AlfalfaGEDB | Msa0922830

M. sativa cultivar zhongmu-4 / Msa0922830

KEGG: -
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009825 GO:0009835 GO:0009889 GO:0009908 GO:0009987 GO:0010150 GO:0010154 GO:0010468 GO:0010556 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0080090 GO:0090567 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0922830	QSD99826.1	83.043	230	32	2	1	223	1	230	1.17e-131	381

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0922830	sp\|Q9FY93\|NAC83_ARATH	73.653	167	42	1	1	165	1	167	8.61e-90	267

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification
Msa0922830	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0922830	MtrunA17_Chr7g0214071	78.516	256	24	6	1	225	1	256	4.17e-131	369
Msa0922830	MtrunA17_Chr8g0385991	61.364	176	57	3	1	166	1	175	1.38e-73	223
Msa0922830	MtrunA17_Chr3g0131911	59.551	178	60	3	1	166	1	178	1.75e-68	210
Msa0922830	MtrunA17_Chr4g0047841	54.857	175	50	3	13	158	14	188	2.34e-57	185
Msa0922830	MtrunA17_Chr7g0252971	46.847	222	89	8	11	203	5	226	3.61e-57	184
Msa0922830	MtrunA17_Chr4g0042561	53.672	177	70	4	13	179	8	182	1.73e-56	180
Msa0922830	MtrunA17_Chr2g0318101	56.790	162	53	3	14	158	15	176	4.71e-56	182
Msa0922830	MtrunA17_Chr7g0243371	89.773	88	9	0	59	146	12	99	5.77e-55	171
Msa0922830	MtrunA17_Chr5g0417791	56.329	158	57	3	12	159	1	156	6.36e-55	176
Msa0922830	MtrunA17_Chr7g0263931	47.368	190	89	4	9	188	6	194	1.29e-54	177
Msa0922830	MtrunA17_Chr3g0109821	57.558	172	61	6	12	173	4	173	6.04e-54	183
Msa0922830	MtrunA17_Chr2g0326361	54.605	152	59	2	14	155	14	165	3.29e-53	174
Msa0922830	MtrunA17_Chr3g0124761	56.962	158	56	4	11	159	4	158	8.60e-53	171
Msa0922830	MtrunA17_Chr2g0309891	43.277	238	107	9	12	224	4	238	1.81e-52	172
Msa0922830	MtrunA17_Chr3g0139331	51.899	158	72	2	11	164	8	165	2.10e-52	172
Msa0922830	MtrunA17_Chr4g0017921	48.634	183	76	5	14	181	8	187	1.25e-51	170
Msa0922830	MtrunA17_Chr1g0147421	53.459	159	69	3	11	164	24	182	1.85e-51	170
Msa0922830	MtrunA17_Chr2g0309331	50.955	157	69	3	10	159	6	161	6.25e-51	168
Msa0922830	MtrunA17_Chr5g0405211	49.112	169	77	4	11	172	5	171	6.90e-51	168
Msa0922830	MtrunA17_Chr4g0060931	49.714	175	75	5	1	164	1	173	1.02e-50	168
Msa0922830	MtrunA17_Chr4g0018391	53.247	154	63	4	13	159	6	157	1.15e-50	167
Msa0922830	MtrunA17_Chr5g0398971	50.323	155	68	3	13	159	6	159	2.70e-50	167
Msa0922830	MtrunA17_Chr1g0183741	41.951	205	108	4	14	210	10	211	2.74e-50	165
Msa0922830	MtrunA17_Chr1g0200561	52.121	165	70	4	11	168	16	178	3.15e-50	167
Msa0922830	MtrunA17_Chr2g0316971	50.625	160	71	2	11	162	20	179	4.82e-50	167
Msa0922830	MtrunA17_Chr5g0433781	56.688	157	54	6	12	158	4	156	6.29e-50	172
Msa0922830	MtrunA17_Chr3g0091921	49.405	168	75	3	11	170	13	178	7.33e-50	164
Msa0922830	MtrunA17_Chr2g0318081	53.416	161	67	3	10	164	12	170	1.33e-49	165
Msa0922830	MtrunA17_Chr4g0056541	49.693	163	73	3	13	168	6	166	2.61e-49	165
Msa0922830	MtrunA17_Chr6g0484441	39.912	228	118	5	11	221	2	227	2.88e-49	163
Msa0922830	MtrunA17_Chr8g0384721	54.037	161	59	5	10	159	3	159	5.37e-49	162
Msa0922830	MtrunA17_Chr8g0372121	51.634	153	65	4	14	159	6	156	1.25e-48	161
Msa0922830	MtrunA17_Chr8g0346001	46.023	176	75	3	2	159	3	176	1.97e-48	164
Msa0922830	MtrunA17_Chr6g0481091	50.303	165	71	4	12	168	4	165	2.42e-48	159
Msa0922830	MtrunA17_Chr6g0453451	50.000	160	70	4	13	164	19	176	3.07e-48	160
Msa0922830	MtrunA17_Chr8g0359921	53.704	162	65	5	11	164	11	170	7.05e-48	160
Msa0922830	MtrunA17_Chr3g0130731	52.830	159	63	3	10	159	3	158	2.79e-47	157
Msa0922830	MtrunA17_Chr7g0261411	50.685	146	68	2	14	156	10	154	5.18e-47	157
Msa0922830	MtrunA17_Chr6g0461661	47.742	155	73	2	12	158	16	170	1.54e-46	158
Msa0922830	MtrunA17_Chr7g0253011	49.123	171	74	5	1	158	1	171	2.66e-46	157
Msa0922830	MtrunA17_Chr2g0312321	47.305	167	71	5	4	160	1	160	8.49e-46	154
Msa0922830	MtrunA17_Chr5g0400461	40.404	198	108	2	10	197	2	199	1.05e-45	154
Msa0922830	MtrunA17_Chr5g0417001	42.233	206	98	4	8	199	9	207	1.50e-45	155
Msa0922830	MtrunA17_Chr3g0144271	50.649	154	68	4	8	157	17	166	1.43e-44	154
Msa0922830	MtrunA17_Chr8g0361731	43.017	179	87	2	1	164	1	179	2.14e-44	152
Msa0922830	MtrunA17_Chr4g0054791	45.349	172	85	3	14	176	6	177	6.94e-44	149
Msa0922830	MtrunA17_Chr2g0311651	42.932	191	84	5	6	175	13	199	1.11e-43	149
