40.0%
! CCTAATAAGGGATTAGTGGA+GGG + chr6_2:61156236-61156255 None:intergenic 40.0%
! ACCTAATAAGGGATTAGTGG+AGG + chr6_2:61156237-61156256 None:intergenic 40.0%
! TAAGTGCAACCAAAAGCATG+TGG + chr6_2:61156981-61157000 None:intergenic 40.0%
AAATTGTGTGCATGGGTGTA+GGG + chr6_2:61157005-61157024 None:intergenic 40.0%
! TGATAATTTGGTGGTAGGGA+TGG + chr6_2:61157308-61157327 None:intergenic 40.0%
! GGAAAAGTTGTAGGTTGAGA+TGG - chr6_2:61157407-61157426 Msa0922520:CDS 40.0%
AAACAGAAATCCATTCACGG+AGG - chr6_2:61157453-61157472 Msa0922520:CDS 40.0%
GATTCATGGTAATAGATGGG+CGG - chr6_2:61157507-61157526 Msa0922520:CDS 40.0%
GAATCATTGGCATGTGATGA+TGG - chr6_2:61157573-61157592 Msa0922520:CDS 40.0%
GGACCATGAAAGTGAAACTT+GGG + chr6_2:61157775-61157794 None:intergenic 40.0%
TGGACCATGAAAGTGAAACT+TGG + chr6_2:61157776-61157795 None:intergenic 40.0%
TCTTGTTCCACAATGCTTCA+AGG - chr6_2:61157799-61157818 Msa0922520:intron 40.0%
!! AGATGTACCTTGAAGCATTG+TGG + chr6_2:61157809-61157828 None:intergenic 40.0%
CATGGACCAAAGTTATTCAC+AGG - chr6_2:61158045-61158064 Msa0922520:intron 40.0%
!! GATCATTTTTCGCAACATGC+AGG + chr6_2:61158336-61158355 None:intergenic 40.0%
! GGTGGTGAATAGTTTAGAGT+TGG + chr6_2:61158396-61158415 None:intergenic 40.0%
! CAGTTCATTTCTTTTCGGTG+TGG + chr6_2:61158844-61158863 None:intergenic 40.0%
CTTGGATACTCATTCATGAG+AGG + chr6_2:61158994-61159013 None:intergenic 40.0%
CCAAGCTAACACAAAGACTT+CGG - chr6_2:61159009-61159028 Msa0922520:intron 40.0%
CACACTAAGTAGGTATGAGT+TGG + chr6_2:61159395-61159414 None:intergenic 40.0%
! GAATATATGGTGGGGGAAGA+TGG + chr6_2:61155172-61155191 None:intergenic 45.0%
GGGAAGAGAATATATGGTGG+GGG + chr6_2:61155179-61155198 None:intergenic 45.0%
CTAAGCTTCTCATCCTCAGA+TGG + chr6_2:61155510-61155529 None:intergenic 45.0%
CATCTGAGGATGAGAAGCTT+AGG - chr6_2:61155508-61155527 Msa0922520:CDS 45.0%
GCTATGGCGTTCCAATTATG+AGG + chr6_2:61155555-61155574 None:intergenic 45.0%
! TCCTCGGAGATTTTCAGCTA+TGG + chr6_2:61155571-61155590 None:intergenic 45.0%
GAAAATCTCCGAGGAAGATC+AGG - chr6_2:61155576-61155595 Msa0922520:intron 45.0%
CCCTCCACTAATCCCTTATT+AGG - chr6_2:61156233-61156252 Msa0922520:intron 45.0%
! GGGTTTTTGTTGAGGTAGCA+TGG + chr6_2:61156367-61156386 None:intergenic 45.0%
TCTTTACCTATCCATGACCC+TGG - chr6_2:61156407-61156426 Msa0922520:intron 45.0%
AATTGTGTGCATGGGTGTAG+GGG + chr6_2:61157004-61157023 None:intergenic 45.0%
CAAATTGTGTGCATGGGTGT+AGG + chr6_2:61157006-61157025 None:intergenic 45.0%
! TAATTTGGTGGTAGGGATGG+AGG + chr6_2:61157305-61157324 None:intergenic 45.0%
TCTTCTTCTTCCTCCGTGAA+TGG + chr6_2:61157466-61157485 None:intergenic 45.0%
GTAATTGCAAGACACTTCCC+CGG - chr6_2:61157529-61157548 Msa0922520:CDS 45.0%
TACAGCATTATCAGTCCGTC+CGG + chr6_2:61157551-61157570 None:intergenic 45.0%
AAGAGCTATGTGAGACACGA+GGG + chr6_2:61157744-61157763 None:intergenic 45.0%
AAAGAGCTATGTGAGACACG+AGG + chr6_2:61157745-61157764 None:intergenic 45.0%
GCTGACCCTGTGAATAACTT+TGG + chr6_2:61158054-61158073 None:intergenic 45.0%
