AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0932860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932860 MtrunA17_Chr6g0449691 98.496 266 4 0 189 454 254 519 0.0 561
Msa0932860 MtrunA17_Chr6g0449691 95.855 193 3 1 1 188 1 193 5.28e-126 375
Msa0932860 MtrunA17_Chr6g0487231 28.972 321 152 9 32 285 28 339 4.79e-26 108
Msa0932860 MtrunA17_Chr2g0299991 49.020 102 46 2 193 288 246 347 1.99e-24 103
Msa0932860 MtrunA17_Chr2g0299991 33.750 160 92 5 32 188 29 177 1.36e-13 72.0
Msa0932860 MtrunA17_Chr4g0070851 45.794 107 52 1 195 295 246 352 9.87e-23 99.0
Msa0932860 MtrunA17_Chr4g0070851 42.708 96 51 3 94 188 85 177 4.63e-12 67.4
Msa0932860 MtrunA17_Chr4g0000481 27.719 285 137 11 78 298 83 362 2.56e-15 77.4
Msa0932860 MtrunA17_Chr3g0115171 41.573 89 50 2 189 277 452 538 4.09e-12 68.2
Msa0932860 MtrunA17_Chr3g0130151 36.364 99 62 1 195 293 421 518 1.24e-11 67.0
Msa0932860 MtrunA17_Chr4g0051191 40.909 88 50 1 190 277 334 419 3.46e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0932860 AT5G40440.5 71.321 265 76 0 189 453 171 435 4.17e-141 411
Msa0932860 AT5G40440.5 85.455 110 16 0 79 188 1 110 3.82e-60 203
Msa0932860 AT5G40440.6 71.321 265 76 0 189 453 235 499 1.32e-140 412
Msa0932860 AT5G40440.6 81.646 158 25 1 35 188 17 174 4.28e-85 270
Msa0932860 AT5G40440.3 71.321 265 76 0 189 453 235 499 1.32e-140 412
Msa0932860 AT5G40440.3 81.646 158 25 1 35 188 17 174 4.28e-85 270
Msa0932860 AT5G40440.2 71.321 265 76 0 189 453 235 499 1.32e-140 412
Msa0932860 AT5G40440.2 81.646 158 25 1 35 188 17 174 4.28e-85 270
Msa0932860 AT5G40440.4 71.321 265 76 0 189 453 253 517 1.48e-140 413
Msa0932860 AT5G40440.4 80.729 192 33 1 1 188 1 192 8.16e-106 324
Msa0932860 AT5G40440.1 71.321 265 76 0 189 453 253 517 1.48e-140 413
Msa0932860 AT5G40440.1 80.729 192 33 1 1 188 1 192 8.16e-106 324
Msa0932860 AT5G56580.1 43.220 118 61 1 189 300 239 356 2.58e-25 107
Msa0932860 AT5G56580.1 31.507 146 90 4 49 187 35 177 1.96e-13 72.0
Msa0932860 AT4G29810.2 37.692 130 67 2 189 308 247 372 7.46e-22 97.1
Msa0932860 AT4G29810.2 38.393 112 65 3 78 188 78 186 1.55e-13 72.4
Msa0932860 AT4G29810.1 37.405 131 68 2 188 308 237 363 8.12e-22 97.1
Msa0932860 AT4G29810.1 38.393 112 65 3 78 188 69 177 1.37e-13 72.4
Msa0932860 AT4G26070.4 43.396 106 54 1 189 288 235 340 8.43e-21 94.0
Msa0932860 AT4G26070.5 43.396 106 54 1 189 288 223 328 9.67e-21 93.6
Msa0932860 AT4G26070.2 43.396 106 54 1 189 288 236 341 1.73e-20 92.8
Msa0932860 AT4G26070.2 35.714 112 68 3 78 188 67 175 4.95e-11 64.3
Msa0932860 AT4G26070.3 43.396 106 54 1 189 288 236 341 1.73e-20 92.8
Msa0932860 AT4G26070.3 35.714 112 68 3 78 188 67 175 4.95e-11 64.3
Msa0932860 AT4G29810.3 43.820 89 44 1 189 271 247 335 8.56e-16 79.0
Msa0932860 AT4G29810.3 38.393 112 65 3 78 188 78 186 1.66e-13 72.0
Msa0932860 AT4G08480.1 33.103 145 83 4 133 277 627 757 2.03e-12 70.1
Msa0932860 AT1G54960.1 34.951 103 65 1 195 295 250 352 4.63e-12 68.6
Msa0932860 AT1G54960.2 34.951 103 65 1 195 295 250 352 4.63e-12 68.6
Msa0932860 AT4G08500.1 37.500 96 58 2 182 277 496 589 2.76e-11 66.2
Msa0932860 AT4G26070.1 35.714 112 68 3 78 188 67 175 3.50e-11 64.7
Msa0932860 AT1G51660.1 40.449 89 48 4 197 282 255 341 4.68e-11 64.7
Msa0932860 AT3G21220.2 42.857 84 43 3 197 277 246 327 8.69e-11 63.5
Msa0932860 AT3G21220.1 42.857 84 43 3 197 277 246 327 8.69e-11 63.5

Find 90 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAATGATGTAACATTAT+TGG 0.173786 6_3:+1148008 None:intergenic
ACCATGATTACCATGTATTT+TGG 0.176512 6_3:+1147917 None:intergenic
GTTGAATCAAAATAGCTTAA+TGG 0.187591 6_3:+1156720 None:intergenic
AGAGGGCTTACCAAACTTTA+AGG 0.214570 6_3:-1148146 Msa0932860:CDS
CCTTTATTTGATGCTGAAAA+TGG 0.218758 6_3:-1156660 Msa0932860:CDS
ATTCTTATCCGGCTGATATT+TGG 0.219665 6_3:-1150407 Msa0932860:CDS
CTATGGTGTAACATCCAATT+TGG 0.271387 6_3:+1148053 None:intergenic
TTGAATCAAAATAGCTTAAT+GGG 0.275012 6_3:+1156721 None:intergenic
TGAAACATGGATGATAAAAT+AGG 0.289327 6_3:+1151030 None:intergenic
GTATAGTTCTTGTTTAACTA+TGG 0.293446 6_3:+1148036 None:intergenic
ATTCCAAGATCCTTAAAGTT+TGG 0.307259 6_3:+1148136 None:intergenic
GTGGAACCAACTAGCCAAAT+TGG 0.307286 6_3:-1148067 Msa0932860:CDS
GTCTCGGGATCCTTCATAAT+TGG 0.308570 6_3:-1148205 Msa0932860:CDS
TTACCAAACTTTAAGGATCT+TGG 0.309190 6_3:-1148139 Msa0932860:CDS
TCCTGTCAATCTTATGTTGC+AGG 0.324307 6_3:-1150322 Msa0932860:intron
GGACCTTCATTAGCTGTATA+CGG 0.341236 6_3:+1150342 None:intergenic
AGAGTTGTAAAGACATTGTT+AGG 0.343375 6_3:+1148337 None:intergenic
CTTACAGTGTAAGAATCATT+AGG 0.347722 6_3:+1156612 None:intergenic
TCTGCAGTTGGCCTATTATC+TGG 0.348877 6_3:+1149854 None:intergenic
GTGAAGACGGAGTTGCAATA+AGG 0.354928 6_3:-1148228 Msa0932860:CDS
ATGCTAATCTGTCCAGAATC+TGG 0.355490 6_3:+1151120 None:intergenic
TGCATACTTTGCAGTTTCTC+TGG 0.360703 6_3:-1148376 Msa0932860:intron
GGTCTTGCACTTCTTGAGTC+TGG 0.369496 6_3:-1150378 Msa0932860:CDS
TCAACAAAAGAGCAGAATTC+AGG 0.369915 6_3:+1149896 None:intergenic
CATTATTACTTGCTATTTGA+CGG 0.372821 6_3:-1148881 Msa0932860:CDS
GAGGGTCTTGTAGAATTTCA+TGG 0.376103 6_3:-1151156 Msa0932860:CDS
TACAAAAGGATCCAGATAAT+AGG 0.377134 6_3:-1149865 Msa0932860:CDS
CCGGCTGATATTTGGAGCCT+TGG 0.390139 6_3:-1150399 Msa0932860:CDS
TGGACAGATTAGCATAGCTT+TGG 0.390889 6_3:-1151112 Msa0932860:CDS
TAACATCCAATTTGGCTAGT+TGG 0.396643 6_3:+1148061 None:intergenic
AAATGAAAGTTATTCTTATC+CGG 0.400698 6_3:-1150418 Msa0932860:CDS
TACACAAAGAATGAAAGATT+TGG 0.402123 6_3:-1149086 Msa0932860:CDS
TGATATTTCTAGTAAAAGAA+TGG 0.406319 6_3:-1148113 Msa0932860:CDS
ATGCGAAGCACCTTGTTATG+AGG 0.423915 6_3:-1151175 Msa0932860:CDS
TGTTGATGCTTGCTTACAAA+AGG 0.432718 6_3:-1149879 Msa0932860:CDS
TAGCATAGCTTTGGAGTACA+TGG 0.437395 6_3:-1151103 Msa0932860:CDS
ACCAAAATACATGGTAATCA+TGG 0.437650 6_3:-1147918 None:intergenic
GCACTTCTTGAGTCTGGTAC+TGG 0.440001 6_3:-1150372 Msa0932860:CDS
GGTAATCAGTTTCTCATATG+TGG 0.442603 6_3:-1148184 Msa0932860:CDS
TCTCTCACCTGCTCTGCAGT+TGG 0.448207 6_3:+1149842 None:intergenic
AGTATCCGAACAACTTTAAT+CGG 0.448790 6_3:-1148310 Msa0932860:CDS
AAATCCAGGTAAATCTATCT+TGG 0.454497 6_3:+1149129 None:intergenic
TTGACGGACCTGACGATTCG+TGG 0.455508 6_3:-1148865 Msa0932860:CDS
CGGAGTTGCAATAAGGGTCT+CGG 0.458604 6_3:-1148221 Msa0932860:CDS
TGAAGACGGAGTTGCAATAA+GGG 0.464521 6_3:-1148227 Msa0932860:CDS
AATCGCCGATTAAAGTTGTT+CGG 0.470976 6_3:+1148305 None:intergenic
TAATAGGCCAACTGCAGAGC+AGG 0.472199 6_3:-1149849 Msa0932860:intron
AGTCTCGTACTTTGTAATGA+AGG 0.478894 6_3:+1149153 None:intergenic
GATATTTCTAGTAAAAGAAT+GGG 0.480431 6_3:-1148112 Msa0932860:CDS
TTACAGTGTAAGAATCATTA+GGG 0.480572 6_3:+1156613 None:intergenic
CTATGCATATACCAACTCAT+AGG 0.491622 6_3:-1156291 Msa0932860:CDS
AAATCTTTCATTCTTTGTGT+AGG 0.494204 6_3:+1149088 None:intergenic
GTATGTTGCCACGAATCGTC+AGG 0.498801 6_3:+1148857 None:intergenic
