Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928950 | XP_024630856.2 | 91.667 | 696 | 31 | 1 | 110 | 805 | 4 | 672 | 0.0 | 1332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928950 | sp|Q9SWG3|FAR1_ARATH | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.35e-127 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0928950 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928950 | MtrunA17_Chr2g0296781 | 75.364 | 686 | 167 | 2 | 120 | 805 | 1 | 684 | 0.0 | 1077 |
| Msa0928950 | MtrunA17_Chr6g0477261 | 77.526 | 574 | 128 | 1 | 232 | 805 | 1 | 573 | 0.0 | 920 |
| Msa0928950 | MtrunA17_Chr1g0196541 | 65.312 | 689 | 232 | 2 | 120 | 808 | 1 | 682 | 0.0 | 917 |
| Msa0928950 | MtrunA17_Chr5g0441581 | 48.226 | 620 | 304 | 6 | 110 | 723 | 21 | 629 | 0.0 | 582 |
| Msa0928950 | MtrunA17_Chr2g0291581 | 37.966 | 590 | 346 | 9 | 94 | 677 | 47 | 622 | 1.71e-133 | 413 |
| Msa0928950 | MtrunA17_Chr1g0207551 | 36.907 | 569 | 348 | 5 | 113 | 678 | 31 | 591 | 8.25e-126 | 397 |
| Msa0928950 | MtrunA17_Chr5g0448761 | 37.308 | 587 | 343 | 11 | 110 | 681 | 54 | 630 | 3.52e-123 | 389 |
| Msa0928950 | MtrunA17_Chr1g0202341 | 37.805 | 574 | 333 | 11 | 115 | 677 | 50 | 610 | 2.74e-122 | 384 |
| Msa0928950 | MtrunA17_Chr2g0329031 | 36.207 | 580 | 345 | 10 | 108 | 681 | 6 | 566 | 3.49e-121 | 382 |
| Msa0928950 | MtrunA17_Chr3g0080351 | 35.775 | 587 | 328 | 9 | 110 | 678 | 70 | 625 | 4.40e-117 | 374 |
| Msa0928950 | MtrunA17_Chr2g0291591 | 34.535 | 527 | 339 | 4 | 85 | 608 | 33 | 556 | 2.80e-106 | 338 |
| Msa0928950 | MtrunA17_Chr5g0440451 | 32.353 | 612 | 367 | 14 | 115 | 702 | 42 | 630 | 3.18e-93 | 313 |
| Msa0928950 | MtrunA17_Chr5g0448511 | 36.700 | 406 | 245 | 5 | 274 | 676 | 1 | 397 | 1.74e-86 | 285 |
| Msa0928950 | MtrunA17_Chr2g0287651 | 28.479 | 618 | 425 | 7 | 120 | 730 | 79 | 686 | 3.09e-86 | 293 |
| Msa0928950 | MtrunA17_Chr3g0118611 | 37.530 | 413 | 244 | 5 | 286 | 697 | 118 | 517 | 1.30e-84 | 286 |
| Msa0928950 | MtrunA17_Chr2g0324011 | 29.879 | 579 | 374 | 10 | 113 | 676 | 7 | 568 | 1.13e-81 | 273 |
| Msa0928950 | MtrunA17_Chr8g0363841 | 30.703 | 583 | 371 | 12 | 112 | 676 | 10 | 577 | 8.90e-80 | 270 |
| Msa0928950 | MtrunA17_Chr2g0287061 | 31.634 | 569 | 329 | 13 | 115 | 674 | 182 | 699 | 1.76e-78 | 270 |
| Msa0928950 | MtrunA17_Chr2g0276841 | 28.869 | 672 | 409 | 19 | 106 | 742 | 60 | 697 | 3.59e-75 | 258 |
| Msa0928950 | MtrunA17_Chr6g0476441 | 68.947 | 190 | 58 | 1 | 616 | 805 | 1 | 189 | 1.00e-74 | 245 |
| Msa0928950 | MtrunA17_Chr1g0198761 | 28.693 | 704 | 424 | 24 | 119 | 783 | 50 | 714 | 3.69e-72 | 251 |
| Msa0928950 | MtrunA17_Chr6g0458391 | 28.399 | 581 | 379 | 12 | 105 | 676 | 213 | 765 | 7.98e-71 | 248 |
| Msa0928950 | MtrunA17_Chr1g0203051 | 27.258 | 609 | 399 | 13 | 76 | 657 | 25 | 616 | 3.44e-68 | 238 |
| Msa0928950 | MtrunA17_Chr1g0203721 | 29.145 | 573 | 378 | 10 | 118 | 676 | 65 | 623 | 4.22e-68 | 242 |
| Msa0928950 | MtrunA17_Chr3g0082121 | 30.298 | 604 | 369 | 18 | 95 | 676 | 17 | 590 | 1.72e-65 | 232 |
| Msa0928950 | MtrunA17_Chr2g0294841 | 26.957 | 575 | 387 | 11 | 116 | 672 | 45 | 604 | 8.97e-61 | 219 |
| Msa0928950 | MtrunA17_Chr2g0290391 | 26.030 | 607 | 403 | 16 | 92 | 674 | 27 | 611 | 1.94e-51 | 192 |
| Msa0928950 | MtrunA17_Chr5g0431001 | 33.019 | 318 | 202 | 5 | 209 | 520 | 168 | 480 | 2.62e-51 | 187 |
| Msa0928950 | MtrunA17_Chr1g0164591 | 33.016 | 315 | 187 | 7 | 198 | 504 | 10 | 308 | 5.34e-47 | 170 |
| Msa0928950 | MtrunA17_Chr7g0258861 | 33.101 | 287 | 186 | 3 | 109 | 389 | 3 | 289 | 9.21e-47 | 169 |
| Msa0928950 | MtrunA17_Chr6g0476431 | 59.302 | 86 | 35 | 0 | 120 | 205 | 1 | 86 | 2.70e-30 | 114 |
| Msa0928950 | MtrunA17_Chr6g0451441 | 31.183 | 186 | 112 | 5 | 106 | 278 | 65 | 247 | 4.97e-20 | 94.4 |
| Msa0928950 | MtrunA17_Chr2g0308841 | 25.108 | 231 | 158 | 3 | 448 | 673 | 4 | 224 | 1.75e-19 | 89.4 |