!! TTGGCTTGTTGTAGCTAGCT+TGG + chr6_2:61158267-61158286 None:intergenic 45.0%
!!! ATTTTAGGACGGAAGGACTG+AGG - chr6_2:61158726-61158745 Msa0922520:intron 45.0%
!!! TTTTAGGACGGAAGGACTGA+GGG - chr6_2:61158727-61158746 Msa0922520:intron 45.0%
AGTTCGTGAATTGTCGGTCA+CGG - chr6_2:61158908-61158927 Msa0922520:intron 45.0%
TTCTAAACAGCCCTAAGTGG+TGG - chr6_2:61158964-61158983 Msa0922520:intron 45.0%
CCGAAGTCTTTGTGTTAGCT+TGG + chr6_2:61159012-61159031 None:intergenic 45.0%
AAGACTTCGGATTGTACCCA+TGG - chr6_2:61159022-61159041 Msa0922520:intron 45.0%
AGACTTCGGATTGTACCCAT+GGG - chr6_2:61159023-61159042 Msa0922520:intron 45.0%
TCCATCAAGCATAAACCGCT+AGG + chr6_2:61159179-61159198 None:intergenic 45.0%
GAGAGAGAGACACACTAAGT+AGG + chr6_2:61159405-61159424 None:intergenic 45.0%
GCAACTATGTTGGCAACTTC+CGG + chr6_2:61159656-61159675 None:intergenic 45.0%
!!! TTTTTATTTTGAAAAATATT+TGG - chr6_2:61155920-61155939 Msa0922520:intron 5.0%
!!! TTTTATTTTGAAAAATATTT+GGG - chr6_2:61155921-61155940 Msa0922520:intron 5.0%
!!! GAAAATTTTAAATAATTATT+TGG - chr6_2:61156516-61156535 Msa0922520:intron 5.0%
!!! ATTTTAATCAATATTATATT+TGG - chr6_2:61156545-61156564 Msa0922520:intron 5.0%
!!! TTTTAATCAATATTATATTT+GGG - chr6_2:61156546-61156565 Msa0922520:intron 5.0%
!!! TAATCAATTAATTTTTTTTT+TGG + chr6_2:61156853-61156872 None:intergenic 5.0%
CATCCTCAGATGGTCTCCAA+TGG + chr6_2:61155500-61155519 None:intergenic 50.0%
GGATGAGAAGCTTAGGGAGT+TGG - chr6_2:61155515-61155534 Msa0922520:CDS 50.0%
TGAGAAGCTTAGGGAGTTGG+TGG - chr6_2:61155518-61155537 Msa0922520:CDS 50.0%
!! AGGGAGTTGGTGGAAAGCTA+TGG - chr6_2:61155528-61155547 Msa0922520:intron 50.0%
GCCATAGCTGAAAATCTCCG+AGG - chr6_2:61155567-61155586 Msa0922520:intron 50.0%
AGCTCAGGATATGCTCACCA+GGG + chr6_2:61156427-61156446 None:intergenic 50.0%
ATTATTTACCCGGCGTTGCC+CGG + chr6_2:61156807-61156826 None:intergenic 50.0%
ACAGCATTATCAGTCCGTCC+GGG + chr6_2:61157550-61157569 None:intergenic 50.0%
!! ATTGGCATGTGATGATGGCG+AGG - chr6_2:61157578-61157597 Msa0922520:CDS 50.0%
! TGTTGTAGCTAGCTTGGTCG+TGG + chr6_2:61158261-61158280 None:intergenic 50.0%
! GAGAGGTTAGCCACCACTTA+GGG + chr6_2:61158977-61158996 None:intergenic 50.0%
! TGAGAGGTTAGCCACCACTT+AGG + chr6_2:61158978-61158997 None:intergenic 50.0%
CTAACAGTGGATCCACCCAT+GGG + chr6_2:61159041-61159060 None:intergenic 50.0%
ATCCACTGTTAGGCATGGTG+TGG - chr6_2:61159049-61159068 Msa0922520:intron 50.0%
AGGTTTCTCTCTTGGCCTAG+CGG - chr6_2:61159161-61159180 Msa0922520:intron 50.0%
GCCTAGCGGTTTATGCTTGA+TGG - chr6_2:61159175-61159194 Msa0922520:intron 50.0%
ATGTGCGGTAAAATCAGGGG+AGG + chr6_2:61159330-61159349 None:intergenic 50.0%
AGGCCATTGGAGACCATCTG+AGG - chr6_2:61155494-61155513 Msa0922520:CDS 55.0%
TGCTCACCAGGGTCATGGAT+AGG + chr6_2:61156416-61156435 None:intergenic 55.0%
GGATATGCTCACCAGGGTCA+TGG + chr6_2:61156421-61156440 None:intergenic 55.0%
GAGCTCAGGATATGCTCACC+AGG + chr6_2:61156428-61156447 None:intergenic 55.0%