Msa0922830	MtrunA17_Chr5g0442771	47.674	172	73	5	1	156	6	176	1.25e-43	149
Msa0922830	MtrunA17_Chr7g0217721	45.556	180	73	5	7	164	12	188	1.33e-43	149
Msa0922830	MtrunA17_Chr2g0311661	45.810	179	75	5	1	159	9	185	9.52e-43	145
Msa0922830	MtrunA17_Chr7g0217711	52.206	136	58	3	7	138	12	144	5.15e-42	140
Msa0922830	MtrunA17_Chr6g0453131	47.500	160	68	4	14	158	15	173	7.18e-42	146
Msa0922830	MtrunA17_Chr5g0428991	50.323	155	67	3	13	159	24	176	9.13e-42	149
Msa0922830	MtrunA17_Chr3g0128111	46.667	150	70	3	17	158	45	192	1.27e-41	141
Msa0922830	MtrunA17_Chr3g0128151	43.243	185	82	5	14	190	22	191	1.42e-41	149
Msa0922830	MtrunA17_Chr3g0130101	46.341	164	72	5	16	168	9	167	2.27e-41	144
Msa0922830	MtrunA17_Chr1g0201021	48.171	164	69	5	16	168	21	179	8.24e-41	146
Msa0922830	MtrunA17_Chr1g0197351	49.704	169	67	4	14	167	42	207	9.52e-41	145
Msa0922830	MtrunA17_Chr3g0092671	48.125	160	73	4	16	167	7	164	1.07e-40	145
Msa0922830	MtrunA17_Chr1g0197361	44.886	176	87	4	16	183	10	183	3.34e-40	145
Msa0922830	MtrunA17_Chr4g0076731	48.701	154	72	4	16	165	56	206	3.61e-39	140
Msa0922830	MtrunA17_Chr8g0364791	43.976	166	79	4	13	168	5	166	3.08e-38	137
Msa0922830	MtrunA17_Chr8g0384201	43.976	166	79	4	13	168	5	166	9.02e-38	137
Msa0922830	MtrunA17_Chr4g0038751	46.939	147	72	3	16	158	17	161	9.27e-38	133
Msa0922830	MtrunA17_Chr8g0345671	45.270	148	72	4	14	155	11	155	1.80e-36	132
Msa0922830	MtrunA17_Chr4g0050701	40.476	168	79	4	14	169	11	169	7.62e-36	125
Msa0922830	MtrunA17_Chr8g0345691	41.333	150	79	4	13	156	11	157	3.59e-32	120
Msa0922830	MtrunA17_Chr4g0026141	40.506	158	79	6	14	157	5	161	1.24e-29	111
Msa0922830	MtrunA17_Chr8g0384351	39.873	158	73	6	12	166	8	146	2.43e-29	108
Msa0922830	MtrunA17_Chr2g0321631	39.623	159	78	6	15	157	5	161	9.95e-29	108
Msa0922830	MtrunA17_Chr8g0345711	43.077	130	67	3	14	137	12	140	1.31e-28	105
Msa0922830	MtrunA17_Chr2g0321741	45.217	115	53	3	45	155	23	131	1.32e-28	110
Msa0922830	MtrunA17_Chr7g0266701	38.095	168	78	7	14	160	4	166	1.36e-28	108
Msa0922830	MtrunA17_Chr3g0113001	48.361	122	55	3	49	164	3	122	4.43e-28	107
Msa0922830	MtrunA17_Chr8g0345731	39.850	133	70	4	14	137	24	155	1.12e-25	98.6
Msa0922830	MtrunA17_Chr8g0345721	36.538	156	63	3	17	137	38	192	1.69e-25	99.0
Msa0922830	MtrunA17_Chr3g0113031	49.495	99	35	3	76	164	5	98	3.19e-24	97.1
Msa0922830	MtrunA17_Chr8g0345741	36.301	146	74	5	27	163	4	139	8.78e-24	93.2
Msa0922830	MtrunA17_Chr8g0345701	36.538	156	69	6	14	148	7	153	3.99e-22	89.4
Msa0922830	MtrunA17_Chr3g0130321	34.337	166	77	7	12	156	5	159	1.24e-20	86.3
Msa0922830	MtrunA17_Chr7g0251661	34.815	135	79	6	7	136	3	133	5.32e-18	77.8
Msa0922830	MtrunA17_Chr7g0251671	30.178	169	105	7	7	170	3	163	3.91e-17	75.9
Msa0922830	MtrunA17_Chr7g0251651	33.121	157	95	6	6	156	10	162	1.17e-16	75.1
Msa0922830	MtrunA17_Chr1g0168571	34.028	144	82	5	22	154	13	154	1.43e-14	71.6
Msa0922830	MtrunA17_Chr4g0040541	27.731	238	141	11	14	225	48	280	2.07e-14	70.5
Msa0922830	MtrunA17_Chr3g0113011	49.123	57	29	0	7	63	12	68	1.46e-13	63.9
Msa0922830	MtrunA17_Chr2g0282871	31.973	147	72	8	14	138	53	193	9.94e-13	66.2
Msa0922830	MtrunA17_Chr8g0367761	31.373	153	71	8	14	141	68	211	7.24e-12	63.2
Msa0922830	MtrunA17_Chr3g0113041	47.368	57	30	0	7	63	12	68	8.56e-12	58.9
Msa0922830	MtrunA17_Chr4g0046431	29.310	174	97	9	14	165	68	237	8.87e-12	63.5
Msa0922830	MtrunA17_Chr8g0389661	29.885	174	90	9	14	160	47	215	3.53e-11	62.0
Msa0922830	MtrunA17_Chr2g0324961	31.293	147	73	8	14	138	49	189	8.42e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0922830	AT5G13180.1	73.653	167	42	1	1	165	1	167	8.75e-91	267
Msa0922830	AT2G33480.2	59.024	205	80	3	1	203	1	203	2.13e-83	249
Msa0922830	AT2G33480.1	58.454	207	80	3	1	203	1	205	3.64e-83	249
Msa0922830	AT1G77450.1	49.746	197	85	4	10	196	6	198	1.68e-55	177
Msa0922830	AT1G69490.1	57.143	161	56	4	14	164	9	166	2.73e-55	177
Msa0922830	AT1G61110.1	56.287	167	54	4	10	158	12	177	4.01e-55	179
Msa0922830	AT5G39610.1	45.714	210	99	5	12	208	18	225	2.69e-54	176
Msa0922830	AT3G04070.2	54.118	170	62	4	8	161	4	173	4.03e-54	177
Msa0922830	AT1G65910.1	46.377	207	93	6	12	210	4	200	1.68e-53	182
Msa0922830	AT5G07680.1	53.086	162	66	4	11	164	14	173	4.56e-53	174
Msa0922830	AT2G24430.2	53.086	162	71	2	8	164	10	171	4.94e-53	173
Msa0922830	AT2G24430.1	53.086	162	71	2	8	164	10	171	4.94e-53	173