CGATTGGCCACCGGAAAAGT+TGG 0.508658 6_3:-1148287 Msa0932860:CDS
GTCTCGTACTTTGTAATGAA+GGG 0.510155 6_3:+1149154 None:intergenic
TTTAATCGGCGATTGGCCAC+CGG 0.515956 6_3:-1148296 Msa0932860:CDS
ATGGATGATAAAATAGGTTC+AGG 0.517571 6_3:+1151036 None:intergenic
ACCTGCAACATAAGATTGAC+AGG 0.517701 6_3:+1150321 None:intergenic
AATTTGTTGAGTAGATCATA+TGG 0.518574 6_3:-1156469 Msa0932860:CDS
AAAACACTGCGAACAAATCC+AGG 0.528531 6_3:+1149115 None:intergenic
GGAGTTGCAATAAGGGTCTC+GGG 0.531397 6_3:-1148220 Msa0932860:CDS
ACGATTCGTGGCAACATACA+AGG 0.533166 6_3:-1148853 Msa0932860:CDS
AAACTGATTACCAATTATGA+AGG 0.539525 6_3:+1148195 None:intergenic
CAGTTTCTCATATGTGGAGA+TGG 0.540203 6_3:-1148178 Msa0932860:CDS
AGCAGCTGCTTACTGAGATA+AGG 0.543464 6_3:-1151203 Msa0932860:CDS
GAACAACTTTAATCGGCGAT+TGG 0.544908 6_3:-1148303 Msa0932860:CDS
ATTTCATGAACAATTCATAG+TGG 0.552019 6_3:-1148086 Msa0932860:CDS
GTGTATAACATCAATGAACT+TGG 0.561792 6_3:-1156445 Msa0932860:CDS
TTCCCGTATACAGCTAATGA+AGG 0.562116 6_3:-1150345 Msa0932860:CDS
GACCTTCATTAGCTGTATAC+GGG 0.564018 6_3:+1150343 None:intergenic
TGTCGAGCACACGGTGAAGA+CGG 0.566317 6_3:-1148241 Msa0932860:CDS
TGCGAAGCACCTTGTTATGA+GGG 0.572805 6_3:-1151174 Msa0932860:CDS
GAAGATCAATATCTTTGAGA+AGG 0.573457 6_3:-1156254 Msa0932860:intron
CCAAGGCTCCAAATATCAGC+CGG 0.575751 6_3:+1150399 None:intergenic
AAAGCAATAATCCTATGAGT+TGG 0.575925 6_3:+1156280 None:intergenic
ACCGGAAAAGTTGGTGCATG+TGG 0.581740 6_3:-1148278 Msa0932860:CDS
AAAACAATGGAAAATGTAAG+GGG 0.583944 6_3:+1156772 None:intergenic
TTCTCTGGTAAACAACATGT+TGG 0.600287 6_3:-1148361 Msa0932860:CDS
TGGAGATGGTGTTCAAGTAG+AGG 0.601935 6_3:-1148164 Msa0932860:CDS
GGAGATGGTGTTCAAGTAGA+GGG 0.608856 6_3:-1148163 Msa0932860:CDS
AAGCTGCAATGTCGAGCACA+CGG 0.610666 6_3:-1148250 Msa0932860:CDS
ACGTAGGAGCTTATGAAACA+TGG 0.615884 6_3:+1151017 None:intergenic
TCTACAAGACCCTCATAACA+AGG 0.617915 6_3:+1151165 None:intergenic
ACTGCCAAGATAGATTTACC+TGG 0.623668 6_3:-1149133 Msa0932860:CDS
TCTCGTACTTTGTAATGAAG+GGG 0.639997 6_3:+1149155 None:intergenic
ATAGCTTTGGAGTACATGGA+TGG 0.650066 6_3:-1151099 Msa0932860:CDS
ACTCAAGAAGTGCAAGACCA+AGG 0.667452 6_3:+1150382 None:intergenic
GCTTTGGAGTACATGGATGG+AGG 0.667465 6_3:-1151096 Msa0932860:CDS
AAACAATGGAAAATGTAAGG+GGG 0.670394 6_3:+1156773 None:intergenic
GTGATGGTGATGGATCATCA+AGG 0.672951 6_3:+1149939 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGATATTAATTGTATTTAT+AGG - chr6_3:1151929-1151948 Msa0932860:intron 10.0%
!! AGATATTAATTGTATTTATA+GGG - chr6_3:1151930-1151949 Msa0932860:intron 10.0%
!!! TTTTTTTATAATCTTTTTGA+AGG - chr6_3:1153797-1153816 Msa0932860:intron 10.0%
!!! TTTTTTATAATCTTTTTGAA+GGG - chr6_3:1153798-1153817 Msa0932860:intron 10.0%
!!! TATTCAATCAATTTTTATAT+TGG + chr6_3:1154657-1154676 None:intergenic 10.0%
!! ACAACAAATTATACAAAAAT+TGG + chr6_3:1148148-1148167 None:intergenic 15.0%
!!! TGCTATTATTTGATTTAATT+CGG - chr6_3:1148485-1148504 Msa0932860:intron 15.0%
!! AAATTTAGAGATTAATGAAT+TGG - chr6_3:1148661-1148680 Msa0932860:intron 15.0%
!!! TTTTCTTAATCTCTATAAAA+GGG + chr6_3:1149010-1149029 None:intergenic 15.0%
!!! ATTTTCTTAATCTCTATAAA+AGG + chr6_3:1149011-1149030 None:intergenic 15.0%
!!! GCTATTTTTCAATTAATTTT+TGG + chr6_3:1150366-1150385 None:intergenic 15.0%
!! TATATTGCAATTTCAATAAT+TGG + chr6_3:1150499-1150518 None:intergenic 15.0%
!!! TTTTCTTAATCTCTATAAAA+GGG + chr6_3:1149010-1149029 None:intergenic 15.0%
!!! ATTTTCTTAATCTCTATAAA+AGG + chr6_3:1149011-1149030 None:intergenic 15.0%
!!! GGTTTTAAAATATTATGATT+TGG + chr6_3:1152994-1153013 None:intergenic 15.0%
!! TCTCATTTATCTTAAATTTA+TGG + chr6_3:1154533-1154552 None:intergenic 15.0%
!!! ATAATTTTACTAGCTTTTTA+TGG - chr6_3:1154741-1154760 Msa0932860:intron 15.0%
!! TCTAATCACATAAATATTTA+TGG + chr6_3:1155039-1155058 None:intergenic 15.0%
!!! AATAAACAGTTTTTATCTAA+TGG + chr6_3:1155489-1155508 None:intergenic 15.0%
!! AAATAATGATGTAACATTAT+TGG + chr6_3:1156703-1156722 None:intergenic 15.0%
!! AAAAACAATGGAAAATGTAA+GGG + chr6_3:1147940-1147959 None:intergenic 20.0%
!! AAAAAACAATGGAAAATGTA+AGG + chr6_3:1147941-1147960 None:intergenic 20.0%
!! AATTTCAATCGAAAAAACAA+TGG + chr6_3:1147952-1147971 None:intergenic 20.0%
!! TTGAATCAAAATAGCTTAAT+GGG + chr6_3:1147990-1148009 None:intergenic 20.0%
!! AATGAAAAAACATATAGATG+TGG - chr6_3:1148332-1148351 Msa0932860:CDS 20.0%
!!! CAATTGATAGTGTAATAAAA+TGG - chr6_3:1148788-1148807 Msa0932860:intron 20.0%
!! TCAATTAAAATTGATGTTCT+AGG - chr6_3:1148850-1148869 Msa0932860:CDS 20.0%
!! TCACTTGATCTAATAATTAA+GGG + chr6_3:1149040-1149059 None:intergenic 20.0%
!! TATGATCCAAAATATCATAT+GGG + chr6_3:1149070-1149089 None:intergenic 20.0%
!! TTATGATCCAAAATATCATA+TGG + chr6_3:1149071-1149090 None:intergenic 20.0%
!!! CAATTGATAGTGTAATAAAA+TGG - chr6_3:1148788-1148807 Msa0932860:intron 20.0%
!! TCAATTAAAATTGATGTTCT+AGG - chr6_3:1148850-1148869 Msa0932860:CDS 20.0%
!! TCACTTGATCTAATAATTAA+GGG + chr6_3:1149040-1149059 None:intergenic 20.0%
!! TATGATCCAAAATATCATAT+GGG + chr6_3:1149070-1149089 None:intergenic 20.0%
!! TTATGATCCAAAATATCATA+TGG + chr6_3:1149071-1149090 None:intergenic 20.0%
!! TCATAAGTTATTCATATGAT+CGG - chr6_3:1152582-1152601 Msa0932860:intron 20.0%
!! ATAATTTCTAACATTCAAGA+AGG - chr6_3:1152968-1152987 Msa0932860:intron 20.0%
!!! ATCATAATATTTTAAAACCC+TGG - chr6_3:1152995-1153014 Msa0932860:intron 20.0%
!! AAAAGAGGAATATAATACAA+GGG + chr6_3:1153073-1153092 None:intergenic 20.0%
!!! AATTTTATGACAGAACATTA+AGG + chr6_3:1153190-1153209 None:intergenic 20.0%
!! AATTATTCATAATAGCGTTA+AGG - chr6_3:1153206-1153225 Msa0932860:intron 20.0%
!! AATTTACTTGTAAATCTCAA+AGG - chr6_3:1153876-1153895 Msa0932860:intron 20.0%
!! ATTTACTTGTAAATCTCAAA+GGG - chr6_3:1153877-1153896 Msa0932860:intron 20.0%
!!! ATACCAAAATCAGTAATTTT+CGG + chr6_3:1153906-1153925 None:intergenic 20.0%
!! AAATGAAAGTTATTCTTATC+CGG - chr6_3:1154290-1154309 Msa0932860:intron 20.0%
!! GTCACAAATAAAATATACAA+AGG - chr6_3:1154499-1154518 Msa0932860:intron 20.0%
!! AATTGATTGAATATCTGATA+CGG - chr6_3:1154664-1154683 Msa0932860:intron 20.0%
!! AAAGTAAACTCTGATAAAAT+TGG - chr6_3:1155110-1155129 Msa0932860:intron 20.0%
!!! ATATAACTATTTTGACATGT+GGG - chr6_3:1155718-1155737 Msa0932860:intron 20.0%
!!! AATGTTTTACATATCAAGAA+TGG - chr6_3:1156245-1156264 Msa0932860:intron 20.0%
!!! TGATATTTCTAGTAAAAGAA+TGG - chr6_3:1156595-1156614 Msa0932860:intron 20.0%
!!! GATATTTCTAGTAAAAGAAT+GGG - chr6_3:1156596-1156615 Msa0932860:intron 20.0%
!!! AATAGTTTTACCAAAATACA+TGG - chr6_3:1156781-1156800 Msa0932860:five_prime_UTR 20.0%
! AAAACAATGGAAAATGTAAG+GGG + chr6_3:1147939-1147958 None:intergenic 25.0%
! GTTGAATCAAAATAGCTTAA+TGG + chr6_3:1147991-1148010 None:intergenic 25.0%
!!! TATTTTGATTCAACAATGTC+TGG - chr6_3:1147997-1148016 Msa0932860:three_prime_UTR 25.0%
