AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0933350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933350 MtrunA17_Chr6g0450101 98.565 209 2 1 1 208 1 209 2.43e-155 428
Msa0933350 MtrunA17_Chr7g0228231 73.148 216 42 5 1 208 1 208 2.59e-106 304
Msa0933350 MtrunA17_Chr1g0209661 73.333 120 32 0 3 122 16 135 1.16e-65 204
Msa0933350 MtrunA17_Chr1g0194291 75.000 108 27 0 14 121 21 128 3.14e-59 186
Msa0933350 MtrunA17_Chr2g0293911 78.947 114 24 0 8 121 18 131 6.37e-58 185
Msa0933350 MtrunA17_Chr1g0194301 72.222 108 30 0 14 121 33 140 8.74e-58 183
Msa0933350 MtrunA17_Chr4g0068921 78.378 111 24 0 11 121 21 131 2.27e-56 177
Msa0933350 MtrunA17_Chr1g0168661 69.524 105 32 0 15 119 22 126 8.27e-52 167
Msa0933350 MtrunA17_Chr1g0186061 66.667 105 35 0 15 119 21 125 1.74e-49 161
Msa0933350 MtrunA17_Chr4g0039971 58.678 121 48 1 1 121 2 120 1.71e-46 156
Msa0933350 MtrunA17_Chr4g0068061 45.455 176 92 2 1 176 1 172 2.68e-46 155
Msa0933350 MtrunA17_Chr7g0275911 60.504 119 45 1 1 119 1 117 3.12e-46 153
Msa0933350 MtrunA17_Chr5g0410961 58.678 121 48 1 1 121 1 119 6.10e-46 155
Msa0933350 MtrunA17_Chr2g0327821 60.577 104 41 0 13 116 5 108 1.11e-45 151
Msa0933350 MtrunA17_Chr2g0330041 60.909 110 43 0 13 122 11 120 1.29e-45 155
Msa0933350 MtrunA17_Chr4g0070641 47.826 161 80 2 1 159 1 159 1.92e-45 148
Msa0933350 MtrunA17_Chr4g0070611 55.469 128 55 1 1 128 1 126 2.44e-45 152
Msa0933350 MtrunA17_Chr8g0346561 58.333 120 48 1 1 120 1 118 5.21e-45 151
Msa0933350 MtrunA17_Chr8g0385321 61.017 118 44 1 1 118 1 116 5.23e-45 152
Msa0933350 MtrunA17_Chr4g0037141 45.902 183 83 5 1 175 1 175 6.52e-45 150
Msa0933350 MtrunA17_Chr7g0261281 54.198 131 58 1 1 131 1 129 6.68e-45 150
Msa0933350 MtrunA17_Chr3g0131121 60.169 118 45 1 1 118 1 116 2.06e-44 149
Msa0933350 MtrunA17_Chr2g0323411 58.475 118 47 1 1 118 1 116 2.11e-44 150
Msa0933350 MtrunA17_Chr1g0167661 47.561 164 71 4 1 159 1 154 2.14e-44 148
Msa0933350 MtrunA17_Chr1g0203411 55.833 120 51 1 1 120 1 118 3.39e-44 149
Msa0933350 MtrunA17_Chr8g0349261 57.983 119 48 2 1 118 1 118 3.52e-44 149
Msa0933350 MtrunA17_Chr5g0395281 57.895 114 48 0 8 121 6 119 4.64e-44 149
Msa0933350 MtrunA17_Chr7g0274581 50.370 135 65 1 1 135 1 133 6.47e-44 145
Msa0933350 MtrunA17_Chr1g0193371 46.512 172 82 4 1 164 1 170 7.86e-44 150
Msa0933350 MtrunA17_Chr1g0187761 55.738 122 52 1 1 122 1 120 8.60e-44 147
Msa0933350 MtrunA17_Chr3g0115821 55.372 121 52 1 1 121 1 119 9.72e-44 149
Msa0933350 MtrunA17_Chr4g0032401 48.428 159 72 3 13 161 16 174 1.43e-43 148
Msa0933350 MtrunA17_Chr4g0030881 57.522 113 41 1 15 120 8 120 1.57e-43 146
Msa0933350 MtrunA17_Chr1g0180391 60.377 106 42 0 14 119 19 124 1.68e-43 145
Msa0933350 MtrunA17_Chr2g0281071 56.780 118 50 1 1 118 1 117 1.88e-43 148
Msa0933350 MtrunA17_Chr8g0387421 55.833 120 51 1 1 120 1 118 3.13e-43 147
Msa0933350 MtrunA17_Chr1g0167691 55.932 118 50 1 1 118 1 116 3.67e-43 145
Msa0933350 MtrunA17_Chr7g0228891 56.303 119 50 1 1 119 1 117 5.96e-43 145
Msa0933350 MtrunA17_Chr3g0110351 55.372 121 52 1 1 121 1 119 6.41e-43 146
Msa0933350 MtrunA17_Chr5g0434571 55.372 121 52 1 1 121 37 155 9.86e-43 147
Msa0933350 MtrunA17_Chr5g0435101 56.034 116 49 1 3 118 2 115 1.06e-42 142
Msa0933350 MtrunA17_Chr8g0342541 60.377 106 42 0 13 118 11 116 1.12e-42 146
Msa0933350 MtrunA17_Chr4g0057031 55.372 121 52 1 1 121 1 119 1.62e-42 144
Msa0933350 MtrunA17_Chr8g0354661 61.165 103 40 0 14 116 37 139 1.80e-42 150
Msa0933350 MtrunA17_Chr4g0048511 55.932 118 51 1 1 118 1 117 2.76e-42 145
Msa0933350 MtrunA17_Chr3g0099131 57.944 107 45 0 14 120 41 147 3.05e-42 149
Msa0933350 MtrunA17_Chr7g0217741 53.719 121 54 1 1 121 1 119 4.82e-42 144
Msa0933350 MtrunA17_Chr8g0342521 60.377 106 42 0 13 118 11 116 5.94e-42 144
Msa0933350 MtrunA17_Chr4g0044421 57.627 118 48 1 1 118 1 116 6.94e-42 140
Msa0933350 MtrunA17_Chr3g0121241 57.895 114 46 1 5 118 35 146 8.40e-42 143
Msa0933350 MtrunA17_Chr7g0270891 55.000 120 52 1 1 120 1 118 8.58e-42 144
Msa0933350 MtrunA17_Chr2g0309911 56.637 113 47 1 6 118 5 115 1.30e-41 143
Msa0933350 MtrunA17_Chr3g0080861 55.660 106 47 0 14 119 37 142 1.54e-41 147
Msa0933350 MtrunA17_Chr2g0328771 56.481 108 47 0 14 121 20 127 1.64e-41 142
Msa0933350 MtrunA17_Chr5g0397231 62.000 100 38 0 13 112 11 110 1.66e-41 143
Msa0933350 MtrunA17_Chr1g0193801 55.000 120 52 1 1 120 1 118 1.83e-41 144
Msa0933350 MtrunA17_Chr1g0151941 52.941 119 53 2 1 118 1 117 1.96e-41 140
Msa0933350 MtrunA17_Chr1g0154031 61.165 103 40 0 14 116 76 178 3.92e-41 144
Msa0933350 MtrunA17_Chr8g0343831 58.333 108 45 0 13 120 7 114 9.63e-41 139
Msa0933350 MtrunA17_Chr3g0088461 53.448 116 54 0 4 119 12 127 1.10e-40 141
Msa0933350 MtrunA17_Chr6g0453471 52.893 121 55 1 1 121 1 119 1.42e-40 141
Msa0933350 MtrunA17_Chr1g0211161 40.887 203 98 6 13 195 12 212 1.47e-40 137
Msa0933350 MtrunA17_Chr4g0022931 58.491 106 44 0 14 119 13 118 1.79e-40 139
Msa0933350 MtrunA17_Chr3g0117091 53.333 120 54 1 1 120 1 118 3.29e-40 140
Msa0933350 MtrunA17_Chr1g0194951 55.932 118 50 1 1 118 1 116 3.59e-40 140
Msa0933350 MtrunA17_Chr7g0271241 59.091 110 43 1 1 110 1 108 3.88e-40 140
Msa0933350 MtrunA17_Chr6g0452271 51.240 121 57 1 1 121 1 119 4.03e-40 139
Msa0933350 MtrunA17_Chr3g0092401 49.219 128 63 1 1 128 2 127 4.53e-40 139
Msa0933350 MtrunA17_Chr7g0254411 43.137 153 75 2 1 143 1 151 8.04e-40 139
Msa0933350 MtrunA17_Chr4g0042671 52.893 121 55 1 1 121 1 119 8.80e-40 140
Msa0933350 MtrunA17_Chr7g0217221 50.833 120 57 1 1 120 1 118 9.80e-40 137
Msa0933350 MtrunA17_Chr4g0022901 61.165 103 40 0 14 116 13 115 1.03e-39 137
Msa0933350 MtrunA17_Chr4g0022911 46.053 152 68 2 14 165 13 150 1.27e-39 137
Msa0933350 MtrunA17_Chr1g0203441 54.545 110 50 0 12 121 11 120 1.37e-39 136
Msa0933350 MtrunA17_Chr8g0342481 55.856 111 48 1 13 122 11 121 3.25e-39 139
Msa0933350 MtrunA17_Chr2g0323351 59.048 105 43 0 14 118 12 116 4.59e-39 134
Msa0933350 MtrunA17_Chr4g0058631 53.390 118 53 1 1 118 1 116 4.85e-39 137
Msa0933350 MtrunA17_Chr4g0022881 57.547 106 45 0 14 119 12 117 6.00e-39 134
Msa0933350 MtrunA17_Chr2g0311221 57.944 107 42 1 6 112 9 112 9.15e-39 135
Msa0933350 MtrunA17_Chr4g0060721 50.000 120 58 1 1 120 2 119 2.12e-38 135
Msa0933350 MtrunA17_Chr7g0269831 50.758 132 63 1 1 132 1 130 6.32e-38 134
Msa0933350 MtrunA17_Chr6g0453211 53.571 112 50 1 1 112 1 110 7.57e-38 133