Msa0922830	AT5G61430.1	54.321	162	64	5	11	164	13	172	5.51e-53	174
Msa0922830	AT5G07680.2	54.088	159	63	4	14	164	3	159	7.40e-53	173
Msa0922830	AT3G15510.1	56.329	158	52	3	18	158	21	178	1.58e-52	173
Msa0922830	AT4G27410.2	50.588	170	76	3	11	174	11	178	1.74e-52	171
Msa0922830	AT1G33280.1	52.632	152	64	2	14	159	8	157	4.31e-52	171
Msa0922830	AT3G04070.1	51.977	177	53	4	14	158	10	186	4.44e-52	172
Msa0922830	AT3G18400.1	52.830	159	68	4	11	164	2	158	8.49e-52	170
Msa0922830	AT5G17260.1	44.843	223	103	5	12	225	4	215	8.89e-52	174
Msa0922830	AT3G03200.1	41.304	230	117	5	12	225	4	231	1.13e-51	174
Msa0922830	AT4G10350.1	53.548	155	61	4	14	159	9	161	2.31e-51	170
Msa0922830	AT1G54330.1	56.494	154	56	3	12	158	4	153	1.44e-50	166
Msa0922830	AT3G04060.1	54.194	155	62	4	12	158	18	171	1.53e-50	167
Msa0922830	AT3G15170.1	51.282	156	68	3	11	158	17	172	1.73e-50	166
Msa0922830	AT1G76420.1	51.899	158	68	4	14	165	22	177	2.22e-50	167
Msa0922830	AT5G53950.1	52.941	153	64	2	14	158	17	169	2.60e-50	168
Msa0922830	AT1G12260.2	50.943	159	69	4	13	164	6	162	3.14e-50	167
Msa0922830	AT5G18270.2	52.903	155	64	3	12	158	19	172	5.08e-50	166
Msa0922830	AT4G27410.3	45.989	187	76	3	11	174	11	195	8.11e-50	165
Msa0922830	AT2G18060.3	53.086	162	66	6	14	167	9	168	8.82e-50	166
Msa0922830	AT2G18060.1	53.086	162	66	6	14	167	9	168	8.82e-50	166
Msa0922830	AT5G66300.1	51.515	165	68	5	4	159	2	163	9.10e-50	164
Msa0922830	AT1G62700.1	52.532	158	66	4	13	163	6	161	1.17e-49	167
Msa0922830	AT1G62700.2	52.532	158	66	4	13	163	6	161	1.17e-49	167
Msa0922830	AT1G12260.1	50.943	159	69	4	13	164	6	162	1.35e-49	166
Msa0922830	AT5G62380.2	53.503	157	60	6	12	159	5	157	1.37e-49	165
Msa0922830	AT5G62380.1	53.503	157	60	6	12	159	5	157	1.37e-49	165
Msa0922830	AT5G18270.1	52.903	155	64	3	12	158	19	172	1.42e-49	165
Msa0922830	AT1G01720.1	52.727	165	65	4	12	166	5	166	3.92e-49	162
Msa0922830	AT4G36160.1	50.307	163	70	4	14	167	10	170	4.47e-49	165
Msa0922830	AT4G36160.3	50.307	163	70	4	14	167	10	170	4.47e-49	165
Msa0922830	AT4G36160.2	50.307	163	70	4	14	167	14	174	4.84e-49	165
Msa0922830	AT3G17730.1	52.903	155	63	4	12	158	4	156	7.47e-49	160
Msa0922830	AT1G79580.3	50.000	156	71	2	10	159	13	167	9.65e-49	164
Msa0922830	AT1G79580.5	50.000	156	71	2	10	159	13	167	9.65e-49	164
Msa0922830	AT1G79580.4	50.000	156	71	2	10	159	13	167	9.65e-49	164
Msa0922830	AT1G79580.2	50.000	156	71	2	10	159	13	167	9.65e-49	164
Msa0922830	AT1G79580.1	50.000	156	71	2	10	159	13	167	9.65e-49	164
Msa0922830	AT3G12977.1	50.000	160	71	4	11	163	15	172	1.79e-48	160
Msa0922830	AT1G52890.1	51.250	160	70	3	11	164	11	168	3.06e-48	161
Msa0922830	AT5G46590.1	50.633	158	68	3	10	158	2	158	3.35e-48	160
Msa0922830	AT3G29035.1	48.876	178	79	4	11	180	21	194	4.24e-48	160
Msa0922830	AT1G71930.2	39.013	223	122	4	14	224	9	229	4.67e-48	160
Msa0922830	AT1G71930.1	39.013	223	122	4	14	224	9	229	4.67e-48	160
Msa0922830	AT4G35580.1	47.396	192	83	5	14	197	9	190	5.37e-48	165
Msa0922830	AT4G35580.3	47.396	192	83	5	14	197	9	190	7.39e-48	165
Msa0922830	AT4G35580.2	47.396	192	83	5	14	197	9	190	7.58e-48	165
Msa0922830	AT3G61910.1	44.565	184	77	6	4	165	1	181	1.06e-47	160
Msa0922830	AT2G46770.1	46.067	178	72	4	4	159	6	181	1.21e-47	160
Msa0922830	AT1G32770.1	45.198	177	76	4	2	159	4	178	1.80e-47	160
Msa0922830	AT1G33060.1	52.941	153	62	3	14	158	24	174	2.32e-47	165
Msa0922830	AT1G33060.2	52.941	153	62	3	14	158	24	174	2.52e-47	165
Msa0922830	AT1G52880.1	53.086	162	60	3	18	163	21	182	2.76e-47	159
Msa0922830	AT5G63790.1	45.729	199	86	4	10	197	46	233	4.54e-47	158
Msa0922830	AT5G63790.2	45.729	199	86	4	10	197	56	243	4.90e-47	158
Msa0922830	AT3G15500.1	50.625	160	71	3	11	164	11	168	7.65e-47	157
Msa0922830	AT3G10500.1	41.892	222	112	5	14	222	9	226	1.08e-46	162
Msa0922830	AT3G10490.1	50.617	162	69	3	14	166	27	186	1.21e-46	154
Msa0922830	AT5G08790.1	53.416	161	59	5	11	159	4	160	1.98e-46	155
Msa0922830	AT3G10480.1	51.235	162	68	3	14	166	27	186	2.03e-46	159
Msa0922830	AT5G04410.1	50.920	163	70	3	14	168	9	169	4.81e-46	160
Msa0922830	AT1G56010.2	46.626	163	75	4	11	163	16	176	7.57e-46	155
Msa0922830	AT2G33480.3	50.676	148	68	2	59	203	3	148	7.94e-46	152
Msa0922830	AT3G10480.2	50.932	161	69	3	14	166	27	185	3.11e-45	156
Msa0922830	AT5G46590.2	49.655	145	67	2	10	149	2	145	6.88e-45	151