| Msa0928950 | MtrunA17_Chr1g0172041 | 33.636 | 110 | 72 | 1 | 588 | 697 | 1 | 109 | 5.23e-14 | 68.9 |
| Msa0928950 | MtrunA17_Chr3g0077731 | 58.442 | 77 | 31 | 1 | 729 | 805 | 1 | 76 | 2.80e-13 | 67.4 |
| Msa0928950 | MtrunA17_Chr2g0329361 | 30.400 | 125 | 71 | 3 | 115 | 228 | 60 | 179 | 3.43e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0928950 | AT4G15090.1 | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.43e-128 | 403 |
| Msa0928950 | AT4G15090.5 | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.43e-128 | 403 |
| Msa0928950 | AT4G15090.3 | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.43e-128 | 403 |
| Msa0928950 | AT4G15090.2 | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.43e-128 | 403 |
| Msa0928950 | AT4G15090.4 | 34.191 | 661 | 417 | 10 | 98 | 751 | 33 | 682 | 4.43e-128 | 403 |
| Msa0928950 | AT4G38180.1 | 35.052 | 582 | 363 | 8 | 103 | 676 | 60 | 634 | 1.04e-117 | 375 |
| Msa0928950 | AT1G52520.1 | 34.522 | 617 | 372 | 13 | 69 | 677 | 47 | 639 | 8.87e-117 | 370 |
| Msa0928950 | AT3G22170.2 | 35.993 | 589 | 329 | 10 | 109 | 679 | 63 | 621 | 7.13e-116 | 372 |
| Msa0928950 | AT3G22170.1 | 35.993 | 589 | 329 | 10 | 109 | 679 | 63 | 621 | 7.13e-116 | 372 |
| Msa0928950 | AT1G76320.3 | 36.111 | 576 | 339 | 10 | 120 | 684 | 1 | 558 | 6.44e-113 | 359 |
| Msa0928950 | AT1G76320.2 | 36.111 | 576 | 339 | 10 | 120 | 684 | 1 | 558 | 1.76e-112 | 360 |
| Msa0928950 | AT1G76320.1 | 36.111 | 576 | 339 | 10 | 120 | 684 | 1 | 558 | 1.99e-112 | 359 |
| Msa0928950 | AT1G76320.4 | 36.111 | 576 | 339 | 10 | 120 | 684 | 1 | 558 | 1.99e-112 | 359 |
| Msa0928950 | AT1G80010.1 | 34.609 | 601 | 357 | 16 | 103 | 680 | 78 | 665 | 1.01e-104 | 339 |
| Msa0928950 | AT4G19990.3 | 32.828 | 594 | 315 | 10 | 119 | 681 | 24 | 564 | 1.53e-94 | 312 |
| Msa0928950 | AT4G19990.4 | 32.828 | 594 | 315 | 10 | 119 | 681 | 24 | 564 | 1.53e-94 | 312 |
| Msa0928950 | AT4G19990.5 | 32.828 | 594 | 315 | 10 | 119 | 681 | 24 | 564 | 1.98e-94 | 312 |
| Msa0928950 | AT4G19990.7 | 32.828 | 594 | 315 | 10 | 119 | 681 | 38 | 578 | 2.41e-94 | 312 |
| Msa0928950 | AT4G19990.6 | 32.828 | 594 | 315 | 10 | 119 | 681 | 24 | 564 | 2.46e-94 | 313 |
| Msa0928950 | AT4G19990.2 | 32.828 | 594 | 315 | 10 | 119 | 681 | 24 | 564 | 2.46e-94 | 313 |
| Msa0928950 | AT4G19990.1 | 34.137 | 539 | 299 | 9 | 146 | 681 | 22 | 507 | 1.24e-92 | 306 |
| Msa0928950 | AT2G27110.2 | 32.318 | 591 | 364 | 8 | 91 | 676 | 20 | 579 | 1.30e-91 | 307 |
| Msa0928950 | AT2G27110.1 | 32.318 | 591 | 364 | 8 | 91 | 676 | 20 | 579 | 1.30e-91 | 307 |
| Msa0928950 | AT2G32250.5 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 1.64e-90 | 302 |
| Msa0928950 | AT2G32250.2 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 3.61e-90 | 302 |
| Msa0928950 | AT2G32250.4 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 3.61e-90 | 302 |
| Msa0928950 | AT2G32250.6 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 3.72e-90 | 302 |
| Msa0928950 | AT2G32250.1 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 3.72e-90 | 302 |
| Msa0928950 | AT2G32250.3 | 32.918 | 562 | 326 | 8 | 115 | 673 | 37 | 550 | 3.72e-90 | 302 |
| Msa0928950 | AT2G32250.7 | 32.855 | 557 | 323 | 8 | 120 | 673 | 1 | 509 | 1.67e-89 | 299 |
| Msa0928950 | AT2G32250.8 | 32.855 | 557 | 323 | 8 | 120 | 673 | 1 | 509 | 1.77e-89 | 299 |
| Msa0928950 | AT2G27110.3 | 34.554 | 437 | 269 | 5 | 241 | 676 | 14 | 434 | 2.73e-81 | 276 |
| Msa0928950 | AT3G06250.2 | 30.382 | 576 | 341 | 12 | 106 | 674 | 180 | 702 | 1.05e-78 | 270 |
| Msa0928950 | AT3G06250.1 | 30.382 | 576 | 341 | 12 | 106 | 674 | 180 | 702 | 1.05e-78 | 270 |
| Msa0928950 | AT3G06250.3 | 30.382 | 576 | 341 | 12 | 106 | 674 | 180 | 702 | 1.05e-78 | 270 |
| Msa0928950 | AT4G38170.1 | 34.937 | 395 | 245 | 5 | 288 | 680 | 19 | 403 | 3.13e-76 | 258 |
| Msa0928950 | AT5G18960.2 | 31.217 | 567 | 333 | 17 | 115 | 674 | 210 | 726 | 1.70e-75 | 261 |
