Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928190 | KEH26454.1 | 82.116 | 671 | 94 | 7 | 1 | 655 | 1 | 661 | 0.0 | 1081 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928190 | sp|O24606|EIN3_ARATH | 39.960 | 498 | 239 | 12 | 31 | 483 | 37 | 519 | 2.04e-103 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0928190 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928190 | MtrunA17_Chr6g0476301 | 83.287 | 359 | 42 | 4 | 91 | 438 | 1 | 352 | 0.0 | 597 |
| Msa0928190 | MtrunA17_Chr6g0473191 | 84.122 | 296 | 37 | 2 | 91 | 376 | 1 | 296 | 1.94e-175 | 501 |
| Msa0928190 | MtrunA17_Chr6g0476291 | 85.926 | 270 | 37 | 1 | 91 | 359 | 1 | 270 | 5.98e-165 | 473 |
| Msa0928190 | MtrunA17_Chr3g0080401 | 50.138 | 363 | 140 | 8 | 91 | 440 | 1 | 335 | 1.52e-109 | 334 |
| Msa0928190 | MtrunA17_Chr3g0118361 | 55.517 | 290 | 114 | 5 | 42 | 323 | 51 | 333 | 4.52e-109 | 343 |
| Msa0928190 | MtrunA17_Chr5g0440591 | 50.779 | 321 | 147 | 4 | 4 | 318 | 14 | 329 | 1.99e-107 | 338 |
| Msa0928190 | MtrunA17_Chr2g0329151 | 53.184 | 267 | 114 | 3 | 32 | 290 | 27 | 290 | 1.03e-94 | 305 |
| Msa0928190 | MtrunA17_Chr3g0124291 | 51.550 | 258 | 103 | 6 | 43 | 287 | 32 | 280 | 4.73e-84 | 271 |
| Msa0928190 | MtrunA17_Chr8g0382561 | 47.566 | 267 | 131 | 5 | 29 | 287 | 6 | 271 | 3.64e-76 | 251 |
| Msa0928190 | MtrunA17_Chr7g0260281 | 49.231 | 65 | 33 | 0 | 80 | 144 | 1 | 65 | 9.18e-17 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928190 | AT3G20770.1 | 39.960 | 498 | 239 | 12 | 31 | 483 | 37 | 519 | 2.08e-104 | 331 |
| Msa0928190 | AT2G27050.1 | 40.085 | 469 | 217 | 8 | 39 | 462 | 45 | 494 | 2.41e-104 | 329 |
| Msa0928190 | AT1G73730.2 | 51.493 | 268 | 117 | 3 | 31 | 290 | 14 | 276 | 3.00e-90 | 291 |
| Msa0928190 | AT1G73730.1 | 51.493 | 268 | 117 | 3 | 31 | 290 | 26 | 288 | 3.10e-90 | 292 |
| Msa0928190 | AT5G10120.1 | 49.618 | 262 | 124 | 3 | 34 | 287 | 14 | 275 | 1.63e-85 | 276 |
| Msa0928190 | AT5G65100.1 | 45.357 | 280 | 123 | 4 | 38 | 291 | 33 | 308 | 5.25e-78 | 259 |
| Msa0928190 | AT5G21120.2 | 47.082 | 257 | 121 | 3 | 48 | 291 | 60 | 314 | 4.14e-73 | 245 |
| Msa0928190 | AT5G21120.3 | 47.082 | 257 | 121 | 3 | 48 | 291 | 53 | 307 | 6.31e-73 | 244 |
| Msa0928190 | AT5G21120.1 | 47.082 | 257 | 121 | 3 | 48 | 291 | 53 | 307 | 6.31e-73 | 244 |
Find 123 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATGGTTGTTTCCTTAA+TGG | 0.114788 | 6_2:-73201020 | None:intergenic |
| CAAATCCAACCATTTGAAAT+TGG | 0.189682 | 6_2:-73201411 | None:intergenic |
| TTCAGTAAATCAAATGTAAT+TGG | 0.211918 | 6_2:-73200692 | None:intergenic |
| TTCTCACATCTCTCTCTTGC+TGG | 0.240527 | 6_2:-73201324 | None:intergenic |
| CGGAGATTTCCATTGGAAAA+AGG | 0.266811 | 6_2:+73200782 | Msa0928190:CDS |
| ACAAGATAAACTCACCATTA+AGG | 0.283993 | 6_2:+73201006 | Msa0928190:CDS |
| CCATTTGAGGCTGCATGTTT+TGG | 0.297794 | 6_2:-73202753 | None:intergenic |
| CTTTGATTGACACCGTGATT+TGG | 0.301125 | 6_2:-73202517 | None:intergenic |
| ATTAATTATTGATTCCCTTT+TGG | 0.303897 | 6_2:-73202996 | None:intergenic |
| CTTGTTGACCATAGAAATTT+TGG | 0.306348 | 6_2:-73202777 | None:intergenic |
| CTTGTTCTGTTGAACACTTC+CGG | 0.312860 | 6_2:-73202560 | None:intergenic |
| TTGATGGACGTATATAATTC+AGG | 0.326235 | 6_2:+73202367 | Msa0928190:CDS |
| ATGAACATGGTTTCAACTTC+CGG | 0.329437 | 6_2:+73202724 | Msa0928190:CDS |
| AATCAGATCATTCATCATTC+AGG | 0.348145 | 6_2:+73201502 | Msa0928190:CDS |
| GGTTTGGAAGGTTTATGTTT+TGG | 0.353709 | 6_2:+73200913 | Msa0928190:CDS |
| TTTGAAGCTTCTCCCCTTGA+AGG | 0.355072 | 6_2:-73199666 | None:intergenic |
| GATGCTCGTGGCTTCATCTA+TGG | 0.357885 | 6_2:+73200506 | Msa0928190:CDS |
| TTCCTAATCTTATGAACATT+AGG | 0.362413 | 6_2:-73200959 | None:intergenic |
| TTTGCTTGCATTGGAACATT+AGG | 0.363761 | 6_2:-73202832 | None:intergenic |
| ATGCATCCCAATGTTTATAA+TGG | 0.369089 | 6_2:+73199630 | Msa0928190:CDS |
| GCGGCACTAATGATGATAGA+AGG | 0.375221 | 6_2:-73200742 | None:intergenic |
| AACAACCAATTTCAAATGGT+TGG | 0.377578 | 6_2:+73201406 | Msa0928190:CDS |
| AACAATGCAAAACAAGATAA+AGG | 0.381513 | 6_2:+73199687 | Msa0928190:CDS |
| GTTGAAACCATGTTCATAAC+TGG | 0.381589 | 6_2:-73202718 | None:intergenic |
| TGATAGAAGGGAACTTAATA+TGG | 0.382620 | 6_2:-73200729 | None:intergenic |