Msa0922830	AT4G17980.1	47.170	159	74	2	10	158	2	160	8.77e-45	150
Msa0922830	AT3G10490.2	50.617	162	69	3	14	166	27	186	1.00e-44	155
Msa0922830	AT4G17980.2	47.170	159	74	2	10	158	2	160	1.37e-44	151
Msa0922830	AT4G28530.1	47.305	167	68	4	13	160	9	174	6.68e-44	150
Msa0922830	AT5G39820.1	45.294	170	66	3	16	158	22	191	1.41e-42	147
Msa0922830	AT2G17040.1	48.980	147	69	3	16	158	8	152	1.39e-41	142
Msa0922830	AT3G10480.3	42.564	195	68	3	14	166	27	219	1.54e-41	148
Msa0922830	AT1G26870.1	39.224	232	118	7	11	220	13	243	1.79e-41	146
Msa0922830	AT3G49530.2	40.000	215	112	4	14	220	13	218	1.93e-41	145
Msa0922830	AT1G32510.1	38.696	230	119	6	14	222	6	234	3.01e-41	142
Msa0922830	AT3G49530.1	40.000	215	112	4	14	220	13	218	3.68e-41	146
Msa0922830	AT2G02450.1	43.316	187	91	5	16	198	53	228	4.66e-41	144
Msa0922830	AT2G02450.2	43.316	187	91	5	16	198	53	228	6.79e-41	144
Msa0922830	AT1G34180.3	48.148	162	72	4	16	168	18	176	1.52e-40	144
Msa0922830	AT1G34190.1	48.466	163	70	5	16	168	18	176	1.85e-40	145
Msa0922830	AT5G24590.2	44.751	181	80	5	14	179	13	188	3.42e-40	143
Msa0922830	AT1G34180.1	48.148	162	72	4	16	168	18	176	5.57e-40	144
Msa0922830	AT1G34180.4	44.828	174	72	4	16	168	18	188	1.59e-39	141
Msa0922830	AT3G12910.1	45.342	161	68	5	16	156	23	183	3.64e-39	137
Msa0922830	AT1G34180.2	44.828	174	72	4	16	168	18	188	5.26e-39	142
Msa0922830	AT2G43000.1	47.973	148	68	4	16	156	20	165	8.44e-39	135
Msa0922830	AT5G64060.1	43.114	167	85	3	10	168	2	166	1.53e-38	137
Msa0922830	AT5G09330.5	43.523	193	96	5	10	193	2	190	2.38e-38	139
Msa0922830	AT5G09330.2	43.523	193	96	5	10	193	2	190	2.38e-38	139
Msa0922830	AT5G09330.4	43.523	193	96	5	10	193	2	190	2.38e-38	139
Msa0922830	AT5G09330.3	43.523	193	96	5	10	193	2	190	2.38e-38	139
Msa0922830	AT5G09330.1	43.523	193	96	5	10	193	2	190	2.38e-38	139
Msa0922830	AT5G22290.1	38.251	183	101	4	16	194	23	197	1.11e-36	131
Msa0922830	AT5G04395.1	44.828	145	63	2	11	138	25	169	8.02e-36	125
Msa0922830	AT3G44290.2	40.606	165	85	4	16	176	16	171	1.50e-35	125
Msa0922830	AT3G44290.1	35.909	220	117	6	16	220	16	226	1.58e-35	128
Msa0922830	AT2G27300.1	43.151	146	73	3	14	155	14	153	2.40e-35	128
Msa0922830	AT4G10350.2	54.545	99	40	2	64	159	18	114	2.49e-33	122
Msa0922830	AT5G64530.1	41.818	165	64	4	12	156	1	153	2.55e-33	119
Msa0922830	AT5G64530.2	47.692	130	53	3	12	138	1	118	1.08e-32	116
Msa0922830	AT1G32870.1	45.930	172	77	6	7	168	5	170	4.19e-32	122
Msa0922830	AT1G32870.2	45.930	172	77	6	7	168	5	170	4.25e-32	122
Msa0922830	AT1G32870.3	45.930	172	77	6	7	168	41	206	5.87e-32	122
Msa0922830	AT5G61430.2	53.774	106	42	3	64	164	6	109	2.44e-31	116
Msa0922830	AT5G14000.1	38.365	159	92	4	6	161	7	162	7.04e-31	113
Msa0922830	AT5G14000.2	40.136	147	83	3	7	150	8	152	1.10e-30	111
Msa0922830	AT3G12977.2	53.398	103	42	3	65	163	19	119	3.15e-30	112
Msa0922830	AT5G50820.1	38.542	192	95	8	6	184	8	189	4.94e-29	108
Msa0922830	AT1G02230.1	41.718	163	76	7	15	169	4	155	6.09e-29	111
Msa0922830	AT1G56010.1	49.020	102	44	2	68	163	10	109	1.39e-28	108
Msa0922830	AT1G02250.1	42.763	152	75	5	15	158	4	151	7.12e-28	108
Msa0922830	AT4G01550.1	39.216	153	84	4	17	162	7	157	2.06e-27	108
Msa0922830	AT3G44350.2	38.608	158	82	5	14	158	5	160	7.85e-26	100
Msa0922830	AT4G01520.1	38.854	157	84	6	15	163	5	157	2.31e-25	101
Msa0922830	AT5G22380.1	39.744	156	77	5	17	157	8	161	2.39e-25	99.8
Msa0922830	AT4G01540.4	39.355	155	82	6	17	163	7	157	3.59e-25	102
Msa0922830	AT4G01540.3	39.355	155	82	6	17	163	7	157	4.57e-25	102
Msa0922830	AT4G01540.2	39.355	155	82	6	17	163	7	157	4.79e-25	102
Msa0922830	AT4G01540.1	39.355	155	82	6	17	163	7	157	6.32e-25	102
Msa0922830	AT3G44350.1	40.288	139	72	4	14	143	5	141	2.85e-24	94.7
Msa0922830	AT4G28530.2	41.085	129	57	3	13	122	9	137	4.01e-23	95.5
Msa0922830	AT3G04420.2	38.411	151	82	5	15	158	4	150	4.41e-23	94.7
Msa0922830	AT3G04420.1	38.411	151	82	5	15	158	4	150	4.68e-23	95.5
Msa0922830	AT1G02220.1	38.125	160	77	7	15	164	4	151	2.82e-21	91.3
Msa0922830	AT2G18060.2	54.321	81	33	4	89	167	2	80	7.78e-21	88.6
Msa0922830	AT3G10490.4	48.837	86	38	2	85	166	3	86	1.24e-19	86.3
Msa0922830	AT3G10490.3	48.837	86	38	2	85	166	3	86	1.24e-19	86.3
Msa0922830	AT1G01010.1	35.443	158	79	7	17	158	6	156	1.16e-17	81.3
Msa0922830	AT2G43000.2	47.059	85	39	3	76	156	5	87	3.57e-17	77.0