| Msa0928950 | AT5G18960.1 | 31.217 | 567 | 333 | 17 | 115 | 674 | 210 | 726 | 1.70e-75 | 261 |
| Msa0928950 | AT1G10240.2 | 28.595 | 619 | 376 | 19 | 88 | 673 | 19 | 604 | 1.19e-67 | 238 |
| Msa0928950 | AT1G10240.1 | 28.595 | 619 | 376 | 19 | 88 | 673 | 19 | 604 | 1.19e-67 | 238 |
| Msa0928950 | AT5G28530.3 | 25.463 | 648 | 417 | 19 | 116 | 728 | 55 | 671 | 4.93e-51 | 191 |
| Msa0928950 | AT5G28530.2 | 25.463 | 648 | 417 | 19 | 116 | 728 | 55 | 671 | 4.93e-51 | 191 |
| Msa0928950 | AT5G28530.1 | 25.460 | 652 | 416 | 20 | 116 | 728 | 55 | 675 | 3.08e-50 | 188 |
| Msa0928950 | AT5G28530.5 | 26.649 | 379 | 247 | 12 | 359 | 728 | 252 | 608 | 1.83e-27 | 119 |
| Msa0928950 | AT5G28530.4 | 26.632 | 383 | 246 | 13 | 359 | 728 | 252 | 612 | 1.32e-26 | 116 |
Find 110 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGTTTATTTGAGTTTA+AGG | 0.126982 | 6_2:-75374137 | Msa0928950:CDS |
| ATTGCTTGTATAAGTCATTT+TGG | 0.199496 | 6_2:-75374376 | Msa0928950:CDS |
| CTTGAACTGGATGCTAAAAT+AGG | 0.226174 | 6_2:+75375935 | None:intergenic |
| AAGAATTATGCAAGATGTTT+AGG | 0.244212 | 6_2:-75375645 | Msa0928950:CDS |
| TATGCAAGATGTTTAGGTTT+TGG | 0.256539 | 6_2:-75375639 | Msa0928950:CDS |
| TCCATCCTGGTCAGTAATTA+TGG | 0.258712 | 6_2:+75374849 | None:intergenic |
| TTTGAGCATAAGTGATTTCA+TGG | 0.262311 | 6_2:-75374677 | Msa0928950:CDS |
| TGTATGTGAGAGACACATTT+TGG | 0.270477 | 6_2:-75374564 | Msa0928950:CDS |
| CACCATCGATGGCGAGCTTT+CGG | 0.279320 | 6_2:+75374796 | None:intergenic |
| TGGAACAATTACTATTTCTA+AGG | 0.295449 | 6_2:-75375451 | Msa0928950:CDS |
| GGAAATCAAATTTCAATTGA+TGG | 0.300295 | 6_2:+75375957 | None:intergenic |
| TAAAATTGAAAAGGAAAATA+TGG | 0.301034 | 6_2:-75374425 | Msa0928950:CDS |
| TATACAAGCAATAATTCTAT+TGG | 0.306437 | 6_2:+75374387 | None:intergenic |
| TAGTATCCTCCTTCGACAAT+AGG | 0.312589 | 6_2:+75374932 | None:intergenic |
| AGGGCTGCTTATGAGTATTT+TGG | 0.315150 | 6_2:-75375063 | Msa0928950:CDS |
| TGAAGAAGCAAATCCGTAAA+AGG | 0.325895 | 6_2:+75373931 | None:intergenic |
| TGCTGTTTATTTGAGTTTAA+GGG | 0.334665 | 6_2:-75374136 | Msa0928950:CDS |
| CTAAAATATCTTGATTTGCT+TGG | 0.342688 | 6_2:+75375396 | None:intergenic |
| ATATAGACCCTAGTATAAAA+AGG | 0.351811 | 6_2:-75375362 | Msa0928950:CDS |
| ACGCTGCAACTCTTCATTTC+CGG | 0.353530 | 6_2:+75373973 | None:intergenic |
| GAACAAAATCAGAACATATA+AGG | 0.353968 | 6_2:+75376083 | None:intergenic |
| TTTCTTGGTTGTTCACTACT+TGG | 0.357896 | 6_2:-75374903 | Msa0928950:CDS |
| CTTACTATTGTCTCTTGAAC+TGG | 0.373416 | 6_2:+75375922 | None:intergenic |
| TCATGCTTTCTTTGAGAGAA+TGG | 0.375982 | 6_2:-75374272 | Msa0928950:CDS |
| ACCATCGATGGCGAGCTTTC+GGG | 0.381382 | 6_2:+75374797 | None:intergenic |
| TTGTGTTACAGAAAGTAAAA+AGG | 0.383201 | 6_2:-75374230 | Msa0928950:CDS |
| CATGGTCAGTCAGTTCTGTT+AGG | 0.383640 | 6_2:-75374961 | Msa0928950:CDS |
| CTTGTGGCATATAATGAAAA+AGG | 0.386165 | 6_2:-75374773 | Msa0928950:CDS |
| TAGAATAGAGAACTTAAAAC+TGG | 0.390920 | 6_2:-75373870 | Msa0928950:CDS |
| AGTATCCTCCTTCGACAATA+GGG | 0.392582 | 6_2:+75374933 | None:intergenic |
| TTGAACTGGATGCTAAAATA+GGG | 0.396461 | 6_2:+75375936 | None:intergenic |
| AATCAGAACATATAAGGTTA+TGG | 0.408232 | 6_2:+75376089 | None:intergenic |
| GGATATGATAACCTTACATT+CGG | 0.409109 | 6_2:-75375267 | Msa0928950:CDS |
| CCTTTACTTCGAGTCGCTAC+AGG | 0.409218 | 6_2:+75373767 | None:intergenic |
| AAGGGCGTCCTCCTTCAAAA+AGG | 0.415773 | 6_2:-75373748 | Msa0928950:CDS |
| TTAAATTTCATGCCAACCTT+AGG | 0.424975 | 6_2:+75375696 | None:intergenic |
| GTTTGATGAGCGTCATCGTT+GGG | 0.431278 | 6_2:-75374593 | Msa0928950:CDS |
| AAGTGAGGCGGCTTCGACTT+GGG | 0.432744 | 6_2:-75375215 | Msa0928950:CDS |
| ATATTTATTTGTTAAGTAAG+TGG | 0.436838 | 6_2:+75375020 | None:intergenic |
| TTAATATCCTTCCTCCATCT+TGG | 0.438245 | 6_2:+75374037 | None:intergenic |