| GTGCACAAGAGCGTGTATTA+AGG | 0.383295 | 6_2:+73199874 | Msa0928190:CDS |
| CTCCCGGTGTTAATCATAAC+AGG | 0.403210 | 6_2:+73202434 | Msa0928190:CDS |
| CAAATGGACCAAAATTTCTA+TGG | 0.408363 | 6_2:+73202769 | Msa0928190:CDS |
| CCAAAACATGCAGCCTCAAA+TGG | 0.412132 | 6_2:+73202753 | Msa0928190:CDS |
| GAACACTTGCATGGTAGATT+TGG | 0.424776 | 6_2:-73202462 | None:intergenic |
| CGCCATGATTCTTTCCCTGT+GGG | 0.425179 | 6_2:-73200824 | None:intergenic |
| GTGCTATCGCTAACCCTTCA+AGG | 0.426255 | 6_2:+73199652 | Msa0928190:CDS |
| TTGATAATTTGTTGTTGTAA+TGG | 0.429080 | 6_2:-73200654 | None:intergenic |
| TTTCTCAACGTTCGACCAAA+AGG | 0.429941 | 6_2:+73202981 | Msa0928190:CDS |
| CGACAACAACCAATTTCAAA+TGG | 0.432725 | 6_2:+73201402 | Msa0928190:CDS |
| CTCATGATCTGAAGAAGGTT+TGG | 0.440824 | 6_2:+73200897 | Msa0928190:CDS |
| CAGGTACATGTTAAAGATGA+TGG | 0.441014 | 6_2:+73200475 | Msa0928190:intron |
| CCATTAAGGAAACAACCATT+TGG | 0.457496 | 6_2:+73201020 | Msa0928190:CDS |
| AACAAGAGAAAACGTGAACT+TGG | 0.466849 | 6_2:+73201253 | Msa0928190:CDS |
| GTTGAGGTATTTGCTTGCAT+TGG | 0.470104 | 6_2:-73202841 | None:intergenic |
| CTCCTAATGTTCATAAGATT+AGG | 0.475251 | 6_2:+73200957 | Msa0928190:CDS |
| GAACACCATCATGAGTACTA+TGG | 0.478356 | 6_2:+73202582 | Msa0928190:CDS |
| CATCAGAAAATTTACGAGGC+TGG | 0.485103 | 6_2:+73200564 | Msa0928190:CDS |
| AAGAGACAATACTACAACAT+TGG | 0.489191 | 6_2:+73199824 | Msa0928190:CDS |
| AGGGAACTTAATATGGTGTC+AGG | 0.489265 | 6_2:-73200722 | None:intergenic |
| ACGTGTGCAAGCTGCGGTAC+CGG | 0.490700 | 6_2:+73201474 | Msa0928190:CDS |
| CCTCCACCATGGTGGCCCAC+AGG | 0.492707 | 6_2:+73200809 | Msa0928190:CDS |
| CCTGTGGGCCACCATGGTGG+AGG | 0.495237 | 6_2:-73200809 | None:intergenic |
| ATTAATAATAGCAAACCAAA+TGG | 0.502082 | 6_2:-73201035 | None:intergenic |
| ATAGCACCATTATAAACATT+GGG | 0.502724 | 6_2:-73199636 | None:intergenic |
| CAAAATTTCTATGGTCAACA+AGG | 0.508752 | 6_2:+73202778 | Msa0928190:CDS |
| GGCCCACAGGGAAAGAATCA+TGG | 0.510965 | 6_2:+73200822 | Msa0928190:CDS |
| AATGGAAATCTCCGTTGTGG+TGG | 0.514931 | 6_2:-73200773 | None:intergenic |
| TTGAAGCTTCTCCCCTTGAA+GGG | 0.515863 | 6_2:-73199665 | None:intergenic |
| TTCTCAACGTTCGACCAAAA+GGG | 0.517578 | 6_2:+73202982 | Msa0928190:CDS |
| ACCACAACGGAGATTTCCAT+TGG | 0.522988 | 6_2:+73200775 | Msa0928190:CDS |
| TTATGATTAACACCGGGAGT+TGG | 0.524753 | 6_2:-73202430 | None:intergenic |
| TGAATCAAAGGTTGTTGTTG+AGG | 0.525190 | 6_2:-73202857 | None:intergenic |
| CTACCATGCAAGTGTTCGAC+AGG | 0.526442 | 6_2:+73202468 | Msa0928190:CDS |
| CAAACCTTCTTCAGATCATG+AGG | 0.527892 | 6_2:-73200896 | None:intergenic |
| GATAGCACCATTATAAACAT+TGG | 0.531143 | 6_2:-73199637 | None:intergenic |
| CCGCCATGATTCTTTCCCTG+TGG | 0.535687 | 6_2:-73200825 | None:intergenic |
| TGATCTGAAGAAGGTTTGGA+AGG | 0.544263 | 6_2:+73200901 | Msa0928190:CDS |
| CTCCACCATGGTGGCCCACA+GGG | 0.544663 | 6_2:+73200810 | Msa0928190:CDS |
| TCTTTCCCTGTGGGCCACCA+TGG | 0.545594 | 6_2:-73200815 | None:intergenic |
| CTCATTGGTTTGCCCTCGTG+AGG | 0.546764 | 6_2:-73200536 | None:intergenic |
| TTCCCTGTGGGCCACCATGG+TGG | 0.547127 | 6_2:-73200812 | None:intergenic |
| TCATATTTAGCAATTGCCGC+TGG | 0.547452 | 6_2:-73200620 | None:intergenic |
| ATGAGATTTAGAGAAGATCC+TGG | 0.550822 | 6_2:+73200854 | Msa0928190:CDS |
| CACTTGCATGGTAGATTTGG+TGG | 0.551431 | 6_2:-73202459 | None:intergenic |
| CAGAAAATTTACGAGGCTGG+TGG | 0.554585 | 6_2:+73200567 | Msa0928190:CDS |
| ATGATCAAAAGATGAATCAA+AGG | 0.559551 | 6_2:-73202869 | None:intergenic |
| TCTCCTGTCGAACACTTGCA+TGG | 0.559778 | 6_2:-73202471 | None:intergenic |
| TCATCGTCATCGTCATATGA+AGG | 0.559894 | 6_2:+73201226 | Msa0928190:CDS |
| GCTTGCACACGTTGGTCAAG+AGG | 0.560353 | 6_2:-73201463 | None:intergenic |
| TGAATGATCTGATTTGCAAC+CGG | 0.563371 | 6_2:-73201493 | None:intergenic |
| AAAGCCTCATGATCTGAAGA+AGG | 0.566749 | 6_2:+73200892 | Msa0928190:CDS |
| TCCAATGGAAATCTCCGTTG+TGG | 0.567968 | 6_2:-73200776 | None:intergenic |
| CATCATTGAACTATTCATCA+TGG | 0.573478 | 6_2:-73202683 | None:intergenic |
| TGCTATCGCTAACCCTTCAA+GGG | 0.574060 | 6_2:+73199653 | Msa0928190:CDS |
| AAGTAATTATGTGCTTGTTG+AGG | 0.574583 | 6_2:+73201126 | Msa0928190:CDS |
| AACAATGCAGGTAATTACTC+AGG | 0.576216 | 6_2:+73202322 | Msa0928190:intron |
