AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0928140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928140 MtrunA17_Chr6g0484441 96.452 310 8 1 1 310 1 307 0.0 622
Msa0928140 MtrunA17_Chr4g0060931 66.332 199 54 4 4 198 16 205 9.84e-89 270
Msa0928140 MtrunA17_Chr3g0091921 57.384 237 88 4 5 229 16 251 1.15e-88 267
Msa0928140 MtrunA17_Chr3g0139331 71.429 175 38 2 2 174 8 172 1.00e-86 264
Msa0928140 MtrunA17_Chr1g0147421 76.730 159 34 2 2 157 24 182 4.81e-85 260
Msa0928140 MtrunA17_Chr2g0316971 75.796 157 32 3 2 152 20 176 4.95e-83 256
Msa0928140 MtrunA17_Chr6g0453451 70.701 157 42 1 5 157 20 176 9.80e-82 250
Msa0928140 MtrunA17_Chr7g0253011 67.665 167 46 3 4 162 16 182 1.34e-77 242
Msa0928140 MtrunA17_Chr7g0217721 63.473 167 44 2 8 157 22 188 4.35e-70 221
Msa0928140 MtrunA17_Chr6g0461661 63.095 168 53 4 4 164 17 182 5.66e-70 222
Msa0928140 MtrunA17_Chr2g0312321 44.106 263 134 6 1 258 7 261 9.30e-69 216
Msa0928140 MtrunA17_Chr3g0144271 61.143 175 57 5 2 170 20 189 1.00e-65 213
Msa0928140 MtrunA17_Chr7g0217711 71.654 127 36 0 5 131 19 145 2.10e-64 201
Msa0928140 MtrunA17_Chr4g0018391 50.521 192 89 2 4 192 6 194 1.49e-62 202
Msa0928140 MtrunA17_Chr4g0056541 53.801 171 73 3 4 171 6 173 7.98e-61 198
Msa0928140 MtrunA17_Chr5g0398971 42.913 254 131 7 4 252 6 250 3.89e-60 196
Msa0928140 MtrunA17_Chr8g0359921 57.595 158 63 2 4 157 13 170 1.18e-59 194
Msa0928140 MtrunA17_Chr7g0252971 55.422 166 59 4 2 152 5 170 1.35e-59 194
Msa0928140 MtrunA17_Chr2g0318081 56.051 157 67 1 4 158 15 171 1.87e-59 194
Msa0928140 MtrunA17_Chr4g0042561 45.714 210 102 2 5 208 9 212 2.36e-59 191
Msa0928140 MtrunA17_Chr2g0318101 40.072 277 133 7 2 253 12 280 4.69e-59 193
Msa0928140 MtrunA17_Chr2g0309331 40.244 246 123 3 2 243 7 232 5.46e-59 192
Msa0928140 MtrunA17_Chr5g0405211 54.545 154 67 1 1 151 4 157 9.11e-59 192
Msa0928140 MtrunA17_Chr4g0017921 60.000 150 56 2 5 151 8 156 1.01e-58 192
Msa0928140 MtrunA17_Chr2g0309891 57.143 154 61 2 5 153 6 159 2.06e-58 191
Msa0928140 MtrunA17_Chr1g0183741 57.047 149 60 2 5 151 10 156 8.86e-58 187
Msa0928140 MtrunA17_Chr3g0124761 55.280 161 66 2 2 157 4 163 8.94e-58 188
Msa0928140 MtrunA17_Chr1g0200561 50.932 161 76 1 1 158 15 175 1.39e-57 189
Msa0928140 MtrunA17_Chr4g0047841 50.532 188 66 4 5 165 15 202 1.40e-57 189
Msa0928140 MtrunA17_Chr6g0481091 48.744 199 92 5 5 197 6 200 1.58e-57 186
Msa0928140 MtrunA17_Chr8g0372121 50.943 159 75 1 1 156 2 160 3.11e-57 187
Msa0928140 MtrunA17_Chr5g0417791 53.165 158 68 1 5 156 3 160 3.34e-57 185
Msa0928140 MtrunA17_Chr5g0433781 58.553 152 59 2 5 152 6 157 1.28e-56 193
Msa0928140 MtrunA17_Chr7g0263931 55.063 158 63 2 2 151 8 165 2.29e-56 185
Msa0928140 MtrunA17_Chr3g0109821 58.170 153 59 2 5 152 6 158 4.04e-56 192
Msa0928140 MtrunA17_Chr7g0261411 56.081 148 61 2 5 150 10 155 4.32e-56 184
Msa0928140 MtrunA17_Chr8g0346001 51.220 164 66 2 2 151 12 175 4.73e-55 185
Msa0928140 MtrunA17_Chr8g0384721 51.429 175 71 4 5 168 7 178 1.37e-54 179
Msa0928140 MtrunA17_Chr3g0130731 54.601 163 64 3 2 157 4 163 7.91e-54 177
Msa0928140 MtrunA17_Chr2g0326361 52.500 160 68 2 5 156 14 173 2.67e-52 175
Msa0928140 MtrunA17_Chr7g0214071 51.266 158 72 2 2 157 12 166 1.71e-51 171
Msa0928140 MtrunA17_Chr3g0092671 54.194 155 67 3 7 157 7 161 3.09e-49 172
Msa0928140 MtrunA17_Chr6g0453131 37.050 278 150 7 3 258 13 287 5.09e-49 168
Msa0928140 MtrunA17_Chr8g0361731 45.882 170 79 3 1 157 10 179 5.62e-49 168
Msa0928140 MtrunA17_Chr5g0400461 49.682 157 69 3 4 151 5 160 1.14e-48 166
Msa0928140 MtrunA17_Chr5g0417001 46.154 169 79 3 1 157 10 178 2.19e-48 166
Msa0928140 MtrunA17_Chr1g0197361 52.258 155 70 3 7 157 10 164 3.79e-48 170
Msa0928140 MtrunA17_Chr5g0428991 52.318 151 68 2 5 151 25 175 2.87e-47 168
Msa0928140 MtrunA17_Chr3g0130101 51.678 149 68 2 7 151 9 157 2.93e-47 162
Msa0928140 MtrunA17_Chr3g0128111 50.676 148 69 2 8 151 45 192 5.00e-47 159
Msa0928140 MtrunA17_Chr3g0128151 52.318 151 68 2 5 151 22 172 5.26e-47 167
Msa0928140 MtrunA17_Chr4g0076731 48.077 156 74 2 7 158 56 208 5.35e-47 164
Msa0928140 MtrunA17_Chr4g0054791 43.429 175 86 4 4 168 5 176 1.90e-45 157
Msa0928140 MtrunA17_Chr8g0364791 48.344 151 74 2 5 151 6 156 6.86e-45 158
Msa0928140 MtrunA17_Chr3g0113001 66.055 109 32 2 54 157 14 122 2.73e-44 153
Msa0928140 MtrunA17_Chr1g0197351 50.633 158 68 2 4 151 41 198 5.77e-44 157
Msa0928140 MtrunA17_Chr1g0201021 48.667 150 73 2 7 152 21 170 2.38e-43 156
Msa0928140 MtrunA17_Chr8g0384201 47.020 151 76 2 5 151 6 156 6.86e-43 154