| CTTGTTATATATTGCCAAGA+TGG | 0.439590 | 6_2:-75374051 | Msa0928950:CDS |
| AAGAAGCTTGCTGGAAAGAA+AGG | 0.445180 | 6_2:-75373695 | Msa0928950:CDS |
| CATTCTTCATTGCTCCATCC+TGG | 0.449843 | 6_2:+75374836 | None:intergenic |
| CATGATAATGAATGGTTGAA+AGG | 0.452805 | 6_2:-75374619 | Msa0928950:CDS |
| GATATGATAACCTTACATTC+GGG | 0.457280 | 6_2:-75375266 | Msa0928950:CDS |
| ATTTGAATCTCAATTTCAAA+AGG | 0.459389 | 6_2:-75374353 | Msa0928950:CDS |
| CAAATTTCAATTGATGGTTG+AGG | 0.460215 | 6_2:+75375963 | None:intergenic |
| ACTCCAACAAAAGGAGCAAA+AGG | 0.476605 | 6_2:+75374991 | None:intergenic |
| CAAAGAGTTTCAAGTAGAAG+TGG | 0.481571 | 6_2:-75374311 | Msa0928950:CDS |
| AGATATACACTTATTAAAAG+TGG | 0.483850 | 6_2:-75374010 | Msa0928950:CDS |
| TTTGGGCAGATGCGAGATGT+AGG | 0.485083 | 6_2:-75375083 | Msa0928950:CDS |
| TACTTACATTAATCCCAGCT+TGG | 0.488151 | 6_2:+75375322 | None:intergenic |
| CCTGTAGCGACTCGAAGTAA+AGG | 0.488591 | 6_2:-75373767 | Msa0928950:CDS |
| TAGCATGAAAACACACTGTA+AGG | 0.490277 | 6_2:-75375502 | Msa0928950:CDS |
| AGTTAAAGACATAATGTTCA+AGG | 0.493487 | 6_2:-75374197 | Msa0928950:CDS |
| CTGTAGCGACTCGAAGTAAA+GGG | 0.498287 | 6_2:-75373766 | Msa0928950:CDS |
| ATTGAAAGATAAAATTGAAA+AGG | 0.501824 | 6_2:-75374434 | Msa0928950:CDS |
| TCCCGAAAGCTCGCCATCGA+TGG | 0.503126 | 6_2:-75374798 | Msa0928950:CDS |
| TTTGTTGGAGTAAATCATCA+TGG | 0.506547 | 6_2:-75374979 | Msa0928950:CDS |
| AGGCGGCTTCGACTTGGGAC+AGG | 0.507987 | 6_2:-75375210 | Msa0928950:CDS |
| TTGGGCAGATGCGAGATGTA+GGG | 0.512318 | 6_2:-75375082 | Msa0928950:CDS |
| TGATGATTTACTCCAACAAA+AGG | 0.515106 | 6_2:+75374982 | None:intergenic |
| TGTTTGATGAGCGTCATCGT+TGG | 0.518510 | 6_2:-75374594 | Msa0928950:CDS |
| AAAGTGAGGCGGCTTCGACT+TGG | 0.518819 | 6_2:-75375216 | Msa0928950:CDS |
| GACGACAACGAGTTTGAAAA+CGG | 0.527121 | 6_2:+75376025 | None:intergenic |
| CGGCGGTGAATGTTGGTAAC+CGG | 0.527849 | 6_2:+75376045 | None:intergenic |
| TTGGAGGTTAATGACCAAGC+TGG | 0.528235 | 6_2:-75375336 | Msa0928950:CDS |
| ATGATAATGAATGGTTGAAA+GGG | 0.531139 | 6_2:-75374618 | Msa0928950:CDS |
| AAATGATTTATCAAAAGTAA+TGG | 0.531224 | 6_2:-75373894 | Msa0928950:CDS |
| AACATATAAGGTTATGGAGA+AGG | 0.534401 | 6_2:+75376095 | None:intergenic |
| TGGAGGTTAATGACCAAGCT+GGG | 0.539674 | 6_2:-75375335 | Msa0928950:CDS |
| CTCGCCATCGATGGTGCTTG+TGG | 0.540244 | 6_2:-75374789 | Msa0928950:CDS |
| TACTCACATAGCTTCTTGCA+CGG | 0.540398 | 6_2:+75375553 | None:intergenic |
| ATGAACTTCATGATAATGAA+TGG | 0.543870 | 6_2:-75374627 | Msa0928950:CDS |
| AAATGAAGATGATGAACCTA+AGG | 0.544931 | 6_2:-75375712 | Msa0928950:CDS |
| TTGAAAACGGCGGTGAATGT+TGG | 0.547831 | 6_2:+75376038 | None:intergenic |
| AAGTGATTTCATGGAGAAGT+GGG | 0.549527 | 6_2:-75374668 | Msa0928950:CDS |
| GAAGATGATGAACCTAAGGT+TGG | 0.554642 | 6_2:-75375708 | Msa0928950:CDS |
| AAATCCGTAAAAGGCATCGC+AGG | 0.562477 | 6_2:+75373940 | None:intergenic |
| TAAGTGATTTCATGGAGAAG+TGG | 0.562788 | 6_2:-75374669 | Msa0928950:CDS |
| GTTCAACAACACAAACTCAC+CGG | 0.564921 | 6_2:-75376064 | Msa0928950:CDS |
| ATGGCGAGCTTTCGGGAAGA+CGG | 0.568527 | 6_2:+75374804 | None:intergenic |
| AATGTATGTGTGTCTTCAGA+TGG | 0.571681 | 6_2:-75375471 | Msa0928950:CDS |
| TGGTCAGTAATTATGGCTTG+TGG | 0.579259 | 6_2:+75374856 | None:intergenic |
| TGCTTTCTTTGAGAGAATGG+AGG | 0.581817 | 6_2:-75374269 | Msa0928950:CDS |
| GTTATATATTGCCAAGATGG+AGG | 0.585753 | 6_2:-75374048 | Msa0928950:CDS |
| AGGTTGCGCCCTATTGTCGA+AGG | 0.587751 | 6_2:-75374941 | Msa0928950:CDS |
| TGTTAAGTAAGTGGTGTCGA+AGG | 0.588670 | 6_2:+75375029 | None:intergenic |
| GAAACTACATTGACAAAGTG+AGG | 0.593331 | 6_2:-75375230 | Msa0928950:CDS |
| TATATTGCCAAGATGGAGGA+AGG | 0.599926 | 6_2:-75374044 | Msa0928950:CDS |
| CACTTATCAAAGTCAAGAAG+AGG | 0.608354 | 6_2:-75373648 | Msa0928950:CDS |
| TCTTGGCAATATATAACAAG+AGG | 0.613918 | 6_2:+75374054 | None:intergenic |