| ACAAATTATCAAAAGTCGAA+TGG | 0.579574 | 6_2:+73200665 | Msa0928190:CDS |
| TTCAATGCCAGTTATGAACA+TGG | 0.587129 | 6_2:+73202711 | Msa0928190:CDS |
| ATACTACAACATTGGAACAA+AGG | 0.588265 | 6_2:+73199832 | Msa0928190:CDS |
| CGGCACTAATGATGATAGAA+GGG | 0.589144 | 6_2:-73200741 | None:intergenic |
| GCAGGTAATTACTCAGGAGG+AGG | 0.589511 | 6_2:+73202328 | Msa0928190:intron |
| ATTTATTGACTCTCCTACTG+TGG | 0.596370 | 6_2:+73202942 | Msa0928190:CDS |
| ATGGAAATCTCCGTTGTGGT+GGG | 0.597513 | 6_2:-73200772 | None:intergenic |
| CTATGGAGTAATACCTCACG+AGG | 0.599594 | 6_2:+73200523 | Msa0928190:CDS |
| ACAAAGGAAAAGAAAGACAA+TGG | 0.610942 | 6_2:+73199848 | Msa0928190:CDS |
| GCTAACTATTGAGGAACTAG+AGG | 0.611138 | 6_2:+73199746 | Msa0928190:CDS |
| TGCAAAACAAGATAAAGGAA+AGG | 0.611308 | 6_2:+73199692 | Msa0928190:CDS |
| TAACTTGATGATGCCACAGT+AGG | 0.612606 | 6_2:-73202955 | None:intergenic |
| GTGCCTGTTATGATTAACAC+CGG | 0.614560 | 6_2:-73202437 | None:intergenic |
| AGTACGATGATTCCAACTCC+CGG | 0.614991 | 6_2:+73202418 | Msa0928190:CDS |
| GGCAATTGCTAAATATGAAG+CGG | 0.618376 | 6_2:+73200625 | Msa0928190:CDS |
| TTACTCAGGAGGAGGAGAAG+TGG | 0.624741 | 6_2:+73202336 | Msa0928190:CDS |
| AAAATTTCTATGGTCAACAA+GGG | 0.632348 | 6_2:+73202779 | Msa0928190:CDS |
| AAATTTCTATGGTCAACAAG+GGG | 0.633963 | 6_2:+73202780 | Msa0928190:CDS |
| TATGACGATGACGATGATGA+TGG | 0.634409 | 6_2:-73201220 | None:intergenic |
| TGGAACCATAGTACTCATGA+TGG | 0.638379 | 6_2:-73202587 | None:intergenic |
| GGAACATAGTCAGACAGTCA+AGG | 0.641121 | 6_2:+73200978 | Msa0928190:CDS |
| TGGAATTCATGTTGATCAAG+AGG | 0.645230 | 6_2:-73201304 | None:intergenic |
| TGGAATCATCGTACTCATGA+CGG | 0.645856 | 6_2:-73202410 | None:intergenic |
| CGTTGTGGTGGGTCGCAATG+CGG | 0.647311 | 6_2:-73200761 | None:intergenic |
| AGTACTATGATTCCAAATCA+CGG | 0.648005 | 6_2:+73202505 | Msa0928190:CDS |
| CGCATTGCGACCCACCACAA+CGG | 0.648689 | 6_2:+73200762 | Msa0928190:CDS |
| ATGGAAGTTTGTGATGCTCG+TGG | 0.649462 | 6_2:+73200494 | Msa0928190:CDS |
| AATGCAGGTAATTACTCAGG+AGG | 0.654047 | 6_2:+73202325 | Msa0928190:intron |
| TGACCAACGTGTGCAAGCTG+CGG | 0.662625 | 6_2:+73201468 | Msa0928190:CDS |
| ATGCATCGTCAAATCTACAC+CGG | 0.672329 | 6_2:+73202541 | Msa0928190:CDS |
| CACGAGGGCAAACCAATGAG+TGG | 0.675933 | 6_2:+73200539 | Msa0928190:CDS |
| TGCCTGTTATGATTAACACC+GGG | 0.685262 | 6_2:-73202436 | None:intergenic |
| AATTTCTATGGTCAACAAGG+GGG | 0.688284 | 6_2:+73202781 | Msa0928190:CDS |
| GCTATCGCTAACCCTTCAAG+GGG | 0.702578 | 6_2:+73199654 | Msa0928190:CDS |
| AAGGCATTCCTCCACCATGG+TGG | 0.706316 | 6_2:+73200801 | Msa0928190:CDS |
| ACACTTGAAGTGTAGACTTG+AGG | 0.709845 | 6_2:-73202637 | None:intergenic |
| CAAGTGTTCATGAACAACAG+AGG | 0.720196 | 6_2:+73202653 | Msa0928190:CDS |
| GGTTCATCAGAAAATTTACG+AGG | 0.727192 | 6_2:+73200560 | Msa0928190:CDS |
| GTACCGCAGCTTGCACACGT+TGG | 0.738322 | 6_2:-73201471 | None:intergenic |
| CCACAGGGAAAGAATCATGG+CGG | 0.756841 | 6_2:+73200825 | Msa0928190:CDS |
| TATGGAGTAATACCTCACGA+GGG | 0.784582 | 6_2:+73200524 | Msa0928190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGGTATTTTTATTTAAAT+AGG | + | chr6_2:73201692-73201711 | Msa0928190:intron | 10.0% |
| !!! | ATTTTATTTTTCTATGTATT+TGG | + | chr6_2:73202251-73202270 | Msa0928190:intron | 10.0% |
| !! | AACTAGGATATATAAAAATT+AGG | + | chr6_2:73199918-73199937 | Msa0928190:intron | 15.0% |
| !!! | TAAATGATATATTAGCTTAT+AGG | + | chr6_2:73201641-73201660 | Msa0928190:intron | 15.0% |
| !! | CTACTTCATTATATATTATT+TGG | + | chr6_2:73201986-73202005 | Msa0928190:intron | 15.0% |
| !!! | TTTTGTAGTTTTTTTCTTAG+GGG | - | chr6_2:73199992-73200011 | None:intergenic | 20.0% |
| !!! | GTTTTGTAGTTTTTTTCTTA+GGG | - | chr6_2:73199993-73200012 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTGCCTTG+GGG | - | chr6_2:73200052-73200071 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTTTTGCCTT+GGG | - | chr6_2:73200053-73200072 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTTTTTTTGCCT+TGG | - | chr6_2:73200054-73200073 | None:intergenic | 20.0% |
| !!! | TTTTGTAGTTTTTTTTCTCA+GGG | + | chr6_2:73200169-73200188 | Msa0928190:intron | 20.0% |
| !!! | GTAAAGTTCTCAAAATTTTA+TGG | - | chr6_2:73200408-73200427 | None:intergenic | 20.0% |