Msa0933350 MtrunA17_Chr4g0028311 50.400 125 59 2 1 124 1 123 1.17e-37 133
Msa0933350 MtrunA17_Chr7g0264641 47.407 135 68 2 1 134 1 133 1.18e-37 131
Msa0933350 MtrunA17_Chr6g0470971 55.140 107 48 0 10 116 10 116 1.87e-37 131
Msa0933350 MtrunA17_Chr2g0322521 58.252 103 43 0 14 116 29 131 2.81e-37 133
Msa0933350 MtrunA17_Chr1g0192411 50.000 126 56 1 7 125 5 130 7.39e-37 132
Msa0933350 MtrunA17_Chr5g0440781 41.916 167 86 4 13 178 11 167 9.85e-37 127
Msa0933350 MtrunA17_Chr4g0055981 50.420 119 59 0 16 134 57 175 1.05e-36 128
Msa0933350 MtrunA17_Chr5g0400821 37.799 209 105 6 1 199 1 194 1.75e-36 129
Msa0933350 MtrunA17_Chr3g0135311 52.101 119 54 2 1 118 1 117 2.22e-36 130
Msa0933350 MtrunA17_Chr2g0327351 54.867 113 48 2 1 112 1 111 2.76e-36 129
Msa0933350 MtrunA17_Chr4g0022891 54.902 102 46 0 14 115 12 113 3.41e-36 127
Msa0933350 MtrunA17_Chr1g0152011 52.101 119 54 2 1 118 1 117 3.93e-36 129
Msa0933350 MtrunA17_Chr3g0103281 46.377 138 70 2 1 136 1 136 5.10e-36 128
Msa0933350 MtrunA17_Chr5g0440761 41.916 167 86 4 13 178 11 167 5.94e-36 127
Msa0933350 MtrunA17_Chr5g0441141 41.916 167 86 4 13 178 11 167 6.67e-36 127
Msa0933350 MtrunA17_Chr5g0417821 53.636 110 51 0 9 118 2 111 2.16e-34 123
Msa0933350 MtrunA17_Chr5g0441131 43.836 146 78 2 8 152 3 145 2.38e-34 120
Msa0933350 MtrunA17_Chr7g0240821 33.778 225 112 5 18 207 5 227 6.85e-34 120
Msa0933350 MtrunA17_Chr4g0072751 53.097 113 50 2 1 112 1 111 7.07e-34 123
Msa0933350 MtrunA17_Chr8g0334881 49.541 109 53 2 14 121 10 117 9.52e-34 122
Msa0933350 MtrunA17_Chr4g0054391 53.153 111 49 2 1 110 1 109 1.02e-33 122
Msa0933350 MtrunA17_Chr6g0487491 48.800 125 53 3 1 116 1 123 1.95e-32 117
Msa0933350 MtrunA17_Chr7g0247131 64.474 76 27 0 46 121 10 85 4.32e-32 117
Msa0933350 MtrunA17_Chr8g0360111 53.465 101 47 0 14 114 25 125 1.04e-31 115
Msa0933350 MtrunA17_Chr5g0434931 47.009 117 62 0 2 118 23 139 1.47e-31 116
Msa0933350 MtrunA17_Chr4g0013361 46.154 104 55 1 14 116 10 113 2.07e-31 115
Msa0933350 MtrunA17_Chr5g0434831 50.476 105 52 0 14 118 7 111 5.59e-31 112
Msa0933350 MtrunA17_Chr5g0434911 50.476 105 52 0 14 118 21 125 6.01e-31 114
Msa0933350 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 37 121 1.31e-30 109
Msa0933350 MtrunA17_Chr7g0228991 50.476 105 52 0 14 118 29 133 1.91e-30 113
Msa0933350 MtrunA17_Chr7g0220341 49.533 107 52 1 14 118 25 131 6.78e-30 111
Msa0933350 MtrunA17_Chr2g0294811 56.667 90 37 1 1 90 1 88 1.07e-29 106
Msa0933350 MtrunA17_Chr5g0434841 49.524 105 53 0 14 118 20 124 1.44e-29 111
Msa0933350 MtrunA17_Chr2g0323321 52.128 94 42 1 1 94 1 91 2.99e-27 100
Msa0933350 MtrunA17_Chr4g0042611 52.222 90 41 1 1 90 1 88 3.56e-27 99.4
Msa0933350 MtrunA17_Chr8g0342531 51.648 91 42 1 1 91 1 89 7.14e-27 100
Msa0933350 MtrunA17_Chr8g0342511 51.685 89 41 1 1 89 1 87 7.93e-27 98.6
Msa0933350 MtrunA17_Chr7g0238631 46.296 108 57 1 11 118 108 214 2.25e-26 105
Msa0933350 MtrunA17_Chr7g0238631 37.736 106 64 2 16 120 61 165 3.77e-12 64.7
Msa0933350 MtrunA17_Chr4g0008551 46.789 109 56 2 16 123 38 145 4.89e-26 102
Msa0933350 MtrunA17_Chr6g0454921 50.526 95 46 1 16 110 15 108 7.51e-26 99.4
Msa0933350 MtrunA17_Chr8g0342461 53.750 80 36 1 13 91 11 90 3.13e-25 95.9
Msa0933350 MtrunA17_Chr5g0395221 53.247 77 36 0 14 90 12 88 5.17e-25 93.6
Msa0933350 MtrunA17_Chr8g0342471 53.750 80 36 1 13 91 11 90 7.23e-25 94.7
Msa0933350 MtrunA17_Chr5g0425591 47.778 90 46 1 7 95 2 91 7.74e-25 93.2
Msa0933350 MtrunA17_Chr5g0429661 43.590 117 62 3 16 130 122 236 9.81e-25 99.4
Msa0933350 MtrunA17_Chr5g0401731 44.340 106 58 1 16 121 15 119 9.84e-25 99.0
Msa0933350 MtrunA17_Chr3g0139671 40.741 108 63 1 11 118 80 186 3.13e-24 99.8
Msa0933350 MtrunA17_Chr3g0133601 44.118 102 56 1 16 117 37 137 4.21e-24 95.1
Msa0933350 MtrunA17_Chr1g0157731 40.741 108 63 1 11 118 86 192 5.50e-24 99.0
Msa0933350 MtrunA17_Chr4g0053431 33.750 160 100 2 16 175 5 158 6.17e-24 95.9
Msa0933350 MtrunA17_Chr6g0460661 45.263 95 51 1 16 110 16 109 3.22e-23 91.3
Msa0933350 MtrunA17_Chr4g0058991 45.918 98 50 2 14 110 207 302 1.53e-22 94.4
Msa0933350 MtrunA17_Chr3g0117511 40.741 108 63 1 3 110 170 276 2.25e-22 94.0
Msa0933350 MtrunA17_Chr6g0480581 34.270 178 101 6 16 185 4 173 2.45e-22 90.9
Msa0933350 MtrunA17_Chr5g0417621 34.375 160 100 3 4 162 122 277 5.04e-22 92.8
Msa0933350 MtrunA17_Chr6g0453751 47.253 91 39 2 14 95 20 110 2.58e-21 85.5
Msa0933350 MtrunA17_Chr5g0437321 43.434 99 55 1 16 114 19 116 1.63e-20 87.0
Msa0933350 MtrunA17_Chr7g0228531 43.363 113 60 3 10 120 214 324 2.33e-20 88.2
Msa0933350 MtrunA17_Chr7g0229101 54.286 70 32 0 46 115 4 73 4.27e-20 84.3
Msa0933350 MtrunA17_Chr5g0416341 40.541 111 65 1 19 129 29 138 4.90e-20 87.4
Msa0933350 MtrunA17_Chr3g0093811 50.000 76 38 0 46 121 14 89 7.40e-20 84.7
Msa0933350 MtrunA17_Chr7g0238651 28.249 177 98 4 19 193 10 159 1.09e-19 85.5
Msa0933350 MtrunA17_Chr4g0042501 34.104 173 101 6 16 179 105 273 1.09e-19 86.3
Msa0933350 MtrunA17_Chr8g0362231 42.574 101 57 1 19 119 25 124 2.53e-19 85.1
Msa0933350 MtrunA17_Chr5g0434901 54.412 68 31 0 48 115 7 74 4.26e-19 79.3
Msa0933350 MtrunA17_Chr7g0229131 47.945 73 38 0 46 118 4 76 8.63e-19 80.1
Msa0933350 MtrunA17_Chr5g0397841 41.837 98 56 1 13 110 107 203 1.72e-18 82.8
Msa0933350 MtrunA17_Chr5g0397841 33.945 109 69 2 15 120 54 162 2.18e-11 62.4
Msa0933350 MtrunA17_Chr7g0228401 37.500 104 63 2 25 128 288 389 4.45e-18 81.6
Msa0933350 MtrunA17_Chr1g0177901 44.186 86 47 1 25 110 3 87 5.02e-18 79.0
Msa0933350 MtrunA17_Chr3g0125801 36.567 134 81 3 1 132 1 132 2.06e-17 78.6
Msa0933350 MtrunA17_Chr7g0228481 40.594 101 58 2 10 110 214 312 8.75e-17 77.8
Msa0933350 MtrunA17_Chr6g0460671 36.792 106 66 1 16 121 99 203 1.45e-16 77.0
Msa0933350 MtrunA17_Chr7g0233061 42.000 100 49 3 16 112 180 273 1.51e-16 77.0
Msa0933350 MtrunA17_Chr7g0254261 41.053 95 55 1 16 110 89 182 2.27e-16 76.3
Msa0933350 MtrunA17_Chr1g0193901 44.086 93 50 2 5 95 2 94 1.20e-15 70.1
Msa0933350 MtrunA17_Chr1g0193891 44.086 93 50 2 5 95 2 94 1.20e-15 70.1
Msa0933350 MtrunA17_Chr1g0193871 44.086 93 50 2 5 95 2 94 1.20e-15 70.1
Msa0933350 MtrunA17_Chr1g0193881 44.086 93 50 2 5 95 2 94 1.20e-15 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0933350 AT3G27810.1 66.981 212 54 7 11 208 17 226 4.62e-90 264
Msa0933350 AT5G40350.1 62.069 203 70 2 11 208 14 214 5.28e-84 248
Msa0933350 AT3G01530.1 60.287 209 61 6 4 208 12 202 1.94e-77 231