Msa0928140 MtrunA17_Chr2g0311651 36.596 235 124 6 2 216 18 247 1.54e-42 149
Msa0928140 MtrunA17_Chr4g0038751 42.073 164 89 2 7 167 17 177 7.22e-42 147
Msa0928140 MtrunA17_Chr2g0311661 42.286 175 82 4 2 157 17 191 9.25e-42 146
Msa0928140 MtrunA17_Chr5g0442771 41.860 172 82 3 2 157 15 184 1.10e-41 147
Msa0928140 MtrunA17_Chr8g0385991 43.137 153 76 3 5 148 14 164 5.28e-39 137
Msa0928140 MtrunA17_Chr3g0131911 41.975 162 80 3 5 154 14 173 1.26e-37 134
Msa0928140 MtrunA17_Chr8g0345671 46.667 150 71 5 4 148 10 155 2.51e-36 134
Msa0928140 MtrunA17_Chr3g0113031 55.462 119 47 2 66 178 1 119 5.38e-36 130
Msa0928140 MtrunA17_Chr4g0026141 40.719 167 88 6 1 156 1 167 6.59e-34 125
Msa0928140 MtrunA17_Chr8g0345691 44.371 151 75 6 3 148 10 156 3.77e-33 126
Msa0928140 MtrunA17_Chr2g0321741 47.826 115 54 2 35 148 22 131 7.51e-33 124
Msa0928140 MtrunA17_Chr2g0321631 39.103 156 83 6 6 149 5 160 1.78e-30 115
Msa0928140 MtrunA17_Chr4g0050701 33.854 192 106 4 5 186 11 191 3.39e-30 113
Msa0928140 MtrunA17_Chr7g0266701 39.024 164 86 6 3 152 2 165 6.78e-30 114
Msa0928140 MtrunA17_Chr8g0345711 43.609 133 69 5 1 128 8 139 8.11e-29 109
Msa0928140 MtrunA17_Chr8g0345701 40.994 161 68 7 4 145 6 158 9.76e-29 108
Msa0928140 MtrunA17_Chr8g0345731 40.260 154 80 6 5 151 24 172 2.67e-26 102
Msa0928140 MtrunA17_Chr8g0384351 41.060 151 63 6 5 151 10 138 3.12e-25 100
Msa0928140 MtrunA17_Chr8g0345721 34.132 167 70 5 1 128 26 191 2.06e-23 95.9
Msa0928140 MtrunA17_Chr7g0243371 51.899 79 36 1 58 134 17 95 2.57e-22 90.1
Msa0928140 MtrunA17_Chr8g0345741 39.831 118 65 5 16 128 2 118 9.08e-21 87.0
Msa0928140 MtrunA17_Chr3g0130321 35.802 162 80 6 5 150 7 160 2.23e-19 84.7
Msa0928140 MtrunA17_Chr3g0113011 67.347 49 16 0 5 53 19 67 1.19e-18 79.0
Msa0928140 MtrunA17_Chr7g0251661 33.846 130 80 5 2 128 7 133 9.25e-18 79.0
Msa0928140 MtrunA17_Chr3g0113041 68.889 45 14 0 9 53 23 67 1.73e-17 75.9
Msa0928140 MtrunA17_Chr7g0251651 29.412 153 102 5 5 154 18 167 2.17e-15 73.6
Msa0928140 MtrunA17_Chr4g0046431 30.366 191 110 6 5 179 68 251 2.34e-15 75.5
Msa0928140 MtrunA17_Chr2g0282871 32.317 164 92 6 5 152 53 213 4.18e-15 74.7
Msa0928140 MtrunA17_Chr7g0251671 29.710 138 91 4 1 135 6 140 1.32e-14 70.5
Msa0928140 MtrunA17_Chr5g0422431 30.726 179 106 7 5 168 58 233 3.91e-14 72.8
Msa0928140 MtrunA17_Chr8g0389661 30.270 185 95 8 5 164 47 222 5.78e-13 69.3
Msa0928140 MtrunA17_Chr1g0198751 30.000 180 106 9 5 168 58 233 9.93e-13 68.6
Msa0928140 MtrunA17_Chr2g0324961 33.793 145 75 5 4 130 48 189 2.80e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928140 AT3G18400.1 62.162 296 91 10 1 285 1 286 4.17e-114 333
Msa0928140 AT5G61430.1 75.316 158 35 2 4 157 15 172 5.67e-85 259
Msa0928140 AT5G53950.1 76.923 156 30 3 3 152 15 170 7.99e-84 258
Msa0928140 AT2G24430.2 75.472 159 36 2 2 157 13 171 1.53e-83 255
Msa0928140 AT2G24430.1 75.472 159 36 2 2 157 13 171 1.53e-83 255
Msa0928140 AT5G07680.2 72.152 158 40 2 4 157 2 159 1.92e-82 252
Msa0928140 AT5G07680.1 72.152 158 40 2 4 157 16 173 3.23e-82 252
Msa0928140 AT5G39610.1 73.418 158 38 1 4 157 19 176 5.86e-82 250
Msa0928140 AT5G18270.2 72.549 153 37 2 4 151 20 172 7.59e-80 246
Msa0928140 AT5G18270.1 71.895 153 38 2 4 151 20 172 2.69e-79 245
Msa0928140 AT3G04060.1 70.968 155 40 2 4 153 19 173 1.92e-77 240
Msa0928140 AT1G76420.1 69.620 158 45 2 2 156 19 176 2.63e-76 237
Msa0928140 AT3G29035.1 71.523 151 39 1 4 150 23 173 1.90e-75 234
Msa0928140 AT3G15170.1 57.282 206 79 5 2 201 17 219 2.74e-73 229
Msa0928140 AT1G56010.2 59.236 157 58 2 1 151 15 171 6.93e-65 207
Msa0928140 AT3G12977.1 59.740 154 59 2 1 151 14 167 1.45e-64 205
Msa0928140 AT4G27410.2 42.797 236 122 4 4 237 13 237 2.76e-62 200
Msa0928140 AT1G71930.2 50.932 161 76 1 1 158 5 165 2.23e-60 196
Msa0928140 AT1G71930.1 50.932 161 76 1 1 158 5 165 2.23e-60 196
Msa0928140 AT3G04070.2 46.256 227 90 7 4 205 9 228 4.28e-60 196
Msa0928140 AT3G10500.1 58.861 158 61 2 4 157 8 165 1.87e-59 199
Msa0928140 AT1G33280.1 51.613 186 74 3 5 175 8 192 3.33e-59 192
Msa0928140 AT5G62380.2 56.129 155 65 1 4 155 6 160 3.48e-59 194
Msa0928140 AT5G62380.1 56.129 155 65 1 4 155 6 160 3.48e-59 194
Msa0928140 AT4G27410.3 40.316 253 121 5 4 237 13 254 7.74e-59 192
Msa0928140 AT3G04070.1 43.388 242 89 6 5 205 10 244 1.20e-58 192
Msa0928140 AT1G12260.2 54.194 155 68 1 4 155 6 160 1.22e-58 192
Msa0928140 AT4G10350.1 59.211 152 57 2 5 151 9 160 1.28e-58 192
Msa0928140 AT1G12260.1 54.545 154 67 1 5 155 7 160 1.66e-58 193