| !! | ATAGTTAAATTCGACAAAAA+CGG | + | chr6_2:73200596-73200615 | Msa0928190:CDS | 20.0% |
| !!! | TTGATAATTTGTTGTTGTAA+TGG | - | chr6_2:73200657-73200676 | None:intergenic | 20.0% |
| !! | TTCAGTAAATCAAATGTAAT+TGG | - | chr6_2:73200695-73200714 | None:intergenic | 20.0% |
| !! | ATTAATAATAGCAAACCAAA+TGG | - | chr6_2:73201038-73201057 | None:intergenic | 20.0% |
| !! | ATAGGAAAATGTTAGATTAT+AGG | + | chr6_2:73201710-73201729 | Msa0928190:intron | 20.0% |
| !! | TCTTAACTATTATGAATTGT+AGG | - | chr6_2:73201824-73201843 | None:intergenic | 20.0% |
| ! | ATAGCACCATTATAAACATT+GGG | - | chr6_2:73199639-73199658 | None:intergenic | 25.0% |
| ! | AACAATGCAAAACAAGATAA+AGG | + | chr6_2:73199687-73199706 | Msa0928190:CDS | 25.0% |
| !!! | GGTTTTGTAGTTTTTTTCTT+AGG | - | chr6_2:73199994-73200013 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTGCCTTGG+GGG | - | chr6_2:73200051-73200070 | None:intergenic | 25.0% |
| !!! | GTTTTGTAGTTTTTTTTCTC+AGG | + | chr6_2:73200168-73200187 | Msa0928190:intron | 25.0% |
| !!! | TTTGTAGTTTTTTTTCTCAG+GGG | + | chr6_2:73200170-73200189 | Msa0928190:intron | 25.0% |
| ! | TAATATCACAAGTTAACTCA+TGG | + | chr6_2:73200370-73200389 | Msa0928190:intron | 25.0% |
| ! | ACAAATTATCAAAAGTCGAA+TGG | + | chr6_2:73200665-73200684 | Msa0928190:CDS | 25.0% |
| ! | TTCCTAATCTTATGAACATT+AGG | - | chr6_2:73200962-73200981 | None:intergenic | 25.0% |
| ! | TCAAAACTTGAGAAAAATTC+AGG | - | chr6_2:73201091-73201110 | None:intergenic | 25.0% |
| ! | TAAACAAATGAATAAGTGTG+TGG | - | chr6_2:73201551-73201570 | None:intergenic | 25.0% |
| ! | GATTCAAGTCATAAATCAAA+TGG | - | chr6_2:73201600-73201619 | None:intergenic | 25.0% |
| ! | TGCTTGTTTCAAACTTAAAA+AGG | + | chr6_2:73201674-73201693 | Msa0928190:intron | 25.0% |
| !! | TAGATTATAGGTCTCAATTT+TGG | + | chr6_2:73201722-73201741 | Msa0928190:intron | 25.0% |
| ! | CTTATATGAAGCTAACATTA+TGG | - | chr6_2:73201793-73201812 | None:intergenic | 25.0% |
| !! | TCACAATTTGTTTATGAATC+TGG | + | chr6_2:73201878-73201897 | Msa0928190:intron | 25.0% |
| !! | CACAATTTGTTTATGAATCT+GGG | + | chr6_2:73201879-73201898 | Msa0928190:intron | 25.0% |
| !! | ACAATTTGTTTATGAATCTG+GGG | + | chr6_2:73201880-73201899 | Msa0928190:intron | 25.0% |
| !!! | CCAGAATTATTTTTCTTTTG+GGG | - | chr6_2:73201940-73201959 | None:intergenic | 25.0% |
| !!! | GCCAGAATTATTTTTCTTTT+GGG | - | chr6_2:73201941-73201960 | None:intergenic | 25.0% |
| !!! | TGCCAGAATTATTTTTCTTT+TGG | - | chr6_2:73201942-73201961 | None:intergenic | 25.0% |
| ! | AAAATTTCTATGGTCAACAA+GGG | + | chr6_2:73202779-73202798 | Msa0928190:CDS | 25.0% |
| ! | ATGATCAAAAGATGAATCAA+AGG | - | chr6_2:73202872-73202891 | None:intergenic | 25.0% |
| ATGCATCCCAATGTTTATAA+TGG | + | chr6_2:73199630-73199649 | Msa0928190:CDS | 30.0% | |
| GATAGCACCATTATAAACAT+TGG | - | chr6_2:73199640-73199659 | None:intergenic | 30.0% | |
| TGCAAAACAAGATAAAGGAA+AGG | + | chr6_2:73199692-73199711 | Msa0928190:CDS | 30.0% | |
| AAGGAAAAAGTAGAAGAAGA+TGG | + | chr6_2:73199711-73199730 | Msa0928190:CDS | 30.0% | |
| GAAAAAAGAGCTAACTATTG+AGG | + | chr6_2:73199737-73199756 | Msa0928190:CDS | 30.0% | |
| AATGCTGCTAAAAAAGATGA+AGG | + | chr6_2:73199788-73199807 | Msa0928190:CDS | 30.0% | |
| AAGAGACAATACTACAACAT+TGG | + | chr6_2:73199824-73199843 | Msa0928190:CDS | 30.0% | |
| ATACTACAACATTGGAACAA+AGG | + | chr6_2:73199832-73199851 | Msa0928190:CDS | 30.0% | |
| ACAAAGGAAAAGAAAGACAA+TGG | + | chr6_2:73199848-73199867 | Msa0928190:CDS | 30.0% | |
| !!! | TTTTTTTTTTTTGCCTTGGG+GGG | - | chr6_2:73200050-73200069 | None:intergenic | 30.0% |
| !!! | TTGTAGTTTTTTTTCTCAGG+GGG | + | chr6_2:73200171-73200190 | Msa0928190:intron | 30.0% |
| !! | TTTTGAGAACTTTACCTTTG+AGG | + | chr6_2:73200413-73200432 | Msa0928190:intron | 30.0% |
| TGATAGAAGGGAACTTAATA+TGG | - | chr6_2:73200732-73200751 | None:intergenic | 30.0% | |
| ! | ATCATGAGGCTTTTTATAAG+GGG | - | chr6_2:73200885-73200904 | None:intergenic | 30.0% |
| ! | GATCATGAGGCTTTTTATAA+GGG | - | chr6_2:73200886-73200905 | None:intergenic | 30.0% |
| ! | AGATCATGAGGCTTTTTATA+AGG | - | chr6_2:73200887-73200906 | None:intergenic | 30.0% |
| CTCCTAATGTTCATAAGATT+AGG | + | chr6_2:73200957-73200976 | Msa0928190:CDS | 30.0% | |
| ACAAGATAAACTCACCATTA+AGG | + | chr6_2:73201006-73201025 | Msa0928190:CDS | 30.0% | |