Msa0933350 AT3G27810.2 62.500 176 50 7 47 208 4 177 1.23e-63 195
Msa0933350 AT1G25340.1 68.293 123 38 1 1 122 4 126 1.19e-61 194
Msa0933350 AT1G68320.1 74.107 112 29 0 11 122 16 127 1.24e-61 194
Msa0933350 AT1G48000.1 73.832 107 28 0 13 119 31 137 2.77e-59 186
Msa0933350 AT2G47190.1 70.536 112 33 0 10 121 16 127 6.99e-58 184
Msa0933350 AT5G49620.1 80.357 112 22 0 10 121 22 133 1.06e-56 182
Msa0933350 AT5G40350.2 55.090 167 68 2 47 208 5 169 3.20e-56 176
Msa0933350 AT1G25340.2 65.041 123 37 2 1 122 4 121 4.31e-56 179
Msa0933350 AT1G25340.3 65.041 123 37 2 1 122 4 121 7.40e-56 179
Msa0933350 AT3G06490.1 73.913 115 30 0 7 121 12 126 4.67e-54 176
Msa0933350 AT5G49620.2 71.429 126 22 1 10 121 22 147 4.80e-53 173
Msa0933350 AT3G24310.1 71.429 105 30 0 15 119 19 123 3.21e-52 169
Msa0933350 AT4G13480.1 66.102 118 36 1 15 132 7 120 3.21e-52 169
Msa0933350 AT3G30210.1 64.762 105 37 0 15 119 28 132 1.99e-49 162
Msa0933350 AT5G59780.3 59.821 112 45 0 13 124 7 118 3.51e-48 158
Msa0933350 AT1G22640.1 42.788 208 98 7 1 204 1 191 4.65e-48 158
Msa0933350 AT3G46130.1 60.000 110 44 0 15 124 10 119 1.42e-47 157
Msa0933350 AT3G02940.2 58.678 121 48 1 1 121 1 119 1.34e-45 153
Msa0933350 AT5G14750.1 48.077 156 75 2 3 152 2 157 1.43e-45 150
Msa0933350 AT3G02940.1 58.678 121 48 1 1 121 1 119 2.38e-45 153
Msa0933350 AT3G02940.3 58.678 121 48 1 1 121 1 119 2.38e-45 153
Msa0933350 AT2G47460.1 59.322 118 46 1 1 118 1 116 6.14e-45 153
Msa0933350 AT3G13890.2 61.321 106 41 0 13 118 11 116 7.16e-45 152
Msa0933350 AT1G09540.1 59.167 120 47 1 1 120 1 118 7.83e-45 153
Msa0933350 AT4G09460.1 57.627 118 48 1 1 118 1 116 1.24e-44 149
Msa0933350 AT1G35515.1 57.627 118 48 1 1 118 1 116 2.66e-44 147
Msa0933350 AT4G38620.1 59.322 118 46 1 1 118 1 116 3.30e-44 149
Msa0933350 AT1G57560.1 50.331 151 71 2 1 149 1 149 3.37e-44 150
Msa0933350 AT1G06180.1 58.475 118 47 1 1 118 1 116 3.44e-44 148
Msa0933350 AT5G65230.1 59.649 114 46 0 8 121 6 119 5.17e-44 149
Msa0933350 AT2G31180.1 57.500 120 49 1 1 120 1 118 6.76e-44 147
Msa0933350 AT1G57560.2 59.322 118 46 1 1 118 1 116 7.42e-44 148
Msa0933350 AT5G40330.1 56.522 115 50 0 9 123 7 121 7.81e-44 146
Msa0933350 AT5G26660.1 41.837 196 104 3 1 188 1 194 9.39e-44 150
Msa0933350 AT5G16770.4 56.198 121 51 1 1 121 1 119 9.86e-44 149
Msa0933350 AT5G16770.3 56.198 121 51 1 1 121 1 119 9.86e-44 149
Msa0933350 AT2G16720.1 57.627 118 48 1 1 118 1 116 1.17e-43 147
Msa0933350 AT5G10280.1 54.545 121 53 1 1 121 1 119 1.67e-43 149
Msa0933350 AT5G16770.1 56.198 121 51 1 1 121 1 119 1.99e-43 148
Msa0933350 AT5G16770.2 56.198 121 51 1 1 121 1 119 1.99e-43 148
Msa0933350 AT3G01140.2 54.545 132 53 2 1 127 1 130 2.21e-43 149
Msa0933350 AT4G34990.1 57.627 118 48 1 1 118 1 116 2.46e-43 146
Msa0933350 AT4G17785.2 58.678 121 49 1 1 121 1 120 3.02e-43 148
Msa0933350 AT5G54230.1 51.351 148 61 2 14 156 12 153 3.12e-43 147
Msa0933350 AT4G21440.1 56.780 118 49 1 1 118 1 116 3.74e-43 148
Msa0933350 AT3G13540.1 47.239 163 76 3 3 159 7 165 4.32e-43 145
Msa0933350 AT5G60890.1 50.714 140 62 2 1 135 1 138 4.60e-43 146
Msa0933350 AT4G17785.1 58.678 121 49 1 1 121 1 120 4.60e-43 148
Msa0933350 AT5G61420.2 54.167 120 53 1 1 120 1 118 4.65e-43 148
Msa0933350 AT5G07690.1 56.897 116 48 1 1 116 1 114 4.93e-43 147
Msa0933350 AT3G23250.1 55.462 119 51 1 1 119 1 117 5.57e-43 146
Msa0933350 AT3G62610.1 56.780 118 49 1 1 118 1 116 6.48e-43 147
Msa0933350 AT1G63910.1 58.559 111 46 0 13 123 11 121 9.07e-43 147
Msa0933350 AT4G12350.1 55.738 122 52 1 1 122 1 120 1.29e-42 145
Msa0933350 AT4G22680.1 55.372 121 52 1 1 121 1 119 2.00e-42 144
Msa0933350 AT5G14340.1 56.198 121 51 1 1 121 13 131 2.36e-42 144
Msa0933350 AT5G49330.1 56.780 118 49 1 1 118 1 116 2.67e-42 145
Msa0933350 AT4G28110.1 57.627 118 48 1 1 118 1 116 2.70e-42 144
Msa0933350 AT4G05100.1 55.372 121 53 1 1 121 1 120 2.94e-42 145
Msa0933350 AT2G32460.1 48.438 128 66 0 14 141 18 145 4.20e-42 148
Msa0933350 AT2G32460.2 48.438 128 66 0 14 141 6 133 4.24e-42 148
Msa0933350 AT1G34670.1 55.372 121 52 1 1 121 1 119 4.66e-42 145
Msa0933350 AT3G27920.1 54.464 112 51 0 7 118 7 118 4.96e-42 142
Msa0933350 AT3G01140.1 57.983 119 45 1 14 127 55 173 5.63e-42 146
Msa0933350 AT3G11440.2 59.223 103 42 0 14 116 41 143 6.06e-42 147
Msa0933350 AT5G07700.1 46.250 160 67 3 14 156 12 169 6.38e-42 144
Msa0933350 AT5G07700.2 46.250 160 67 3 14 156 12 169 6.38e-42 144
Msa0933350 AT3G13890.1 56.522 115 41 1 13 118 11 125 7.19e-42 145
Msa0933350 AT5G16600.1 54.545 121 53 1 1 121 1 119 8.41e-42 144
Msa0933350 AT1G16490.1 56.034 116 49 1 3 118 5 118 9.61e-42 142
Msa0933350 AT1G66230.1 52.893 121 55 1 1 121 1 119 1.09e-41 142
Msa0933350 AT1G79180.1 55.085 118 51 1 3 120 5 120 1.12e-41 143
Msa0933350 AT5G15310.4 54.545 121 53 1 1 121 1 119 1.41e-41 141
Msa0933350 AT5G06100.1 60.194 103 41 0 14 116 32 134 1.44e-41 146
Msa0933350 AT5G12870.1 53.448 116 54 0 6 121 10 125 1.46e-41 142
Msa0933350 AT1G08810.1 41.317 167 90 2 1 161 1 165 1.81e-41 142
Msa0933350 AT3G08500.1 57.407 108 46 0 12 119 28 135 2.45e-41 143
Msa0933350 AT5G15310.2 54.545 121 53 1 1 121 1 119 2.67e-41 142
Msa0933350 AT5G15310.1 54.545 121 53 1 1 121 1 119 2.69e-41 142
Msa0933350 AT3G61250.1 54.237 118 52 1 1 118 1 116 2.70e-41 142
Msa0933350 AT1G18570.1 55.932 118 51 1 1 118 1 117 2.93e-41 143
Msa0933350 AT3G11440.3 59.223 103 42 0 14 116 41 143 3.09e-41 147
Msa0933350 AT3G11440.4 59.223 103 42 0 14 116 41 143 3.09e-41 147
Msa0933350 AT3G11440.1 59.223 103 42 0 14 116 41 143 3.09e-41 147
Msa0933350 AT4G01680.3 54.622 119 52 1 1 119 1 117 6.28e-41 139
Msa0933350 AT5G06100.5 60.194 103 41 0 14 116 32 134 6.74e-41 145
Msa0933350 AT5G06100.2 60.194 103 41 0 14 116 32 134 6.74e-41 145
Msa0933350 AT5G06100.3 60.194 103 41 0 14 116 32 134 6.74e-41 145
Msa0933350 AT5G06100.4 60.194 103 41 0 14 116 32 134 6.74e-41 145
Msa0933350 AT5G35550.1 55.932 118 52 0 1 118 1 118 7.90e-41 139
Msa0933350 AT4G26930.1 55.140 107 48 0 14 120 19 125 1.25e-40 142
Msa0933350 AT3G53200.1 57.944 107 45 0 10 116 5 111 1.27e-40 138
Msa0933350 AT4G01680.1 54.622 119 52 1 1 119 1 117 1.90e-40 140
Msa0933350 AT1G56160.1 55.172 116 50 1 3 118 5 118 1.94e-40 139
Msa0933350 AT3G47600.1 46.405 153 72 3 1 145 1 151 2.09e-40 140
Msa0933350 AT3G12720.1 56.604 106 46 0 13 118 21 126 2.18e-40 140