Msa0928140 AT3G15500.1 55.769 156 67 1 4 157 13 168 9.31e-58 189
Msa0928140 AT5G04410.1 58.170 153 60 2 4 152 8 160 1.16e-57 195
Msa0928140 AT1G01720.1 44.828 232 96 6 4 206 6 234 1.28e-57 188
Msa0928140 AT3G03200.1 56.250 160 65 2 5 159 6 165 1.84e-57 192
Msa0928140 AT1G52890.1 56.129 155 66 1 5 157 14 168 2.42e-57 188
Msa0928140 AT2G18060.3 53.247 154 69 1 4 154 8 161 3.10e-57 189
Msa0928140 AT2G18060.1 53.247 154 69 1 4 154 8 161 3.10e-57 189
Msa0928140 AT1G62700.1 54.545 154 67 1 5 155 7 160 4.66e-57 189
Msa0928140 AT1G62700.2 54.545 154 67 1 5 155 7 160 4.66e-57 189
Msa0928140 AT4G36160.1 50.932 161 76 1 4 161 9 169 1.58e-56 187
Msa0928140 AT4G36160.3 50.932 161 76 1 4 161 9 169 1.58e-56 187
Msa0928140 AT4G36160.2 50.932 161 76 1 4 161 13 173 1.75e-56 187
Msa0928140 AT1G65910.1 54.375 160 69 2 5 160 6 165 2.68e-56 193
Msa0928140 AT5G17260.1 54.658 161 68 2 4 159 5 165 3.05e-56 189
Msa0928140 AT3G17730.1 55.921 152 63 2 4 151 5 156 3.95e-56 182
Msa0928140 AT5G66300.1 51.852 162 72 3 4 159 11 172 1.58e-55 182
Msa0928140 AT5G61430.2 76.852 108 21 2 54 157 2 109 1.85e-55 182
Msa0928140 AT5G08790.1 46.119 219 90 7 2 203 4 211 2.16e-55 182
Msa0928140 AT1G69490.1 48.108 185 88 2 2 178 6 190 4.84e-55 181
Msa0928140 AT2G46770.1 50.595 168 65 4 2 151 13 180 8.51e-55 183
Msa0928140 AT1G61110.1 51.190 168 67 2 4 156 15 182 1.36e-54 181
Msa0928140 AT3G61910.1 49.405 168 67 2 2 151 8 175 1.47e-54 181
Msa0928140 AT4G28530.1 53.939 165 56 3 5 151 10 172 1.78e-53 179
Msa0928140 AT1G33060.1 52.500 160 72 2 3 158 22 181 3.82e-53 184
Msa0928140 AT1G33060.2 52.500 160 72 2 3 158 22 181 4.19e-53 184
Msa0928140 AT1G77450.1 52.201 159 70 2 4 157 9 166 7.61e-53 174
Msa0928140 AT1G79580.3 54.305 151 64 3 5 151 17 166 1.18e-52 177
Msa0928140 AT1G79580.5 54.305 151 64 3 5 151 17 166 1.18e-52 177
Msa0928140 AT1G79580.4 54.305 151 64 3 5 151 17 166 1.18e-52 177
Msa0928140 AT1G79580.2 54.305 151 64 3 5 151 17 166 1.18e-52 177
Msa0928140 AT1G79580.1 54.305 151 64 3 5 151 17 166 1.18e-52 177
Msa0928140 AT5G63790.1 48.619 181 81 3 2 173 47 224 1.32e-52 176
Msa0928140 AT5G63790.2 48.619 181 81 3 2 173 57 234 1.37e-52 176
Msa0928140 AT1G54330.1 53.205 156 70 2 4 157 5 159 1.87e-52 175
Msa0928140 AT3G15510.1 52.147 163 63 3 9 156 21 183 1.90e-52 177
Msa0928140 AT4G35580.1 46.009 213 96 7 3 201 7 214 1.90e-52 180
Msa0928140 AT4G35580.3 46.009 213 96 7 3 201 7 214 3.01e-52 180
Msa0928140 AT4G35580.2 46.009 213 96 7 3 201 7 214 3.09e-52 180
Msa0928140 AT2G33480.2 53.333 150 67 1 5 154 15 161 9.87e-52 172
Msa0928140 AT5G46590.1 52.941 153 66 3 5 151 6 158 1.54e-51 172
Msa0928140 AT1G32770.1 48.485 165 70 2 2 151 13 177 3.94e-51 173
Msa0928140 AT3G10490.1 52.941 153 67 2 4 151 26 178 1.08e-50 168
Msa0928140 AT2G33480.1 52.632 152 67 2 5 154 15 163 1.47e-50 169
Msa0928140 AT5G46590.2 57.364 129 52 2 5 130 6 134 7.23e-50 167
Msa0928140 AT3G10480.1 54.248 153 65 2 4 151 26 178 8.14e-50 172
Msa0928140 AT3G10490.2 52.941 153 67 2 4 151 26 178 1.18e-49 171
Msa0928140 AT5G13180.1 50.641 156 71 3 5 157 14 166 1.32e-49 166
Msa0928140 AT4G17980.1 52.258 155 66 4 5 151 6 160 3.20e-49 165
Msa0928140 AT4G17980.2 52.258 155 66 4 5 151 6 160 5.44e-49 166
Msa0928140 AT3G10480.2 54.248 153 64 3 4 151 26 177 1.30e-48 169
Msa0928140 AT1G52880.1 52.795 161 62 3 9 155 21 181 2.37e-47 162
Msa0928140 AT1G26870.1 43.979 191 90 5 1 174 12 202 3.58e-47 164
Msa0928140 AT5G39820.1 42.632 190 82 4 7 169 22 211 5.22e-47 162
Msa0928140 AT2G02450.1 49.315 146 73 1 7 151 53 198 1.26e-46 162
Msa0928140 AT2G02450.2 49.315 146 73 1 7 151 53 198 1.31e-46 162
Msa0928140 AT2G43000.1 45.161 155 82 1 7 158 20 174 2.64e-46 158
Msa0928140 AT5G64060.1 46.711 152 77 2 4 151 5 156 1.24e-45 159
Msa0928140 AT1G34180.3 46.452 155 79 2 7 157 18 172 6.66e-45 159
Msa0928140 AT5G09330.5 49.007 151 73 2 5 151 6 156 7.38e-45 159
Msa0928140 AT5G09330.2 49.007 151 73 2 5 151 6 156 7.38e-45 159
Msa0928140 AT5G09330.4 49.007 151 73 2 5 151 6 156 7.38e-45 159
Msa0928140 AT5G09330.3 49.007 151 73 2 5 151 6 156 7.38e-45 159
Msa0928140 AT5G09330.1 49.007 151 73 2 5 151 6 156 7.38e-45 159
Msa0928140 AT1G34190.1 46.452 155 79 2 7 157 18 172 1.43e-44 160
Msa0928140 AT1G56010.1 64.078 103 32 1 54 151 2 104 2.24e-44 152
Msa0928140 AT3G10480.3 44.624 186 65 2 4 151 26 211 2.87e-44 159
Msa0928140 AT1G34180.1 46.452 155 79 2 7 157 18 172 3.34e-44 159
Msa0928140 AT5G24590.2 39.604 202 114 4 4 197 12 213 3.87e-44 157
Msa0928140 AT3G49530.2 38.605 215 111 5 3 212 11 209 1.99e-43 154