Msa0922830	AT3G55210.1	32.571	175	86	8	14	165	11	176	3.65e-16	75.9
Msa0922830	AT3G56530.1	33.544	158	88	6	11	157	49	200	3.68e-15	73.6
Msa0922830	AT5G41090.1	27.950	161	94	5	14	159	8	161	4.44e-14	68.9
Msa0922830	AT5G22290.2	37.143	105	58	3	90	194	2	98	6.07e-14	68.9
Msa0922830	AT5G14000.3	54.545	55	25	0	7	61	8	62	1.60e-13	68.2
Msa0922830	AT4G29230.2	31.638	177	88	10	12	160	45	216	1.61e-13	69.3
Msa0922830	AT4G29230.1	31.638	177	88	10	12	160	46	217	1.72e-13	69.3
Msa0922830	AT4G29230.3	32.000	175	86	10	12	158	46	215	2.05e-13	68.9
Msa0922830	AT1G28470.1	31.098	164	90	9	14	158	77	236	1.07e-12	66.6
Msa0922830	AT5G56620.2	31.013	158	74	8	12	138	41	194	5.75e-12	64.7
Msa0922830	AT5G56620.3	31.013	158	74	8	12	138	41	194	5.93e-12	64.7
Msa0922830	AT5G56620.1	31.013	158	74	8	12	138	41	194	7.12e-12	64.3
Msa0922830	AT4G28500.1	29.121	182	101	9	14	171	59	236	3.39e-11	62.0

Find 50 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTCAATCCCATCCTCTTT+TGG	0.230199	6_2:+62478602	Msa0922830:CDS
AAGATCAACTTCAGGAATTA+TGG	0.254052	6_2:-62477798	None:intergenic
CCAAGCAATGACAGCAGTTT+TGG	0.265671	6_2:+62478479	Msa0922830:CDS
CTCTTAGATCGGTTCCCATT+TGG	0.336362	6_2:-62478088	None:intergenic
GAGCTACAAACTCTGGTTAC+TGG	0.339051	6_2:+62478110	Msa0922830:CDS
ATCTTTGCAAGTCTGATCCT+TGG	0.370348	6_2:+62477816	Msa0922830:CDS
AGAGGATGGGATTGAGGAGG+AGG	0.387672	6_2:-62478597	None:intergenic
TCTTTGCAAGTCTGATCCTT+GGG	0.393386	6_2:+62477817	Msa0922830:CDS
TCGGTTCCCATTTGGATACT+TGG	0.402648	6_2:-62478080	None:intergenic
TCAAAGACTCGTGAAATTGT+TGG	0.411629	6_2:+62478166	Msa0922830:CDS
ATTCATGATCCAATCAGTTC+TGG	0.414917	6_2:-62478236	None:intergenic
CTTCATCTGTTGGATGAAAA+CGG	0.429980	6_2:-62477721	None:intergenic
GGATGGGATTGAGGAGGAGG+AGG	0.435232	6_2:-62478594	None:intergenic
AAAGAAGCCAAGTATCCAAA+TGG	0.440359	6_2:+62478073	Msa0922830:CDS
CCAAAACTGCTGTCATTGCT+TGG	0.451138	6_2:-62478479	None:intergenic
TTCAACTTCAAGTTCAAAAG+TGG	0.453095	6_2:+62478523	Msa0922830:CDS
ACAACAAGTTCTTCATCTGT+TGG	0.464543	6_2:-62477731	None:intergenic
GACTTGCAAAGATCAACTTC+AGG	0.465462	6_2:-62477806	None:intergenic
GACCAAGGGGTTGGAGTGAG+AGG	0.467797	6_2:-62478275	None:intergenic
TTACTGGAAAGCTACTGGTT+TGG	0.467850	6_2:+62478126	Msa0922830:CDS
TCCAAAAGAGGATGGGATTG+AGG	0.467952	6_2:-62478603	None:intergenic
TTCCTCTCACTCCAACCCCT+TGG	0.471467	6_2:+62478273	Msa0922830:CDS
GGAATTATGGAAGCAGGTAA+AGG	0.486494	6_2:-62477785	None:intergenic
GAATTATGGAAGCAGGTAAA+GGG	0.488612	6_2:-62477784	None:intergenic
TCTGGTTACTGGAAAGCTAC+TGG	0.495455	6_2:+62478121	Msa0922830:CDS
CTCATGGTTCCAGAACTGAT+TGG	0.514422	6_2:+62478227	Msa0922830:CDS
GGTTGGAGTGAGAGGAAGTG+AGG	0.514880	6_2:-62478267	None:intergenic
TAAGCATTTCCAAAAGAGGA+TGG	0.519212	6_2:-62478611	None:intergenic
AATGGAGAGGAGACAGTGAA+AGG	0.524667	6_2:+62478449	Msa0922830:CDS
AAGAAGCCAAGTATCCAAAT+GGG	0.526074	6_2:+62478074	Msa0922830:CDS
ACTTCAGGAATTATGGAAGC+AGG	0.531208	6_2:-62477791	None:intergenic
GTATTAAGCATTTCCAAAAG+AGG	0.532359	6_2:-62478615	None:intergenic
AAGCATTTCCAAAAGAGGAT+GGG	0.533996	6_2:-62478610	None:intergenic
AGTTTGTAGCTCTCTTAGAT+CGG	0.542330	6_2:-62478099	None:intergenic
TCTAAGAGAGCTACAAACTC+TGG	0.543930	6_2:+62478103	Msa0922830:CDS
TGTTCAATACTTGAAGCGTA+AGG	0.550952	6_2:+62477751	Msa0922830:CDS
AGAAAGACAGACCAAGGGGT+TGG	0.554284	6_2:-62478284	None:intergenic
TCTGATCCTTGGGATTTACC+TGG	0.570788	6_2:+62477827	Msa0922830:CDS
TGTGTCGCATATTTCTGAAG+AGG	0.578122	6_2:+62478411	Msa0922830:CDS
TACAGAGGCAAACCACCTCA+TGG	0.581454	6_2:+62478211	Msa0922830:CDS
CGCATATTTCTGAAGAGGAG+AGG	0.611502	6_2:+62478416	Msa0922830:CDS
TACATACCAGGTAAATCCCA+AGG	0.614952	6_2:-62477833	None:intergenic
GTTGGATGAAAACGGAAACC+TGG	0.621096	6_2:-62477713	None:intergenic
GGTGAAGTGAGATTGCCACC+AGG	0.631641	6_2:+62477695	Msa0922830:CDS
TCAGTTCTGGAACCATGAGG+TGG	0.656678	6_2:-62478223	None:intergenic
AAAAGAGGATGGGATTGAGG+AGG	0.660083	6_2:-62478600	None:intergenic
TAGGTGATATGGAACAAGAG+AGG	0.664397	6_2:+62478035	Msa0922830:intron
ATATTTCTGAAGAGGAGAGG+TGG	0.674268	6_2:+62478419	Msa0922830:CDS
CAATCAGTTCTGGAACCATG+AGG	0.718936	6_2:-62478226	None:intergenic
GGATGAAAACGGAAACCTGG+TGG	0.761895	6_2:-62477710	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGAAAAGAAAAGAAAAGAAA+AGG	-	chr6_2:62477859-62477878	None:intergenic	20.0%