! TTACAGTGTAAGAATCATTA+GGG + chr6_3:1148098-1148117 None:intergenic 25.0%
! GATTATAAGAGAAAGGAAAA+AGG + chr6_3:1148123-1148142 None:intergenic 25.0%
! ATTGGTTGATTATAAGAGAA+AGG + chr6_3:1148130-1148149 None:intergenic 25.0%
!!! AATTTGTTGAGTAGATCATA+TGG - chr6_3:1148239-1148258 Msa0932860:CDS 25.0%
! CATGAAATTCAAATGGAAAT+TGG + chr6_3:1148516-1148535 None:intergenic 25.0%
! ATTTCCATTTGAATTTCATG+TGG - chr6_3:1148516-1148535 Msa0932860:intron 25.0%
! TATACCACATGAAATTCAAA+TGG + chr6_3:1148523-1148542 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr6_3:1148632-1148651 None:intergenic 25.0%
!! AATCTCTAAATTTGTTCAGA+TGG + chr6_3:1148654-1148673 None:intergenic 25.0%
! GTCACTTGATCTAATAATTA+AGG + chr6_3:1149041-1149060 None:intergenic 25.0%
! TGAAGTTAAACTAATGTTGT+TGG - chr6_3:1149130-1149149 Msa0932860:CDS 25.0%
! GACTTTACAATTCATACAAT+GGG + chr6_3:1149231-1149250 None:intergenic 25.0%
! AGACTTTACAATTCATACAA+TGG + chr6_3:1149232-1149251 None:intergenic 25.0%
!!! TTTTGTTGTCCAATAATTTG+TGG + chr6_3:1149454-1149473 None:intergenic 25.0%
! TTGCTTGAATACACAAAATA+TGG + chr6_3:1149549-1149568 None:intergenic 25.0%
! TATATGTTGGTATCTATTTG+TGG + chr6_3:1149878-1149897 None:intergenic 25.0%
! TGGTTATGTTTCTTATATGT+TGG + chr6_3:1149891-1149910 None:intergenic 25.0%
! TGATGAATATCCTAATTATG+TGG + chr6_3:1150077-1150096 None:intergenic 25.0%
! ATTCTCATATCACATTTCAA+TGG + chr6_3:1150154-1150173 None:intergenic 25.0%
!!! ATGTTTGTTTCTGTGAAAAT+GGG + chr6_3:1150192-1150211 None:intergenic 25.0%
!!! TATGTTTGTTTCTGTGAAAA+TGG + chr6_3:1150193-1150212 None:intergenic 25.0%
! CACAATTTCAATTGTTCATT+TGG + chr6_3:1150281-1150300 None:intergenic 25.0%
! TGAACAATTGAAATTGTGAT+AGG - chr6_3:1150283-1150302 Msa0932860:intron 25.0%
! TCATTACATCAAACACATAA+TGG - chr6_3:1150401-1150420 Msa0932860:CDS 25.0%
! CATTACATCAAACACATAAT+GGG - chr6_3:1150402-1150421 Msa0932860:CDS 25.0%
! CACAACAATCAAAGAATTAA+TGG + chr6_3:1150593-1150612 None:intergenic 25.0%
! GTTCTATTATTTGCCAAATT+AGG + chr6_3:1151035-1151054 None:intergenic 25.0%
! TTCGGTGAAAGTAAAATATT+GGG + chr6_3:1151129-1151148 None:intergenic 25.0%
! GTCACTTGATCTAATAATTA+AGG + chr6_3:1149041-1149060 None:intergenic 25.0%
!!! TATTTATAGGGTAGTTTTGT+AGG - chr6_3:1151942-1151961 Msa0932860:intron 25.0%
!!! ATTTATAGGGTAGTTTTGTA+GGG - chr6_3:1151943-1151962 Msa0932860:intron 25.0%
! AATGCATGGTATTATGTATA+AGG + chr6_3:1152227-1152246 None:intergenic 25.0%
! CATACATTAAAACTAGAAAG+AGG + chr6_3:1152250-1152269 None:intergenic 25.0%
! ATCATAATTGAGAGAGAATT+TGG + chr6_3:1152521-1152540 None:intergenic 25.0%
! AAGAAAATACCACATGTAAA+TGG + chr6_3:1152647-1152666 None:intergenic 25.0%
! TTGTACTAAATAGTATATCG+CGG + chr6_3:1152762-1152781 None:intergenic 25.0%
! GTACAAAGTGTGTTAAATAT+AGG - chr6_3:1152776-1152795 Msa0932860:intron 25.0%
! TTGTTTATAGTTAGAAACGA+AGG + chr6_3:1153048-1153067 None:intergenic 25.0%
! GAAAAGAGGAATATAATACA+AGG + chr6_3:1153074-1153093 None:intergenic 25.0%
!! ATTATATTCCTCTTTTCTGT+TGG - chr6_3:1153077-1153096 Msa0932860:intron 25.0%
! AACTTCATAACTTCAAAACA+CGG + chr6_3:1153347-1153366 None:intergenic 25.0%
! AATAGAGTCACACAAATAAA+GGG + chr6_3:1153376-1153395 None:intergenic 25.0%
! TGAAACATGGATGATAAAAT+AGG + chr6_3:1153681-1153700 None:intergenic 25.0%
! AGATTTACAAGTAAATTAGC+AGG + chr6_3:1153873-1153892 None:intergenic 25.0%
! TTTACTTGTAAATCTCAAAG+GGG - chr6_3:1153878-1153897 Msa0932860:intron 25.0%
! AAAGTAGAATCTGAACAAAT+CGG + chr6_3:1154186-1154205 None:intergenic 25.0%
! GATGCATATGTAAAAATGTT+TGG + chr6_3:1154966-1154985 None:intergenic 25.0%
!! ATTTTTACATATGCATCCAA+TGG - chr6_3:1154969-1154988 Msa0932860:intron 25.0%
!! TCTAATACTACTTTGTTATG+CGG - chr6_3:1154998-1155017 Msa0932860:intron 25.0%
!! GACCAAAAGTTTACATTTTA+CGG + chr6_3:1155189-1155208 None:intergenic 25.0%
! TGGTCAATATTATTCGAATT+TGG - chr6_3:1155204-1155223 Msa0932860:intron 25.0%
! ATGTAAAATGTGTGTAATGT+TGG + chr6_3:1155444-1155463 None:intergenic 25.0%
! AAATCTTTCATTCTTTGTGT+AGG + chr6_3:1155623-1155642 None:intergenic 25.0%
! TACACAAAGAATGAAAGATT+TGG - chr6_3:1155622-1155641 Msa0932860:intron 25.0%
!!! GATATAACTATTTTGACATG+TGG - chr6_3:1155717-1155736 Msa0932860:intron 25.0%
!!! CATTATTACTTGCTATTTGA+CGG - chr6_3:1155827-1155846 Msa0932860:intron 25.0%
!! ATAACGAAAACTCAATTTTC+AGG - chr6_3:1155885-1155904 Msa0932860:intron 25.0%
! ACATCATAGTGTAATTTGAT+TGG + chr6_3:1156097-1156116 None:intergenic 25.0%
! AATTTCAGAAAAAATGCTCA+TGG + chr6_3:1156272-1156291 None:intergenic 25.0%
! AAACTGATTACCAATTATGA+AGG + chr6_3:1156516-1156535 None:intergenic 25.0%
! ATTTCATGAACAATTCATAG+TGG - chr6_3:1156622-1156641 Msa0932860:CDS 25.0%
!! GTATAGTTCTTGTTTAACTA+TGG + chr6_3:1156675-1156694 None:intergenic 25.0%
AAACAATGGAAAATGTAAGG+GGG + chr6_3:1147938-1147957 None:intergenic 30.0%
! CCATTTTCAGCATCAAATAA+AGG + chr6_3:1148051-1148070 None:intergenic 30.0%
! CCTTTATTTGATGCTGAAAA+TGG - chr6_3:1148048-1148067 Msa0932860:CDS 30.0%
CTTACAGTGTAAGAATCATT+AGG + chr6_3:1148099-1148118 None:intergenic 30.0%
! TCAATTGTGAAGTTTTCAGA+TGG - chr6_3:1148206-1148225 Msa0932860:CDS 30.0%
GTGTATAACATCAATGAACT+TGG - chr6_3:1148263-1148282 Msa0932860:CDS 30.0%
! TCTCATGAGATGAGAATTTT+TGG - chr6_3:1148356-1148375 Msa0932860:CDS 30.0%
!!! ATGAGAATTTTTGGAGCAAT+TGG - chr6_3:1148365-1148384 Msa0932860:CDS 30.0%
AAAGCAATAATCCTATGAGT+TGG + chr6_3:1148431-1148450 None:intergenic 30.0%
! GAAGATCAATATCTTTGAGA+AGG - chr6_3:1148454-1148473 Msa0932860:intron 30.0%
TAATGAATTGGACCGAAATA+CGG - chr6_3:1148673-1148692 Msa0932860:intron 30.0%
TTCTATCGTAAACCGTATTT+CGG + chr6_3:1148688-1148707 None:intergenic 30.0%
!! AGGTCAAGGTTGATTTTAAT+GGG + chr6_3:1149104-1149123 None:intergenic 30.0%
! TTAGTTTAACTTCAACCTTG+AGG + chr6_3:1149124-1149143 None:intergenic 30.0%
ACAATGAAAGTTAACTCTTG+TGG + chr6_3:1149281-1149300 None:intergenic 30.0%
! CAATAATTTGTGGTTGCTTA+GGG + chr6_3:1149444-1149463 None:intergenic 30.0%
! TACATATACTTTTGCCAAGT+TGG + chr6_3:1149477-1149496 None:intergenic 30.0%
TATCAGTCACTTCAAAGTTA+AGG - chr6_3:1149633-1149652 Msa0932860:intron 30.0%
AAGGAAAAAGGAATTATGTG+TGG + chr6_3:1149785-1149804 None:intergenic 30.0%
! ACACATAATTCCTTTTTCCT+TGG - chr6_3:1149784-1149803 Msa0932860:intron 30.0%
! TTTTACAACACTATATGCCA+AGG + chr6_3:1149804-1149823 None:intergenic 30.0%
!! TTTTGACTCTCTTAAAGTGT+TGG - chr6_3:1149912-1149931 Msa0932860:CDS 30.0%
!! TATTTTCACAGAAAAGCACA+AGG - chr6_3:1149975-1149994 Msa0932860:intron 30.0%
AAGATGATTGTTTGAGAAAG+TGG + chr6_3:1150006-1150025 None:intergenic 30.0%
TACTTAAGTGCCACATAATT+AGG - chr6_3:1150064-1150083 Msa0932860:intron 30.0%
AATGTGATATGAGAATTGCA+AGG - chr6_3:1150158-1150177 Msa0932860:intron 30.0%
CAAACATAGAAAAGATCACA+AGG - chr6_3:1150205-1150224 Msa0932860:intron 30.0%
GCAATTTCAATAATTGGTGA+TGG + chr6_3:1150493-1150512 None:intergenic 30.0%