TTATTTACCCGGCGTTGCCC+GGG + chr6_2:61156806-61156825 None:intergenic 55.0%
TTGCAAGACACTTCCCCGGA+CGG - chr6_2:61157533-61157552 Msa0922520:CDS 55.0%
CAGCATTATCAGTCCGTCCG+GGG + chr6_2:61157549-61157568 None:intergenic 55.0%
TGGCGAGGATTCGTCGAGAA+AGG - chr6_2:61157593-61157612 Msa0922520:CDS 55.0%
CTTCGGATTGTACCCATGGG+TGG - chr6_2:61159026-61159045 Msa0922520:intron 55.0%
CCTAACAGTGGATCCACCCA+TGG + chr6_2:61159042-61159061 None:intergenic 55.0%
CCATGGGTGGATCCACTGTT+AGG - chr6_2:61159039-61159058 Msa0922520:intron 55.0%
GGTGGATCCACTGTTAGGCA+TGG - chr6_2:61159044-61159063 Msa0922520:intron 55.0%
TGCCACACCATGCCTAACAG+TGG + chr6_2:61159054-61159073 None:intergenic 55.0%
ATATGCAACCCGGGCAACGC+CGG - chr6_2:61156795-61156814 Msa0922520:intron 60.0%
TATGCAACCCGGGCAACGCC+GGG - chr6_2:61156796-61156815 Msa0922520:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 61155159 61159878 61155159 ID=Msa0922520;Name=Msa0922520
chr6_2 mRNA 61155159 61159878 61155159 ID=Msa0922520-mRNA-1;Parent=Msa0922520;Name=Msa0922520-mRNA-1;_AED=0.07;_eAED=0.07;_QI=324|1|1|1|1|1|3|191|240
chr6_2 exon 61155159 61155543 61155159 ID=Msa0922520-mRNA-1:exon:9444;Parent=Msa0922520-mRNA-1
chr6_2 exon 61157217 61157630 61157217 ID=Msa0922520-mRNA-1:exon:9443;Parent=Msa0922520-mRNA-1
chr6_2 exon 61159440 61159878 61159440 ID=Msa0922520-mRNA-1:exon:9442;Parent=Msa0922520-mRNA-1
chr6_2 five_prime_UTR 61159555 61159878 61159555 ID=Msa0922520-mRNA-1:five_prime_utr;Parent=Msa0922520-mRNA-1
chr6_2 CDS 61159440 61159554 61159440 ID=Msa0922520-mRNA-1:cds;Parent=Msa0922520-mRNA-1
chr6_2 CDS 61157217 61157630 61157217 ID=Msa0922520-mRNA-1:cds;Parent=Msa0922520-mRNA-1
chr6_2 CDS 61155350 61155543 61155350 ID=Msa0922520-mRNA-1:cds;Parent=Msa0922520-mRNA-1
chr6_2 three_prime_UTR 61155159 61155349 61155159 ID=Msa0922520-mRNA-1:three_prime_utr;Parent=Msa0922520-mRNA-1
Gene Sequence

>Msa0922520

ATGTGTAGTAGAGGCCATTGGAGACCATCTGAGGATGAGAAGCTTAGGGAGTTGGTGGAAAGCTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTCCGAGGAAGATCAGGGAAAAGTTGTAGGTTGAGATGGTTCAATCAATTGGATCCAAGAATAAACAGAAATCCATTCACGGAGGAAGAAGAAGAGCGTCTTATAACTTCTCATCGGATTCATGGTAATAGATGGGCGGTAATTGCAAGACACTTCCCCGGACGGACTGATAATGCTGTAAAGAATCATTGGCATGTGATGATGGCGAGGATTCGTCGAGAAAGGTATAAGATCTATGCAAAAGGTCCTCTTGATCATCACACAATTTTCTCTCCAAATGATCATCAAACAAACTTTGAGAGAACAAATCTCCACTCTTTTGTTGAGAAGTATCATGAAAAGCATAATCACCCTCGTGTCTCACATAGCTCTTTCCAATTTCCCAAGTTTCACTTTCATGGTCCAAATTCTTGTTCCACAATGCTTCAAGATAAAAGCCAATCAATTGAGTTCTATGATTTTCTTCAAGTAGATTCCAATAAAAGTGAAGTAACTGATAATGCTAGAAGAGATGATGAGGAAGTCAATCAAGATGTTATGGAACTGAAGAACAAGGAAAACAATGTTCAATTCATTGATTTTTTGTCTACCGGAAGTTGCCAACATAGTTGCAAAATTAAGTGA
Protein sequence

>Msa0922520

MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLITSHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERYKIYAKGPLDHHTIFSPNDHQTNFERTNLHSFVEKYHEKHNHPRVSHSSFQFPKFHFHGPNSCSTMLQDKSQSIEFYDFLQVDSNKSEVTDNARRDDEEVNQDVMELKNKENNVQFIDFLSTGSCQHSCKIK*