!!!	AGTTTAGTCTTGTAATTTAA+AGG	+	chr6_2:62478332-62478351	Msa0922830:intron	20.0%
!!	AGAAAAGAAAAGAAAAGAAA+AGG	-	chr6_2:62477859-62477878	None:intergenic	20.0%
!!!	AGTTTAGTCTTGTAATTTAA+AGG	+	chr6_2:62478332-62478351	Msa0922830:intron	20.0%
!!	AAGATGAATTTTGTGAAGAA+TGG	+	chr6_2:62477674-62477693	Msa0922830:CDS	25.0%
!!	AAGATGAATTTTGTGAAGAA+TGG	+	chr6_2:62477674-62477693	Msa0922830:CDS	25.0%
	AAGATCAACTTCAGGAATTA+TGG	-	chr6_2:62477801-62477820	None:intergenic	30.0%
	TAGTAGAAGTTATCATGTTC+CGG	-	chr6_2:62477963-62477982	None:intergenic	30.0%
!!	TGTTGTTCTTTTAGGTGATA+TGG	+	chr6_2:62478024-62478043	Msa0922830:intron	30.0%
!!!	AAAACTCTTGTTTTCTACAG+AGG	+	chr6_2:62478196-62478215	Msa0922830:CDS	30.0%
!	GGTTTTGCAGAATGAAAATT+GGG	+	chr6_2:62478385-62478404	Msa0922830:intron	30.0%
!	TTCAACTTCAAGTTCAAAAG+TGG	+	chr6_2:62478523-62478542	Msa0922830:CDS	30.0%
!!	GGTTGTTTTCTATGATTTCT+TGG	+	chr6_2:62478544-62478563	Msa0922830:CDS	30.0%
	AAGATCAACTTCAGGAATTA+TGG	-	chr6_2:62477801-62477820	None:intergenic	30.0%
	TAGTAGAAGTTATCATGTTC+CGG	-	chr6_2:62477963-62477982	None:intergenic	30.0%
!!	TGTTGTTCTTTTAGGTGATA+TGG	+	chr6_2:62478024-62478043	Msa0922830:intron	30.0%
!!!	AAAACTCTTGTTTTCTACAG+AGG	+	chr6_2:62478196-62478215	Msa0922830:CDS	30.0%
!	GGTTTTGCAGAATGAAAATT+GGG	+	chr6_2:62478385-62478404	Msa0922830:intron	30.0%
!	TTCAACTTCAAGTTCAAAAG+TGG	+	chr6_2:62478523-62478542	Msa0922830:CDS	30.0%
!!	GGTTGTTTTCTATGATTTCT+TGG	+	chr6_2:62478544-62478563	Msa0922830:CDS	30.0%
	CTTCATCTGTTGGATGAAAA+CGG	-	chr6_2:62477724-62477743	None:intergenic	35.0%
	ACAACAAGTTCTTCATCTGT+TGG	-	chr6_2:62477734-62477753	None:intergenic	35.0%
	TGTTCAATACTTGAAGCGTA+AGG	+	chr6_2:62477751-62477770	Msa0922830:CDS	35.0%
	GAATTATGGAAGCAGGTAAA+GGG	-	chr6_2:62477787-62477806	None:intergenic	35.0%
!	GAAAAGAAAAGGTACATACC+AGG	-	chr6_2:62477848-62477867	None:intergenic	35.0%
!!	TGAGTGTGTGTTGTTCTTTT+AGG	+	chr6_2:62478016-62478035	Msa0922830:intron	35.0%
	AAAGAAGCCAAGTATCCAAA+TGG	+	chr6_2:62478073-62478092	Msa0922830:CDS	35.0%
	AAGAAGCCAAGTATCCAAAT+GGG	+	chr6_2:62478074-62478093	Msa0922830:CDS	35.0%
	AGTTTGTAGCTCTCTTAGAT+CGG	-	chr6_2:62478102-62478121	None:intergenic	35.0%
	TCAAAGACTCGTGAAATTGT+TGG	+	chr6_2:62478166-62478185	Msa0922830:CDS	35.0%
	ATTCATGATCCAATCAGTTC+TGG	-	chr6_2:62478239-62478258	None:intergenic	35.0%
	TTCAAAGAAAGACAGACCAA+GGG	-	chr6_2:62478292-62478311	None:intergenic	35.0%
	ATTCAAAGAAAGACAGACCA+AGG	-	chr6_2:62478293-62478312	None:intergenic	35.0%
!	GGGTTTTGCAGAATGAAAAT+TGG	+	chr6_2:62478384-62478403	Msa0922830:intron	35.0%
	AAGCATTTCCAAAAGAGGAT+GGG	-	chr6_2:62478613-62478632	None:intergenic	35.0%
	TAAGCATTTCCAAAAGAGGA+TGG	-	chr6_2:62478614-62478633	None:intergenic	35.0%
	CTTCATCTGTTGGATGAAAA+CGG	-	chr6_2:62477724-62477743	None:intergenic	35.0%
	ACAACAAGTTCTTCATCTGT+TGG	-	chr6_2:62477734-62477753	None:intergenic	35.0%
	TGTTCAATACTTGAAGCGTA+AGG	+	chr6_2:62477751-62477770	Msa0922830:CDS	35.0%
	GAATTATGGAAGCAGGTAAA+GGG	-	chr6_2:62477787-62477806	None:intergenic	35.0%
!	GAAAAGAAAAGGTACATACC+AGG	-	chr6_2:62477848-62477867	None:intergenic	35.0%
!!	TGAGTGTGTGTTGTTCTTTT+AGG	+	chr6_2:62478016-62478035	Msa0922830:intron	35.0%
	AAAGAAGCCAAGTATCCAAA+TGG	+	chr6_2:62478073-62478092	Msa0922830:CDS	35.0%
	AAGAAGCCAAGTATCCAAAT+GGG	+	chr6_2:62478074-62478093	Msa0922830:CDS	35.0%
	AGTTTGTAGCTCTCTTAGAT+CGG	-	chr6_2:62478102-62478121	None:intergenic	35.0%
	TCAAAGACTCGTGAAATTGT+TGG	+	chr6_2:62478166-62478185	Msa0922830:CDS	35.0%
	ATTCATGATCCAATCAGTTC+TGG	-	chr6_2:62478239-62478258	None:intergenic	35.0%
	TTCAAAGAAAGACAGACCAA+GGG	-	chr6_2:62478292-62478311	None:intergenic	35.0%
	ATTCAAAGAAAGACAGACCA+AGG	-	chr6_2:62478293-62478312	None:intergenic	35.0%
!	GGGTTTTGCAGAATGAAAAT+TGG	+	chr6_2:62478384-62478403	Msa0922830:intron	35.0%
	AAGCATTTCCAAAAGAGGAT+GGG	-	chr6_2:62478613-62478632	None:intergenic	35.0%
	TAAGCATTTCCAAAAGAGGA+TGG	-	chr6_2:62478614-62478633	None:intergenic	35.0%
	GGAATTATGGAAGCAGGTAA+AGG	-	chr6_2:62477788-62477807	None:intergenic	40.0%
	ACTTCAGGAATTATGGAAGC+AGG	-	chr6_2:62477794-62477813	None:intergenic	40.0%
	GACTTGCAAAGATCAACTTC+AGG	-	chr6_2:62477809-62477828	None:intergenic	40.0%
	ATCTTTGCAAGTCTGATCCT+TGG	+	chr6_2:62477816-62477835	Msa0922830:CDS	40.0%