| CATGAAATTTAATTCTACAG+AGG | 0.616241 | 6_2:-75375685 | Msa0928950:CDS |
| ACAAGCCATAATTACTGACC+AGG | 0.626330 | 6_2:-75374854 | Msa0928950:CDS |
| AGCAATGAAGAATGCAGTTG+AGG | 0.631682 | 6_2:-75374827 | Msa0928950:CDS |
| AATGTGTCTCTCACATACAC+AGG | 0.631924 | 6_2:+75374568 | None:intergenic |
| GCCATAATTACTGACCAGGA+TGG | 0.636449 | 6_2:-75374850 | Msa0928950:CDS |
| TCTATGGTTGTTGAAGCAAG+TGG | 0.641961 | 6_2:-75375288 | Msa0928950:CDS |
| CTTGGCAATATATAACAAGA+GGG | 0.647143 | 6_2:+75374055 | None:intergenic |
| TCACATAAATGAAAATTGTG+AGG | 0.656952 | 6_2:-75375748 | Msa0928950:CDS |
| TATGCCACAAGCACCATCGA+TGG | 0.658002 | 6_2:+75374785 | None:intergenic |
| TTGCGCCCTATTGTCGAAGG+AGG | 0.658239 | 6_2:-75374938 | Msa0928950:CDS |
| ACTTGGTTAGAATGTATGCG+TGG | 0.661118 | 6_2:-75374886 | Msa0928950:CDS |
| ATATATGGAAGAGACAATCA+CGG | 0.693219 | 6_2:-75376155 | None:intergenic |
| CTGTGAGCTTAAGAACACAA+AGG | 0.694006 | 6_2:+75374095 | None:intergenic |
| CTTGGTTAGAATGTATGCGT+GGG | 0.711086 | 6_2:-75374885 | Msa0928950:CDS |
| GTAGCAATGCTGATAAACAG+AGG | 0.712390 | 6_2:+75375991 | None:intergenic |
| ATATGATAACCTTACATTCG+GGG | 0.715139 | 6_2:-75375265 | Msa0928950:CDS |
| ACTACATTGACAAAGTGAGG+CGG | 0.739143 | 6_2:-75375227 | Msa0928950:CDS |
| GACAACGAGTTTGAAAACGG+CGG | 0.794970 | 6_2:+75376028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATGTAAGTAGAAATTTT+CGG | - | chr6_2:75374444-75374463 | Msa0928950:CDS | 15.0% |
| !!! | TCTAACAAAATAATTTTGAA+TGG | + | chr6_2:75374582-75374601 | None:intergenic | 15.0% |
| !!! | TAGTGAATTTTATTATGTAA+TGG | - | chr6_2:75374616-75374635 | Msa0928950:CDS | 15.0% |
| !!! | ATATTTATTTGTTAAGTAAG+TGG | + | chr6_2:75374738-75374757 | None:intergenic | 15.0% |
| !! | ATTGAAAGATAAAATTGAAA+AGG | - | chr6_2:75375321-75375340 | Msa0928950:CDS | 15.0% |
| !! | TAAAATTGAAAAGGAAAATA+TGG | - | chr6_2:75375330-75375349 | Msa0928950:CDS | 15.0% |
| !! | AAATGATTTATCAAAAGTAA+TGG | - | chr6_2:75375861-75375880 | Msa0928950:intron | 15.0% |
| !! | ATCAACTGAATTAAAAGTAA+AGG | + | chr6_2:75373903-75373922 | None:intergenic | 20.0% |
| !!! | TAAAAAATTTGTTGCATTAG+TGG | - | chr6_2:75373941-75373960 | Msa0928950:CDS | 20.0% |
| !!! | GAAAAAAGTATTTTACTCTA+GGG | - | chr6_2:75374174-75374193 | Msa0928950:CDS | 20.0% |
| !!! | ATTTGGCTTTAAAAGATTTT+TGG | + | chr6_2:75374231-75374250 | None:intergenic | 20.0% |
| !!! | ATTTTATTATGTAATGGATG+TGG | - | chr6_2:75374622-75374641 | Msa0928950:CDS | 20.0% |
| !! | TATACAAGCAATAATTCTAT+TGG | + | chr6_2:75375371-75375390 | None:intergenic | 20.0% |
| !! | ATTTGAATCTCAATTTCAAA+AGG | - | chr6_2:75375402-75375421 | Msa0928950:CDS | 20.0% |
| !! | AGATATACACTTATTAAAAG+TGG | - | chr6_2:75375745-75375764 | Msa0928950:CDS | 20.0% |
| !!! | TTGATAAATCATTTTCAGTA+TGG | + | chr6_2:75375855-75375874 | None:intergenic | 20.0% |
| ! | AATCAGAACATATAAGGTTA+TGG | + | chr6_2:75373669-75373688 | None:intergenic | 25.0% |
| ! | GAACAAAATCAGAACATATA+AGG | + | chr6_2:75373675-75373694 | None:intergenic | 25.0% |
| ! | GGAAATCAAATTTCAATTGA+TGG | + | chr6_2:75373801-75373820 | None:intergenic | 25.0% |
| ! | TCACATAAATGAAAATTGTG+AGG | - | chr6_2:75374007-75374026 | Msa0928950:CDS | 25.0% |
| ! | CATGAAATTTAATTCTACAG+AGG | - | chr6_2:75374070-75374089 | Msa0928950:CDS | 25.0% |
| ! | AAGAATTATGCAAGATGTTT+AGG | - | chr6_2:75374110-75374129 | Msa0928950:CDS | 25.0% |
| !!! | GGAAAAAAGTATTTTACTCT+AGG | - | chr6_2:75374173-75374192 | Msa0928950:CDS | 25.0% |
| !!! | TGGAACAATTACTATTTCTA+AGG | - | chr6_2:75374304-75374323 | Msa0928950:CDS | 25.0% |
| !!! | CTAAAATATCTTGATTTGCT+TGG | + | chr6_2:75374362-75374381 | None:intergenic | 25.0% |
| ! | ATATAGACCCTAGTATAAAA+AGG | - | chr6_2:75374393-75374412 | Msa0928950:CDS | 25.0% |
| !!! | TCGTTTACGAAATGTTTTTT+GGG | - | chr6_2:75374655-75374674 | Msa0928950:CDS | 25.0% |
| !!! | AGGATACTAAAACTTTTTCT+TGG | - | chr6_2:75374837-75374856 | Msa0928950:CDS | 25.0% |