Msa0928140 AT3G49530.1 38.605 215 111 5 3 212 11 209 6.25e-43 154
Msa0928140 AT1G34180.4 43.114 167 79 2 7 157 18 184 1.03e-42 153
Msa0928140 AT2G17040.1 39.572 187 100 4 7 183 8 191 1.32e-42 148
Msa0928140 AT2G27300.1 48.276 145 69 2 5 148 14 153 2.44e-42 149
Msa0928140 AT1G32510.1 45.455 165 78 3 5 157 6 170 4.15e-42 147
Msa0928140 AT1G34180.2 44.311 167 77 3 7 157 18 184 4.40e-42 154
Msa0928140 AT3G12977.2 64.356 101 33 2 54 151 14 114 1.91e-41 144
Msa0928140 AT3G12910.1 43.529 170 76 5 7 157 23 191 8.09e-40 142
Msa0928140 AT1G32870.2 49.057 159 73 3 5 157 10 166 8.39e-40 146
Msa0928140 AT1G32870.1 49.057 159 73 3 5 157 10 166 1.06e-39 146
Msa0928140 AT1G32870.3 49.057 159 73 3 5 157 46 202 1.93e-39 146
Msa0928140 AT3G44290.2 42.767 159 80 3 7 159 16 169 2.88e-39 138
Msa0928140 AT5G22290.1 32.197 264 148 7 7 244 23 281 2.94e-39 141
Msa0928140 AT3G44290.1 42.767 159 80 3 7 159 16 169 9.88e-39 140
Msa0928140 AT4G10350.2 61.000 100 37 1 54 151 14 113 2.28e-36 132
Msa0928140 AT5G04395.1 45.517 145 63 2 2 130 25 169 3.10e-36 129
Msa0928140 AT4G28530.2 50.781 128 45 2 5 114 10 137 8.43e-33 124
Msa0928140 AT2G33480.3 55.556 99 42 1 58 154 8 106 8.57e-31 115
Msa0928140 AT1G02230.1 37.915 211 116 8 6 207 4 208 2.71e-29 115
Msa0928140 AT3G44350.2 37.576 165 94 5 1 156 1 165 2.17e-28 110
Msa0928140 AT3G04420.2 39.474 152 81 4 6 151 4 150 2.37e-28 111
Msa0928140 AT5G64530.1 34.884 172 82 4 4 157 2 161 2.46e-28 108
Msa0928140 AT3G04420.1 39.474 152 81 4 6 151 4 150 9.49e-28 110
Msa0928140 AT4G01520.1 39.873 158 85 6 6 156 5 159 2.99e-27 108
Msa0928140 AT5G64530.2 41.221 131 63 3 4 132 2 120 2.61e-26 102
Msa0928140 AT4G01540.4 36.612 183 103 7 8 183 7 183 3.03e-26 107
Msa0928140 AT4G01540.2 36.612 183 103 7 8 183 7 183 4.09e-26 107
Msa0928140 AT4G01540.3 36.612 183 103 7 8 183 7 183 4.74e-26 107
Msa0928140 AT4G01540.1 36.612 183 103 7 8 183 7 183 6.14e-26 107
Msa0928140 AT5G22380.1 36.527 167 95 5 1 156 1 167 8.54e-26 103
Msa0928140 AT3G44350.1 40.741 135 74 4 1 129 1 135 1.42e-25 100
Msa0928140 AT4G01550.1 38.667 150 83 5 8 151 7 153 4.14e-24 102
Msa0928140 AT3G10490.4 59.740 77 28 1 78 151 2 78 7.95e-24 100
Msa0928140 AT3G10490.3 59.740 77 28 1 78 151 2 78 7.95e-24 100
Msa0928140 AT2G18060.2 54.167 72 33 0 83 154 2 73 2.83e-23 97.4
Msa0928140 AT1G02220.1 40.945 127 68 3 6 128 4 127 5.97e-23 98.6
Msa0928140 AT1G02250.1 41.538 130 66 4 6 128 4 130 7.88e-23 97.8
Msa0928140 AT1G01010.1 38.037 163 76 8 1 148 1 153 3.74e-22 96.7
Msa0928140 AT5G14000.1 34.161 161 101 3 4 162 14 171 2.18e-20 87.8
Msa0928140 AT2G43000.2 40.625 96 54 1 66 158 1 96 5.06e-20 86.7
Msa0928140 AT5G14000.2 36.434 129 78 2 4 130 14 140 1.28e-18 81.6
Msa0928140 AT3G56530.1 30.405 148 100 2 5 149 52 199 1.22e-17 82.4
Msa0928140 AT5G50820.1 36.090 133 69 5 4 130 16 138 2.79e-17 79.0
Msa0928140 AT5G22290.2 40.230 87 43 2 84 165 2 84 1.41e-15 75.5
Msa0928140 AT3G55210.1 30.357 168 97 7 5 156 11 174 1.24e-14 73.6
Msa0928140 AT3G04430.1 35.878 131 70 5 11 128 6 135 1.47e-13 68.9
Msa0928140 AT5G14490.1 26.210 248 150 8 5 223 58 301 1.52e-13 70.9
Msa0928140 AT5G14490.4 26.210 248 150 8 5 223 55 298 1.66e-13 70.9
Msa0928140 AT5G14490.3 26.210 248 150 8 5 223 58 301 2.02e-13 70.5
Msa0928140 AT5G14490.2 29.282 181 104 6 5 168 55 228 3.75e-13 68.9
Msa0928140 AT4G29230.1 31.892 185 93 8 5 164 48 224 3.95e-13 70.1
Msa0928140 AT1G25580.1 32.544 169 90 8 5 160 58 215 4.00e-13 70.1
Msa0928140 AT4G29230.2 31.892 185 93 8 5 164 47 223 4.02e-13 70.1
Msa0928140 AT4G29230.3 31.892 185 93 8 5 164 48 224 5.05e-13 69.7
Msa0928140 AT1G28470.1 31.148 183 97 8 4 167 76 248 5.65e-13 68.9

Find 70 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 6_2:-73043438 None:intergenic
ACCTCAATAGTGAATGAATT+TGG 0.270479 6_2:+73043222 Msa0928140:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 6_2:+73042161 Msa0928140:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 6_2:-73043201 None:intergenic
GTTGAGCTTCCAAATCTAAA+TGG 0.329477 6_2:+73043249 Msa0928140:CDS
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 6_2:+73042279 Msa0928140:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 6_2:+73041173 Msa0928140:CDS
AGGATGAATGGGTGGTTTGT+AGG 0.337985 6_2:+73043124 Msa0928140:intron
ACATGAATTTGACAATGAAT+TGG 0.349230 6_2:+73043364 Msa0928140:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 6_2:-73043258 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 6_2:+73042214 Msa0928140:CDS