Msa0933350 AT5G62470.2 51.639 122 57 1 1 122 1 120 3.03e-40 140
Msa0933350 AT5G52600.1 57.282 103 44 0 14 116 12 114 7.82e-40 135
Msa0933350 AT5G55020.1 54.206 107 49 0 14 120 26 132 1.17e-39 142
Msa0933350 AT5G62320.1 44.720 161 72 4 3 148 4 162 1.78e-39 135
Msa0933350 AT1G74650.1 53.390 118 53 1 1 118 1 116 1.83e-39 138
Msa0933350 AT1G74080.1 55.172 116 50 1 1 116 1 114 5.35e-39 137
Msa0933350 AT2G26960.1 56.436 101 44 0 16 116 22 122 1.66e-38 137
Msa0933350 AT1G74430.1 57.009 107 46 0 14 120 12 118 1.85e-38 134
Msa0933350 AT4G37780.1 51.938 129 57 3 1 126 1 127 2.54e-38 134
Msa0933350 AT3G28910.1 50.407 123 59 1 1 123 1 121 2.57e-38 135
Msa0933350 AT5G62470.1 51.639 122 56 2 1 122 1 119 2.98e-38 135
Msa0933350 AT3G12820.1 54.867 113 48 1 6 118 9 118 3.47e-37 129
Msa0933350 AT4G01680.2 49.618 131 52 2 1 119 1 129 5.54e-37 132
Msa0933350 AT5G23000.1 51.261 119 55 2 1 118 1 117 7.75e-37 131
Msa0933350 AT3G49690.1 52.101 119 54 2 1 118 1 117 1.70e-36 130
Msa0933350 AT5G57620.1 50.420 119 56 2 1 118 1 117 4.29e-36 129
Msa0933350 AT2G36890.1 50.400 125 59 2 1 124 1 123 9.08e-36 127
Msa0933350 AT5G65790.1 51.261 119 55 2 1 118 1 117 1.17e-35 129
Msa0933350 AT5G56110.1 43.226 155 82 3 1 153 1 151 1.60e-35 127
Msa0933350 AT2G36890.2 50.400 125 59 2 1 124 42 164 1.95e-35 127
Msa0933350 AT3G28470.1 51.786 112 52 1 1 112 1 110 2.24e-35 127
Msa0933350 AT1G79180.2 43.046 151 51 2 3 120 5 153 5.47e-35 126
Msa0933350 AT4G25560.1 52.941 102 48 0 15 116 11 112 1.11e-34 124
Msa0933350 AT3G46130.3 65.000 80 28 0 45 124 8 87 1.14e-34 123
Msa0933350 AT1G18710.1 54.206 107 49 0 14 120 12 118 1.25e-34 124
Msa0933350 AT5G59780.2 66.667 78 26 0 47 124 20 97 1.45e-34 122
Msa0933350 AT5G52260.1 53.922 102 47 0 15 116 13 114 1.71e-34 123
Msa0933350 AT3G48920.1 45.600 125 64 1 15 135 19 143 1.78e-34 123
Msa0933350 AT3G46130.4 66.667 78 26 0 47 124 20 97 2.48e-34 122
Msa0933350 AT3G60460.1 47.321 112 57 2 13 123 10 120 3.40e-34 124
Msa0933350 AT1G66370.1 42.857 140 75 1 14 153 8 142 1.61e-33 120
Msa0933350 AT3G53200.2 67.143 70 23 0 47 116 9 78 5.06e-30 110
Msa0933350 AT5G26660.2 63.514 74 27 0 47 120 14 87 1.06e-29 112
Msa0933350 AT2G26950.1 35.714 168 91 3 16 166 18 185 1.45e-29 113
Msa0933350 AT1G66380.1 52.427 103 49 0 14 116 8 110 1.93e-29 107
Msa0933350 AT1G56650.1 52.427 103 49 0 14 116 8 110 9.38e-29 108
Msa0933350 AT5G14750.3 44.538 119 58 2 42 152 5 123 4.15e-28 104
Msa0933350 AT1G66390.1 52.427 103 49 0 14 116 8 110 6.32e-28 106
Msa0933350 AT5G35550.2 62.338 77 29 0 42 118 45 121 4.59e-27 104
Msa0933350 AT3G12820.2 62.319 69 26 0 50 118 2 70 5.01e-26 99.8
Msa0933350 AT3G47600.2 46.729 107 49 2 47 145 39 145 1.19e-25 101
Msa0933350 AT3G27785.1 42.593 108 61 1 3 110 176 282 1.54e-25 102
Msa0933350 AT5G02320.1 44.037 109 60 1 11 119 122 229 3.70e-25 102
Msa0933350 AT5G02320.2 44.037 109 60 1 11 119 122 229 3.70e-25 102
Msa0933350 AT5G11510.3 42.593 108 61 1 11 118 76 182 3.85e-25 102
Msa0933350 AT5G11510.1 42.593 108 61 1 11 118 76 182 3.85e-25 102
Msa0933350 AT5G11510.4 42.593 108 61 1 11 118 76 182 3.85e-25 102
Msa0933350 AT5G11510.2 42.593 108 61 1 11 118 76 182 3.90e-25 102
Msa0933350 AT5G11510.5 42.593 108 61 1 11 118 76 182 4.06e-25 102
Msa0933350 AT5G02320.3 44.037 109 60 1 11 119 62 169 5.79e-25 101
Msa0933350 AT3G09230.1 38.889 144 82 3 16 159 55 192 2.15e-24 99.4
Msa0933350 AT3G09370.1 43.396 106 59 1 11 116 125 229 4.29e-24 99.4
Msa0933350 AT3G09370.2 43.396 106 59 1 11 116 130 234 4.36e-24 99.4
Msa0933350 AT3G09370.3 43.396 106 59 1 11 116 138 242 5.45e-24 99.4
Msa0933350 AT4G18770.1 46.316 95 50 1 16 110 217 310 1.43e-23 97.4
Msa0933350 AT5G58850.1 42.105 114 63 2 16 128 105 216 1.46e-23 97.4
Msa0933350 AT1G69560.1 36.842 133 81 2 4 135 95 225 6.98e-23 94.4
Msa0933350 AT2G23290.1 45.545 101 54 1 16 116 13 112 7.90e-23 94.0
Msa0933350 AT1G69560.2 36.842 133 81 2 4 135 111 241 8.67e-23 94.4
Msa0933350 AT4G32730.1 38.889 108 65 1 11 118 82 188 8.86e-23 95.9
Msa0933350 AT4G32730.5 38.889 108 65 1 11 118 82 188 9.75e-23 95.9
Msa0933350 AT4G32730.4 38.889 108 65 1 11 118 82 188 9.75e-23 95.9
Msa0933350 AT4G32730.3 38.889 108 65 1 11 118 82 188 9.75e-23 95.9
Msa0933350 AT4G32730.2 38.889 108 65 1 11 118 82 188 9.75e-23 95.9
Msa0933350 AT5G11050.1 40.517 116 66 2 14 128 103 216 1.39e-22 94.7
Msa0933350 AT3G55730.1 44.554 101 55 1 16 116 56 155 3.32e-22 93.6
Msa0933350 AT4G37260.1 43.564 101 56 1 16 116 13 112 8.68e-22 91.3
Msa0933350 AT5G67300.1 41.667 108 62 1 16 123 6 112 1.02e-21 90.9
Msa0933350 AT1G22640.3 37.584 149 74 6 60 204 1 134 1.10e-21 88.6
Msa0933350 AT3G50060.1 42.157 102 58 1 16 117 6 106 1.28e-21 90.5
Msa0933350 AT2G39880.1 45.545 101 54 1 16 116 50 149 1.51e-21 91.3
Msa0933350 AT5G40360.1 42.268 97 55 1 14 110 156 251 1.94e-21 90.9
Msa0933350 AT3G29020.1 34.921 126 81 1 16 141 65 189 2.72e-21 88.2
Msa0933350 AT3G29020.2 34.921 126 81 1 16 141 67 191 4.32e-21 89.4
Msa0933350 AT1G26780.1 40.566 106 60 2 16 120 98 201 5.79e-20 85.9
Msa0933350 AT1G14350.2 43.564 101 56 1 19 119 28 127 7.30e-20 87.0
Msa0933350 AT1G14350.1 43.564 101 56 1 19 119 28 127 7.30e-20 87.0
Msa0933350 AT1G26780.2 39.048 105 63 1 16 120 98 201 7.54e-20 86.7
Msa0933350 AT5G14750.4 42.708 96 52 1 60 152 1 96 9.13e-20 82.0
Msa0933350 AT5G14750.2 42.708 96 52 1 60 152 1 96 9.13e-20 82.0
Msa0933350 AT5G59780.1 64.151 53 19 0 72 124 1 53 1.44e-19 82.4
Msa0933350 AT3G23250.2 58.333 60 25 0 60 119 1 60 1.48e-19 83.6
Msa0933350 AT1G73410.1 41.818 110 61 2 16 124 6 113 2.40e-19 83.6
Msa0933350 AT3G46130.2 64.151 53 19 0 72 124 1 53 2.60e-19 82.0
Msa0933350 AT5G17800.1 36.036 111 70 1 16 126 93 202 2.81e-19 84.3
Msa0933350 AT4G00540.2 38.596 114 66 2 11 121 98 210 3.15e-19 85.1
Msa0933350 AT1G66380.3 52.632 76 36 0 41 116 2 77 5.36e-19 79.0
Msa0933350 AT1G17950.1 45.833 96 49 2 16 110 5 98 5.52e-19 82.4
Msa0933350 AT4G00540.1 38.596 114 66 2 11 121 96 208 5.70e-19 84.7
Msa0933350 AT1G73410.2 41.818 110 61 2 16 124 6 113 5.87e-19 81.6
Msa0933350 AT1G18960.1 37.273 110 64 3 16 123 10 116 8.41e-19 82.8
Msa0933350 AT2G25230.1 37.500 120 71 2 13 129 23 141 2.01e-18 80.9
Msa0933350 AT2G37630.1 37.500 104 63 1 19 120 7 110 3.49e-18 82.0
Msa0933350 AT4G33450.1 40.404 99 58 1 10 108 13 110 4.59e-18 80.1
Msa0933350 AT5G39700.1 38.679 106 64 1 15 120 55 159 6.16e-18 78.6