| !! | ATGAACTTCATGATAATGAA+TGG | - | chr6_2:75375128-75375147 | Msa0928950:CDS | 25.0% |
| !! | ATGATAATGAATGGTTGAAA+GGG | - | chr6_2:75375137-75375156 | Msa0928950:CDS | 25.0% |
| !! | ATTGCTTGTATAAGTCATTT+TGG | - | chr6_2:75375379-75375398 | Msa0928950:CDS | 25.0% |
| !! | AAACTCTTTGAATTTTGCAT+TGG | + | chr6_2:75375434-75375453 | None:intergenic | 25.0% |
| ! | TTGTGTTACAGAAAGTAAAA+AGG | - | chr6_2:75375525-75375544 | Msa0928950:CDS | 25.0% |
| ! | AGTTAAAGACATAATGTTCA+AGG | - | chr6_2:75375558-75375577 | Msa0928950:CDS | 25.0% |
| !! | ATGCTGTTTATTTGAGTTTA+AGG | - | chr6_2:75375618-75375637 | Msa0928950:CDS | 25.0% |
| !! | TGCTGTTTATTTGAGTTTAA+GGG | - | chr6_2:75375619-75375638 | Msa0928950:CDS | 25.0% |
| ! | TAGAATAGAGAACTTAAAAC+TGG | - | chr6_2:75375885-75375904 | Msa0928950:intron | 25.0% |
| AACATATAAGGTTATGGAGA+AGG | + | chr6_2:75373663-75373682 | None:intergenic | 30.0% | |
| ! | CAAATTTCAATTGATGGTTG+AGG | + | chr6_2:75373795-75373814 | None:intergenic | 30.0% |
| TTGAACTGGATGCTAAAATA+GGG | + | chr6_2:75373822-75373841 | None:intergenic | 30.0% | |
| GAATTAAAAGTAAAGGCAAC+AGG | + | chr6_2:75373896-75373915 | None:intergenic | 30.0% | |
| AAATGAAGATGATGAACCTA+AGG | - | chr6_2:75374043-75374062 | Msa0928950:CDS | 30.0% | |
| TTAAATTTCATGCCAACCTT+AGG | + | chr6_2:75374062-75374081 | None:intergenic | 30.0% | |
| !! | TATGCAAGATGTTTAGGTTT+TGG | - | chr6_2:75374116-75374135 | Msa0928950:CDS | 30.0% |
| TAGCACAATCAGTACAAAAA+AGG | - | chr6_2:75374142-75374161 | Msa0928950:CDS | 30.0% | |
| AGCACAATCAGTACAAAAAA+GGG | - | chr6_2:75374143-75374162 | Msa0928950:CDS | 30.0% | |
| ! | CCAATCTCCTTTTTATACTA+GGG | + | chr6_2:75374403-75374422 | None:intergenic | 30.0% |
| ! | TCCAATCTCCTTTTTATACT+AGG | + | chr6_2:75374404-75374423 | None:intergenic | 30.0% |
| TAGTATAAAAAGGAGATTGG+AGG | - | chr6_2:75374403-75374422 | Msa0928950:CDS | 30.0% | |
| ! | AAGTAGAAATTTTCGGTCTA+TGG | - | chr6_2:75374451-75374470 | Msa0928950:CDS | 30.0% |
| GGATATGATAACCTTACATT+CGG | - | chr6_2:75374488-75374507 | Msa0928950:CDS | 30.0% | |
| GATATGATAACCTTACATTC+GGG | - | chr6_2:75374489-75374508 | Msa0928950:CDS | 30.0% | |
| ATATGATAACCTTACATTCG+GGG | - | chr6_2:75374490-75374509 | Msa0928950:CDS | 30.0% | |
| !!! | GTCGTTTACGAAATGTTTTT+TGG | - | chr6_2:75374654-75374673 | Msa0928950:CDS | 30.0% |
| TGATGATTTACTCCAACAAA+AGG | + | chr6_2:75374776-75374795 | None:intergenic | 30.0% | |
| TTTGTTGGAGTAAATCATCA+TGG | - | chr6_2:75374776-75374795 | Msa0928950:CDS | 30.0% | |
| CTTGTGGCATATAATGAAAA+AGG | - | chr6_2:75374982-75375001 | Msa0928950:CDS | 30.0% | |
| ! | CAAAATACTTTTGCATGATG+CGG | - | chr6_2:75375045-75375064 | Msa0928950:CDS | 30.0% |
| TTTGAGCATAAGTGATTTCA+TGG | - | chr6_2:75375078-75375097 | Msa0928950:CDS | 30.0% | |
| ! | CATGATAATGAATGGTTGAA+AGG | - | chr6_2:75375136-75375155 | Msa0928950:CDS | 30.0% |
| !!! | AGTATGAACGCATTTTTTGA+TGG | - | chr6_2:75375244-75375263 | Msa0928950:CDS | 30.0% |
| CTTGGCAATATATAACAAGA+GGG | + | chr6_2:75375703-75375722 | None:intergenic | 30.0% | |
| TCTTGGCAATATATAACAAG+AGG | + | chr6_2:75375704-75375723 | None:intergenic | 30.0% | |
| ! | CTTGTTATATATTGCCAAGA+TGG | - | chr6_2:75375704-75375723 | Msa0928950:CDS | 30.0% |
| CTTGAACTGGATGCTAAAAT+AGG | + | chr6_2:75373823-75373842 | None:intergenic | 35.0% | |
| CTTACTATTGTCTCTTGAAC+TGG | + | chr6_2:75373836-75373855 | None:intergenic | 35.0% | |
| AGTACAAAAAAGGGAGATGA+TGG | - | chr6_2:75374152-75374171 | Msa0928950:CDS | 35.0% | |
| ! | TGTGTTTTCATGCTAGGATT+TGG | + | chr6_2:75374248-75374267 | None:intergenic | 35.0% |
| ! | TTACAGTGTGTTTTCATGCT+AGG | + | chr6_2:75374254-75374273 | None:intergenic | 35.0% |
| TAGCATGAAAACACACTGTA+AGG | - | chr6_2:75374253-75374272 | Msa0928950:CDS | 35.0% | |
| AATGTATGTGTGTCTTCAGA+TGG | - | chr6_2:75374284-75374303 | Msa0928950:CDS | 35.0% | |