| !!! | AGTTTTGATTCTTGTGTTGA+AGG | + | chr6_2:73201103-73201122 | Msa0928190:CDS | 30.0% |
| ! | AAGTAATTATGTGCTTGTTG+AGG | + | chr6_2:73201126-73201145 | Msa0928190:CDS | 30.0% |
| !! | GGAAAATGATTTTGATGTTG+TGG | + | chr6_2:73201147-73201166 | Msa0928190:CDS | 30.0% |
| !! | AATGATTTTGATGTTGTGGA+AGG | + | chr6_2:73201151-73201170 | Msa0928190:CDS | 30.0% |
| ! | CATTTTACTAGTACACAACT+AGG | + | chr6_2:73201355-73201374 | Msa0928190:CDS | 30.0% |
| AACAACCAATTTCAAATGGT+TGG | + | chr6_2:73201406-73201425 | Msa0928190:CDS | 30.0% | |
| ! | CAAATCCAACCATTTGAAAT+TGG | - | chr6_2:73201414-73201433 | None:intergenic | 30.0% |
| AATCAGATCATTCATCATTC+AGG | + | chr6_2:73201502-73201521 | Msa0928190:CDS | 30.0% | |
| ATTCATCATTCAGGTAATCA+TGG | + | chr6_2:73201511-73201530 | Msa0928190:intron | 30.0% | |
| AAGCTAACATTATGGTAAGA+TGG | - | chr6_2:73201785-73201804 | None:intergenic | 30.0% | |
| !! | TGACTCATGCTTTAGAAAAT+AGG | + | chr6_2:73201846-73201865 | Msa0928190:intron | 30.0% |
| CCCCAAAAGAAAAATAATTC+TGG | + | chr6_2:73201937-73201956 | Msa0928190:intron | 30.0% | |
| ! | GCTACTTCAAACAATTTTGT+TGG | + | chr6_2:73202008-73202027 | Msa0928190:intron | 30.0% |
| ! | AGCTAACACAATTTTTACGA+GGG | - | chr6_2:73202279-73202298 | None:intergenic | 30.0% |
| ! | AAGCTAACACAATTTTTACG+AGG | - | chr6_2:73202280-73202299 | None:intergenic | 30.0% |
| AGTAATTACCTGCATTGTTA+TGG | - | chr6_2:73202321-73202340 | None:intergenic | 30.0% | |
| !!! | AGAAGTGGTTTTTGATTTGA+TGG | + | chr6_2:73202351-73202370 | Msa0928190:CDS | 30.0% |
| ! | TTGATGGACGTATATAATTC+AGG | + | chr6_2:73202367-73202386 | Msa0928190:CDS | 30.0% |
| AGTACTATGATTCCAAATCA+CGG | + | chr6_2:73202505-73202524 | Msa0928190:CDS | 30.0% | |
| !! | TTTTGATTAACACTAGGAGT+TGG | - | chr6_2:73202610-73202629 | None:intergenic | 30.0% |
| !!! | TGCAAGTTTTGATTAACACT+AGG | - | chr6_2:73202616-73202635 | None:intergenic | 30.0% |
| CATCATTGAACTATTCATCA+TGG | - | chr6_2:73202686-73202705 | None:intergenic | 30.0% | |
| !! | TAGAAATTTTGGTCCATTTG+AGG | - | chr6_2:73202769-73202788 | None:intergenic | 30.0% |
| CAAATGGACCAAAATTTCTA+TGG | + | chr6_2:73202769-73202788 | Msa0928190:CDS | 30.0% | |
| ! | CTTGTTGACCATAGAAATTT+TGG | - | chr6_2:73202780-73202799 | None:intergenic | 30.0% |
| CAAAATTTCTATGGTCAACA+AGG | + | chr6_2:73202778-73202797 | Msa0928190:CDS | 30.0% | |
| AAATTTCTATGGTCAACAAG+GGG | + | chr6_2:73202780-73202799 | Msa0928190:CDS | 30.0% | |
| TCGCAATTTCGTGAAAGTTA+GGG | - | chr6_2:73199963-73199982 | None:intergenic | 35.0% | |
| ATCGCAATTTCGTGAAAGTT+AGG | - | chr6_2:73199964-73199983 | None:intergenic | 35.0% | |
| ! | CTTTCACGAAATTGCGATTT+TGG | + | chr6_2:73199966-73199985 | Msa0928190:intron | 35.0% |
| CTACAGTTGCAAAACTTAGA+GGG | - | chr6_2:73200018-73200037 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | + | chr6_2:73200024-73200043 | Msa0928190:intron | 35.0% |
| AACGTATACCGAGTCAAAAT+TGG | + | chr6_2:73200102-73200121 | Msa0928190:intron | 35.0% | |
| GATTTGAATTCGATCTCTTG+AGG | + | chr6_2:73200339-73200358 | Msa0928190:intron | 35.0% | |
| ! | TTGACTTTGTTTCACCTCAA+AGG | - | chr6_2:73200430-73200449 | None:intergenic | 35.0% |
| AACATGTACCTGTTCACATT+AGG | - | chr6_2:73200467-73200486 | None:intergenic | 35.0% | |
| CAGGTACATGTTAAAGATGA+TGG | + | chr6_2:73200475-73200494 | Msa0928190:intron | 35.0% | |
| ! | TTTTCTGATGAACCACTCAT+TGG | - | chr6_2:73200554-73200573 | None:intergenic | 35.0% |
| GGTTCATCAGAAAATTTACG+AGG | + | chr6_2:73200560-73200579 | Msa0928190:CDS | 35.0% | |
| GGCAATTGCTAAATATGAAG+CGG | + | chr6_2:73200625-73200644 | Msa0928190:CDS | 35.0% | |
| ATGAGATTTAGAGAAGATCC+TGG | + | chr6_2:73200854-73200873 | Msa0928190:CDS | 35.0% | |
| ! | TCATGAGGCTTTTTATAAGG+GGG | - | chr6_2:73200884-73200903 | None:intergenic | 35.0% |
| ! | GGTTTGGAAGGTTTATGTTT+TGG | + | chr6_2:73200913-73200932 | Msa0928190:CDS | 35.0% |
| ! | CCAAATGGTTGTTTCCTTAA+TGG | - | chr6_2:73201023-73201042 | None:intergenic | 35.0% |
| CCATTAAGGAAACAACCATT+TGG | + | chr6_2:73201020-73201039 | Msa0928190:CDS | 35.0% | |
| AACAAGAGAAAACGTGAACT+TGG | + | chr6_2:73201253-73201272 | Msa0928190:CDS | 35.0% | |
| TGGAATTCATGTTGATCAAG+AGG | - | chr6_2:73201307-73201326 | None:intergenic | 35.0% | |