!! TCTGAAATTTTTGCTTGCAT+TGG + chr6_3:1150530-1150549 None:intergenic 30.0%
ATTTGGCAAATAATAGAACC+TGG - chr6_3:1151036-1151055 Msa0932860:CDS 30.0%
! GTTCGGTGAAAGTAAAATAT+TGG + chr6_3:1151130-1151149 None:intergenic 30.0%
! TGATTTCAACATCGAAGTTT+TGG + chr6_3:1151196-1151215 None:intergenic 30.0%
! TCTGAAACAATAGAATCGAT+CGG - chr6_3:1151366-1151385 Msa0932860:intron 30.0%
AATTGTGCAACTCATTACAA+TGG + chr6_3:1151589-1151608 None:intergenic 30.0%
!! TATTTTGGATCATAACAGCT+TGG - chr6_3:1151892-1151911 Msa0932860:intron 30.0%
!!! GTTATCAGGGTTTTAAATAG+TGG - chr6_3:1152015-1152034 Msa0932860:intron 30.0%
ATGGTATTATGTATAAGGTG+CGG + chr6_3:1152222-1152241 None:intergenic 30.0%
AACTGAATTGAGAGATAGTT+GGG + chr6_3:1152299-1152318 None:intergenic 30.0%
TAACTGAATTGAGAGATAGT+TGG + chr6_3:1152300-1152319 None:intergenic 30.0%
ATTACCAGGGTTTCAAATAA+AGG + chr6_3:1152392-1152411 None:intergenic 30.0%
GTGGTTATCAATAATTACCA+GGG + chr6_3:1152405-1152424 None:intergenic 30.0%
TTATGACAACTAAAAGCAAC+AGG + chr6_3:1152568-1152587 None:intergenic 30.0%
GTGTACACTAGATATTTATC+TGG - chr6_3:1152621-1152640 Msa0932860:intron 30.0%
ACATAACATCAAGACAAAAG+AGG + chr6_3:1152684-1152703 None:intergenic 30.0%
GTGTTAAATATAGGCTATGA+TGG - chr6_3:1152785-1152804 Msa0932860:intron 30.0%
TGTTGAATTGCAGAAAATAG+TGG + chr6_3:1152851-1152870 None:intergenic 30.0%
! TATTTTCTGCAATTCAACAC+CGG - chr6_3:1152852-1152871 Msa0932860:intron 30.0%
TATACATTCCAACAGAAAAG+AGG + chr6_3:1153088-1153107 None:intergenic 30.0%
AACAGAATTGAGAGAGAATT+GGG + chr6_3:1153137-1153156 None:intergenic 30.0%
TAACAGAATTGAGAGAGAAT+TGG + chr6_3:1153138-1153157 None:intergenic 30.0%
CAATAGAGTCACACAAATAA+AGG + chr6_3:1153377-1153396 None:intergenic 30.0%
! CTTTATTTGTGTGACTCTAT+TGG - chr6_3:1153375-1153394 Msa0932860:intron 30.0%
! AATTGTTTCATGTTGACTGA+TGG - chr6_3:1153451-1153470 Msa0932860:intron 30.0%
ATGGATGATAAAATAGGTTC+AGG + chr6_3:1153675-1153694 None:intergenic 30.0%
AATATATGTTCCTTACACGT+AGG + chr6_3:1153710-1153729 None:intergenic 30.0%
TACATTTGCAAACAATTCTG+CGG + chr6_3:1154009-1154028 None:intergenic 30.0%
TTCATCTGTGTTATCAATTG+CGG - chr6_3:1154043-1154062 Msa0932860:intron 30.0%
ACTTTCATTTCTAATTCGCT+CGG + chr6_3:1154280-1154299 None:intergenic 30.0%
CAAGTAACACGAAGAAAAAT+CGG + chr6_3:1154418-1154437 None:intergenic 30.0%
TACAAAAGGATCCAGATAAT+AGG - chr6_3:1154843-1154862 Msa0932860:intron 30.0%
! CTAATACTACTTTGTTATGC+GGG - chr6_3:1154999-1155018 Msa0932860:intron 30.0%
TGATTAGAACCAATGAGTTT+AGG - chr6_3:1155051-1155070 Msa0932860:intron 30.0%
! TTTTTGTGACCTAAACTCAT+TGG + chr6_3:1155063-1155082 None:intergenic 30.0%
ACAAGTTTACAGTTCTACAT+TGG - chr6_3:1155158-1155177 Msa0932860:intron 30.0%
! TTTACAGTTCTACATTGGTT+TGG - chr6_3:1155163-1155182 Msa0932860:intron 30.0%
TTGTGTGCTGTCATATATAT+AGG - chr6_3:1155239-1155258 Msa0932860:intron 30.0%
! ACAAAATATTTTGCACTGCA+AGG + chr6_3:1155343-1155362 None:intergenic 30.0%
AAATCCAGGTAAATCTATCT+TGG + chr6_3:1155582-1155601 None:intergenic 30.0%
TATTATGCATCAAACTGAGT+AGG - chr6_3:1156024-1156043 Msa0932860:intron 30.0%
TTAACAATACACACTCTATC+TGG + chr6_3:1156227-1156246 None:intergenic 30.0%
! TAGCATGATCTAAAACTAGA+AGG + chr6_3:1156301-1156320 None:intergenic 30.0%
AGAGTTGTAAAGACATTGTT+AGG + chr6_3:1156374-1156393 None:intergenic 30.0%
AGTATCCGAACAACTTTAAT+CGG - chr6_3:1156398-1156417 Msa0932860:CDS 30.0%
! TTACCAAACTTTAAGGATCT+TGG - chr6_3:1156569-1156588 Msa0932860:intron 30.0%
ATTCCAAGATCCTTAAAGTT+TGG + chr6_3:1156575-1156594 None:intergenic 30.0%
! ATTGTGAAGTTTTCAGATGG+TGG - chr6_3:1148209-1148228 Msa0932860:CDS 35.0%
!! TACAGAAGTGTTCAACTTCA+AGG - chr6_3:1148288-1148307 Msa0932860:CDS 35.0%
!!! ATTTTTGGAGCAATTGGTAG+TGG - chr6_3:1148371-1148390 Msa0932860:intron 35.0%
CTATGCATATACCAACTCAT+AGG - chr6_3:1148417-1148436 Msa0932860:intron 35.0%
! GACTTTTAGACTCTGTAGTA+AGG - chr6_3:1148564-1148583 Msa0932860:intron 35.0%
AGAGTAATGGCTTAAGTCTT+AGG + chr6_3:1148913-1148932 None:intergenic 35.0%
CTATAAAAGGGACCAATGAT+TGG + chr6_3:1148998-1149017 None:intergenic 35.0%
! ACGTGTCCCATATGATATTT+TGG - chr6_3:1149061-1149080 Msa0932860:intron 35.0%
!! TCAAGGTTGATTTTAATGGG+GGG + chr6_3:1149101-1149120 None:intergenic 35.0%
!! GTCAAGGTTGATTTTAATGG+GGG + chr6_3:1149102-1149121 None:intergenic 35.0%
!! GGTCAAGGTTGATTTTAATG+GGG + chr6_3:1149103-1149122 None:intergenic 35.0%
!! GAGGTCAAGGTTGATTTTAA+TGG + chr6_3:1149105-1149124 None:intergenic 35.0%
TAAAATCAACCTTGACCTCA+AGG - chr6_3:1149106-1149125 Msa0932860:CDS 35.0%
! AACTAATGTTGTTGGCTGAT+AGG - chr6_3:1149138-1149157 Msa0932860:CDS 35.0%
ACAATTCATACAATGGGATC+CGG + chr6_3:1149225-1149244 None:intergenic 35.0%
ATGAATTGTAAAGTCTTCCG+AGG - chr6_3:1149236-1149255 Msa0932860:intron 35.0%
! ATCAAGTTGTGAACATTGAG+AGG - chr6_3:1149335-1149354 Msa0932860:intron 35.0%
! CCAATAATTTGTGGTTGCTT+AGG + chr6_3:1149445-1149464 None:intergenic 35.0%
CCTAAGCAACCACAAATTAT+TGG - chr6_3:1149442-1149461 Msa0932860:intron 35.0%
ATTGGACAACAAAACCAACT+TGG - chr6_3:1149460-1149479 Msa0932860:intron 35.0%
GTGTATTCAAGCAAGCATAA+AGG - chr6_3:1149555-1149574 Msa0932860:intron 35.0%
GTGGTGGTTATTTGTTTCAA+TGG + chr6_3:1149602-1149621 None:intergenic 35.0%
ATTGATGGAGTTGCAACAAT+TGG + chr6_3:1149695-1149714 None:intergenic 35.0%
CCTGCACAATTAAGAATTGA+TGG + chr6_3:1149710-1149729 None:intergenic 35.0%
CCATCAATTCTTAATTGTGC+AGG - chr6_3:1149707-1149726 Msa0932860:intron 35.0%
ACACTATATGCCAAGGAAAA+AGG + chr6_3:1149797-1149816 None:intergenic 35.0%
GTAAAATCTAACCAACCAAG+AGG - chr6_3:1149818-1149837 Msa0932860:intron 35.0%
ATGTTGGTATCTATTTGTGG+TGG + chr6_3:1149875-1149894 None:intergenic 35.0%
! CACTTTAAGAGAGTCAAAAG+TGG + chr6_3:1149911-1149930 None:intergenic 35.0%
TGCTTTCACTTAGATCAGAT+TGG + chr6_3:1149944-1149963 None:intergenic 35.0%
TAAACATTCCAGCTGATGTT+AGG + chr6_3:1150123-1150142 None:intergenic 35.0%
ATTATTGAGACTGTGACTGT+GGG + chr6_3:1150247-1150266 None:intergenic 35.0%
AATTATTGAGACTGTGACTG+TGG + chr6_3:1150248-1150267 None:intergenic 35.0%
! ATCCCATTGTTTGAAATGCA+AGG - chr6_3:1150339-1150358 Msa0932860:CDS 35.0%
GTCCTTGCATTTCAAACAAT+GGG + chr6_3:1150344-1150363 None:intergenic 35.0%
TTTGATGTAATGACTCTTGG+TGG + chr6_3:1150394-1150413 None:intergenic 35.0%
GTGTTTGATGTAATGACTCT+TGG + chr6_3:1150397-1150416 None:intergenic 35.0%
ATTGTTGTGAAACCTGAATG+TGG - chr6_3:1150604-1150623 Msa0932860:intron 35.0%
GTCATATGTCTCTGATTCAA+AGG - chr6_3:1150708-1150727 Msa0932860:intron 35.0%
! CACAATTGTGAGGTATCAAT+TGG + chr6_3:1150746-1150765 None:intergenic 35.0%
! TTTGAAATAAGAACGACCCA+TGG - chr6_3:1150988-1151007 Msa0932860:intron 35.0%
AAATTGCTCCAATTCTCCAT+GGG + chr6_3:1151007-1151026 None:intergenic 35.0%
ATGGAGAATTGGAGCAATTT+GGG - chr6_3:1151007-1151026 Msa0932860:intron 35.0%
AGCAATTTGGGAACCTAATT+TGG - chr6_3:1151019-1151038 Msa0932860:CDS 35.0%