| CCCTAGTATAAAAAGGAGAT+TGG | - | chr6_2:75374400-75374419 | Msa0928950:CDS | 35.0% | |
| TACTTACATTAATCCCAGCT+TGG | + | chr6_2:75374436-75374455 | None:intergenic | 35.0% | |
| GAAACTACATTGACAAAGTG+AGG | - | chr6_2:75374525-75374544 | Msa0928950:CDS | 35.0% | |
| TTTCTTGGTTGTTCACTACT+TGG | - | chr6_2:75374852-75374871 | Msa0928950:CDS | 35.0% | |
| ! | GAGAGTCTACTCAATTTTTC+TGG | + | chr6_2:75375010-75375029 | None:intergenic | 35.0% |
| TAAGTGATTTCATGGAGAAG+TGG | - | chr6_2:75375086-75375105 | Msa0928950:CDS | 35.0% | |
| AAGTGATTTCATGGAGAAGT+GGG | - | chr6_2:75375087-75375106 | Msa0928950:CDS | 35.0% | |
| ! | TGTATGTGAGAGACACATTT+TGG | - | chr6_2:75375191-75375210 | Msa0928950:CDS | 35.0% |
| ! | GTATGTGAGAGACACATTTT+GGG | - | chr6_2:75375192-75375211 | Msa0928950:CDS | 35.0% |
| ! | CAAAGAGTTTCAAGTAGAAG+TGG | - | chr6_2:75375444-75375463 | Msa0928950:CDS | 35.0% |
| ! | TCATGCTTTCTTTGAGAGAA+TGG | - | chr6_2:75375483-75375502 | Msa0928950:CDS | 35.0% |
| GTTATATATTGCCAAGATGG+AGG | - | chr6_2:75375707-75375726 | Msa0928950:CDS | 35.0% | |
| TTAATATCCTTCCTCCATCT+TGG | + | chr6_2:75375721-75375740 | None:intergenic | 35.0% | |
| !!! | AGTGGTTTTGATCAATTAGC+CGG | - | chr6_2:75375763-75375782 | Msa0928950:CDS | 35.0% |
| TGAAGAAGCAAATCCGTAAA+AGG | + | chr6_2:75375827-75375846 | None:intergenic | 35.0% | |
| !! | AGTTTTTCAGAGATCACTGA+AGG | - | chr6_2:75375925-75375944 | Msa0928950:intron | 35.0% |
| ! | TTAGAAGCCTTCCTTTTTGA+AGG | + | chr6_2:75376021-75376040 | None:intergenic | 35.0% |
| ATTGTGAAAAAGAAGCTTGC+TGG | - | chr6_2:75376051-75376070 | Msa0928950:CDS | 35.0% | |
| CACTTATCAAAGTCAAGAAG+AGG | - | chr6_2:75376107-75376126 | Msa0928950:CDS | 35.0% | |
| GTTCAACAACACAAACTCAC+CGG | - | chr6_2:75373691-75373710 | Msa0928950:CDS | 40.0% | |
| GACGACAACGAGTTTGAAAA+CGG | + | chr6_2:75373733-75373752 | None:intergenic | 40.0% | |
| GTAGCAATGCTGATAAACAG+AGG | + | chr6_2:75373767-75373786 | None:intergenic | 40.0% | |
| GAAGATGATGAACCTAAGGT+TGG | - | chr6_2:75374047-75374066 | Msa0928950:CDS | 40.0% | |
| TACTCACATAGCTTCTTGCA+CGG | + | chr6_2:75374205-75374224 | None:intergenic | 40.0% | |
| TCTATGGTTGTTGAAGCAAG+TGG | - | chr6_2:75374467-75374486 | Msa0928950:CDS | 40.0% | |
| ! | CATCTTTTTCCCCGAATGTA+AGG | + | chr6_2:75374502-75374521 | None:intergenic | 40.0% |
| ACTACATTGACAAAGTGAGG+CGG | - | chr6_2:75374528-75374547 | Msa0928950:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | - | chr6_2:75374692-75374711 | Msa0928950:CDS | 40.0% |
| ! | TGTTAAGTAAGTGGTGTCGA+AGG | + | chr6_2:75374729-75374748 | None:intergenic | 40.0% |
| ! | ATGCCTTTTGCTCCTTTTGT+TGG | - | chr6_2:75374761-75374780 | Msa0928950:CDS | 40.0% |
| ACTCCAACAAAAGGAGCAAA+AGG | + | chr6_2:75374767-75374786 | None:intergenic | 40.0% | |
| AGTATCCTCCTTCGACAATA+GGG | + | chr6_2:75374825-75374844 | None:intergenic | 40.0% | |
| TAGTATCCTCCTTCGACAAT+AGG | + | chr6_2:75374826-75374845 | None:intergenic | 40.0% | |
| ACTTGGTTAGAATGTATGCG+TGG | - | chr6_2:75374869-75374888 | Msa0928950:CDS | 40.0% | |
| CTTGGTTAGAATGTATGCGT+GGG | - | chr6_2:75374870-75374889 | Msa0928950:CDS | 40.0% | |
| TGGTCAGTAATTATGGCTTG+TGG | + | chr6_2:75374902-75374921 | None:intergenic | 40.0% | |
| ACAAGCCATAATTACTGACC+AGG | - | chr6_2:75374901-75374920 | Msa0928950:CDS | 40.0% | |
| TCCATCCTGGTCAGTAATTA+TGG | + | chr6_2:75374909-75374928 | None:intergenic | 40.0% | |
| AGCAATGAAGAATGCAGTTG+AGG | - | chr6_2:75374928-75374947 | Msa0928950:CDS | 40.0% | |
| AATGTGTCTCTCACATACAC+AGG | + | chr6_2:75375190-75375209 | None:intergenic | 40.0% | |
| ! | TGCTTTCTTTGAGAGAATGG+AGG | - | chr6_2:75375486-75375505 | Msa0928950:CDS | 40.0% |
| CTGTGAGCTTAAGAACACAA+AGG | + | chr6_2:75375663-75375682 | None:intergenic | 40.0% | |
| TATATTGCCAAGATGGAGGA+AGG | - | chr6_2:75375711-75375730 | Msa0928950:CDS | 40.0% | |