| CGACAACAACCAATTTCAAA+TGG | + | chr6_2:73201402-73201421 | Msa0928190:CDS | 35.0% | |
| ! | TGAATGATCTGATTTGCAAC+CGG | - | chr6_2:73201496-73201515 | None:intergenic | 35.0% |
| ! | CTAACACAATTTTTACGAGG+GGG | - | chr6_2:73202277-73202296 | None:intergenic | 35.0% |
| ! | GCTAACACAATTTTTACGAG+GGG | - | chr6_2:73202278-73202297 | None:intergenic | 35.0% |
| GTTATGGAATCCATAATCAG+CGG | - | chr6_2:73202305-73202324 | None:intergenic | 35.0% | |
| TATGGATTCCATAACAATGC+AGG | + | chr6_2:73202310-73202329 | Msa0928190:intron | 35.0% | |
| AACAATGCAGGTAATTACTC+AGG | + | chr6_2:73202322-73202341 | Msa0928190:intron | 35.0% | |
| !! | CTCATGACGGTGTTTTTATT+CGG | - | chr6_2:73202400-73202419 | None:intergenic | 35.0% |
| TTCAATGCCAGTTATGAACA+TGG | + | chr6_2:73202711-73202730 | Msa0928190:CDS | 35.0% | |
| GTTGAAACCATGTTCATAAC+TGG | - | chr6_2:73202721-73202740 | None:intergenic | 35.0% | |
| ATGAACATGGTTTCAACTTC+CGG | + | chr6_2:73202724-73202743 | Msa0928190:CDS | 35.0% | |
| !!! | CTGCATGTTTTGGTTAAATC+CGG | - | chr6_2:73202746-73202765 | None:intergenic | 35.0% |
| AATTTCTATGGTCAACAAGG+GGG | + | chr6_2:73202781-73202800 | Msa0928190:CDS | 35.0% | |
| TTTGCTTGCATTGGAACATT+AGG | - | chr6_2:73202835-73202854 | None:intergenic | 35.0% | |
| ! | TGAATCAAAGGTTGTTGTTG+AGG | - | chr6_2:73202860-73202879 | None:intergenic | 35.0% |
| !! | ATTTATTGACTCTCCTACTG+TGG | + | chr6_2:73202942-73202961 | Msa0928190:CDS | 35.0% |
| GCTAACTATTGAGGAACTAG+AGG | + | chr6_2:73199746-73199765 | Msa0928190:CDS | 40.0% | |
| GCAATTTCGTGAAAGTTAGG+GGG | - | chr6_2:73199961-73199980 | None:intergenic | 40.0% | |
| CGCAATTTCGTGAAAGTTAG+GGG | - | chr6_2:73199962-73199981 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+AGG | - | chr6_2:73200019-73200038 | None:intergenic | 40.0% | |
| AAACACGTGATACCTCACTT+AGG | + | chr6_2:73200069-73200088 | Msa0928190:intron | 40.0% | |
| AACACGTGATACCTCACTTA+GGG | + | chr6_2:73200070-73200089 | Msa0928190:intron | 40.0% | |
| ! | TACCGAGTCAAAATTGGCTT+TGG | + | chr6_2:73200108-73200127 | Msa0928190:intron | 40.0% |
| !! | ACCGAGTCAAAATTGGCTTT+GGG | + | chr6_2:73200109-73200128 | Msa0928190:intron | 40.0% |
| ! | TTTTGCACATGTGGCAGTTT+TGG | - | chr6_2:73200137-73200156 | None:intergenic | 40.0% |
| TGCCACATGTGCAAAACTTA+AGG | + | chr6_2:73200141-73200160 | Msa0928190:intron | 40.0% | |
| GCCACATGTGCAAAACTTAA+GGG | + | chr6_2:73200142-73200161 | Msa0928190:intron | 40.0% | |
| CCACATGTGCAAAACTTAAG+GGG | + | chr6_2:73200143-73200162 | Msa0928190:intron | 40.0% | |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | - | chr6_2:73200197-73200216 | None:intergenic | 40.0% |
| ! | ATCGCAACTTTGGGAAAGTT+AGG | + | chr6_2:73200199-73200218 | Msa0928190:intron | 40.0% |
| ! | TCGCAACTTTGGGAAAGTTA+GGG | + | chr6_2:73200200-73200219 | Msa0928190:intron | 40.0% |
| AGCTAACACCTAATGTGAAC+AGG | + | chr6_2:73200456-73200475 | Msa0928190:intron | 40.0% | |
| TATGGAGTAATACCTCACGA+GGG | + | chr6_2:73200524-73200543 | Msa0928190:CDS | 40.0% | |
| CATCAGAAAATTTACGAGGC+TGG | + | chr6_2:73200564-73200583 | Msa0928190:CDS | 40.0% | |
| TCATATTTAGCAATTGCCGC+TGG | - | chr6_2:73200623-73200642 | None:intergenic | 40.0% | |
| AGGGAACTTAATATGGTGTC+AGG | - | chr6_2:73200725-73200744 | None:intergenic | 40.0% | |
| CGGCACTAATGATGATAGAA+GGG | - | chr6_2:73200744-73200763 | None:intergenic | 40.0% | |
| CGGAGATTTCCATTGGAAAA+AGG | + | chr6_2:73200782-73200801 | Msa0928190:CDS | 40.0% | |
| !! | TTTTTATAAGGGGGTATGCC+AGG | - | chr6_2:73200875-73200894 | None:intergenic | 40.0% |
| AAAGCCTCATGATCTGAAGA+AGG | + | chr6_2:73200892-73200911 | Msa0928190:CDS | 40.0% | |
| CAAACCTTCTTCAGATCATG+AGG | - | chr6_2:73200899-73200918 | None:intergenic | 40.0% | |
| CTCATGATCTGAAGAAGGTT+TGG | + | chr6_2:73200897-73200916 | Msa0928190:CDS | 40.0% | |
| TGATCTGAAGAAGGTTTGGA+AGG | + | chr6_2:73200901-73200920 | Msa0928190:CDS | 40.0% | |
| !!! | GAAGGTTTATGTTTTGGCAG+CGG | + | chr6_2:73200919-73200938 | Msa0928190:CDS | 40.0% |
| !! | GATTTTGATGTTGTGGAAGG+CGG | + | chr6_2:73201154-73201173 | Msa0928190:CDS | 40.0% |
| TATGACGATGACGATGATGA+TGG | - | chr6_2:73201223-73201242 | None:intergenic | 40.0% | |
| TCATCGTCATCGTCATATGA+AGG | + | chr6_2:73201226-73201245 | Msa0928190:CDS | 40.0% | |