CGCTTGTCACTTGAGGGAAA+TGG 0.389057 6_2:+73044025 Msa0928140:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 6_2:-73043420 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 6_2:+73043125 Msa0928140:intron
ATCAACAACTGCAACAGCTT+TGG 0.405014 6_2:-73041141 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 6_2:-73043223 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 6_2:-73042162 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 6_2:+73042079 Msa0928140:intron
TTCTAAAAGCATTACAACTT+AGG 0.444682 6_2:+73043466 Msa0928140:CDS
TCCCTCAAGTGACAAGCGCC+AGG 0.447235 6_2:-73044020 None:intergenic
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 6_2:-73043537 None:intergenic
CCCTGGCGCTTGTCACTTGA+GGG 0.461099 6_2:+73044019 Msa0928140:CDS
CATACAGGTAAGGCTTCAAT+GGG 0.463734 6_2:+73042080 Msa0928140:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 6_2:+73042168 Msa0928140:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 6_2:+73042131 Msa0928140:CDS
ACCCTGGCGCTTGTCACTTG+AGG 0.474387 6_2:+73044018 Msa0928140:CDS
GCTTGTCACTTGAGGGAAAT+GGG 0.476439 6_2:+73044026 Msa0928140:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 6_2:-73043572 None:intergenic
TTAGATCAGTTCCAAGTTGG+TGG 0.487706 6_2:-73043569 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 6_2:+73042262 Msa0928140:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 6_2:-73041077 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 6_2:+73041163 Msa0928140:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 6_2:+73043297 Msa0928140:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 6_2:-73042253 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 6_2:+73042280 Msa0928140:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 6_2:+73042190 Msa0928140:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 6_2:+73042261 Msa0928140:CDS
GTAATATCTCACCACCAACT+TGG 0.532120 6_2:+73043558 Msa0928140:CDS
TCAGGGTATTGGAAAACCAC+TGG 0.536184 6_2:+73042179 Msa0928140:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 6_2:-73043210 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 6_2:-73042171 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 6_2:-73041132 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 6_2:+73041041 Msa0928140:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 6_2:+73042203 Msa0928140:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 6_2:-73043405 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 6_2:-73043304 None:intergenic
TTACCTTTGAAGTTCGAAAG+TGG 0.550555 6_2:-73042334 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 6_2:-73043177 None:intergenic
ACACCACTTTCGAACTTCAA+AGG 0.552288 6_2:+73042331 Msa0928140:CDS
TTGAGGGAAATGGGAAGTAG+TGG 0.557701 6_2:+73044035 Msa0928140:CDS
GTCACATGGAGATTCTGGTT+GGG 0.559177 6_2:-73043196 None:intergenic
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 6_2:-73042146 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 6_2:+73041162 Msa0928140:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 6_2:-73043387 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 6_2:-73041179 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 6_2:-73043197 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 6_2:-73042252 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 6_2:-73043414 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 6_2:+73043276 Msa0928140:CDS
CCCTCAAGTGACAAGCGCCA+GGG 0.606246 6_2:-73044019 None:intergenic
TGAGATATTACTCCTTGTTG+AGG 0.611365 6_2:-73043546 None:intergenic
CCAATCGAGCCACTGAATCA+GGG 0.616010 6_2:+73042162 Msa0928140:CDS
GCACCATACATGCCTCAACA+AGG 0.631430 6_2:+73043534 Msa0928140:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 6_2:+73042082 Msa0928140:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 6_2:+73043397 Msa0928140:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 6_2:+73042206 Msa0928140:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 6_2:-73041059 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 6_2:+73042263 Msa0928140:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 6_2:-73041056 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 6_2:+73042081 Msa0928140:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTATTTTTCTTTG+AGG + chr6_2:73041623-73041642 Msa0928140:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG - chr6_2:73042569-73042588 None:intergenic 10.0%
!!! GATGCAATTTTTTTTTTTTT+TGG + chr6_2:73041351-73041370 Msa0928140:intron 15.0%