Msa0933350 AT1G66380.2 50.000 78 39 0 14 91 8 85 7.87e-18 76.3
Msa0933350 AT1G71030.2 32.258 155 82 3 53 199 5 144 8.89e-18 77.8
Msa0933350 AT1G71030.1 32.258 155 82 3 53 199 19 158 1.07e-17 77.8
Msa0933350 AT2G02820.2 42.574 101 57 1 19 119 33 132 1.26e-17 80.9
Msa0933350 AT2G02820.3 42.574 101 57 1 19 119 33 132 1.31e-17 80.1
Msa0933350 AT2G02820.1 42.574 101 57 1 19 119 33 132 1.38e-17 80.9
Msa0933350 AT5G40430.1 37.000 100 61 2 13 112 51 148 7.31e-14 68.6
Msa0933350 AT3G18100.4 38.776 98 59 1 14 111 383 479 1.75e-12 66.2
Msa0933350 AT3G18100.1 38.776 98 59 1 14 111 544 640 1.76e-12 66.2
Msa0933350 AT3G18100.3 38.776 98 59 1 14 111 496 592 2.08e-12 65.9
Msa0933350 AT1G14350.3 46.774 62 33 0 58 119 23 84 2.12e-12 65.5
Msa0933350 AT1G14350.4 46.774 62 33 0 58 119 23 84 2.12e-12 65.5
Msa0933350 AT3G18100.2 31.847 157 99 4 14 170 331 479 2.30e-12 65.9
Msa0933350 AT4G25560.2 55.556 45 20 0 72 116 2 46 7.79e-12 62.4

Find 50 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAGATGCTTTGCAATTT+TGG 0.072305 6_3:+1837097 None:intergenic
TCATTTGTTGGAAATTATTT+TGG 0.165796 6_3:+1836997 None:intergenic
ACAACAATAACAACAATTAT+TGG 0.250956 6_3:-1836812 Msa0933350:CDS
ATCAATTATATTGCAAATCA+TGG 0.336651 6_3:-1841339 Msa0933350:CDS
TTATCTCTAAACTCATTTGT+TGG 0.351444 6_3:+1836985 None:intergenic
CAAATCATGGTGAAGGTGTT+TGG 0.352640 6_3:-1841326 Msa0933350:CDS
ATCTCATTGTCAGTTCTTCC+TGG 0.357351 6_3:+1837077 None:intergenic
AACGTACAGGGAAAAGTTGC+AGG 0.359394 6_3:-1841144 Msa0933350:CDS
AAAGAAATTACCAGCAGCTT+TGG 0.368872 6_3:+1841293 None:intergenic
TTCATGCAAAGTGGGGAAAT+AGG 0.374488 6_3:-1841042 Msa0933350:intron
AAAATTGCAAAGCATCTTCC+AGG 0.422621 6_3:-1837095 Msa0933350:CDS
ATATTCCCTCTTCTAACATC+TGG 0.433582 6_3:+1841097 None:intergenic
ACCTTCGTACCAAGGAACTT+TGG 0.437744 6_3:-1836895 Msa0933350:CDS
CTTCTAGGTCTTAAACGTAC+AGG 0.438548 6_3:-1841157 Msa0933350:intron
TTCCATTGGCTCTACAATGT+TGG 0.446256 6_3:+1836929 None:intergenic
GCTCTACAATGTTGGAAACT+TGG 0.458115 6_3:+1836937 None:intergenic
ATTGGAGCATGGAGGACATC+TGG 0.463061 6_3:-1836794 Msa0933350:CDS
TTGATTGTTGGAAATTGAGC+TGG 0.465579 6_3:+1836864 None:intergenic
ATGATCAAAAGTTGTTCCTC+AGG 0.466285 6_3:+1841070 None:intergenic
GTTGGAAATTGAGCTGGAAA+TGG 0.472541 6_3:+1836870 None:intergenic
CAAGATCCTGAAGTGAGAAA+AGG 0.475828 6_3:-1841393 Msa0933350:CDS
AAGATCCTGAAGTGAGAAAA+GGG 0.481473 6_3:-1841392 Msa0933350:CDS
TTCCAACATTGTAGAGCCAA+TGG 0.503331 6_3:-1836931 Msa0933350:CDS
CATGGAACTTCATGCAAAGT+GGG 0.506898 6_3:-1841050 Msa0933350:CDS
GGAAAAGTTGCAGGCTTCGA+TGG 0.508279 6_3:-1841135 Msa0933350:CDS
TAAAATCAAGTCTTCTTCCA+TGG 0.509725 6_3:+1841362 None:intergenic
GTCATTTGTACAACAACTTG+AGG 0.527781 6_3:+1836833 None:intergenic
GAGGGATGATCATTGATTGT+TGG 0.530355 6_3:+1836852 None:intergenic
ATTACCAGCAGCTTTGGCTA+AGG 0.532999 6_3:+1841299 None:intergenic
TCATTTGTACAACAACTTGA+GGG 0.534266 6_3:+1836834 None:intergenic
GAAATGGCTCCAAAGTTCCT+TGG 0.536462 6_3:+1836886 None:intergenic
AATTCCTTAGCCAAAGCTGC+TGG 0.538366 6_3:-1841303 Msa0933350:intron
TTCTAGGTCTTAAACGTACA+GGG 0.540562 6_3:-1841156 Msa0933350:intron
TGGTCAATGCAATTACTCAA+TGG 0.546771 6_3:-1836774 Msa0933350:CDS
GGTGAAGAGTAAGTTTCCAT+TGG 0.558363 6_3:+1836915 None:intergenic
TATATTGCAAATCATGGTGA+AGG 0.567433 6_3:-1841333 Msa0933350:CDS
GAGAAAAGGGCCATGGACCA+TGG 0.571753 6_3:-1841379 Msa0933350:CDS
TACTCTTCACCTTCGTACCA+AGG 0.574362 6_3:-1836903 Msa0933350:CDS
CTGAAGTGAGAAAAGGGCCA+TGG 0.580790 6_3:-1841386 Msa0933350:CDS
AAGTCTTCTTCCATGGTCCA+TGG 0.582122 6_3:+1841369 None:intergenic
TCCAAAGTTCCTTGGTACGA+AGG 0.585025 6_3:+1836894 None:intergenic
TAACAACAATTATTGGAGCA+TGG 0.585348 6_3:-1836805 Msa0933350:CDS
TTCGTCCAGATGTTAGAAGA+GGG 0.588722 6_3:-1841102 Msa0933350:CDS
TCATGGAACTTCATGCAAAG+TGG 0.594009 6_3:-1841051 Msa0933350:CDS
CTTCGTCCAGATGTTAGAAG+AGG 0.620193 6_3:-1841103 Msa0933350:CDS
GGATCTTGAGATGAGTTACA+CGG 0.649211 6_3:+1841408 None:intergenic
CTCTTCTAACATCTGGACGA+AGG 0.659555 6_3:+1841104 None:intergenic
ATGGAACTTCATGCAAAGTG+GGG 0.673203 6_3:-1841049 Msa0933350:CDS
AAGAGGGAATATTACACCTG+AGG 0.685444 6_3:-1841086 Msa0933350:CDS
CAACAATTATTGGAGCATGG+AGG 0.738401 6_3:-1836802 Msa0933350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCAAAAAAATTATG+TGG - chr6_3:1837207-1837226 Msa0933350:intron 10.0%
!!! TTAATTTTTTGTTAAAGAAA+TGG - chr6_3:1837258-1837277 Msa0933350:intron 10.0%
!! AAATTAAAAATATATGAACT+AGG - chr6_3:1839153-1839172 Msa0933350:intron 10.0%
!! ATAAATAATATTTCAAAACT+TGG + chr6_3:1839823-1839842 None:intergenic 10.0%
!!! CTTTATTTTTTTTTTCTTCT+AGG - chr6_3:1837015-1837034 Msa0933350:CDS 15.0%
!! AAGAAAAAAGAAAAGAAAAA+AGG - chr6_3:1838981-1839000 Msa0933350:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr6_3:1839305-1839324 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr6_3:1839369-1839388 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr6_3:1839370-1839389 None:intergenic 15.0%
!! TTATTATATAGGAAAATGAA+TGG + chr6_3:1839473-1839492 None:intergenic 15.0%
!!! ATCATTGAAATATTTGAAAT+TGG - chr6_3:1840010-1840029 Msa0933350:intron 15.0%
!!! ATAACAATAGTCTTTTTATA+TGG - chr6_3:1840229-1840248 Msa0933350:intron 15.0%
!!! TAACAATAGTCTTTTTATAT+GGG - chr6_3:1840230-1840249 Msa0933350:intron 15.0%
!! TAGCAACAAAAATATTAAAT+AGG + chr6_3:1840321-1840340 None:intergenic 15.0%
!!! TAATTTACGTTTTTAAGTAT+TGG - chr6_3:1840759-1840778 Msa0933350:intron 15.0%
!! ATCAATTATATTGCAAATCA+TGG - chr6_3:1836848-1836867 Msa0933350:CDS 20.0%
!! TTTAAATATTACCCTAGTTA+GGG + chr6_3:1836991-1837010 None:intergenic 20.0%
!! ATTTAAATATTACCCTAGTT+AGG + chr6_3:1836992-1837011 None:intergenic 20.0%
!! AAAATTAAGATCTAGTAGTT+AGG + chr6_3:1837246-1837265 None:intergenic 20.0%
!! ATTTCATCTTTGTAAGATAA+AGG + chr6_3:1837329-1837348 None:intergenic 20.0%
!! TTACTTATATAATAAGGAGA+GGG + chr6_3:1837374-1837393 None:intergenic 20.0%
!!! ATCAGTTTCTATGTTTTTAA+AGG - chr6_3:1837518-1837537 Msa0933350:intron 20.0%
!! AGATATTGAATTAAGCAAAA+AGG + chr6_3:1837628-1837647 None:intergenic 20.0%
!! ATCTTCATTTATATTTCTCA+AGG + chr6_3:1837696-1837715 None:intergenic 20.0%
!! TTGAGAAATATAAATGAAGA+TGG - chr6_3:1837695-1837714 Msa0933350:intron 20.0%
!!! ATTTGTTTTCTTGAAAAGAA+GGG + chr6_3:1837862-1837881 None:intergenic 20.0%
!! GAAATAAATTAGAGAAAAGA+AGG + chr6_3:1837912-1837931 None:intergenic 20.0%