	TCTTTGCAAGTCTGATCCTT+GGG	+	chr6_2:62477817-62477836	Msa0922830:CDS	40.0%
	TACATACCAGGTAAATCCCA+AGG	-	chr6_2:62477836-62477855	None:intergenic	40.0%
	CTACTGCAAACAATGTCATG+TGG	+	chr6_2:62477986-62478005	Msa0922830:intron	40.0%
	TAGGTGATATGGAACAAGAG+AGG	+	chr6_2:62478035-62478054	Msa0922830:intron	40.0%
	TCTAAGAGAGCTACAAACTC+TGG	+	chr6_2:62478103-62478122	Msa0922830:CDS	40.0%
!	TTACTGGAAAGCTACTGGTT+TGG	+	chr6_2:62478126-62478145	Msa0922830:CDS	40.0%
	TCAAAGAAAGACAGACCAAG+GGG	-	chr6_2:62478291-62478310	None:intergenic	40.0%
!	TGTGTCGCATATTTCTGAAG+AGG	+	chr6_2:62478411-62478430	Msa0922830:CDS	40.0%
!	ATATTTCTGAAGAGGAGAGG+TGG	+	chr6_2:62478419-62478438	Msa0922830:CDS	40.0%
	GGAATTATGGAAGCAGGTAA+AGG	-	chr6_2:62477788-62477807	None:intergenic	40.0%
	ACTTCAGGAATTATGGAAGC+AGG	-	chr6_2:62477794-62477813	None:intergenic	40.0%
	GACTTGCAAAGATCAACTTC+AGG	-	chr6_2:62477809-62477828	None:intergenic	40.0%
	ATCTTTGCAAGTCTGATCCT+TGG	+	chr6_2:62477816-62477835	Msa0922830:CDS	40.0%
	TCTTTGCAAGTCTGATCCTT+GGG	+	chr6_2:62477817-62477836	Msa0922830:CDS	40.0%
	TACATACCAGGTAAATCCCA+AGG	-	chr6_2:62477836-62477855	None:intergenic	40.0%
	CTACTGCAAACAATGTCATG+TGG	+	chr6_2:62477986-62478005	Msa0922830:intron	40.0%
	TAGGTGATATGGAACAAGAG+AGG	+	chr6_2:62478035-62478054	Msa0922830:intron	40.0%
	TCTAAGAGAGCTACAAACTC+TGG	+	chr6_2:62478103-62478122	Msa0922830:CDS	40.0%
!	TTACTGGAAAGCTACTGGTT+TGG	+	chr6_2:62478126-62478145	Msa0922830:CDS	40.0%
	TCAAAGAAAGACAGACCAAG+GGG	-	chr6_2:62478291-62478310	None:intergenic	40.0%
!	TGTGTCGCATATTTCTGAAG+AGG	+	chr6_2:62478411-62478430	Msa0922830:CDS	40.0%
!	ATATTTCTGAAGAGGAGAGG+TGG	+	chr6_2:62478419-62478438	Msa0922830:CDS	40.0%
	GTTGGATGAAAACGGAAACC+TGG	-	chr6_2:62477716-62477735	None:intergenic	45.0%
	TCTGATCCTTGGGATTTACC+TGG	+	chr6_2:62477827-62477846	Msa0922830:CDS	45.0%
	TGAAGCACAGACACAGACAT+CGG	+	chr6_2:62477907-62477926	Msa0922830:intron	45.0%
	ACACTGACAGATTCAGACAC+CGG	+	chr6_2:62477941-62477960	Msa0922830:intron	45.0%
	TCGGTTCCCATTTGGATACT+TGG	-	chr6_2:62478083-62478102	None:intergenic	45.0%
!	CTCTTAGATCGGTTCCCATT+TGG	-	chr6_2:62478091-62478110	None:intergenic	45.0%
	GAGCTACAAACTCTGGTTAC+TGG	+	chr6_2:62478110-62478129	Msa0922830:CDS	45.0%
	TCTGGTTACTGGAAAGCTAC+TGG	+	chr6_2:62478121-62478140	Msa0922830:CDS	45.0%
!!	CAATCAGTTCTGGAACCATG+AGG	-	chr6_2:62478229-62478248	None:intergenic	45.0%
	CTCATGGTTCCAGAACTGAT+TGG	+	chr6_2:62478227-62478246	Msa0922830:CDS	45.0%
!	CGCATATTTCTGAAGAGGAG+AGG	+	chr6_2:62478416-62478435	Msa0922830:CDS	45.0%
!	AGGAGAGGTGGTGCTAAAAA+TGG	+	chr6_2:62478431-62478450	Msa0922830:CDS	45.0%
!	AGGTGGTGCTAAAAATGGAG+AGG	+	chr6_2:62478436-62478455	Msa0922830:CDS	45.0%
	AATGGAGAGGAGACAGTGAA+AGG	+	chr6_2:62478449-62478468	Msa0922830:CDS	45.0%
	CCAAAACTGCTGTCATTGCT+TGG	-	chr6_2:62478482-62478501	None:intergenic	45.0%
!	CCAAGCAATGACAGCAGTTT+TGG	+	chr6_2:62478479-62478498	Msa0922830:CDS	45.0%
!!	CAATGACAGCAGTTTTGGTG+AGG	+	chr6_2:62478484-62478503	Msa0922830:CDS	45.0%
	AAAAGAGGATGGGATTGAGG+AGG	-	chr6_2:62478603-62478622	None:intergenic	45.0%
!	TCCTCAATCCCATCCTCTTT+TGG	+	chr6_2:62478602-62478621	Msa0922830:CDS	45.0%
	TCCAAAAGAGGATGGGATTG+AGG	-	chr6_2:62478606-62478625	None:intergenic	45.0%
	GTTGGATGAAAACGGAAACC+TGG	-	chr6_2:62477716-62477735	None:intergenic	45.0%
	TCTGATCCTTGGGATTTACC+TGG	+	chr6_2:62477827-62477846	Msa0922830:CDS	45.0%
	TGAAGCACAGACACAGACAT+CGG	+	chr6_2:62477907-62477926	Msa0922830:intron	45.0%
	ACACTGACAGATTCAGACAC+CGG	+	chr6_2:62477941-62477960	Msa0922830:intron	45.0%
	TCGGTTCCCATTTGGATACT+TGG	-	chr6_2:62478083-62478102	None:intergenic	45.0%
!	CTCTTAGATCGGTTCCCATT+TGG	-	chr6_2:62478091-62478110	None:intergenic	45.0%
	GAGCTACAAACTCTGGTTAC+TGG	+	chr6_2:62478110-62478129	Msa0922830:CDS	45.0%
	TCTGGTTACTGGAAAGCTAC+TGG	+	chr6_2:62478121-62478140	Msa0922830:CDS	45.0%
!!	CAATCAGTTCTGGAACCATG+AGG	-	chr6_2:62478229-62478248	None:intergenic	45.0%
	CTCATGGTTCCAGAACTGAT+TGG	+	chr6_2:62478227-62478246	Msa0922830:CDS	45.0%
!	CGCATATTTCTGAAGAGGAG+AGG	+	chr6_2:62478416-62478435	Msa0922830:CDS	45.0%
!	AGGAGAGGTGGTGCTAAAAA+TGG	+	chr6_2:62478431-62478450	Msa0922830:CDS	45.0%
!	AGGTGGTGCTAAAAATGGAG+AGG	+	chr6_2:62478436-62478455	Msa0922830:CDS	45.0%
	AATGGAGAGGAGACAGTGAA+AGG	+	chr6_2:62478449-62478468	Msa0922830:CDS	45.0%