!!! TTTTGGAAATTATTATTAGA+AGG + chr6_2:73041368-73041387 Msa0928140:intron 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG - chr6_2:73041828-73041847 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG + chr6_2:73041855-73041874 Msa0928140:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG - chr6_2:73042391-73042410 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG - chr6_2:73042392-73042411 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG + chr6_2:73042453-73042472 Msa0928140:intron 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG - chr6_2:73042556-73042575 None:intergenic 15.0%
!! AAACTATTTACTTATTAACA+AGG - chr6_2:73042942-73042961 None:intergenic 15.0%
!! GAATTTACTGAAATATTATT+TGG - chr6_2:73043441-73043460 None:intergenic 15.0%
!! ATATAGACAAATTAAGAGAA+AGG - chr6_2:73041510-73041529 None:intergenic 20.0%
!!! AGCTTTTGTATATATTGATT+TGG + chr6_2:73041657-73041676 Msa0928140:intron 20.0%
!!! GCTTTTGTATATATTGATTT+GGG + chr6_2:73041658-73041677 Msa0928140:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG - chr6_2:73041796-73041815 None:intergenic 20.0%
!!! CAACTCTTTAAAAAAATCAA+TGG + chr6_2:73041883-73041902 Msa0928140:intron 20.0%
!! TAACAAAAGTTGACATTAAT+TGG + chr6_2:73041919-73041938 Msa0928140:intron 20.0%
!! AATAATTAATCATGTTTGTG+TGG + chr6_2:73042048-73042067 Msa0928140:intron 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG + chr6_2:73042419-73042438 Msa0928140:intron 20.0%
!! AAAATACTAGATTTCATATG+TGG + chr6_2:73043073-73043092 Msa0928140:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG - chr6_2:73043261-73043280 None:intergenic 20.0%
!! NNNNNNNNNNATGTTAGTGG+AGG + chr6_2:73043743-73043762 Msa0928140:intron 20.0%
!!! TAATTCTTGAATACAGATTT+TGG + chr6_2:73043994-73044013 Msa0928140:intron 20.0%
! AGATATGAACAAAAATAACC+TGG - chr6_2:73041194-73041213 None:intergenic 25.0%
!! TGTTTGATTGTAGATTTTCA+AGG + chr6_2:73041295-73041314 Msa0928140:intron 25.0%
! TCGACTAAACTTAATTTAGA+AGG + chr6_2:73041329-73041348 Msa0928140:intron 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG - chr6_2:73041797-73041816 None:intergenic 25.0%
! AAAGATAAGGAAATATTTCG+TGG + chr6_2:73042203-73042222 Msa0928140:CDS 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG + chr6_2:73042248-73042267 Msa0928140:CDS 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG + chr6_2:73042456-73042475 Msa0928140:intron 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG - chr6_2:73042552-73042571 None:intergenic 25.0%
! AAAAAAGTTACGAGACTTTA+TGG + chr6_2:73042683-73042702 Msa0928140:intron 25.0%
!!! GAGTATTTTGATTACTATGT+TGG + chr6_2:73042853-73042872 Msa0928140:intron 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG + chr6_2:73043008-73043027 Msa0928140:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG + chr6_2:73043104-73043123 Msa0928140:intron 25.0%
! ACATGAATTTGACAATGAAT+TGG + chr6_2:73043364-73043383 Msa0928140:CDS 25.0%
!!! TTCTAAAAGCATTACAACTT+AGG + chr6_2:73043466-73043485 Msa0928140:CDS 25.0%
! TCAATAGAATAAGAATCGAA+AGG - chr6_2:73043871-73043890 None:intergenic 25.0%
! TTCGATTCTTATTCTATTGA+TGG + chr6_2:73043871-73043890 Msa0928140:intron 25.0%
! AACATAAAATTCATGCAGAT+AGG - chr6_2:73043908-73043927 None:intergenic 25.0%
ATGAACAAAAATAACCTGGA+AGG - chr6_2:73041190-73041209 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG + chr6_2:73041723-73041742 Msa0928140:intron 30.0%
! ACCAAGACTTTGTTGATTAT+TGG - chr6_2:73041727-73041746 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG - chr6_2:73041818-73041837 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG + chr6_2:73042070-73042089 Msa0928140:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG + chr6_2:73042131-73042150 Msa0928140:CDS 30.0%
! TATTTCCTTATCTTTTCCAG+TGG - chr6_2:73042198-73042217 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG + chr6_2:73042247-73042266 Msa0928140:CDS 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG + chr6_2:73042459-73042478 Msa0928140:intron 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG - chr6_2:73042545-73042564 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG - chr6_2:73042980-73042999 None:intergenic 30.0%
! TTTTTGTTGATACGCTCTTT+TGG - chr6_2:73043155-73043174 None:intergenic 30.0%
ACCTCAATAGTGAATGAATT+TGG + chr6_2:73043222-73043241 Msa0928140:CDS 30.0%
ACCAAATTCATTCACTATTG+AGG - chr6_2:73043226-73043245 None:intergenic 30.0%
ACAAATTCATCATCTTCATG+TGG + chr6_2:73043276-73043295 Msa0928140:CDS 30.0%