!! AAAAGATTGAAACCTATATA+AGG + chr6_3:1838037-1838056 None:intergenic 20.0%
!! TTAATCAACTTGTAGTAAAT+TGG - chr6_3:1838241-1838260 Msa0933350:intron 20.0%
!! AGAGAAAATGAAATGTAAAA+TGG - chr6_3:1838314-1838333 Msa0933350:intron 20.0%
!!! TTATTTTTCTTTGTAGGAAA+GGG + chr6_3:1838942-1838961 None:intergenic 20.0%
!! ATAGAGACAATAAAAAATGT+TGG - chr6_3:1839039-1839058 Msa0933350:intron 20.0%
!! AAAAATATATGAACTAGGAT+AGG - chr6_3:1839158-1839177 Msa0933350:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+AGG + chr6_3:1839235-1839254 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr6_3:1839368-1839387 None:intergenic 20.0%
!! GTTCTCAATCATTATTATAT+AGG + chr6_3:1839484-1839503 None:intergenic 20.0%
!! TTTAAGAGTCATAAAAGAAA+AGG - chr6_3:1839964-1839983 Msa0933350:intron 20.0%
!! ATTAATTAAAAGCTGTCAAA+TGG + chr6_3:1840370-1840389 None:intergenic 20.0%
!!! ACCATGTTCATTTTATAAAA+AGG - chr6_3:1840502-1840521 Msa0933350:intron 20.0%
!!! ACCTTTTTATAAAATGAACA+TGG + chr6_3:1840506-1840525 None:intergenic 20.0%
!!! TTTTCATCACTAATTTATGT+CGG + chr6_3:1840648-1840667 None:intergenic 20.0%
!!! ACAATGAGATTAAGAATTTT+TGG - chr6_3:1841123-1841142 Msa0933350:CDS 20.0%
!!! TCATTTGTTGGAAATTATTT+TGG + chr6_3:1841193-1841212 None:intergenic 20.0%
!! ACAACAATAACAACAATTAT+TGG - chr6_3:1841375-1841394 Msa0933350:CDS 20.0%
! CTTTGTAAGATAAAGGTTAA+TGG + chr6_3:1837322-1837341 None:intergenic 25.0%
! CTTACTTATATAATAAGGAG+AGG + chr6_3:1837375-1837394 None:intergenic 25.0%
! GTGTGCTTACTTATATAATA+AGG + chr6_3:1837380-1837399 None:intergenic 25.0%
!!! CTTCAAAATGATTTGTTTTG+TGG - chr6_3:1837541-1837560 Msa0933350:intron 25.0%
!! TTAAGAGAGTTTTCCTTTAA+AGG - chr6_3:1837585-1837604 Msa0933350:intron 25.0%
! CATATAACATGTACCTTTAA+AGG + chr6_3:1837601-1837620 None:intergenic 25.0%
!!! GATTTGTTTTCTTGAAAAGA+AGG + chr6_3:1837863-1837882 None:intergenic 25.0%
!!! AAACGTTTTAGCTTTACAAT+TGG - chr6_3:1838000-1838019 Msa0933350:intron 25.0%
!! CAAACAAATTAACTTGAGTT+TGG + chr6_3:1838187-1838206 None:intergenic 25.0%
! AAAAGAGATAGAGAGAATAA+AGG - chr6_3:1838824-1838843 Msa0933350:intron 25.0%
! AAAGAGATAGAGAGAATAAA+GGG - chr6_3:1838825-1838844 Msa0933350:intron 25.0%
! CATATAGTAAAAAACAGACT+TGG - chr6_3:1838898-1838917 Msa0933350:intron 25.0%
!!! CTTATTTTTCTTTGTAGGAA+AGG + chr6_3:1838943-1838962 None:intergenic 25.0%
! CTACAAAGAAAAATAAGTGT+GGG - chr6_3:1838946-1838965 Msa0933350:intron 25.0%
! AGACAATAAAAAATGTTGGA+GGG - chr6_3:1839043-1839062 Msa0933350:intron 25.0%
! GGGAGTAATAATTATTATTG+AGG + chr6_3:1839193-1839212 None:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + chr6_3:1839257-1839276 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + chr6_3:1839258-1839277 None:intergenic 25.0%
! CAAAGAAATTTCAAGAAGTT+TGG - chr6_3:1839590-1839609 Msa0933350:intron 25.0%
!! ACAACTTTTATAACTAGCTA+TGG - chr6_3:1839871-1839890 Msa0933350:intron 25.0%
! TATGGATAATGAAATCTACT+AGG - chr6_3:1839889-1839908 Msa0933350:intron 25.0%
! AATGAAATCTACTAGGTAAT+TGG - chr6_3:1839896-1839915 Msa0933350:intron 25.0%
!! TGAAATATTTGAAATTGGAG+AGG - chr6_3:1840015-1840034 Msa0933350:intron 25.0%
! AACACAACTACTTTATAAAG+AGG - chr6_3:1840038-1840057 Msa0933350:intron 25.0%
! AATGTATATAAGAAAGAGAG+AGG - chr6_3:1840061-1840080 Msa0933350:intron 25.0%
! TATGTAAAATGAGGAGATAT+AGG + chr6_3:1840468-1840487 None:intergenic 25.0%
!! ATATCTCCTCATTTTACATA+TGG - chr6_3:1840468-1840487 Msa0933350:intron 25.0%
! TGAAAACCATATGTAAAATG+AGG + chr6_3:1840477-1840496 None:intergenic 25.0%
! ATTTGTGAAGATGGAATAAT+GGG + chr6_3:1840681-1840700 None:intergenic 25.0%
! AATTTGTGAAGATGGAATAA+TGG + chr6_3:1840682-1840701 None:intergenic 25.0%
!! CGTTTTTATTATCATAAGCA+TGG + chr6_3:1840892-1840911 None:intergenic 25.0%
! ATATATTAACACCTTCACTT+TGG + chr6_3:1840991-1841010 None:intergenic 25.0%
!!! GAAAAAGTTATTTTCATGCT+TGG + chr6_3:1841020-1841039 None:intergenic 25.0%
!!! ATGAGATTAAGAATTTTTGG+AGG - chr6_3:1841126-1841145 Msa0933350:CDS 25.0%
! TTATCTCTAAACTCATTTGT+TGG + chr6_3:1841205-1841224 None:intergenic 25.0%
TAAAATCAAGTCTTCTTCCA+TGG + chr6_3:1836828-1836847 None:intergenic 30.0%
TATATTGCAAATCATGGTGA+AGG - chr6_3:1836854-1836873 Msa0933350:CDS 30.0%
!! ACCATGAGAAAAGTACTATA+AGG - chr6_3:1837398-1837417 Msa0933350:intron 30.0%
! TCCTTATAGTACTTTTCTCA+TGG + chr6_3:1837402-1837421 None:intergenic 30.0%
! TAAGCAATATTTTCAGCCAT+AGG + chr6_3:1837488-1837507 None:intergenic 30.0%
!!! TTTGTGGTTTTATATCCGTA+TGG - chr6_3:1837557-1837576 Msa0933350:intron 30.0%
!!! TTGTGGTTTTATATCCGTAT+GGG - chr6_3:1837558-1837577 Msa0933350:intron 30.0%
TTAATTGTGAGAGAGATAGA+GGG + chr6_3:1837671-1837690 None:intergenic 30.0%
ATTAATTGTGAGAGAGATAG+AGG + chr6_3:1837672-1837691 None:intergenic 30.0%
GCTTATAAGTTGTTATGTTG+TGG - chr6_3:1837719-1837738 Msa0933350:intron 30.0%
! CTTCCATGCATATGTTTTAT+AGG + chr6_3:1837746-1837765 None:intergenic 30.0%
CTATAAAACATATGCATGGA+AGG - chr6_3:1837744-1837763 Msa0933350:intron 30.0%
TTTGATCTCACTAGAATACA+AGG - chr6_3:1837776-1837795 Msa0933350:intron 30.0%
CTAGAATACAAGGAATAAAG+AGG - chr6_3:1837786-1837805 Msa0933350:intron 30.0%
TGAGAAATACAACGGAAAAA+GGG + chr6_3:1837837-1837856 None:intergenic 30.0%
ATGAGAAATACAACGGAAAA+AGG + chr6_3:1837838-1837857 None:intergenic 30.0%
GAGCTTAGTATACCTTATAT+AGG - chr6_3:1838022-1838041 Msa0933350:intron 30.0%
TAATGTTGCAAATGATGTAG+AGG + chr6_3:1838283-1838302 None:intergenic 30.0%
TCTACATCATTTGCAACATT+AGG - chr6_3:1838282-1838301 Msa0933350:intron 30.0%
GAAATGGAGAGACTAATAAA+TGG - chr6_3:1838464-1838483 Msa0933350:intron 30.0%
! CTTTGTCTTTTACTATTGAG+AGG + chr6_3:1838683-1838702 None:intergenic 30.0%
AGTAAAAGACAAAGACTAAG+AGG - chr6_3:1838689-1838708 Msa0933350:intron 30.0%
GAAGATAGATATCTAGAAGA+TGG - chr6_3:1838711-1838730 Msa0933350:intron 30.0%
TTTGGCAAAGATAAATGCAA+AGG + chr6_3:1838746-1838765 None:intergenic 30.0%
!!! CTCTCTCTCACTTTTTTTTT+TGG + chr6_3:1838764-1838783 None:intergenic 30.0%
!! CCACACTTATTTTTCTTTGT+AGG + chr6_3:1838948-1838967 None:intergenic 30.0%
CCTACAAAGAAAAATAAGTG+TGG - chr6_3:1838945-1838964 Msa0933350:intron 30.0%
GAGACAATAAAAAATGTTGG+AGG - chr6_3:1839042-1839061 Msa0933350:intron 30.0%
AATAAAAAATGTTGGAGGGA+TGG - chr6_3:1839047-1839066 Msa0933350:intron 30.0%
AATATATGAACTAGGATAGG+TGG - chr6_3:1839161-1839180 Msa0933350:intron 30.0%
AGAAAATAGGTCAGTTATTC+CGG + chr6_3:1839222-1839241 None:intergenic 30.0%