| !! | AAGAAGCTTGCTGGAAAGAA+AGG | - | chr6_2:75376060-75376079 | Msa0928950:CDS | 40.0% |
| !!! | CACGGCACACGTTTTGATTT+TGG | - | chr6_2:75373618-75373637 | Msa0928950:CDS | 45.0% |
| TTGAAAACGGCGGTGAATGT+TGG | + | chr6_2:75373720-75373739 | None:intergenic | 45.0% | |
| GACAACGAGTTTGAAAACGG+CGG | + | chr6_2:75373730-75373749 | None:intergenic | 45.0% | |
| TTGGAGGTTAATGACCAAGC+TGG | - | chr6_2:75374419-75374438 | Msa0928950:CDS | 45.0% | |
| TGGAGGTTAATGACCAAGCT+GGG | - | chr6_2:75374420-75374439 | Msa0928950:CDS | 45.0% | |
| CATGGTCAGTCAGTTCTGTT+AGG | - | chr6_2:75374794-75374813 | Msa0928950:CDS | 45.0% | |
| GCCATAATTACTGACCAGGA+TGG | - | chr6_2:75374905-75374924 | Msa0928950:CDS | 45.0% | |
| CATTCTTCATTGCTCCATCC+TGG | + | chr6_2:75374922-75374941 | None:intergenic | 45.0% | |
| TGTTTGATGAGCGTCATCGT+TGG | - | chr6_2:75375161-75375180 | Msa0928950:CDS | 45.0% | |
| GTTTGATGAGCGTCATCGTT+GGG | - | chr6_2:75375162-75375181 | Msa0928950:CDS | 45.0% | |
| ACGCTGCAACTCTTCATTTC+CGG | + | chr6_2:75375785-75375804 | None:intergenic | 45.0% | |
| ! | AAAGCCTGCGATGCCTTTTA+CGG | - | chr6_2:75375811-75375830 | Msa0928950:intron | 45.0% |
| !! | AAATCCGTAAAAGGCATCGC+AGG | + | chr6_2:75375818-75375837 | None:intergenic | 45.0% |
| CTGTAGCGACTCGAAGTAAA+GGG | - | chr6_2:75375989-75376008 | Msa0928950:CDS | 45.0% | |
| !! | GAAGCCTTCCTTTTTGAAGG+AGG | + | chr6_2:75376018-75376037 | None:intergenic | 45.0% |
| TTTGGGCAGATGCGAGATGT+AGG | - | chr6_2:75374672-75374691 | Msa0928950:CDS | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | - | chr6_2:75374673-75374692 | Msa0928950:CDS | 50.0% | |
| TATGCCACAAGCACCATCGA+TGG | + | chr6_2:75374973-75374992 | None:intergenic | 50.0% | |
| ! | GTGAGAGACACATTTTGGGC+TGG | - | chr6_2:75375196-75375215 | Msa0928950:CDS | 50.0% |
| CCTTTACTTCGAGTCGCTAC+AGG | + | chr6_2:75375991-75376010 | None:intergenic | 50.0% | |
| CCTGTAGCGACTCGAAGTAA+AGG | - | chr6_2:75375988-75376007 | Msa0928950:CDS | 50.0% | |
| !! | AAGGGCGTCCTCCTTCAAAA+AGG | - | chr6_2:75376007-75376026 | Msa0928950:CDS | 50.0% |
| GCGTCCTCCTTCAAAAAGGA+AGG | - | chr6_2:75376011-75376030 | Msa0928950:CDS | 50.0% | |
| !! | CGGCGGTGAATGTTGGTAAC+CGG | + | chr6_2:75373713-75373732 | None:intergenic | 55.0% |
| AAAGTGAGGCGGCTTCGACT+TGG | - | chr6_2:75374539-75374558 | Msa0928950:CDS | 55.0% | |
| AAGTGAGGCGGCTTCGACTT+GGG | - | chr6_2:75374540-75374559 | Msa0928950:CDS | 55.0% | |
| AGGTTGCGCCCTATTGTCGA+AGG | - | chr6_2:75374814-75374833 | Msa0928950:CDS | 55.0% | |
| TTGCGCCCTATTGTCGAAGG+AGG | - | chr6_2:75374817-75374836 | Msa0928950:CDS | 55.0% | |
| ATGGCGAGCTTTCGGGAAGA+CGG | + | chr6_2:75374954-75374973 | None:intergenic | 55.0% | |
| ACCATCGATGGCGAGCTTTC+GGG | + | chr6_2:75374961-75374980 | None:intergenic | 55.0% | |
| CACCATCGATGGCGAGCTTT+CGG | + | chr6_2:75374962-75374981 | None:intergenic | 55.0% | |
| TCCCGAAAGCTCGCCATCGA+TGG | - | chr6_2:75374957-75374976 | Msa0928950:CDS | 60.0% | |
| CTCGCCATCGATGGTGCTTG+TGG | - | chr6_2:75374966-75374985 | Msa0928950:CDS | 60.0% | |
| !! | AGGCGGCTTCGACTTGGGAC+AGG | - | chr6_2:75374545-75374564 | Msa0928950:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 75373604 | 75376173 | 75373604 | ID=Msa0928950;Name=Msa0928950 |
| chr6_2 | mRNA | 75373604 | 75376173 | 75373604 | ID=Msa0928950-mRNA-1;Parent=Msa0928950;Name=Msa0928950-mRNA-1;_AED=0.25;_eAED=0.32;_QI=0|0|0|0.5|1|1|2|0|819 |
| chr6_2 | exon | 75375927 | 75376173 | 75375927 | ID=Msa0928950-mRNA-1:exon:12823;Parent=Msa0928950-mRNA-1 |
| chr6_2 | exon | 75373604 | 75375816 | 75373604 | ID=Msa0928950-mRNA-1:exon:12822;Parent=Msa0928950-mRNA-1 |
| chr6_2 | CDS | 75375927 | 75376173 | 75375927 | ID=Msa0928950-mRNA-1:cds;Parent=Msa0928950-mRNA-1 |
| chr6_2 | CDS | 75373604 | 75375816 | 75373604 | ID=Msa0928950-mRNA-1:cds;Parent=Msa0928950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