	CCAAAACTGCTGTCATTGCT+TGG	-	chr6_2:62478482-62478501	None:intergenic	45.0%
!	CCAAGCAATGACAGCAGTTT+TGG	+	chr6_2:62478479-62478498	Msa0922830:CDS	45.0%
!!	CAATGACAGCAGTTTTGGTG+AGG	+	chr6_2:62478484-62478503	Msa0922830:CDS	45.0%
	AAAAGAGGATGGGATTGAGG+AGG	-	chr6_2:62478603-62478622	None:intergenic	45.0%
!	TCCTCAATCCCATCCTCTTT+TGG	+	chr6_2:62478602-62478621	Msa0922830:CDS	45.0%
	TCCAAAAGAGGATGGGATTG+AGG	-	chr6_2:62478606-62478625	None:intergenic	45.0%
!!	TAATATTAATATGAATAAAT+TGG	+	chr6_2:62478363-62478382	Msa0922830:intron	5.0%
!!	AATATTAATATGAATAAATT+GGG	+	chr6_2:62478364-62478383	Msa0922830:intron	5.0%
!!	TAATATTAATATGAATAAAT+TGG	+	chr6_2:62478363-62478382	Msa0922830:intron	5.0%
!!	AATATTAATATGAATAAATT+GGG	+	chr6_2:62478364-62478383	Msa0922830:intron	5.0%
	GGATGAAAACGGAAACCTGG+TGG	-	chr6_2:62477713-62477732	None:intergenic	50.0%
	CACAGACATCGGACACAACA+TGG	+	chr6_2:62477918-62477937	Msa0922830:intron	50.0%
	TACAGAGGCAAACCACCTCA+TGG	+	chr6_2:62478211-62478230	Msa0922830:CDS	50.0%
!!	TCAGTTCTGGAACCATGAGG+TGG	-	chr6_2:62478226-62478245	None:intergenic	50.0%
	AGAAAGACAGACCAAGGGGT+TGG	-	chr6_2:62478287-62478306	None:intergenic	50.0%
	GGATGAAAACGGAAACCTGG+TGG	-	chr6_2:62477713-62477732	None:intergenic	50.0%
	CACAGACATCGGACACAACA+TGG	+	chr6_2:62477918-62477937	Msa0922830:intron	50.0%
	TACAGAGGCAAACCACCTCA+TGG	+	chr6_2:62478211-62478230	Msa0922830:CDS	50.0%
!!	TCAGTTCTGGAACCATGAGG+TGG	-	chr6_2:62478226-62478245	None:intergenic	50.0%
	AGAAAGACAGACCAAGGGGT+TGG	-	chr6_2:62478287-62478306	None:intergenic	50.0%
	GGTGAAGTGAGATTGCCACC+AGG	+	chr6_2:62477695-62477714	Msa0922830:CDS	55.0%
	GGTTGGAGTGAGAGGAAGTG+AGG	-	chr6_2:62478270-62478289	None:intergenic	55.0%
	TTCCTCTCACTCCAACCCCT+TGG	+	chr6_2:62478273-62478292	Msa0922830:CDS	55.0%
	AGAGGATGGGATTGAGGAGG+AGG	-	chr6_2:62478600-62478619	None:intergenic	55.0%
	GGTGAAGTGAGATTGCCACC+AGG	+	chr6_2:62477695-62477714	Msa0922830:CDS	55.0%
	GGTTGGAGTGAGAGGAAGTG+AGG	-	chr6_2:62478270-62478289	None:intergenic	55.0%
	TTCCTCTCACTCCAACCCCT+TGG	+	chr6_2:62478273-62478292	Msa0922830:CDS	55.0%
	AGAGGATGGGATTGAGGAGG+AGG	-	chr6_2:62478600-62478619	None:intergenic	55.0%
	GACCAAGGGGTTGGAGTGAG+AGG	-	chr6_2:62478278-62478297	None:intergenic	60.0%
	GGATGGGATTGAGGAGGAGG+AGG	-	chr6_2:62478597-62478616	None:intergenic	60.0%
	GACCAAGGGGTTGGAGTGAG+AGG	-	chr6_2:62478278-62478297	None:intergenic	60.0%
	GGATGGGATTGAGGAGGAGG+AGG	-	chr6_2:62478597-62478616	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_2	gene	62477668	62478634	62477668	ID=Msa0922830;Name=Msa0922830
chr6_2	mRNA	62477668	62478634	62477668	ID=Msa0922830-mRNA-1;Parent=Msa0922830;Name=Msa0922830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0\|0\|0\|1\|1\|1\|3\|0\|225
chr6_2	exon	62477668	62477848	62477668	ID=Msa0922830-mRNA-1:exon:9676;Parent=Msa0922830-mRNA-1
chr6_2	exon	62478038	62478294	62478038	ID=Msa0922830-mRNA-1:exon:9677;Parent=Msa0922830-mRNA-1
chr6_2	exon	62478395	62478634	62478395	ID=Msa0922830-mRNA-1:exon:9678;Parent=Msa0922830-mRNA-1
chr6_2	CDS	62477668	62477848	62477668	ID=Msa0922830-mRNA-1:cds;Parent=Msa0922830-mRNA-1
chr6_2	CDS	62478038	62478294	62478038	ID=Msa0922830-mRNA-1:cds;Parent=Msa0922830-mRNA-1
chr6_2	CDS	62478395	62478634	62478395	ID=Msa0922830-mRNA-1:cds;Parent=Msa0922830-mRNA-1

Gene Sequence

>Msa0922830

ATGGACAAGATGAATTTTGTGAAGAATGGTGAAGTGAGATTGCCACCAGGTTTCCGTTTTCATCCAACAGATGAAGAACTTGTTGTTCAATACTTGAAGCGTAAGGTCTTCTCTTTCCCTTTACCTGCTTCCATAATTCCTGAAGTTGATCTTTGCAAGTCTGATCCTTGGGATTTACCTGGTGATATGGAACAAGAGAGGTACTTTTTCAGTAGAAAAGAAGCCAAGTATCCAAATGGGAACCGATCTAAGAGAGCTACAAACTCTGGTTACTGGAAAGCTACTGGTTTGGACAAACAAATCATGAATTCAAAGACTCGTGAAATTGTTGGCATGAAGAAAACTCTTGTTTTCTACAGAGGCAAACCACCTCATGGTTCCAGAACTGATTGGATCATGAATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGAATGAAAATTGGGTTCTGTGTCGCATATTTCTGAAGAGGAGAGGTGGTGCTAAAAATGGAGAGGAGACAGTGAAAGGAGTGAAGCCAAGCAATGACAGCAGTTTTGGTGAGGTGAAGAAGAACTCAGCTTCAACTTCAAGTTCAAAAGTGGTTGTTTTCTATGATTTCTTGGCAGAGAAGAAGAAAAATTCTGATGCATCCTCCTCCTCCTCAATCCCATCCTCTTTTGGAAATGCTTAA

Protein sequence

>Msa0922830

MDKMNFVKNGEVRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDLCKSDPWDLPGDMEQERYFFSRKEAKYPNGNRSKRATNSGYWKATGLDKQIMNSKTREIVGMKKTLVFYRGKPPHGSRTDWIMNEYRLTSSHSNPLNENWVLCRIFLKRRGGAKNGEETVKGVKPSNDSSFGEVKKNSASTSSSKVVVFYDFLAEKKKNSDASSSSSIPSSFGNA*