!! TTGTACTTGTTTTCTTGGTT+GGG + chr6_3:1839752-1839771 None:intergenic 30.0%
!! TTTGTACTTGTTTTCTTGGT+TGG + chr6_3:1839753-1839772 None:intergenic 30.0%
!! GTGTTTTGTACTTGTTTTCT+TGG + chr6_3:1839757-1839776 None:intergenic 30.0%
ACAAGTACAAAACACTAAGA+AGG - chr6_3:1839762-1839781 Msa0933350:intron 30.0%
ATATAAGAAAGAGAGAGGTT+TGG - chr6_3:1840066-1840085 Msa0933350:intron 30.0%
GTAAGTGAGAAATGTGATAT+TGG - chr6_3:1840132-1840151 Msa0933350:intron 30.0%
! AAATGTGATATTGGTGATCT+TGG - chr6_3:1840141-1840160 Msa0933350:intron 30.0%
! ATTTTCCGTTGTATCATCAA+AGG - chr6_3:1840191-1840210 Msa0933350:intron 30.0%
! TTTTCCGTTGTATCATCAAA+GGG - chr6_3:1840192-1840211 Msa0933350:intron 30.0%
CTATTGTTATAAGATGCTGA+AGG + chr6_3:1840219-1840238 None:intergenic 30.0%
TTATTCTCAACCAAAGAACA+TGG - chr6_3:1840275-1840294 Msa0933350:intron 30.0%
AAAGAAAGAAATGCAACAAG+TGG + chr6_3:1840395-1840414 None:intergenic 30.0%
TATAGAAAAATGTGCATGTG+TGG + chr6_3:1840441-1840460 None:intergenic 30.0%
GTCACTAAAATTTGTGAAGA+TGG + chr6_3:1840690-1840709 None:intergenic 30.0%
TCTTTGATATCTGATACTAG+AGG - chr6_3:1840801-1840820 Msa0933350:intron 30.0%
AGAAATATCTTGCGAACATT+AGG + chr6_3:1840862-1840881 None:intergenic 30.0%
TACAAATTATTCACCATTGC+AGG - chr6_3:1841063-1841082 Msa0933350:CDS 30.0%
!! TTAAGAATTTTTGGAGGACT+AGG - chr6_3:1841132-1841151 Msa0933350:CDS 30.0%
!!! TGTTGGAAATTATTTTGGTG+AGG + chr6_3:1841188-1841207 None:intergenic 30.0%
TCATTTGTACAACAACTTGA+GGG + chr6_3:1841356-1841375 None:intergenic 30.0%
TAACAACAATTATTGGAGCA+TGG - chr6_3:1841382-1841401 Msa0933350:CDS 30.0%
AAGATCCTGAAGTGAGAAAA+GGG - chr6_3:1836795-1836814 Msa0933350:CDS 35.0%
AAAGAAATTACCAGCAGCTT+TGG + chr6_3:1836897-1836916 None:intergenic 35.0%
TTTCTCAGTAAACCCTAACT+AGG - chr6_3:1836976-1836995 Msa0933350:CDS 35.0%
TTCTCAGTAAACCCTAACTA+GGG - chr6_3:1836977-1836996 Msa0933350:CDS 35.0%
TTCTAGGTCTTAAACGTACA+GGG - chr6_3:1837031-1837050 Msa0933350:CDS 35.0%
ATATTCCCTCTTCTAACATC+TGG + chr6_3:1837093-1837112 None:intergenic 35.0%
ATGATCAAAAGTTGTTCCTC+AGG + chr6_3:1837120-1837139 None:intergenic 35.0%
! TGAGGAACAACTTTTGATCA+TGG - chr6_3:1837119-1837138 Msa0933350:intron 35.0%
!! TGGGAGTTTTGTAAAACCTA+TGG - chr6_3:1837469-1837488 Msa0933350:intron 35.0%
GGACCTATAAAACATATGCA+TGG - chr6_3:1837740-1837759 Msa0933350:intron 35.0%
AAACATATGCATGGAAGGTT+TGG - chr6_3:1837749-1837768 Msa0933350:intron 35.0%
GAGAAATACAACGGAAAAAG+GGG + chr6_3:1837836-1837855 None:intergenic 35.0%
GAGAATAAAGAGACTGCAAA+CGG - chr6_3:1838435-1838454 Msa0933350:intron 35.0%
CAAAGAAAAATAAGTGTGGG+AGG - chr6_3:1838949-1838968 Msa0933350:intron 35.0%
GAAAATAGGTCAGTTATTCC+GGG + chr6_3:1839221-1839240 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr6_3:1839391-1839410 Msa0933350:intron 35.0%
CCAAAGTAGGTCAATTAAAC+CGG - chr6_3:1839404-1839423 Msa0933350:intron 35.0%
CAAAGTAGGTCAATTAAACC+GGG - chr6_3:1839405-1839424 Msa0933350:intron 35.0%
TGATTGAGAACCAAATAGCT+TGG - chr6_3:1839493-1839512 Msa0933350:intron 35.0%
! ACAAGGTCAGCTTCTATTTT+AGG - chr6_3:1839516-1839535 Msa0933350:intron 35.0%
! AAGTTGCATGGCATTTTGTT+TGG + chr6_3:1839627-1839646 None:intergenic 35.0%
! ACAAAATGCCATGCAACTTT+TGG - chr6_3:1839628-1839647 Msa0933350:intron 35.0%
TTCTCACTTACATGTCTCAA+AGG + chr6_3:1840123-1840142 None:intergenic 35.0%
TCAAGTAAGACCATGTTCTT+TGG + chr6_3:1840288-1840307 None:intergenic 35.0%
GTAAAATGAGGAGATATAGG+AGG + chr6_3:1840465-1840484 None:intergenic 35.0%
AAATTATTCACCATTGCAGG+TGG - chr6_3:1841066-1841085 Msa0933350:CDS 35.0%
! TGGAAGATGCTTTGCAATTT+TGG + chr6_3:1841093-1841112 None:intergenic 35.0%
! AAAATTGCAAAGCATCTTCC+AGG - chr6_3:1841092-1841111 Msa0933350:CDS 35.0%
TTGATTGTTGGAAATTGAGC+TGG + chr6_3:1841326-1841345 None:intergenic 35.0%
GTCATTTGTACAACAACTTG+AGG + chr6_3:1841357-1841376 None:intergenic 35.0%
TGGTCAATGCAATTACTCAA+TGG - chr6_3:1841413-1841432 Msa0933350:CDS 35.0%
GGATCTTGAGATGAGTTACA+CGG + chr6_3:1836782-1836801 None:intergenic 40.0%
CAAGATCCTGAAGTGAGAAA+AGG - chr6_3:1836794-1836813 Msa0933350:CDS 40.0%
!! CAAATCATGGTGAAGGTGTT+TGG - chr6_3:1836861-1836880 Msa0933350:CDS 40.0%
CTTCTAGGTCTTAAACGTAC+AGG - chr6_3:1837030-1837049 Msa0933350:CDS 40.0%
TTCGTCCAGATGTTAGAAGA+GGG - chr6_3:1837085-1837104 Msa0933350:CDS 40.0%
AAGAGGGAATATTACACCTG+AGG - chr6_3:1837101-1837120 Msa0933350:CDS 40.0%
TCATGGAACTTCATGCAAAG+TGG - chr6_3:1837136-1837155 Msa0933350:intron 40.0%
CATGGAACTTCATGCAAAGT+GGG - chr6_3:1837137-1837156 Msa0933350:intron 40.0%
ATGGAACTTCATGCAAAGTG+GGG - chr6_3:1837138-1837157 Msa0933350:intron 40.0%
TTCATGCAAAGTGGGGAAAT+AGG - chr6_3:1837145-1837164 Msa0933350:intron 40.0%
TTGAGAGAAATCTAGCCAAG+AGG - chr6_3:1837432-1837451 Msa0933350:intron 40.0%
ATGTGTTGAAGTCTTCCTCT+TGG + chr6_3:1837450-1837469 None:intergenic 40.0%
AAGAGGAAGACTTCAACACA+TGG - chr6_3:1837449-1837468 Msa0933350:intron 40.0%
AGAGGAAGACTTCAACACAT+GGG - chr6_3:1837450-1837469 Msa0933350:intron 40.0%
ACTCTCTTAACACTCCCATA+CGG + chr6_3:1837575-1837594 None:intergenic 40.0%
AATACAACGGAAAAAGGGGA+AGG + chr6_3:1837832-1837851 None:intergenic 40.0%
! GAAGGGCATGAGAAATACAA+CGG + chr6_3:1837845-1837864 None:intergenic 40.0%
ATGTTGTGAAAGATGCAGCA+AGG - chr6_3:1837964-1837983 Msa0933350:intron 40.0%
TGTTGCAAATGATGTAGAGG+CGG + chr6_3:1838280-1838299 None:intergenic 40.0%
AATCTATGAGAGAGAGAGAG+AGG - chr6_3:1838364-1838383 Msa0933350:intron 40.0%
ATCTATGAGAGAGAGAGAGA+GGG - chr6_3:1838365-1838384 Msa0933350:intron 40.0%
CTGCAAACGGAATGAAGAAA+TGG - chr6_3:1838448-1838467 Msa0933350:intron 40.0%
GGAGAGACTAATAAATGGAG+AGG - chr6_3:1838469-1838488 Msa0933350:intron 40.0%
AAATGGAGAGGATCTTGACT+CGG - chr6_3:1838481-1838500 Msa0933350:intron 40.0%
AAAGTGAGAGAGAGAACAAG+AGG - chr6_3:1838770-1838789 Msa0933350:intron 40.0%
AAAAATAAGTGTGGGAGGAG+AGG - chr6_3:1838954-1838973 Msa0933350:intron 40.0%
CCGGTTTAATTGACCTACTT+TGG + chr6_3:1839407-1839426 None:intergenic 40.0%
AGAACCAAATAGCTTGGACA+AGG - chr6_3:1839499-1839518 Msa0933350:intron 40.0%
!! TCTATTTTAGGCTGAGCTCA+TGG - chr6_3:1839528-1839547 Msa0933350:intron 40.0%
! TTGGGAAGGTACACTAGATA+GGG + chr6_3:1839715-1839734 None:intergenic 40.0%
! ATTGGGAAGGTACACTAGAT+AGG + chr6_3:1839716-1839735 None:intergenic 40.0%
!! ACTTGTTTTCTTGGTTGGGA+AGG + chr6_3:1839748-1839767 None:intergenic 40.0%
TACTAGGTAATTGGTACACG+TGG - chr6_3:1839905-1839924 Msa0933350:intron 40.0%