GGAGTTAAAAGTTGTGTTGA+AGG + chr6_3:1151067-1151086 None:intergenic 35.0%
AGACGCAACATCAAAGTTTA+TGG + chr6_3:1151166-1151185 None:intergenic 35.0%
TAAACTTTGATGTTGCGTCT+CGG - chr6_3:1151166-1151185 Msa0932860:CDS 35.0%
TCGATGTTGAAATCAACTGT+TGG - chr6_3:1151201-1151220 Msa0932860:CDS 35.0%
ATGTTGAAATCAACTGTTGG+AGG - chr6_3:1151204-1151223 Msa0932860:CDS 35.0%
TTCAGAATCCGATCAATGTT+TGG + chr6_3:1151259-1151278 None:intergenic 35.0%
TGCAGAAATGATTGCTGAAT+CGG + chr6_3:1151430-1151449 None:intergenic 35.0%
AGAGTAATGGCTTAAGTCTT+AGG + chr6_3:1148913-1148932 None:intergenic 35.0%
CTATAAAAGGGACCAATGAT+TGG + chr6_3:1148998-1149017 None:intergenic 35.0%
! ACGTGTCCCATATGATATTT+TGG - chr6_3:1149061-1149080 Msa0932860:intron 35.0%
!! AGTTTTGTAGGGTAGTTATC+AGG - chr6_3:1151954-1151973 Msa0932860:intron 35.0%
! GTTTTGTAGGGTAGTTATCA+GGG - chr6_3:1151955-1151974 Msa0932860:intron 35.0%
!! TGCTAACTTGCTAACTATGT+TGG + chr6_3:1151982-1152001 None:intergenic 35.0%
!!! AGGGTTTTAAATAGTGGTTG+CGG - chr6_3:1152021-1152040 Msa0932860:intron 35.0%
TTAAATAGTGGTTGCGGTTA+CGG - chr6_3:1152027-1152046 Msa0932860:intron 35.0%
CAGAGAATTACTGTCAAATG+TGG - chr6_3:1152073-1152092 Msa0932860:intron 35.0%
! CGGACATTTATTTAAAACCC+TGG - chr6_3:1152175-1152194 Msa0932860:intron 35.0%
GGTAGTTATCAATACTACCA+GGG + chr6_3:1152195-1152214 None:intergenic 35.0%
AGGTAGTTATCAATACTACC+AGG + chr6_3:1152196-1152215 None:intergenic 35.0%
TTATGTATAAGGTGCGGAAA+AGG + chr6_3:1152216-1152235 None:intergenic 35.0%
AAACTAGAAAGAGGAATGCA+TGG + chr6_3:1152241-1152260 None:intergenic 35.0%
! TGAACCTTTATTTGAAACCC+TGG - chr6_3:1152385-1152404 Msa0932860:intron 35.0%
GGTGGTTATCAATAATTACC+AGG + chr6_3:1152406-1152425 None:intergenic 35.0%
CATTTCTCATACGTTCAAAC+TGG + chr6_3:1152479-1152498 None:intergenic 35.0%
TATTCATATGATCGGCGTTA+AGG - chr6_3:1152590-1152609 Msa0932860:intron 35.0%
TTTATCTGGCCATTTACATG+TGG - chr6_3:1152635-1152654 Msa0932860:intron 35.0%
TCAGTAATGTTGTCAACTAG+TGG - chr6_3:1152706-1152725 Msa0932860:intron 35.0%
GAATTGCAGAAAATAGTGGT+TGG + chr6_3:1152847-1152866 None:intergenic 35.0%
! TTCTTTTATGCCTTAGAAGC+AGG + chr6_3:1152934-1152953 None:intergenic 35.0%
GTAGTTGTCAATAACTACCA+GGG + chr6_3:1153015-1153034 None:intergenic 35.0%
ACAGAACATTAAGGAACAAC+AGG + chr6_3:1153181-1153200 None:intergenic 35.0%
GGATTAAAGAAAAAGCAACG+TGG - chr6_3:1153424-1153443 Msa0932860:intron 35.0%
!! GACTGATGGTATACTTTTTG+TGG - chr6_3:1153465-1153484 Msa0932860:intron 35.0%
!! GTATACTTTTTGTGGCAATC+AGG - chr6_3:1153473-1153492 Msa0932860:intron 35.0%
AAGGGTCTAAGTTATCTTCA+CGG - chr6_3:1153816-1153835 Msa0932860:intron 35.0%
!!! GAGCCGAAAATTACTGATTT+TGG - chr6_3:1153900-1153919 Msa0932860:intron 35.0%
!! ACTGATTTTGGTATTAGTGC+TGG - chr6_3:1153912-1153931 Msa0932860:intron 35.0%
CTTAGAGAATTCAGTTGCAA+TGG - chr6_3:1153935-1153954 Msa0932860:intron 35.0%
CTTTCATTTCTAATTCGCTC+GGG + chr6_3:1154279-1154298 None:intergenic 35.0%
ATTCTTATCCGGCTGATATT+TGG - chr6_3:1154301-1154320 Msa0932860:intron 35.0%
GATGAATCAGCACAAACAAA+AGG + chr6_3:1154444-1154463 None:intergenic 35.0%
TTTGTGACAAGAGAAAGACA+TGG + chr6_3:1154487-1154506 None:intergenic 35.0%
CACTCAGATTAATAGAATGC+AGG + chr6_3:1154700-1154719 None:intergenic 35.0%
! GGTGAAAACTTCTCTTTTGA+CGG + chr6_3:1154794-1154813 None:intergenic 35.0%
TCAACAAAAGAGCAGAATTC+AGG + chr6_3:1154815-1154834 None:intergenic 35.0%
TGTTGATGCTTGCTTACAAA+AGG - chr6_3:1154829-1154848 Msa0932860:intron 35.0%
! GGCCGTAAAATGTAAACTTT+TGG - chr6_3:1155184-1155203 Msa0932860:intron 35.0%
TTTACCTAAACTCTCGAGTT+TGG - chr6_3:1155314-1155333 Msa0932860:intron 35.0%
! TCTGCTAGAAAGTATAACGT+TGG - chr6_3:1155416-1155435 Msa0932860:intron 35.0%
TCTCGTACTTTGTAATGAAG+GGG + chr6_3:1155556-1155575 None:intergenic 35.0%
GTCTCGTACTTTGTAATGAA+GGG + chr6_3:1155557-1155576 None:intergenic 35.0%
AGTCTCGTACTTTGTAATGA+AGG + chr6_3:1155558-1155577 None:intergenic 35.0%
TCAACATCTGCACAGAAAAA+TGG + chr6_3:1155802-1155821 None:intergenic 35.0%
!! ATCTGGTACACTCTTTTTCA+TGG + chr6_3:1156210-1156229 None:intergenic 35.0%
TTCTCTGGTAAACAACATGT+TGG - chr6_3:1156347-1156366 Msa0932860:CDS 35.0%
! AATCGCCGATTAAAGTTGTT+CGG + chr6_3:1156406-1156425 None:intergenic 35.0%
GGTAATCAGTTTCTCATATG+TGG - chr6_3:1156524-1156543 Msa0932860:intron 35.0%
TAACATCCAATTTGGCTAGT+TGG + chr6_3:1156650-1156669 None:intergenic 35.0%
CTATGGTGTAACATCCAATT+TGG + chr6_3:1156658-1156677 None:intergenic 35.0%
!!! GAAGTTTTCAGATGGTGGAA+CGG - chr6_3:1148214-1148233 Msa0932860:CDS 40.0%
AGTAAGGAGAGTAGATCAGA+CGG - chr6_3:1148580-1148599 Msa0932860:intron 40.0%
! TTTTTCTAGGTCTTCCTCTG+GGG + chr6_3:1148619-1148638 None:intergenic 40.0%
! GTTTTTCTAGGTCTTCCTCT+GGG + chr6_3:1148620-1148639 None:intergenic 40.0%
! AGTTTTTCTAGGTCTTCCTC+TGG + chr6_3:1148621-1148640 None:intergenic 40.0%
CGGTTTACGATAGAACATTC+TGG - chr6_3:1148693-1148712 Msa0932860:intron 40.0%
! GGTACTCTCTTTGAGAGTAA+TGG + chr6_3:1148926-1148945 None:intergenic 40.0%
!! ACTCTCAAAGAGAGTACCAA+AGG - chr6_3:1148928-1148947 Msa0932860:intron 40.0%
!! CTCTCAAAGAGAGTACCAAA+GGG - chr6_3:1148929-1148948 Msa0932860:intron 40.0%
CAATGATTGGAAGAAAGGGT+AGG + chr6_3:1148985-1149004 None:intergenic 40.0%
CTACCCTTTCTTCCAATCAT+TGG - chr6_3:1148983-1149002 Msa0932860:intron 40.0%
GGACCAATGATTGGAAGAAA+GGG + chr6_3:1148989-1149008 None:intergenic 40.0%
TAACTTCAACCTTGAGGTCA+AGG + chr6_3:1149118-1149137 None:intergenic 40.0%
CAATTCATACAATGGGATCC+GGG + chr6_3:1149224-1149243 None:intergenic 40.0%
ATTGTAAAGTCTTCCGAGGA+AGG - chr6_3:1149240-1149259 Msa0932860:intron 40.0%
!!! CGAGCTATTTTTTCCTTCCT+CGG + chr6_3:1149256-1149275 None:intergenic 40.0%
TCATGTGTCATGTTCTGCTA+TGG + chr6_3:1149371-1149390 None:intergenic 40.0%
AGAAAACCCACAACAGAACA+TGG - chr6_3:1149412-1149431 Msa0932860:intron 40.0%
! TGATACACAAGAGTATGTGG+TGG + chr6_3:1149618-1149637 None:intergenic 40.0%
! GACTGATACACAAGAGTATG+TGG + chr6_3:1149621-1149640 None:intergenic 40.0%
! GGAATTTGTTCAGCAAGGAA+GGG + chr6_3:1149666-1149685 None:intergenic 40.0%
! TGGAATTTGTTCAGCAAGGA+AGG + chr6_3:1149667-1149686 None:intergenic 40.0%
! ATGGTGGAATTTGTTCAGCA+AGG + chr6_3:1149671-1149690 None:intergenic 40.0%
TAATTGTGCAGGCAAACCAA+AGG - chr6_3:1149718-1149737 Msa0932860:intron 40.0%
GCTCATTGCTTGATTTCCTT+TGG + chr6_3:1149737-1149756 None:intergenic 40.0%
AAGGAAATCAAGCAATGAGC+AGG - chr6_3:1149737-1149756 Msa0932860:intron 40.0%
AGGAAATCAAGCAATGAGCA+GGG - chr6_3:1149738-1149757 Msa0932860:intron 40.0%
AATCTAACCAACCAAGAGGT+AGG - chr6_3:1149822-1149841 Msa0932860:intron 40.0%
! TCTATTTGTGGTGGTGAAGA+TGG + chr6_3:1149866-1149885 None:intergenic 40.0%
ATTAAACGCCTAACATCAGC+TGG - chr6_3:1150112-1150131 Msa0932860:intron 40.0%
CATTTCAAACAATGGGATCC+GGG + chr6_3:1150337-1150356 None:intergenic 40.0%
GCATTTCAAACAATGGGATC+CGG + chr6_3:1150338-1150357 None:intergenic 40.0%