| GGTGAATCCTTCACATCAAT+GGG | + | chr6_2:73201901-73201920 | Msa0928190:intron | 40.0% | |
| GTGAATCCTTCACATCAATG+GGG | + | chr6_2:73201902-73201921 | Msa0928190:intron | 40.0% | |
| AATGCAGGTAATTACTCAGG+AGG | + | chr6_2:73202325-73202344 | Msa0928190:intron | 40.0% | |
| TGGAATCATCGTACTCATGA+CGG | - | chr6_2:73202413-73202432 | None:intergenic | 40.0% | |
| TTATGATTAACACCGGGAGT+TGG | - | chr6_2:73202433-73202452 | None:intergenic | 40.0% | |
| TGCCTGTTATGATTAACACC+GGG | - | chr6_2:73202439-73202458 | None:intergenic | 40.0% | |
| GTGCCTGTTATGATTAACAC+CGG | - | chr6_2:73202440-73202459 | None:intergenic | 40.0% | |
| GAACACTTGCATGGTAGATT+TGG | - | chr6_2:73202465-73202484 | None:intergenic | 40.0% | |
| CTTTGATTGACACCGTGATT+TGG | - | chr6_2:73202520-73202539 | None:intergenic | 40.0% | |
| ATGCATCGTCAAATCTACAC+CGG | + | chr6_2:73202541-73202560 | Msa0928190:CDS | 40.0% | |
| CTTGTTCTGTTGAACACTTC+CGG | - | chr6_2:73202563-73202582 | None:intergenic | 40.0% | |
| GAACACCATCATGAGTACTA+TGG | + | chr6_2:73202582-73202601 | Msa0928190:CDS | 40.0% | |
| TGGAACCATAGTACTCATGA+TGG | - | chr6_2:73202590-73202609 | None:intergenic | 40.0% | |
| ACACTTGAAGTGTAGACTTG+AGG | - | chr6_2:73202640-73202659 | None:intergenic | 40.0% | |
| CAAGTGTTCATGAACAACAG+AGG | + | chr6_2:73202653-73202672 | Msa0928190:CDS | 40.0% | |
| ! | GTTGAGGTATTTGCTTGCAT+TGG | - | chr6_2:73202844-73202863 | None:intergenic | 40.0% |
| !! | TAACTTGATGATGCCACAGT+AGG | - | chr6_2:73202958-73202977 | None:intergenic | 40.0% |
| TTTCTCAACGTTCGACCAAA+AGG | + | chr6_2:73202981-73203000 | Msa0928190:CDS | 40.0% | |
| TTCTCAACGTTCGACCAAAA+GGG | + | chr6_2:73202982-73203001 | Msa0928190:CDS | 40.0% | |
| TGCTATCGCTAACCCTTCAA+GGG | + | chr6_2:73199653-73199672 | Msa0928190:CDS | 45.0% | |
| TTGAAGCTTCTCCCCTTGAA+GGG | - | chr6_2:73199668-73199687 | None:intergenic | 45.0% | |
| ! | TTTGAAGCTTCTCCCCTTGA+AGG | - | chr6_2:73199669-73199688 | None:intergenic | 45.0% |
| ! | GTGCACAAGAGCGTGTATTA+AGG | + | chr6_2:73199874-73199893 | Msa0928190:CDS | 45.0% |
| CAGTTGCAAAACTTAGAGGG+CGG | - | chr6_2:73200015-73200034 | None:intergenic | 45.0% | |
| TTGATGTGACACCCTAAGTG+AGG | - | chr6_2:73200084-73200103 | None:intergenic | 45.0% | |
| !!! | CCCCAAAGCCAATTTTGACT+CGG | - | chr6_2:73200113-73200132 | None:intergenic | 45.0% |
| !! | CCGAGTCAAAATTGGCTTTG+GGG | + | chr6_2:73200110-73200129 | Msa0928190:intron | 45.0% |
| !! | CGAGTCAAAATTGGCTTTGG+GGG | + | chr6_2:73200111-73200130 | Msa0928190:intron | 45.0% |
| ! | CCCCTTAAGTTTTGCACATG+TGG | - | chr6_2:73200146-73200165 | None:intergenic | 45.0% |
| ! | CGCAACTTTGGGAAAGTTAG+GGG | + | chr6_2:73200201-73200220 | Msa0928190:intron | 45.0% |
| ! | GCAACTTTGGGAAAGTTAGG+GGG | + | chr6_2:73200202-73200221 | Msa0928190:intron | 45.0% |
| ATGGAAGTTTGTGATGCTCG+TGG | + | chr6_2:73200494-73200513 | Msa0928190:CDS | 45.0% | |
| CTATGGAGTAATACCTCACG+AGG | + | chr6_2:73200523-73200542 | Msa0928190:CDS | 45.0% | |
| CAGAAAATTTACGAGGCTGG+TGG | + | chr6_2:73200567-73200586 | Msa0928190:CDS | 45.0% | |
| ATTCGACAAAAACGGTCCAG+CGG | + | chr6_2:73200604-73200623 | Msa0928190:CDS | 45.0% | |
| GCGGCACTAATGATGATAGA+AGG | - | chr6_2:73200745-73200764 | None:intergenic | 45.0% | |
| ATGGAAATCTCCGTTGTGGT+GGG | - | chr6_2:73200775-73200794 | None:intergenic | 45.0% | |
| AATGGAAATCTCCGTTGTGG+TGG | - | chr6_2:73200776-73200795 | None:intergenic | 45.0% | |
| ACCACAACGGAGATTTCCAT+TGG | + | chr6_2:73200775-73200794 | Msa0928190:CDS | 45.0% | |
| TCCAATGGAAATCTCCGTTG+TGG | - | chr6_2:73200779-73200798 | None:intergenic | 45.0% | |
| ! | GGAGGAATGCCTTTTTCCAA+TGG | - | chr6_2:73200794-73200813 | None:intergenic | 45.0% |
| !! | AAAAAGGCATTCCTCCACCA+TGG | + | chr6_2:73200798-73200817 | Msa0928190:CDS | 45.0% |
| GGAACATAGTCAGACAGTCA+AGG | + | chr6_2:73200978-73200997 | Msa0928190:CDS | 45.0% | |
| TTCTCACATCTCTCTCTTGC+TGG | - | chr6_2:73201327-73201346 | None:intergenic | 45.0% | |
| GGGTGAATCCTTCACATCAA+TGG | + | chr6_2:73201900-73201919 | Msa0928190:intron | 45.0% | |
| ATGCTACCCCATTGATGTGA+AGG | - | chr6_2:73201911-73201930 | None:intergenic | 45.0% | |
| TCACATCAATGGGGTAGCAT+TGG | + | chr6_2:73201911-73201930 | Msa0928190:intron | 45.0% | |