TGTTTGTCCTTGAATAATGT+TGG - chr6_2:73043307-73043326 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG - chr6_2:73043423-73043442 None:intergenic 30.0%
ATATTATGCGTTGTTCAAGA+AGG + chr6_2:73043817-73043836 Msa0928140:intron 30.0%
! GTAATCTCTGCTTTATTATG+AGG + chr6_2:73043845-73043864 Msa0928140:intron 30.0%
!! AAAATCTACCTCCTGGTTTT+AGG + chr6_2:73041048-73041067 Msa0928140:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG + chr6_2:73042065-73042084 Msa0928140:intron 35.0%
GAAAACCACTGGAAAAGATA+AGG + chr6_2:73042190-73042209 Msa0928140:CDS 35.0%
GATAAGGAAATATTTCGTGG+TGG + chr6_2:73042206-73042225 Msa0928140:CDS 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG + chr6_2:73042214-73042233 Msa0928140:CDS 35.0%
CCTACCCTTATAAAACACTA+GGG - chr6_2:73042255-73042274 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG + chr6_2:73042253-73042272 Msa0928140:CDS 35.0%
AAGGGGTGAGAAAAGTAATT+GGG + chr6_2:73042280-73042299 Msa0928140:CDS 35.0%
!! TTACCTTTGAAGTTCGAAAG+TGG - chr6_2:73042337-73042356 None:intergenic 35.0%
TTTAAGGATGGCTTATGGTT+GGG - chr6_2:73042540-73042559 None:intergenic 35.0%
!! TTTTAAGGATGGCTTATGGT+TGG - chr6_2:73042541-73042560 None:intergenic 35.0%
! TGTCTTGCATTTTCGAAAAC+GGG - chr6_2:73042979-73042998 None:intergenic 35.0%
! TGCAATTTTTGCAGGATGAA+TGG + chr6_2:73043112-73043131 Msa0928140:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG + chr6_2:73043113-73043132 Msa0928140:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG - chr6_2:73043180-73043199 None:intergenic 35.0%
GTTGAGCTTCCAAATCTAAA+TGG + chr6_2:73043249-73043268 Msa0928140:CDS 35.0%
GGATTCACCAACATTATTCA+AGG + chr6_2:73043297-73043316 Msa0928140:CDS 35.0%
TGAGATATTACTCCTTGTTG+AGG - chr6_2:73043549-73043568 None:intergenic 35.0%
TACTTAGATCAGTTCCAAGT+TGG - chr6_2:73043575-73043594 None:intergenic 35.0%
GTTGGATGAAACCTAAAACC+AGG - chr6_2:73041062-73041081 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG - chr6_2:73041080-73041099 None:intergenic 40.0%
ATCAACAACTGCAACAGCTT+TGG - chr6_2:73041144-73041163 None:intergenic 40.0%
ATCTCAACAAGTGTGAACCT+TGG + chr6_2:73041162-73041181 Msa0928140:CDS 40.0%
TCTCAACAAGTGTGAACCTT+GGG + chr6_2:73041163-73041182 Msa0928140:CDS 40.0%
TCATACAGGTAAGGCTTCAA+TGG + chr6_2:73042079-73042098 Msa0928140:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG + chr6_2:73042080-73042099 Msa0928140:intron 40.0%
ATACAGGTAAGGCTTCAATG+GGG + chr6_2:73042081-73042100 Msa0928140:intron 40.0%
TTTCCAATACCCTGATTCAG+TGG - chr6_2:73042174-73042193 None:intergenic 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG + chr6_2:73042252-73042271 Msa0928140:CDS 40.0%
CCCTACCCTTATAAAACACT+AGG - chr6_2:73042256-73042275 None:intergenic 40.0%
!! CAATTACTTTTCTCACCCCT+TGG - chr6_2:73042281-73042300 None:intergenic 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG + chr6_2:73042279-73042298 Msa0928140:CDS 40.0%
ACACCACTTTCGAACTTCAA+AGG + chr6_2:73042331-73042350 Msa0928140:CDS 40.0%
ATCACTAAATCAGACGCTAG+AGG + chr6_2:73042825-73042844 Msa0928140:intron 40.0%
! ATTTTTGCAGGATGAATGGG+TGG + chr6_2:73043116-73043135 Msa0928140:intron 40.0%
ACTATTGAGGTTGTGTCACA+TGG - chr6_2:73043213-73043232 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG - chr6_2:73043390-73043409 None:intergenic 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG - chr6_2:73043417-73043436 None:intergenic 40.0%
GTAATATCTCACCACCAACT+TGG + chr6_2:73043558-73043577 Msa0928140:CDS 40.0%
! TTAGATCAGTTCCAAGTTGG+TGG - chr6_2:73043572-73043591 None:intergenic 40.0%
ATGGAGGAAAATCTACCTCC+TGG + chr6_2:73041041-73041060 Msa0928140:CDS 45.0%
GGATGAAACCTAAAACCAGG+AGG - chr6_2:73041059-73041078 None:intergenic 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG - chr6_2:73041135-73041154 None:intergenic 45.0%
AAATAACCTGGAAGGTCCCA+AGG - chr6_2:73041182-73041201 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG + chr6_2:73042082-73042101 Msa0928140:intron 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG - chr6_2:73042149-73042168 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG + chr6_2:73042179-73042198 Msa0928140:CDS 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG + chr6_2:73042218-73042237 Msa0928140:CDS 45.0%
TTTATAAGGGTAGGGCTCCA+AGG + chr6_2:73042261-73042280 Msa0928140:CDS 45.0%
TTATAAGGGTAGGGCTCCAA+GGG + chr6_2:73042262-73042281 Msa0928140:CDS 45.0%
GATGGCTTATGGTTGGGTAA+AGG - chr6_2:73042534-73042553 None:intergenic 45.0%