GGTCCTTGCATTTCAAACAA+TGG + chr6_3:1150345-1150364 None:intergenic 40.0%
!! CACATAATGGGCAGCAAATA+AGG - chr6_3:1150414-1150433 Msa0932860:CDS 40.0%
TAGTTGTTGGGTATGGAACA+AGG + chr6_3:1150468-1150487 None:intergenic 40.0%
!! TTGGTGATGGTGTAGTTGTT+GGG + chr6_3:1150480-1150499 None:intergenic 40.0%
!! ATTGGTGATGGTGTAGTTGT+TGG + chr6_3:1150481-1150500 None:intergenic 40.0%
GATGAACATCTACCACATTC+AGG + chr6_3:1150619-1150638 None:intergenic 40.0%
CAGTTACAATGCATGCAACA+TGG + chr6_3:1150687-1150706 None:intergenic 40.0%
AACTCGATAGCACAATTGTG+AGG + chr6_3:1150756-1150775 None:intergenic 40.0%
! GAGTTTCGATTTGCGATTGT+CGG - chr6_3:1150771-1150790 Msa0932860:intron 40.0%
CTGTGGAATTTCAAGCAACA+GGG + chr6_3:1150918-1150937 None:intergenic 40.0%
ACTGTGGAATTTCAAGCAAC+AGG + chr6_3:1150919-1150938 None:intergenic 40.0%
AAGCATTCAGATGATGACTG+TGG + chr6_3:1150935-1150954 None:intergenic 40.0%
CAGTCATCATCTGAATGCTT+CGG - chr6_3:1150935-1150954 Msa0932860:intron 40.0%
CAAATTGCTCCAATTCTCCA+TGG + chr6_3:1151008-1151027 None:intergenic 40.0%
CATGGAGAATTGGAGCAATT+TGG - chr6_3:1151006-1151025 Msa0932860:intron 40.0%
TCCTGATTGTCAACTCGAAT+TGG - chr6_3:1151084-1151103 Msa0932860:CDS 40.0%
!! ACCAATTCGAGTTGACAATC+AGG + chr6_3:1151088-1151107 None:intergenic 40.0%
TACCGATGCCAAACATTGAT+CGG - chr6_3:1151248-1151267 Msa0932860:intron 40.0%
ATCCGATCAATGTTTGGCAT+CGG + chr6_3:1151253-1151272 None:intergenic 40.0%
TACTGTTTCAGAGTCCAAGT+TGG + chr6_3:1151292-1151311 None:intergenic 40.0%
!! ATCGGTTCTGAATCTGAAAG+AGG - chr6_3:1151384-1151403 Msa0932860:intron 40.0%
! GTTCTGAATCTGAAAGAGGA+AGG - chr6_3:1151388-1151407 Msa0932860:intron 40.0%
TGCAAGCAACTGAGATATGA+TGG - chr6_3:1151446-1151465 Msa0932860:intron 40.0%
!! TCATGGAAGTATCACACCAA+CGG + chr6_3:1151509-1151528 None:intergenic 40.0%
CTTACGAAGAATCACACCAA+CGG + chr6_3:1151533-1151552 None:intergenic 40.0%
TATGAACTCCTCTTTGTCCA+TGG + chr6_3:1151556-1151575 None:intergenic 40.0%
! GGTACTCTCTTTGAGAGTAA+TGG + chr6_3:1148926-1148945 None:intergenic 40.0%
!! ACTCTCAAAGAGAGTACCAA+AGG - chr6_3:1148928-1148947 Msa0932860:intron 40.0%
!! CTCTCAAAGAGAGTACCAAA+GGG - chr6_3:1148929-1148948 Msa0932860:intron 40.0%
CAATGATTGGAAGAAAGGGT+AGG + chr6_3:1148985-1149004 None:intergenic 40.0%
CTACCCTTTCTTCCAATCAT+TGG - chr6_3:1148983-1149002 Msa0932860:intron 40.0%
GGACCAATGATTGGAAGAAA+GGG + chr6_3:1148989-1149008 None:intergenic 40.0%
TAGCAAGTTAGCATAGCCAT+AGG - chr6_3:1151989-1152008 Msa0932860:intron 40.0%
AGCAAGTTAGCATAGCCATA+GGG - chr6_3:1151990-1152009 Msa0932860:intron 40.0%
ATAGCCATAGGGTAGTTATC+AGG - chr6_3:1152001-1152020 Msa0932860:intron 40.0%
TAGCCATAGGGTAGTTATCA+GGG - chr6_3:1152002-1152021 Msa0932860:intron 40.0%
AAACCCTGATAACTACCCTA+TGG + chr6_3:1152008-1152027 None:intergenic 40.0%
CTGTCAAATGTGGCTGATAT+TGG - chr6_3:1152083-1152102 Msa0932860:intron 40.0%
AATGTCCGAAATTGCGAAGT+GGG + chr6_3:1152163-1152182 None:intergenic 40.0%
AAATGTCCGAAATTGCGAAG+TGG + chr6_3:1152164-1152183 None:intergenic 40.0%
TTGAGAGATAGTTGGGATTG+AGG + chr6_3:1152292-1152311 None:intergenic 40.0%
AAACTAATGCGCAGAAAAGG+TGG + chr6_3:1152424-1152443 None:intergenic 40.0%
GAGAAACTAATGCGCAGAAA+AGG + chr6_3:1152427-1152446 None:intergenic 40.0%
AAACTGGAAAGAGGAAGACA+TGG + chr6_3:1152463-1152482 None:intergenic 40.0%
CATACGTTCAAACTGGAAAG+AGG + chr6_3:1152472-1152491 None:intergenic 40.0%
CAACTCAGCAACTTCAATAC+CGG + chr6_3:1152874-1152893 None:intergenic 40.0%
! TGCTATTTGTGCGACTCTAT+TGG - chr6_3:1152892-1152911 Msa0932860:intron 40.0%
GTGATTAATGCCTGCTTCTA+AGG - chr6_3:1152921-1152940 Msa0932860:intron 40.0%
GGTAGTTGTCAATAACTACC+AGG + chr6_3:1153016-1153035 None:intergenic 40.0%
TCTACAAGACCCTCATAACA+AGG + chr6_3:1153546-1153565 None:intergenic 40.0%
! GAGGGTCTTGTAGAATTTCA+TGG - chr6_3:1153552-1153571 Msa0932860:intron 40.0%
! GCATTTTACACTCCAGATTC+TGG - chr6_3:1153576-1153595 Msa0932860:intron 40.0%
ATGCTAATCTGTCCAGAATC+TGG + chr6_3:1153591-1153610 None:intergenic 40.0%
TGGACAGATTAGCATAGCTT+TGG - chr6_3:1153596-1153615 Msa0932860:intron 40.0%
!! TAGCATAGCTTTGGAGTACA+TGG - chr6_3:1153605-1153624 Msa0932860:intron 40.0%
!! ATAGCTTTGGAGTACATGGA+TGG - chr6_3:1153609-1153628 Msa0932860:intron 40.0%
ACGTAGGAGCTTATGAAACA+TGG + chr6_3:1153694-1153713 None:intergenic 40.0%
TTCATAAGCTCCTACGTGTA+AGG - chr6_3:1153697-1153716 Msa0932860:intron 40.0%
TAAGTTATCTTCACGGAGTC+AGG - chr6_3:1153823-1153842 Msa0932860:intron 40.0%
TATGTTGCACTGCTATAACG+TGG - chr6_3:1154106-1154125 Msa0932860:intron 40.0%
TTTCAGTGTGCTACATTCGT+TGG - chr6_3:1154234-1154253 Msa0932860:intron 40.0%
TTCCCGTATACAGCTAATGA+AGG - chr6_3:1154363-1154382 Msa0932860:intron 40.0%
GACCTTCATTAGCTGTATAC+GGG + chr6_3:1154368-1154387 None:intergenic 40.0%
GGACCTTCATTAGCTGTATA+CGG + chr6_3:1154369-1154388 None:intergenic 40.0%
TCCTGTCAATCTTATGTTGC+AGG - chr6_3:1154386-1154405 Msa0932860:intron 40.0%
ACCTGCAACATAAGATTGAC+AGG + chr6_3:1154390-1154409 None:intergenic 40.0%
GGACTGAGAAAATTTCAGCA+TGG + chr6_3:1154466-1154485 None:intergenic 40.0%
ATTCCCACATTTCACATGGA+CGG + chr6_3:1154556-1154575 None:intergenic 40.0%
ATCCATTCCCACATTTCACA+TGG + chr6_3:1154560-1154579 None:intergenic 40.0%
GAATATCTGATACGGATGAG+TGG - chr6_3:1154672-1154691 Msa0932860:intron 40.0%
! AACTTCTCTTTTGACGGTGA+TGG + chr6_3:1154788-1154807 None:intergenic 40.0%
AGCTCGATATCATATCAGCA+TGG - chr6_3:1154900-1154919 Msa0932860:intron 40.0%
TAGTATTAGAGCGACTCCAT+TGG + chr6_3:1154988-1155007 None:intergenic 40.0%
CGAGAGTTTAGGTAAACTCA+AGG + chr6_3:1155310-1155329 None:intergenic 40.0%
ACTGCCAAGATAGATTTACC+TGG - chr6_3:1155575-1155594 Msa0932860:intron 40.0%
AAAACACTGCGAACAAATCC+AGG + chr6_3:1155596-1155615 None:intergenic 40.0%
CAGGTTGTGTCAAGAGTTTA+GGG - chr6_3:1155744-1155763 Msa0932860:intron 40.0%
TGCATACTTTGCAGTTTCTC+TGG - chr6_3:1156332-1156351 Msa0932860:CDS 40.0%
GAACAACTTTAATCGGCGAT+TGG - chr6_3:1156405-1156424 Msa0932860:intron 40.0%
TGAAGACGGAGTTGCAATAA+GGG - chr6_3:1156481-1156500 Msa0932860:CDS 40.0%
CAGTTTCTCATATGTGGAGA+TGG - chr6_3:1156530-1156549 Msa0932860:intron 40.0%
AGAGGGCTTACCAAACTTTA+AGG - chr6_3:1156562-1156581 Msa0932860:intron 40.0%
CTTATCCCACTAAGTGGGAT+CGG + chr6_3:1148749-1148768 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr6_3:1148754-1148773 None:intergenic 45.0%
! ACAAGCCTTATCCCACTAAG+TGG + chr6_3:1148755-1148774 None:intergenic 45.0%
GGGACCAATGATTGGAAGAA+AGG + chr6_3:1148990-1149009 None:intergenic 45.0%
!!! TGTTTTGGAAGCCTCTTGGA+AGG + chr6_3:1149169-1149188 None:intergenic 45.0%
!!! TACGTGTTTTGGAAGCCTCT+TGG + chr6_3:1149173-1149192 None:intergenic 45.0%
GTGGATGCTATGTGTTCATC+GGG + chr6_3:1149202-1149221 None:intergenic 45.0%
GGTGGATGCTATGTGTTCAT+CGG + chr6_3:1149203-1149222 None:intergenic 45.0%
ATGAACACATAGCATCCACC+CGG - chr6_3:1149203-1149222 Msa0932860:intron 45.0%
! TTGTGGGTTTTCTGTGTTGG+TGG + chr6_3:1149405-1149424 None:intergenic 45.0%
! CTGTTGTGGGTTTTCTGTGT+TGG + chr6_3:1149408-1149427 None:intergenic 45.0%
AGTTGCAACAATTGGCATGG+TGG + chr6_3:1149687-1149706 None:intergenic 45.0%
TGGAGTTGCAACAATTGGCA+TGG + chr6_3:1149690-1149709 None:intergenic 45.0%
! ACAAATAAAGCACCAGGGAG+TGG + chr6_3:1150313-1150332 None:intergenic 45.0%
! CGGGAACAAATAAAGCACCA+GGG + chr6_3:1150318-1150337 None:intergenic 45.0%
!! CCTGGTGCTTTATTTGTTCC+CGG - chr6_3:1150316-1150335 Msa0932860:intron 45.0%
AGCAAATAAGGTCCTGAAGC+TGG - chr6_3:1150426-1150445 Msa0932860:CDS 45.0%
AAATAAGGTCCTGAAGCTGG+TGG - chr6_3:1150429-1150448 Msa0932860:CDS 45.0%
CAATTGAAACCACCAGCTTC+AGG + chr6_3:1150441-1150460 None:intergenic 45.0%
GATGGTGTAGTTGTTGGGTA+TGG + chr6_3:1150475-1150494 None:intergenic 45.0%
ATGGATGCCAAACTCGACTA+AGG + chr6_3:1150668-1150687 None:intergenic 45.0%
! TGTGAGGTATCAATTGGTGC+TGG + chr6_3:1150740-1150759 None:intergenic 45.0%
GATTTGCGATTGTCGGAATC+CGG - chr6_3:1150778-1150797 Msa0932860:intron 45.0%
!! GATGGACTGACAATGATCCA+TGG - chr6_3:1150877-1150896 Msa0932860:intron 45.0%
ATCATCTGAATGCTTCGGTC+CGG - chr6_3:1150940-1150959 Msa0932860:intron 45.0%
AAGAACGACCCATGGAGAAT+TGG - chr6_3:1150996-1151015 Msa0932860:intron 45.0%
GTTGTGTTGAAGGATTCTCC+AGG + chr6_3:1151057-1151076 None:intergenic 45.0%
ATGGAGACGCATGAACTGTT+CGG + chr6_3:1151147-1151166 None:intergenic 45.0%
TGAATCCGCAATCACCAACT+TGG - chr6_3:1151275-1151294 Msa0932860:intron 45.0%
!! AGAGTCCAAGTTGGTGATTG+CGG + chr6_3:1151283-1151302 None:intergenic 45.0%
AGTATCACACCAACGGTTCA+TGG + chr6_3:1151502-1151521 None:intergenic 45.0%
GTGATACTTCCATGAACCGT+TGG - chr6_3:1151514-1151533 Msa0932860:intron 45.0%
AGAATCACACCAACGGTTCA+TGG + chr6_3:1151526-1151545 None:intergenic 45.0%
GTGTGATTCTTCGTAAGCCA+TGG - chr6_3:1151536-1151555 Msa0932860:intron 45.0%
TTCGTAAGCCATGGACAAAG+AGG - chr6_3:1151545-1151564 Msa0932860:intron 45.0%
GGGACCAATGATTGGAAGAA+AGG + chr6_3:1148990-1149009 None:intergenic 45.0%
AAGGTTCACAACCACGAACT+GGG + chr6_3:1152373-1152392 None:intergenic 45.0%
AAAGGTTCACAACCACGAAC+TGG + chr6_3:1152374-1152393 None:intergenic 45.0%
! TAGAAACGAAGGCGTAGAAG+AGG + chr6_3:1153037-1153056 None:intergenic 45.0%
AGCAGCTGCTTACTGAGATA+AGG - chr6_3:1153505-1153524 Msa0932860:intron 45.0%
! ATGCGAAGCACCTTGTTATG+AGG - chr6_3:1153533-1153552 Msa0932860:intron 45.0%
! TGCGAAGCACCTTGTTATGA+GGG - chr6_3:1153534-1153553 Msa0932860:intron 45.0%
! ACTCAAGAAGTGCAAGACCA+AGG + chr6_3:1154329-1154348 None:intergenic 45.0%
AGACCGTCCATGTGAAATGT+GGG - chr6_3:1154550-1154569 Msa0932860:intron 45.0%
GTCCATGTGAAATGTGGGAA+TGG - chr6_3:1154555-1154574 Msa0932860:intron 45.0%
!! GTGATGGTGATGGATCATCA+AGG + chr6_3:1154772-1154791 None:intergenic 45.0%
!! TCTTTTGACGGTGATGGTGA+TGG + chr6_3:1154782-1154801 None:intergenic 45.0%
! TCTGCAGTTGGCCTATTATC+TGG + chr6_3:1154857-1154876 None:intergenic 45.0%
GTTGCCAAACTCGAGAGTTT+AGG + chr6_3:1155321-1155340 None:intergenic 45.0%
!!! TATTTTGACATGTGGGCAGC+AGG - chr6_3:1155725-1155744 Msa0932860:intron 45.0%
GCAGGTTGTGTCAAGAGTTT+AGG - chr6_3:1155743-1155762 Msa0932860:intron 45.0%
GTTGTGTCAAGAGTTTAGGG+CGG - chr6_3:1155747-1155766 Msa0932860:intron 45.0%
ACGATTCGTGGCAACATACA+AGG - chr6_3:1155855-1155874 Msa0932860:intron 45.0%
! ACCACATGCACCAACTTTTC+CGG + chr6_3:1156434-1156453 None:intergenic 45.0%
GTGAAGACGGAGTTGCAATA+AGG - chr6_3:1156480-1156499 Msa0932860:CDS 45.0%
GTCTCGGGATCCTTCATAAT+TGG - chr6_3:1156503-1156522 Msa0932860:intron 45.0%
TGGAGATGGTGTTCAAGTAG+AGG - chr6_3:1156544-1156563 Msa0932860:intron 45.0%
GGAGATGGTGTTCAAGTAGA+GGG - chr6_3:1156545-1156564 Msa0932860:intron 45.0%
GTGGAACCAACTAGCCAAAT+TGG - chr6_3:1156641-1156660 Msa0932860:CDS 45.0%
AAGGAGAGTAGATCAGACGG+AGG - chr6_3:1148583-1148602 Msa0932860:intron 50.0%
ACTAAGTGGGATCGGCTACA+TGG + chr6_3:1148741-1148760 None:intergenic 50.0%
ATGTAGCCGATCCCACTTAG+TGG - chr6_3:1148740-1148759 Msa0932860:intron 50.0%
TGTAGCCGATCCCACTTAGT+GGG - chr6_3:1148741-1148760 Msa0932860:intron 50.0%
CGATCCCACTTAGTGGGATA+AGG - chr6_3:1148747-1148766 Msa0932860:intron 50.0%
!! AGAGAGTACCAAAGGGAGAG+AGG - chr6_3:1148936-1148955 Msa0932860:intron 50.0%
AAGTCTCTCCTCTCTCCCTT+TGG + chr6_3:1148947-1148966 None:intergenic 50.0%
GATAGGAGCAACCTTCCAAG+AGG - chr6_3:1149155-1149174 Msa0932860:CDS 50.0%
! TCGGGCTGTTCTACGTGTTT+TGG + chr6_3:1149184-1149203 None:intergenic 50.0%
TTCATACAATGGGATCCGGG+TGG + chr6_3:1149221-1149240 None:intergenic 50.0%
CGTGTGCCATGTTCTGTTGT+GGG + chr6_3:1149421-1149440 None:intergenic 50.0%
AACCAACCAAGAGGTAGGCT+AGG - chr6_3:1149827-1149846 Msa0932860:intron 50.0%
ATCCTAGCCTACCTCTTGGT+TGG + chr6_3:1149832-1149851 None:intergenic 50.0%
ATGCATCCTAGCCTACCTCT+TGG + chr6_3:1149836-1149855 None:intergenic 50.0%
AGACTGTGACTGTGGGTGAA+TGG + chr6_3:1150240-1150259 None:intergenic 50.0%
! CCGGGAACAAATAAAGCACC+AGG + chr6_3:1150319-1150338 None:intergenic 50.0%
CTCACTGCCTTAGTCGAGTT+TGG - chr6_3:1150658-1150677 Msa0932860:intron 50.0%
GGACTGACAATGATCCATGG+CGG - chr6_3:1150880-1150899 Msa0932860:intron 50.0%
! TGATCCATGGCGGAAATGTG+TGG - chr6_3:1150890-1150909 Msa0932860:intron 50.0%
TCATCTGAATGCTTCGGTCC+GGG - chr6_3:1150941-1150960 Msa0932860:intron 50.0%
GACCTGATTCCATGAACCGT+TGG - chr6_3:1151490-1151509 Msa0932860:intron 50.0%
CACCAACGGTTCATGGAATC+AGG + chr6_3:1151495-1151514 None:intergenic 50.0%
!! AGAGAGTACCAAAGGGAGAG+AGG - chr6_3:1148936-1148955 Msa0932860:intron 50.0%
AAGTCTCTCCTCTCTCCCTT+TGG + chr6_3:1148947-1148966 None:intergenic 50.0%
!! GGCTGATATTGGCTCAACAG+TGG - chr6_3:1152094-1152113 Msa0932860:intron 50.0%
AGCAGCCCACTTCGCAATTT+CGG - chr6_3:1152155-1152174 Msa0932860:intron 50.0%
TTATGTTGCAGCCCAGTTCG+TGG - chr6_3:1152359-1152378 Msa0932860:intron 50.0%
!! GCTTTGGAGTACATGGATGG+AGG - chr6_3:1153612-1153631 Msa0932860:intron 50.0%
TCACGAGTCGCGAAAAACTG+TGG - chr6_3:1154067-1154086 Msa0932860:intron 50.0%
CCAAGGCTCCAAATATCAGC+CGG + chr6_3:1154312-1154331 None:intergenic 50.0%
GGTCTTGCACTTCTTGAGTC+TGG - chr6_3:1154330-1154349 Msa0932860:intron 50.0%
GCACTTCTTGAGTCTGGTAC+TGG - chr6_3:1154336-1154355 Msa0932860:intron 50.0%
GAGACCGTCCATGTGAAATG+TGG - chr6_3:1154549-1154568 Msa0932860:intron 50.0%
TAATAGGCCAACTGCAGAGC+AGG - chr6_3:1154859-1154878 Msa0932860:intron 50.0%
GTGCACAAGAAGCTGCAGTA+GGG + chr6_3:1155534-1155553 None:intergenic 50.0%
GTATGTTGCCACGAATCGTC+AGG + chr6_3:1155854-1155873 None:intergenic 50.0%
! TTTAATCGGCGATTGGCCAC+CGG - chr6_3:1156412-1156431 Msa0932860:intron 50.0%
! ACATGCACCAACTTTTCCGG+TGG + chr6_3:1156431-1156450 None:intergenic 50.0%
!! ACCGGAAAAGTTGGTGCATG+TGG - chr6_3:1156430-1156449 Msa0932860:intron 50.0%
AAGCTGCAATGTCGAGCACA+CGG - chr6_3:1156458-1156477 Msa0932860:CDS 50.0%
CGGAGTTGCAATAAGGGTCT+CGG - chr6_3:1156487-1156506 Msa0932860:CDS 50.0%
GGAGTTGCAATAAGGGTCTC+GGG - chr6_3:1156488-1156507 Msa0932860:CDS 50.0%
GAGGATAGTCAGATCCCCAG+AGG - chr6_3:1148602-1148621 Msa0932860:intron 55.0%
GCGTGTGCCATGTTCTGTTG+TGG + chr6_3:1149422-1149441 None:intergenic 55.0%
GTGATAGGAAGACCACTCCC+TGG - chr6_3:1150298-1150317 Msa0932860:intron 55.0%
TTGCGATTGTCGGAATCCGG+TGG - chr6_3:1150781-1150800 Msa0932860:intron 55.0%
ATTGTCGGAATCCGGTGGCT+TGG - chr6_3:1150786-1150805 Msa0932860:intron 55.0%
AGAACCCCCACTCTGTCTGA+TGG - chr6_3:1150835-1150854 Msa0932860:intron 55.0%
ACAGCCATCAGACAGAGTGG+GGG + chr6_3:1150842-1150861 None:intergenic 55.0%
CACAGCCATCAGACAGAGTG+GGG + chr6_3:1150843-1150862 None:intergenic 55.0%
CCACAGCCATCAGACAGAGT+GGG + chr6_3:1150844-1150863 None:intergenic 55.0%
ACTCTGTCTGATGGCTGTGG+CGG - chr6_3:1150844-1150863 Msa0932860:intron 55.0%
GGTACCACACATTTCCGCCA+TGG + chr6_3:1150897-1150916 None:intergenic 55.0%
CATCTGAATGCTTCGGTCCG+GGG - chr6_3:1150942-1150961 Msa0932860:intron 55.0%
ATCTGAATGCTTCGGTCCGG+GGG - chr6_3:1150943-1150962 Msa0932860:intron 55.0%
! CCGGCTGATATTTGGAGCCT+TGG - chr6_3:1154309-1154328 Msa0932860:intron 55.0%
TCTCTCACCTGCTCTGCAGT+TGG + chr6_3:1154869-1154888 None:intergenic 55.0%
GGTGCACAAGAAGCTGCAGT+AGG + chr6_3:1155535-1155554 None:intergenic 55.0%
! TTGACGGACCTGACGATTCG+TGG - chr6_3:1155843-1155862 Msa0932860:intron 55.0%
! CGATTGGCCACCGGAAAAGT+TGG - chr6_3:1156421-1156440 Msa0932860:intron 55.0%
TGTCGAGCACACGGTGAAGA+CGG - chr6_3:1156467-1156486 Msa0932860:CDS 55.0%
! TCGGAATCCGGTGGCTTGGA+AGG - chr6_3:1150790-1150809 Msa0932860:intron 60.0%
! GAATCCGGTGGCTTGGAAGG+CGG - chr6_3:1150793-1150812 Msa0932860:intron 60.0%
CCCACTCTGTCTGATGGCTG+TGG - chr6_3:1150841-1150860 Msa0932860:intron 60.0%
GCCACAGCCATCAGACAGAG+TGG + chr6_3:1150845-1150864 None:intergenic 60.0%
ATGCTTCGGTCCGGGGGTTT+CGG - chr6_3:1150949-1150968 Msa0932860:intron 60.0%
CAGTGGCTGCGTTGCAGTTG+CGG - chr6_3:1152111-1152130 Msa0932860:intron 60.0%
TGGAAGGCGGTCGGAAGAGC+AGG - chr6_3:1150806-1150825 Msa0932860:intron 65.0%
CTGTCTGATGGCTGTGGCGG+TGG - chr6_3:1150847-1150866 Msa0932860:intron 65.0%
! TGGCTGTGGCGGTGGTAACG+CGG - chr6_3:1150855-1150874 Msa0932860:intron 65.0%
! TGTGGCGGTGGTAACGCGGA+TGG - chr6_3:1150859-1150878 Msa0932860:intron 65.0%
CCGACCGCCTTCCAAGCCAC+CGG + chr6_3:1150800-1150819 None:intergenic 70.0%
! CCGGTGGCTTGGAAGGCGGT+CGG - chr6_3:1150797-1150816 Msa0932860:intron 70.0%
CTTCGGTCCGGGGGTTTCGG+CGG - chr6_3:1150952-1150971 Msa0932860:intron 70.0%
ACCACCACCGCCGAAACCCC+CGG + chr6_3:1150962-1150981 None:intergenic 70.0%
TCCGGGGGTTTCGGCGGTGG+TGG - chr6_3:1150958-1150977 Msa0932860:intron 75.0%
! CGGTCCGGGGGTTTCGGCGG+TGG - chr6_3:1150955-1150974 Msa0932860:intron 80.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 1147921 1156809 1147921 ID=Msa0932860;Name=Msa0932860
chr6_3 mRNA 1147921 1156809 1147921 ID=Msa0932860-mRNA-1;Parent=Msa0932860;Name=Msa0932860-mRNA-1;_AED=0.22;_eAED=0.22;_QI=91|0.75|0.66|1|0.75|0.77|9|103|454
chr6_3 exon 1147921 1148384 1147921 ID=Msa0932860-mRNA-1:exon:472;Parent=Msa0932860-mRNA-1
chr6_3 exon 1148824 1148915 1148824 ID=Msa0932860-mRNA-1:exon:471;Parent=Msa0932860-mRNA-1
chr6_3 exon 1149081 1149188 1149081 ID=Msa0932860-mRNA-1:exon:470;Parent=Msa0932860-mRNA-1
chr6_3 exon 1149850 1149963 1149850 ID=Msa0932860-mRNA-1:exon:469;Parent=Msa0932860-mRNA-1
chr6_3 exon 1150323 1150448 1150323 ID=Msa0932860-mRNA-1:exon:468;Parent=Msa0932860-mRNA-1
chr6_3 exon 1151017 1151235 1151017 ID=Msa0932860-mRNA-1:exon:467;Parent=Msa0932860-mRNA-1
chr6_3 exon 1156255 1156420 1156255 ID=Msa0932860-mRNA-1:exon:466;Parent=Msa0932860-mRNA-1
chr6_3 exon 1156436 1156512 1156436 ID=Msa0932860-mRNA-1:exon:465;Parent=Msa0932860-mRNA-1
chr6_3 exon 1156617 1156809 1156617 ID=Msa0932860-mRNA-1:exon:464;Parent=Msa0932860-mRNA-1
chr6_3 five_prime_UTR 1156719 1156809 1156719 ID=Msa0932860-mRNA-1:five_prime_utr;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1156617 1156718 1156617 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1156436 1156512 1156436 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1156255 1156420 1156255 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1151017 1151235 1151017 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1150323 1150448 1150323 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1149850 1149963 1149850 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1149081 1149188 1149081 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1148824 1148915 1148824 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 CDS 1148024 1148384 1148024 ID=Msa0932860-mRNA-1:cds;Parent=Msa0932860-mRNA-1
chr6_3 three_prime_UTR 1147921 1148023 1147921 ID=Msa0932860-mRNA-1:three_prime_utr;Parent=Msa0932860-mRNA-1
Gene Sequence

>Msa0932860

ATGTCTGGTTTAGAAGAATTGAGAAAAAAGCTTACACCTTTATTTGATGCTGAAAATGGTTTCTCATCAACTTCATCTTTTGACCCTAATGATTCTTACACTTTTTCAGATGGTGGAACGGTGAATTTGTTGAGTAGATCATATGGTGTGTATAACATCAATGAACTTGGATTACAGAAGTCTGTTGATGAAAGTGATGATAATGAAAAAACATATAGATGTGGTTCTCATGAGATGAGAATTTTTGGAGCAATTGGTAGTGGTGCTAGTAGTGTTGTTCAAAGAGCTATGCATATACCAACTCATAGGATTATTGCTTTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGACAGCAGCTGCTTACTGAGATAAGGACGTTATGCGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCATGGTGCATTTTACACTCCAGATTCTGGACAGATTAGCATAGCTTTGGAGTACATGGATGGAGGATCACTTGCAGATATTTTGCGAATGCATAAAACGATACCTGAACCTATTTTATCATCCATGTTTCATAAGCTCCTACGTCGAATTAGAAATGAAAGTTATTCTTATCCGGCTGATATTTGGAGCCTTGGTCTTGCACTTCTTGAGTCTGGTACTGGAGAATTCCCGTATACAGCTAATGAAGGTCCTGTCAATCTTATGTTGCAGATCCTTGATGATCCATCACCATCACCGTCAAAAGAGAAGTTTTCACCTGAATTCTGCTCTTTTGTTGATGCTTGCTTACAAAAGGATCCAGATAATAGGCCAACTGCAGAGCAGCTTCTTGTGCACCCCTTCATTACAAAGTACGAGACTGCCAAGATAGATTTACCTGGATTTGTTCGCAGTGTTTTTGATCCTACACAAAGAATGAAAGATTTGGCAGATATGTTGACAATACATTATTACTTGCTATTTGACGGACCTGACGATTCGTGGCAACATACAAGGAACTTCTATAACGAAAACTCAATTTTCAGTTTCTCTGGTAAACAACATGTTGGTCCTAACAATGTCTTTACAACTCTATCGAGTATCCGAACAACTTTAATCGGCGATTGGCCACCGGAAAAGTTGGTGCATGTGGTTGAGAAGCTGCAATGTCGAGCACACGGTGAAGACGGAGTTGCAATAAGGGTCTCGGGATCCTTCATAATTGGTAATCAGTTTCTCATATGTGGAGATGGTGTTCAAGTAGAGGGCTTACCAAACTTTAAGGATCTTGGAATTGATATTTCTAGTAAAAGAATGGGTACATTTCATGAACAATTCATAGTGGAACCAACTAGCCAAATTGGATGTTACACCATAGTTAAACAAGAACTATACATTAACCAATAA

Protein sequence

>Msa0932860

MSGLEELRKKLTPLFDAENGFSSTSSFDPNDSYTFSDGGTVNLLSRSYGVYNINELGLQKSVDESDDNEKTYRCGSHEMRIFGAIGSGASSVVQRAMHIPTHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHKTIPEPILSSMFHKLLRRIRNESYSYPADIWSLGLALLESGTGEFPYTANEGPVNLMLQILDDPSPSPSKEKFSPEFCSFVDACLQKDPDNRPTAEQLLVHPFITKYETAKIDLPGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDSWQHTRNFYNENSIFSFSGKQHVGPNNVFTTLSSIRTTLIGDWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGVQVEGLPNFKDLGIDISSKRMGTFHEQFIVEPTSQIGCYTIVKQELYINQ*