| AGTACGATGATTCCAACTCC+CGG | + | chr6_2:73202418-73202437 | Msa0928190:CDS | 45.0% | |
| ! | CTCCCGGTGTTAATCATAAC+AGG | + | chr6_2:73202434-73202453 | Msa0928190:CDS | 45.0% |
| CACTTGCATGGTAGATTTGG+TGG | - | chr6_2:73202462-73202481 | None:intergenic | 45.0% | |
| !! | CCATTTGAGGCTGCATGTTT+TGG | - | chr6_2:73202756-73202775 | None:intergenic | 45.0% |
| CCAAAACATGCAGCCTCAAA+TGG | + | chr6_2:73202753-73202772 | Msa0928190:CDS | 45.0% | |
| !!! | ATTTTATTATTATTTTAACT+AGG | + | chr6_2:73199902-73199921 | Msa0928190:intron | 5.0% |
| !!! | CAATATTAATAATAATTTTT+AGG | - | chr6_2:73200245-73200264 | None:intergenic | 5.0% |
| GTGCTATCGCTAACCCTTCA+AGG | + | chr6_2:73199652-73199671 | Msa0928190:CDS | 50.0% | |
| GCTATCGCTAACCCTTCAAG+GGG | + | chr6_2:73199654-73199673 | Msa0928190:CDS | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | + | chr6_2:73200190-73200209 | Msa0928190:intron | 50.0% | |
| GATGCTCGTGGCTTCATCTA+TGG | + | chr6_2:73200506-73200525 | Msa0928190:CDS | 50.0% | |
| CGCCATGATTCTTTCCCTGT+GGG | - | chr6_2:73200827-73200846 | None:intergenic | 50.0% | |
| CCACAGGGAAAGAATCATGG+CGG | + | chr6_2:73200825-73200844 | Msa0928190:CDS | 50.0% | |
| ! | GTTAGCTTCGCCGCTGATTA+TGG | + | chr6_2:73202292-73202311 | Msa0928190:intron | 50.0% |
| GCAGGTAATTACTCAGGAGG+AGG | + | chr6_2:73202328-73202347 | Msa0928190:intron | 50.0% | |
| TTACTCAGGAGGAGGAGAAG+TGG | + | chr6_2:73202336-73202355 | Msa0928190:CDS | 50.0% | |
| CTACCATGCAAGTGTTCGAC+AGG | + | chr6_2:73202468-73202487 | Msa0928190:CDS | 50.0% | |
| TCTCCTGTCGAACACTTGCA+TGG | - | chr6_2:73202474-73202493 | None:intergenic | 50.0% | |
| GGGGGCCAAAATCGCAACTT+TGG | + | chr6_2:73200189-73200208 | Msa0928190:intron | 55.0% | |
| !! | CTCATTGGTTTGCCCTCGTG+AGG | - | chr6_2:73200539-73200558 | None:intergenic | 55.0% |
| CACGAGGGCAAACCAATGAG+TGG | + | chr6_2:73200539-73200558 | Msa0928190:CDS | 55.0% | |
| ! | AAGGCATTCCTCCACCATGG+TGG | + | chr6_2:73200801-73200820 | Msa0928190:CDS | 55.0% |
| GGCCCACAGGGAAAGAATCA+TGG | + | chr6_2:73200822-73200841 | Msa0928190:CDS | 55.0% | |
| CCGCCATGATTCTTTCCCTG+TGG | - | chr6_2:73200828-73200847 | None:intergenic | 55.0% | |
| GCTTGCACACGTTGGTCAAG+AGG | - | chr6_2:73201466-73201485 | None:intergenic | 55.0% | |
| TGACCAACGTGTGCAAGCTG+CGG | + | chr6_2:73201468-73201487 | Msa0928190:CDS | 55.0% | |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | + | chr6_2:73200034-73200053 | Msa0928190:intron | 60.0% |
| !! | CGTTGTGGTGGGTCGCAATG+CGG | - | chr6_2:73200764-73200783 | None:intergenic | 60.0% |
| CGCATTGCGACCCACCACAA+CGG | + | chr6_2:73200762-73200781 | Msa0928190:CDS | 60.0% | |
| TCTTTCCCTGTGGGCCACCA+TGG | - | chr6_2:73200818-73200837 | None:intergenic | 60.0% | |
| GTACCGCAGCTTGCACACGT+TGG | - | chr6_2:73201474-73201493 | None:intergenic | 60.0% | |
| ACGTGTGCAAGCTGCGGTAC+CGG | + | chr6_2:73201474-73201493 | Msa0928190:CDS | 60.0% | |
| CTCCACCATGGTGGCCCACA+GGG | + | chr6_2:73200810-73200829 | Msa0928190:CDS | 65.0% | |
| TTCCCTGTGGGCCACCATGG+TGG | - | chr6_2:73200815-73200834 | None:intergenic | 65.0% | |
| CCTGTGGGCCACCATGGTGG+AGG | - | chr6_2:73200812-73200831 | None:intergenic | 70.0% | |
| CCTCCACCATGGTGGCCCAC+AGG | + | chr6_2:73200809-73200828 | Msa0928190:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 73199630 | 73203017 | 73199630 | ID=Msa0928190;Name=Msa0928190 |
| chr6_2 | mRNA | 73199630 | 73203017 | 73199630 | ID=Msa0928190-mRNA-1;Parent=Msa0928190;Name=Msa0928190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|665 |
| chr6_2 | exon | 73199630 | 73199895 | 73199630 | ID=Msa0928190-mRNA-1:exon:12479;Parent=Msa0928190-mRNA-1 |
| chr6_2 | exon | 73200478 | 73201523 | 73200478 | ID=Msa0928190-mRNA-1:exon:12480;Parent=Msa0928190-mRNA-1 |
| chr6_2 | exon | 73202332 | 73203017 | 73202332 | ID=Msa0928190-mRNA-1:exon:12481;Parent=Msa0928190-mRNA-1 |
| chr6_2 | CDS | 73199630 | 73199895 | 73199630 | ID=Msa0928190-mRNA-1:cds;Parent=Msa0928190-mRNA-1 |
| chr6_2 | CDS | 73200478 | 73201523 | 73200478 | ID=Msa0928190-mRNA-1:cds;Parent=Msa0928190-mRNA-1 |
| chr6_2 | CDS | 73202332 | 73203017 | 73202332 | ID=Msa0928190-mRNA-1:cds;Parent=Msa0928190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