ATGCCTTTGCTTTGTAGCTT+GGG + chr6_3:1840169-1840188 None:intergenic 40.0%
TATGCCTTTGCTTTGTAGCT+TGG + chr6_3:1840170-1840189 None:intergenic 40.0%
! AGGTCCCTTTGATGATACAA+CGG + chr6_3:1840199-1840218 None:intergenic 40.0%
TTGGATTTATCGTTGTGTCG+CGG - chr6_3:1840778-1840797 Msa0933350:intron 40.0%
ATTGATCATTCGAGAAGCCA+AGG - chr6_3:1840960-1840979 Msa0933350:intron 40.0%
ATCTCATTGTCAGTTCTTCC+TGG + chr6_3:1841113-1841132 None:intergenic 40.0%
GCTCTACAATGTTGGAAACT+TGG + chr6_3:1841253-1841272 None:intergenic 40.0%
TTCCAACATTGTAGAGCCAA+TGG - chr6_3:1841256-1841275 Msa0933350:intron 40.0%
!! TTCCATTGGCTCTACAATGT+TGG + chr6_3:1841261-1841280 None:intergenic 40.0%
GGTGAAGAGTAAGTTTCCAT+TGG + chr6_3:1841275-1841294 None:intergenic 40.0%
GTTGGAAATTGAGCTGGAAA+TGG + chr6_3:1841320-1841339 None:intergenic 40.0%
! GAGGGATGATCATTGATTGT+TGG + chr6_3:1841338-1841357 None:intergenic 40.0%
CAACAATTATTGGAGCATGG+AGG - chr6_3:1841385-1841404 Msa0933350:CDS 40.0%
AAGTCTTCTTCCATGGTCCA+TGG + chr6_3:1836821-1836840 None:intergenic 45.0%
AATTCCTTAGCCAAAGCTGC+TGG - chr6_3:1836884-1836903 Msa0933350:CDS 45.0%
! ATTACCAGCAGCTTTGGCTA+AGG + chr6_3:1836891-1836910 None:intergenic 45.0%
AACGTACAGGGAAAAGTTGC+AGG - chr6_3:1837043-1837062 Msa0933350:CDS 45.0%
CTCTTCTAACATCTGGACGA+AGG + chr6_3:1837086-1837105 None:intergenic 45.0%
CTTCGTCCAGATGTTAGAAG+AGG - chr6_3:1837084-1837103 Msa0933350:CDS 45.0%
TGTGAAAGATGCAGCAAGGT+TGG - chr6_3:1837968-1837987 Msa0933350:intron 45.0%
ATGTAGAGGCGGTACGTATA+GGG + chr6_3:1838269-1838288 None:intergenic 45.0%
CTCTCTCTCTCTCTCACTAA+AGG + chr6_3:1838564-1838583 None:intergenic 45.0%
GGAGTTTGAGAGAACTCTCA+CGG - chr6_3:1838846-1838865 Msa0933350:intron 45.0%
TGTAGGAAAGGGATGCACAT+TGG + chr6_3:1838931-1838950 None:intergenic 45.0%
AATTATTACTCCCTCCGTCC+CGG - chr6_3:1839200-1839219 Msa0933350:intron 45.0%
ATAGGTCAGTTATTCCGGGA+CGG + chr6_3:1839217-1839236 None:intergenic 45.0%
GTAGGTCAATTAAACCGGGA+CGG - chr6_3:1839409-1839428 Msa0933350:intron 45.0%
CTGACCTTGTCCAAGCTATT+TGG + chr6_3:1839506-1839525 None:intergenic 45.0%
CACAAGAGCCAAAAGTTGCA+TGG + chr6_3:1839639-1839658 None:intergenic 45.0%
AAGGTACACTAGATAGGGTG+TGG + chr6_3:1839710-1839729 None:intergenic 45.0%
AAGGAGTTAGAGGATTGGGA+AGG + chr6_3:1839729-1839748 None:intergenic 45.0%
TGGGAAGGAGTTAGAGGATT+GGG + chr6_3:1839733-1839752 None:intergenic 45.0%
TTGGGAAGGAGTTAGAGGAT+TGG + chr6_3:1839734-1839753 None:intergenic 45.0%
TGCGAACATTAGGCTATGAC+TGG + chr6_3:1840852-1840871 None:intergenic 45.0%
CCTTCACTTTGGATCAACCT+TGG + chr6_3:1840980-1840999 None:intergenic 45.0%
! CCAAGGTTGATCCAAAGTGA+AGG - chr6_3:1840977-1840996 Msa0933350:intron 45.0%
! CAATTTTGGACCACCTGCAA+TGG + chr6_3:1841079-1841098 None:intergenic 45.0%
TACTCTTCACCTTCGTACCA+AGG - chr6_3:1841284-1841303 Msa0933350:intron 45.0%
ACCTTCGTACCAAGGAACTT+TGG - chr6_3:1841292-1841311 Msa0933350:intron 45.0%
TCCAAAGTTCCTTGGTACGA+AGG + chr6_3:1841296-1841315 None:intergenic 45.0%
GAAATGGCTCCAAAGTTCCT+TGG + chr6_3:1841304-1841323 None:intergenic 45.0%
! CATGGCCCTTTTCTCACTTC+AGG + chr6_3:1836803-1836822 None:intergenic 50.0%
CTGAAGTGAGAAAAGGGCCA+TGG - chr6_3:1836801-1836820 Msa0933350:CDS 50.0%
GGAAAAGTTGCAGGCTTCGA+TGG - chr6_3:1837052-1837071 Msa0933350:CDS 50.0%
ATAGAGGGAGAGAGAGAGGA+GGG + chr6_3:1837656-1837675 None:intergenic 50.0%
AGAGATAGAGGGAGAGAGAG+AGG + chr6_3:1837660-1837679 None:intergenic 50.0%
GATGTAGAGGCGGTACGTAT+AGG + chr6_3:1838270-1838289 None:intergenic 50.0%
TGAGAGAACTCTCACGGTTG+AGG - chr6_3:1838852-1838871 Msa0933350:intron 50.0%
GAAAGGGATGCACATTGGAG+AGG + chr6_3:1838926-1838945 None:intergenic 50.0%
GTCAATTAAACCGGGACGGA+GGG - chr6_3:1839413-1839432 Msa0933350:intron 50.0%
ATACTATACTCCCTCCGTCC+CGG + chr6_3:1839426-1839445 None:intergenic 50.0%
TAGGCTGAGCTCATGGAAAG+TGG - chr6_3:1839535-1839554 Msa0933350:intron 50.0%
AGGCTGAGCTCATGGAAAGT+GGG - chr6_3:1839536-1839555 Msa0933350:intron 50.0%
CTTGGTTGGGAAGGAGTTAG+AGG + chr6_3:1839739-1839758 None:intergenic 50.0%
GAGCCCAAGCTACAAAGCAA+AGG - chr6_3:1840163-1840182 Msa0933350:intron 50.0%
ATTGGAGCATGGAGGACATC+TGG - chr6_3:1841393-1841412 Msa0933350:CDS 50.0%
GAGAAAAGGGCCATGGACCA+TGG - chr6_3:1836808-1836827 Msa0933350:CDS 55.0%
TAGAGGGAGAGAGAGAGGAG+GGG + chr6_3:1837655-1837674 None:intergenic 55.0%
GATAGAGGGAGAGAGAGAGG+AGG + chr6_3:1837657-1837676 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr6_3:1839213-1839232 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG - chr6_3:1839412-1839431 Msa0933350:intron 55.0%
GGCTGAGCTCATGGAAAGTG+GGG - chr6_3:1839537-1839556 Msa0933350:intron 55.0%
GCTGAGCTCATGGAAAGTGG+GGG - chr6_3:1839538-1839557 Msa0933350:intron 55.0%
GGTCAGTTATTCCGGGACGG+AGG + chr6_3:1839214-1839233 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 1836767 1841442 1836767 ID=Msa0933350;Name=Msa0933350
chr6_3 mRNA 1836767 1841442 1836767 ID=Msa0933350-mRNA-1;Parent=Msa0933350;Name=Msa0933350-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|3|0|208
chr6_3 exon 1841304 1841442 1841304 ID=Msa0933350-mRNA-1:exon:737;Parent=Msa0933350-mRNA-1
chr6_3 exon 1841043 1841172 1841043 ID=Msa0933350-mRNA-1:exon:736;Parent=Msa0933350-mRNA-1
chr6_3 exon 1836767 1837124 1836767 ID=Msa0933350-mRNA-1:exon:735;Parent=Msa0933350-mRNA-1
chr6_3 CDS 1841304 1841442 1841304 ID=Msa0933350-mRNA-1:cds;Parent=Msa0933350-mRNA-1
chr6_3 CDS 1841043 1841172 1841043 ID=Msa0933350-mRNA-1:cds;Parent=Msa0933350-mRNA-1
chr6_3 CDS 1836767 1837124 1836767 ID=Msa0933350-mRNA-1:cds;Parent=Msa0933350-mRNA-1
Gene Sequence

>Msa0933350

ATGGATAAAAAACCGTGTAACTCATCTCAAGATCCTGAAGTGAGAAAAGGGCCATGGACCATGGAAGAAGACTTGATTTTAATCAATTATATTGCAAATCATGGTGAAGGTGTTTGGAATTCCTTAGCCAAAGCTGCTGGTCTTAAACGTACAGGGAAAAGTTGCAGGCTTCGATGGCTAAACTACCTTCGTCCAGATGTTAGAAGAGGGAATATTACACCTGAGGAACAACTTTTGATCATGGAACTTCATGCAAAGTGGGGAAATAGGTGGTCCAAAATTGCAAAGCATCTTCCAGGAAGAACTGACAATGAGATTAAGAATTTTTGGAGGACTAGGATACAAAAGCACATTAAGCAAGTTGATCATCCTCACCAAAATAATTTCCAACAAATGAGTTTAGAGATAAATGATCATCATCAATCAAGTAGTAGCCAAGTTTCCAACATTGTAGAGCCAATGGAAACTTACTCTTCACCTTCGTACCAAGGAACTTTGGAGCCATTTCCAGCTCAATTTCCAACAATCAATGATCATCCCTCAAGTTGTTGTACAAATGACAACAATAACAACAATTATTGGAGCATGGAGGACATCTGGTCAATGCAATTACTCAATGGAGATTAA
Protein sequence

>Msa0933350

MDKKPCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQVDHPHQNNFQQMSLEINDHHQSSSSQVSNIVEPMETYSSPSYQGTLEPFPAQFPTINDHPSSCCTNDNNNNNYWSMEDIWSMQLLNGD*