! AGGATGAATGGGTGGTTTGT+AGG + chr6_2:73043124-73043143 Msa0928140:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG + chr6_2:73043125-73043144 Msa0928140:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG - chr6_2:73043199-73043218 None:intergenic 45.0%
TGTCACATGGAGATTCTGGT+TGG - chr6_2:73043200-73043219 None:intergenic 45.0%
GTTGTGTCACATGGAGATTC+TGG - chr6_2:73043204-73043223 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG + chr6_2:73043397-73043416 Msa0928140:CDS 45.0%
TTAGAAGGCCATGGTAGAGA+TGG - chr6_2:73043408-73043427 None:intergenic 45.0%
ACTCCTTGTTGAGGCATGTA+TGG - chr6_2:73043540-73043559 None:intergenic 45.0%
!! GAATACAGATTTTGGCACCC+TGG + chr6_2:73044002-73044021 Msa0928140:intron 45.0%
! GCTTGTCACTTGAGGGAAAT+GGG + chr6_2:73044026-73044045 Msa0928140:CDS 45.0%
!! ATATATATATAACAAAAAAA+GGG - chr6_2:73041235-73041254 None:intergenic 5.0%
!! TATATATATATAACAAAAAA+AGG - chr6_2:73041236-73041255 None:intergenic 5.0%
!!! AATATTATTAATTACTTTTT+TGG + chr6_2:73041466-73041485 Msa0928140:intron 5.0%
!! TTTATATATAAGTTATTAAT+TGG - chr6_2:73041577-73041596 None:intergenic 5.0%
!!! TATATATAAGTTTTTTTTTT+GGG - chr6_2:73041605-73041624 None:intergenic 5.0%
!!! TTATATATAAGTTTTTTTTT+TGG - chr6_2:73041606-73041625 None:intergenic 5.0%
!! AAAACTATAAAAATTAATTA+TGG - chr6_2:73042614-73042633 None:intergenic 5.0%
!!! TAACATTATTTTTTTTAAAA+TGG + chr6_2:73043044-73043063 Msa0928140:intron 5.0%
TAAGGCTTCAATGGGGGAGA+AGG + chr6_2:73042088-73042107 Msa0928140:CDS 50.0%
CTTCAATGGGGGAGAAGGAA+TGG + chr6_2:73042093-73042112 Msa0928140:CDS 50.0%
ACCAATCGAGCCACTGAATC+AGG + chr6_2:73042161-73042180 Msa0928140:CDS 50.0%
CCAATCGAGCCACTGAATCA+GGG + chr6_2:73042162-73042181 Msa0928140:CDS 50.0%
GAGCCACTGAATCAGGGTAT+TGG + chr6_2:73042168-73042187 Msa0928140:CDS 50.0%
TATAAGGGTAGGGCTCCAAG+GGG + chr6_2:73042263-73042282 Msa0928140:CDS 50.0%
GCACCATACATGCCTCAACA+AGG + chr6_2:73043534-73043553 Msa0928140:CDS 50.0%
! CGCTTGTCACTTGAGGGAAA+TGG + chr6_2:73044025-73044044 Msa0928140:CDS 50.0%
TGTGAACCTTGGGACCTTCC+AGG + chr6_2:73041173-73041192 Msa0928140:CDS 55.0%
CCCTGATTCAGTGGCTCGAT+TGG - chr6_2:73042165-73042184 None:intergenic 55.0%
ACCACGCTCTCTCAAGGCTA+GGG - chr6_2:73043780-73043799 None:intergenic 55.0%
TCTACCACCACGCTCTCTCA+AGG - chr6_2:73043786-73043805 None:intergenic 55.0%
!! TCCCTAGCCTTGAGAGAGCG+TGG + chr6_2:73043776-73043795 Msa0928140:intron 60.0%
CACCACGCTCTCTCAAGGCT+AGG - chr6_2:73043781-73043800 None:intergenic 60.0%
!! CTAGCCTTGAGAGAGCGTGG+TGG + chr6_2:73043779-73043798 Msa0928140:intron 60.0%
! ACCCTGGCGCTTGTCACTTG+AGG + chr6_2:73044018-73044037 Msa0928140:CDS 60.0%
CCCTCAAGTGACAAGCGCCA+GGG - chr6_2:73044022-73044041 None:intergenic 60.0%
! CCCTGGCGCTTGTCACTTGA+GGG + chr6_2:73044019-73044038 Msa0928140:CDS 60.0%
TCCCTCAAGTGACAAGCGCC+AGG - chr6_2:73044023-73044042 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 73041041 73044054 73041041 ID=Msa0928140;Name=Msa0928140
chr6_2 mRNA 73041041 73044054 73041041 ID=Msa0928140-mRNA-1;Parent=Msa0928140;Name=Msa0928140-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0.33|0|0.75|1|1|4|0|322
chr6_2 exon 73041041 73041194 73041041 ID=Msa0928140-mRNA-1:exon:12395;Parent=Msa0928140-mRNA-1
chr6_2 exon 73042087 73042352 73042087 ID=Msa0928140-mRNA-1:exon:12396;Parent=Msa0928140-mRNA-1
chr6_2 exon 73043126 73043629 73043126 ID=Msa0928140-mRNA-1:exon:12397;Parent=Msa0928140-mRNA-1
chr6_2 exon 73044010 73044054 73044010 ID=Msa0928140-mRNA-1:exon:12398;Parent=Msa0928140-mRNA-1
chr6_2 CDS 73041041 73041194 73041041 ID=Msa0928140-mRNA-1:cds;Parent=Msa0928140-mRNA-1
chr6_2 CDS 73042087 73042352 73042087 ID=Msa0928140-mRNA-1:cds;Parent=Msa0928140-mRNA-1
chr6_2 CDS 73043126 73043629 73043126 ID=Msa0928140-mRNA-1:cds;Parent=Msa0928140-mRNA-1
chr6_2 CDS 73044010 73044054 73044010 ID=Msa0928140-mRNA-1:cds;Parent=Msa0928140-mRNA-1
Gene Sequence

>Msa0928140

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATACTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAACTTCAAAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCGTATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACATCAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCACCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAATTTTGGCACCCTGGCGCTTGTCACTTGAGGGAAATGGGAAGTAG
Protein sequence

>Msa0928140

MEENLPPGFRFHPTDEELITHYLTMKISDTSFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSVSTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQHQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKILAPWRLSLEGNGK*