AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0936470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0936470 MtrunA17_Chr6g0452271 93.895 344 13 2 1 344 1 336 0.0 629
Msa0936470 MtrunA17_Chr3g0103281 66.423 137 46 0 1 137 1 137 8.29e-66 210
Msa0936470 MtrunA17_Chr5g0410961 50.244 205 91 3 1 198 1 201 7.81e-65 208
Msa0936470 MtrunA17_Chr4g0039971 48.677 189 86 2 1 182 2 186 7.12e-63 204
Msa0936470 MtrunA17_Chr1g0151941 60.256 156 57 4 1 154 1 153 4.45e-62 198
Msa0936470 MtrunA17_Chr4g0048511 62.857 140 50 2 1 139 1 139 5.43e-62 201
Msa0936470 MtrunA17_Chr6g0453471 65.625 128 44 0 1 128 1 128 5.89e-62 201
Msa0936470 MtrunA17_Chr2g0281071 65.891 129 43 1 1 128 1 129 6.74e-62 201
Msa0936470 MtrunA17_Chr7g0217741 62.406 133 50 0 1 133 1 133 7.42e-62 200
Msa0936470 MtrunA17_Chr3g0115821 54.545 154 67 1 1 151 1 154 2.07e-61 200
Msa0936470 MtrunA17_Chr2g0323411 59.859 142 57 0 1 142 1 142 1.00e-60 197
Msa0936470 MtrunA17_Chr4g0037141 60.606 132 52 0 1 132 1 132 2.11e-59 192
Msa0936470 MtrunA17_Chr1g0193371 56.522 161 66 2 1 161 1 157 1.09e-58 193
Msa0936470 MtrunA17_Chr7g0270891 62.121 132 50 0 1 132 1 132 5.71e-58 191
Msa0936470 MtrunA17_Chr1g0193801 60.606 132 52 0 1 132 1 132 9.13e-58 191
Msa0936470 MtrunA17_Chr4g0057031 61.832 131 50 0 1 131 1 131 9.43e-58 188
Msa0936470 MtrunA17_Chr4g0058631 54.362 149 68 0 1 149 1 149 9.58e-58 191
Msa0936470 MtrunA17_Chr3g0117091 59.559 136 55 0 1 136 1 136 1.21e-57 190
Msa0936470 MtrunA17_Chr4g0042671 55.263 152 59 1 1 143 1 152 1.45e-57 191
Msa0936470 MtrunA17_Chr7g0228891 61.832 131 50 0 1 131 1 131 4.67e-57 186
Msa0936470 MtrunA17_Chr7g0264641 66.667 120 39 1 1 119 1 120 1.16e-56 185
Msa0936470 MtrunA17_Chr1g0211161 60.630 127 50 0 3 129 4 130 1.56e-56 183
Msa0936470 MtrunA17_Chr4g0028311 63.281 128 46 1 1 127 1 128 4.74e-56 185
Msa0936470 MtrunA17_Chr5g0395281 52.055 146 70 0 1 146 1 146 1.35e-55 183
Msa0936470 MtrunA17_Chr5g0435101 51.974 152 72 1 3 154 2 152 2.31e-55 180
Msa0936470 MtrunA17_Chr2g0309911 61.600 125 48 0 6 130 5 129 5.04e-55 182
Msa0936470 MtrunA17_Chr1g0152011 46.040 202 85 5 1 187 1 193 5.48e-55 183
Msa0936470 MtrunA17_Chr8g0349261 59.848 132 51 2 1 130 1 132 1.08e-54 181
Msa0936470 MtrunA17_Chr3g0110351 60.150 133 53 0 1 133 1 133 1.56e-54 181
Msa0936470 MtrunA17_Chr3g0135311 66.102 118 39 1 1 117 1 118 2.56e-54 181
Msa0936470 MtrunA17_Chr8g0385321 56.818 132 57 0 1 132 1 132 3.49e-54 180
Msa0936470 MtrunA17_Chr5g0434571 60.000 130 52 0 1 130 37 166 3.59e-54 181
Msa0936470 MtrunA17_Chr5g0400821 63.559 118 42 1 1 117 1 118 1.31e-53 178
Msa0936470 MtrunA17_Chr3g0131121 56.923 130 56 0 1 130 1 130 2.42e-53 177
Msa0936470 MtrunA17_Chr2g0330041 48.588 177 76 2 1 162 1 177 2.36e-52 177
Msa0936470 MtrunA17_Chr3g0121241 60.000 125 50 0 5 129 35 159 3.27e-52 174
Msa0936470 MtrunA17_Chr7g0271241 54.375 160 72 1 1 159 1 160 6.51e-52 176
Msa0936470 MtrunA17_Chr8g0387421 60.169 118 47 0 1 118 1 118 7.42e-52 174
Msa0936470 MtrunA17_Chr7g0217221 62.712 118 44 0 1 118 1 118 9.92e-52 172
Msa0936470 MtrunA17_Chr2g0327351 65.766 111 37 1 1 110 1 111 1.86e-51 173
Msa0936470 MtrunA17_Chr4g0054391 68.182 110 34 1 1 109 1 110 2.01e-51 172
Msa0936470 MtrunA17_Chr7g0254411 59.200 125 49 1 1 123 1 125 2.26e-51 173
Msa0936470 MtrunA17_Chr1g0203411 62.069 116 44 0 1 116 1 116 3.54e-51 172
Msa0936470 MtrunA17_Chr7g0275911 62.931 116 43 0 1 116 1 116 4.08e-51 170
Msa0936470 MtrunA17_Chr5g0397231 63.636 110 40 0 1 110 1 110 4.94e-51 172
Msa0936470 MtrunA17_Chr8g0342521 58.537 123 51 0 1 123 1 123 1.85e-50 171
Msa0936470 MtrunA17_Chr8g0342541 53.521 142 65 1 1 142 1 141 6.39e-50 170
Msa0936470 MtrunA17_Chr8g0346561 61.017 118 46 0 1 118 1 118 3.79e-49 166
Msa0936470 MtrunA17_Chr4g0060721 57.627 118 50 0 1 118 2 119 4.06e-49 167
Msa0936470 MtrunA17_Chr3g0092401 59.664 119 48 0 1 119 2 120 4.80e-49 167
Msa0936470 MtrunA17_Chr4g0072751 63.964 111 39 1 1 110 1 111 6.21e-49 167
Msa0936470 MtrunA17_Chr1g0187761 61.207 116 45 0 1 116 1 116 1.55e-48 164
Msa0936470 MtrunA17_Chr4g0068061 45.251 179 87 3 1 168 1 179 2.30e-48 166
Msa0936470 MtrunA17_Chr2g0323351 59.322 118 48 0 1 118 1 118 2.58e-48 163
Msa0936470 MtrunA17_Chr1g0167691 49.686 159 75 2 1 154 1 159 7.28e-48 162
Msa0936470 MtrunA17_Chr4g0044421 57.143 126 54 0 1 126 1 126 1.43e-47 159
Msa0936470 MtrunA17_Chr7g0261281 57.759 116 49 0 1 116 1 116 2.62e-47 161
Msa0936470 MtrunA17_Chr4g0022931 59.829 117 46 1 1 116 1 117 3.17e-47 160
Msa0936470 MtrunA17_Chr4g0070611 59.483 116 47 0 1 116 1 116 6.38e-47 161
Msa0936470 MtrunA17_Chr2g0311221 63.303 109 40 0 2 110 4 112 9.76e-47 161
Msa0936470 MtrunA17_Chr4g0070641 59.483 116 47 0 1 116 1 116 1.30e-46 155
Msa0936470 MtrunA17_Chr7g0274581 53.390 118 55 0 1 118 1 118 1.77e-46 157
Msa0936470 MtrunA17_Chr4g0022901 58.475 118 48 1 1 117 1 118 2.15e-46 159
Msa0936470 MtrunA17_Chr5g0417821 55.462 119 53 0 12 130 7 125 4.23e-46 158
Msa0936470 MtrunA17_Chr6g0487491 59.524 126 42 2 1 117 1 126 4.40e-46 157
Msa0936470 MtrunA17_Chr1g0167661 55.556 117 52 0 1 117 1 117 1.51e-45 155
Msa0936470 MtrunA17_Chr4g0022911 55.932 118 51 1 1 117 1 118 2.33e-45 156
Msa0936470 MtrunA17_Chr8g0342481 58.475 118 48 1 1 117 1 118 2.91e-45 159
Msa0936470 MtrunA17_Chr6g0453211 40.097 207 92 2 1 207 1 175 3.37e-44 154
Msa0936470 MtrunA17_Chr3g0088461 57.798 109 46 0 8 116 18 126 8.44e-44 154
Msa0936470 MtrunA17_Chr2g0328771 56.481 108 47 0 12 119 20 127 5.83e-43 151
Msa0936470 MtrunA17_Chr4g0022891 50.000 136 64 1 1 132 1 136 1.86e-42 147
Msa0936470 MtrunA17_Chr1g0194951 51.562 128 62 0 1 128 1 128 4.60e-42 150
Msa0936470 MtrunA17_Chr1g0203441 53.488 129 56 3 1 127 1 127 1.52e-41 146
Msa0936470 MtrunA17_Chr4g0032401 33.569 283 165 4 12 294 17 276 2.29e-41 147
Msa0936470 MtrunA17_Chr7g0228231 57.547 106 45 0 11 116 13 118 1.02e-40 142
Msa0936470 MtrunA17_Chr4g0022881 51.754 114 55 0 1 114 1 114 1.60e-40 142
Msa0936470 MtrunA17_Chr7g0247131 63.736 91 33 0 44 134 10 100 2.62e-40 142
Msa0936470 MtrunA17_Chr3g0093811 44.670 197 100 4 44 238 14 203 4.90e-40 142
Msa0936470 MtrunA17_Chr6g0470971 48.175 137 70 1 9 145 11 146 5.69e-40 142
Msa0936470 MtrunA17_Chr1g0209661 48.760 121 62 0 12 132 27 147 9.65e-40 142
Msa0936470 MtrunA17_Chr6g0450101 51.240 121 57 1 1 119 1 121 1.17e-39 139
Msa0936470 MtrunA17_Chr7g0269831 56.897 116 50 0 1 116 1 116 6.44e-39 141
Msa0936470 MtrunA17_Chr4g0055981 51.181 127 62 0 9 135 52 178 7.84e-39 137
Msa0936470 MtrunA17_Chr3g0099131 54.717 106 48 0 10 115 39 144 3.02e-38 143
Msa0936470 MtrunA17_Chr8g0343831 57.009 107 46 0 12 118 8 114 6.12e-38 136
Msa0936470 MtrunA17_Chr5g0434931 55.660 106 47 0 12 117 35 140 6.19e-38 137
Msa0936470 MtrunA17_Chr5g0434911 54.054 111 51 0 7 117 16 126 6.47e-38 136
Msa0936470 MtrunA17_Chr3g0080861 56.731 104 45 0 12 115 37 140 2.23e-37 140
Msa0936470 MtrunA17_Chr1g0168661 56.311 103 45 0 13 115 22 124 5.74e-37 133
Msa0936470 MtrunA17_Chr7g0240821 48.551 138 68 1 17 151 6 143 1.23e-36 132
Msa0936470 MtrunA17_Chr1g0186061 56.311 103 45 0 13 115 21 123 1.28e-36 132
Msa0936470 MtrunA17_Chr1g0194291 50.435 115 57 0 8 122 17 131 2.73e-36 132
Msa0936470 MtrunA17_Chr5g0434831 54.717 106 48 0 12 117 7 112 3.49e-36 129
Msa0936470 MtrunA17_Chr1g0180391 52.830 106 50 0 11 116 18 123 4.25e-36 130
Msa0936470 MtrunA17_Chr1g0194301 49.565 115 58 0 8 122 29 143 4.56e-36 132
Msa0936470 MtrunA17_Chr7g0220341 54.630 108 47 1 12 117 25 132 8.48e-36 131
Msa0936470 MtrunA17_Chr4g0042611 57.955 88 37 0 1 88 1 88 8.85e-36 125
Msa0936470 MtrunA17_Chr7g0228991 54.717 106 48 0 12 117 29 134 1.62e-35 130
Msa0936470 MtrunA17_Chr8g0354661 53.846 104 48 0 12 115 37 140 1.89e-35 135
Msa0936470 MtrunA17_Chr5g0434841 53.774 106 49 0 12 117 20 125 3.43e-35 130
Msa0936470 MtrunA17_Chr2g0327821 52.885 104 49 0 12 115 6 109 4.10e-35 128
Msa0936470 MtrunA17_Chr1g0192411 51.754 114 54 1 8 121 8 120 7.18e-35 131
Msa0936470 MtrunA17_Chr2g0322521 54.206 107 49 0 9 115 26 132 3.12e-34 129
Msa0936470 MtrunA17_Chr1g0154031 52.885 104 49 0 12 115 76 179 4.14e-34 129
Msa0936470 MtrunA17_Chr5g0440781 48.276 116 58 2 10 124 10 124 5.35e-34 124
Msa0936470 MtrunA17_Chr8g0342511 59.302 86 35 0 1 86 1 86 7.13e-34 120
Msa0936470 MtrunA17_Chr8g0360111 54.455 101 46 0 12 112 25 125 7.98e-34 125
Msa0936470 MtrunA17_Chr2g0293911 51.304 115 56 0 8 122 20 134 1.69e-33 126
Msa0936470 MtrunA17_Chr8g0342531 57.303 89 38 0 1 89 1 89 4.22e-33 120
Msa0936470 MtrunA17_Chr5g0441141 48.276 116 58 2 10 124 10 124 4.51e-33 124
Msa0936470 MtrunA17_Chr5g0440761 48.276 116 58 2 10 124 10 124 4.66e-33 123
Msa0936470 MtrunA17_Chr4g0030881 50.000 110 48 1 13 115 8 117 1.46e-32 122
Msa0936470 MtrunA17_Chr4g0068921 53.271 107 50 0 8 114 20 126 2.29e-32 119
Msa0936470 MtrunA17_Chr2g0294811 53.763 93 42 1 1 93 1 92 1.80e-31 115
Msa0936470 MtrunA17_Chr8g0342461 55.556 90 39 1 1 89 1 90 2.13e-30 112
Msa0936470 MtrunA17_Chr5g0441131 46.552 116 60 2 10 124 7 121 3.46e-30 113
Msa0936470 MtrunA17_Chr2g0323321 54.348 92 41 1 1 92 1 91 4.93e-30 110
Msa0936470 MtrunA17_Chr8g0342471 55.556 90 39 1 1 89 1 90 6.68e-30 111
Msa0936470 MtrunA17_Chr5g0429661 31.776 214 126 4 14 216 122 326 8.67e-30 117
Msa0936470 MtrunA17_Chr5g0401731 42.975 121 68 1 14 134 15 134 3.19e-29 114
Msa0936470 MtrunA17_Chr5g0395221 53.571 84 39 0 5 88 5 88 5.65e-29 107
Msa0936470 MtrunA17_Chr8g0334881 46.018 113 59 2 8 119 6 117 3.28e-28 112
Msa0936470 MtrunA17_Chr3g0099141 52.326 86 41 0 8 93 36 121 4.98e-28 106
Msa0936470 MtrunA17_Chr4g0008551 36.025 161 98 2 14 174 38 193 2.84e-27 110
Msa0936470 MtrunA17_Chr6g0454921 45.045 111 60 1 14 124 15 124 3.34e-27 106
Msa0936470 MtrunA17_Chr4g0013361 42.222 135 74 3 8 141 6 137 3.40e-27 108
Msa0936470 MtrunA17_Chr4g0053431 45.098 102 55 1 14 115 5 105 7.33e-27 107
Msa0936470 MtrunA17_Chr4g0058991 45.455 110 59 1 9 118 204 312 4.78e-26 108
Msa0936470 MtrunA17_Chr3g0117511 42.727 110 62 1 9 118 178 286 1.41e-25 106
Msa0936470 MtrunA17_Chr7g0229101 62.857 70 26 0 44 113 4 73 2.20e-25 101
Msa0936470 MtrunA17_Chr3g0133601 43.519 108 60 1 8 115 31 137 2.41e-25 102
Msa0936470 MtrunA17_Chr5g0434901 64.706 68 24 0 46 113 7 74 2.59e-25 98.6
Msa0936470 MtrunA17_Chr7g0238631 48.544 103 52 1 14 116 113 214 8.43e-25 105
Msa0936470 MtrunA17_Chr6g0480581 41.667 120 65 3 14 129 4 122 9.24e-25 100
Msa0936470 MtrunA17_Chr7g0229131 57.534 73 31 0 45 117 5 77 2.47e-24 97.8
Msa0936470 MtrunA17_Chr6g0460661 40.594 101 59 1 10 110 12 111 1.33e-23 95.5
Msa0936470 MtrunA17_Chr5g0417621 45.098 102 55 1 14 115 134 234 3.43e-23 99.8
Msa0936470 MtrunA17_Chr7g0228531 42.593 108 60 2 11 118 217 322 8.50e-23 98.6
Msa0936470 MtrunA17_Chr4g0042501 44.118 102 56 1 14 115 105 205 1.57e-22 97.8
Msa0936470 MtrunA17_Chr5g0437321 42.424 99 56 1 14 112 19 116 2.41e-22 95.1
Msa0936470 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 2.50e-22 89.7
Msa0936470 MtrunA17_Chr3g0139671 41.748 103 59 1 14 116 85 186 3.29e-21 95.1
Msa0936470 MtrunA17_Chr3g0125801 35.526 152 96 2 8 159 10 159 2.80e-20 89.4
Msa0936470 MtrunA17_Chr7g0228401 36.923 130 56 3 8 113 250 377 4.56e-20 90.9
Msa0936470 MtrunA17_Chr6g0453751 45.055 91 41 2 12 93 20 110 5.04e-20 84.7
Msa0936470 MtrunA17_Chr1g0157731 39.806 103 61 1 14 116 91 192 7.14e-20 90.9
Msa0936470 MtrunA17_Chr7g0254261 37.778 135 81 2 14 148 89 220 1.11e-19 89.0
Msa0936470 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 1.43e-19 88.6
Msa0936470 MtrunA17_Chr1g0177901 43.956 91 47 2 23 113 6 92 8.57e-19 83.6
Msa0936470 MtrunA17_Chr7g0228481 38.835 103 61 2 11 113 217 317 1.02e-18 86.7
Msa0936470 MtrunA17_Chr5g0397841 42.857 98 54 2 12 109 109 204 3.55e-18 85.5
Msa0936470 MtrunA17_Chr7g0238651 40.404 99 57 1 14 110 7 105 8.85e-18 83.2
Msa0936470 MtrunA17_Chr7g0233061 36.207 116 59 3 10 119 176 282 2.62e-16 79.0
Msa0936470 MtrunA17_Chr5g0395231 58.824 51 21 0 78 128 5 55 3.37e-16 77.0
Msa0936470 MtrunA17_Chr8g0362231 38.596 114 68 2 17 130 25 136 4.30e-16 79.0
Msa0936470 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 7.63e-15 75.1
Msa0936470 MtrunA17_Chr3g0104491 41.414 99 49 4 53 144 1 97 1.06e-14 73.6
Msa0936470 MtrunA17_Chr3g0145551 70.000 40 12 0 92 131 2 41 2.53e-14 67.8
Msa0936470 MtrunA17_Chr1g0193901 52.308 65 28 2 5 66 2 66 4.28e-14 67.8
Msa0936470 MtrunA17_Chr1g0193891 52.308 65 28 2 5 66 2 66 4.28e-14 67.8
Msa0936470 MtrunA17_Chr1g0193871 52.308 65 28 2 5 66 2 66 4.28e-14 67.8
Msa0936470 MtrunA17_Chr1g0193881 52.308 65 28 2 5 66 2 66 4.28e-14 67.8
Msa0936470 MtrunA17_Chr4g0042621 52.381 63 21 1 89 142 15 77 4.28e-14 72.4
Msa0936470 MtrunA17_Chr5g0434871 61.364 44 17 0 74 117 2 45 8.16e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0936470 AT3G28470.1 46.631 371 117 12 1 344 1 317 5.94e-85 259
Msa0936470 AT5G56110.1 64.626 147 46 1 1 147 1 141 7.98e-67 213
Msa0936470 AT5G15310.4 50.259 193 86 4 1 184 1 192 4.94e-64 204
Msa0936470 AT5G16770.4 51.977 177 84 1 1 177 1 176 6.45e-64 206
Msa0936470 AT5G16770.3 51.977 177 84 1 1 177 1 176 6.45e-64 206
Msa0936470 AT5G15310.2 50.259 193 86 4 1 184 1 192 8.04e-64 205
Msa0936470 AT5G15310.1 50.259 193 86 4 1 184 1 192 8.69e-64 206
Msa0936470 AT5G16770.1 51.977 177 84 1 1 177 1 176 1.93e-63 205
Msa0936470 AT5G16770.2 51.977 177 84 1 1 177 1 176 1.93e-63 205
Msa0936470 AT4G21440.1 53.409 176 76 2 1 174 1 172 4.51e-63 204
Msa0936470 AT3G01140.2 64.179 134 48 0 1 134 1 134 5.78e-63 204
Msa0936470 AT3G02940.2 64.844 128 45 0 1 128 1 128 1.30e-62 202
Msa0936470 AT4G05100.1 67.442 129 41 1 1 128 1 129 1.89e-62 202
Msa0936470 AT3G02940.1 64.844 128 45 0 1 128 1 128 2.82e-62 201
Msa0936470 AT3G02940.3 64.844 128 45 0 1 128 1 128 2.82e-62 201
Msa0936470 AT4G28110.1 65.625 128 44 0 1 128 1 128 1.89e-61 198
Msa0936470 AT5G10280.1 47.826 184 94 1 1 184 1 182 1.34e-60 197
Msa0936470 AT1G09540.1 62.687 134 50 0 1 134 1 134 3.24e-60 197
Msa0936470 AT1G57560.1 49.730 185 81 2 1 185 1 173 3.55e-60 196
Msa0936470 AT3G01140.1 63.846 130 47 0 5 134 48 177 1.11e-59 197
Msa0936470 AT1G34670.1 56.643 143 62 0 1 143 1 143 1.64e-59 196
Msa0936470 AT5G26660.1 63.566 129 47 0 1 129 1 129 3.53e-59 194
Msa0936470 AT1G57560.2 61.832 131 50 0 1 131 1 131 3.56e-59 192
Msa0936470 AT4G34990.1 48.315 178 89 1 1 178 1 175 2.32e-58 190
Msa0936470 AT4G38620.1 60.305 131 52 0 1 131 1 131 2.49e-58 190
Msa0936470 AT4G12350.1 53.704 162 71 1 1 162 1 158 3.11e-58 190
Msa0936470 AT3G61250.1 60.465 129 51 0 1 129 1 129 4.71e-58 190
Msa0936470 AT2G16720.1 44.681 188 87 3 1 171 1 188 8.45e-58 188
Msa0936470 AT4G17785.2 54.248 153 69 1 1 152 1 153 2.37e-57 189
Msa0936470 AT5G61420.2 58.462 130 54 0 1 130 1 130 2.41e-57 190
Msa0936470 AT5G65230.1 58.647 133 55 0 1 133 1 133 2.70e-57 188
Msa0936470 AT4G17785.1 54.248 153 69 1 1 152 1 153 4.17e-57 189
Msa0936470 AT4G22680.1 51.852 162 78 0 1 162 1 162 4.56e-57 186
Msa0936470 AT4G01680.3 59.848 132 53 0 1 132 1 132 1.66e-56 184
Msa0936470 AT5G60890.1 58.915 129 53 0 1 129 1 129 2.11e-56 186
Msa0936470 AT4G09460.1 57.252 131 56 0 1 131 1 131 5.35e-56 182
Msa0936470 AT4G01680.1 59.848 132 53 0 1 132 1 132 5.82e-56 186
Msa0936470 AT5G07690.1 57.692 130 55 0 1 130 1 130 1.23e-55 185
Msa0936470 AT5G54230.1 56.164 146 60 1 1 146 1 142 4.40e-55 183
Msa0936470 AT1G22640.1 56.391 133 58 0 1 133 1 133 4.59e-55 181
Msa0936470 AT1G18570.1 60.305 131 51 1 1 130 1 131 9.54e-55 183
Msa0936470 AT1G66230.1 59.848 132 53 0 1 132 1 132 9.95e-55 181
Msa0936470 AT3G49690.1 65.254 118 40 1 1 117 1 118 2.46e-54 181
Msa0936470 AT5G07700.1 57.692 130 55 0 1 130 1 130 3.98e-54 181
Msa0936470 AT5G07700.2 57.692 130 55 0 1 130 1 130 3.98e-54 181
Msa0936470 AT5G23000.1 66.949 118 38 1 1 117 1 118 7.62e-54 180
Msa0936470 AT1G35515.1 56.589 129 56 0 1 129 1 129 8.89e-54 176
Msa0936470 AT5G57620.1 63.559 118 42 1 1 117 1 118 2.05e-53 179
Msa0936470 AT1G63910.1 47.159 176 74 1 1 157 1 176 2.10e-53 180
Msa0936470 AT5G14340.1 57.576 132 56 0 1 132 13 144 2.38e-53 177
Msa0936470 AT2G36890.1 62.205 127 47 1 1 126 1 127 3.22e-53 177
Msa0936470 AT2G36890.2 62.205 127 47 1 1 126 42 168 5.44e-53 178
Msa0936470 AT5G16600.1 58.015 131 55 0 1 131 1 131 8.86e-53 177
Msa0936470 AT3G13540.1 59.200 125 51 0 5 129 16 140 1.45e-52 174
Msa0936470 AT5G65790.1 64.407 118 41 1 1 117 1 118 1.55e-52 178
Msa0936470 AT3G12720.1 61.157 121 47 0 6 126 16 136 1.72e-52 176
Msa0936470 AT4G01680.2 54.861 144 53 1 1 132 1 144 1.77e-52 177
Msa0936470 AT1G74080.1 57.364 129 55 0 1 129 1 129 6.20e-52 175
Msa0936470 AT1G74430.1 55.385 130 58 0 1 130 1 130 7.21e-52 173
Msa0936470 AT3G13890.2 56.835 139 60 0 1 139 1 139 1.04e-51 175
Msa0936470 AT2G31180.1 50.000 168 70 2 1 157 1 165 2.32e-51 171
Msa0936470 AT3G47600.1 61.345 119 46 0 1 119 1 119 2.37e-51 174
Msa0936470 AT4G37780.1 61.864 118 44 1 1 117 1 118 2.94e-51 172
Msa0936470 AT3G23250.1 60.345 116 46 0 1 116 1 116 3.64e-51 172
Msa0936470 AT1G08810.1 61.017 118 46 0 1 118 1 118 6.99e-51 171
Msa0936470 AT5G62320.1 56.204 137 53 1 2 131 3 139 1.44e-50 169
Msa0936470 AT1G74650.1 60.504 119 47 0 1 119 1 119 3.07e-50 171
Msa0936470 AT1G18710.1 53.488 129 60 0 1 129 1 129 3.75e-50 168
Msa0936470 AT5G62470.2 59.664 119 48 0 1 119 1 119 4.83e-50 171
Msa0936470 AT2G47460.1 56.391 133 58 0 1 133 1 133 4.46e-49 169
Msa0936470 AT1G79180.1 60.684 117 46 0 2 118 4 120 5.47e-49 166
Msa0936470 AT3G13890.1 53.378 148 60 1 1 139 1 148 1.07e-48 167
Msa0936470 AT3G28910.1 59.016 122 50 0 1 122 1 122 1.09e-48 166
Msa0936470 AT5G62470.1 59.664 119 47 1 1 119 1 118 2.18e-48 166
Msa0936470 AT1G06180.1 58.621 116 48 0 1 116 1 116 6.64e-48 162
Msa0936470 AT1G16490.1 58.261 115 48 0 2 116 4 118 1.08e-47 162
Msa0936470 AT5G49330.1 58.621 116 48 0 1 116 1 116 1.22e-46 161
Msa0936470 AT3G62610.1 57.759 116 49 0 1 116 1 116 1.55e-46 161
Msa0936470 AT1G56160.1 57.391 115 49 0 2 116 4 118 1.54e-45 157
Msa0936470 AT5G12870.1 60.185 108 43 0 12 119 18 125 1.85e-45 157
Msa0936470 AT5G14750.1 52.667 150 66 3 13 161 17 162 2.68e-45 154
Msa0936470 AT3G08500.1 41.935 186 96 1 8 181 26 211 4.42e-44 155
Msa0936470 AT5G52600.1 54.615 130 50 1 9 129 9 138 6.30e-44 150
Msa0936470 AT3G12820.1 57.759 116 49 0 3 118 5 120 7.78e-44 151
Msa0936470 AT3G27920.1 61.905 105 40 0 13 117 15 119 6.07e-43 149
Msa0936470 AT5G40330.1 50.676 148 71 2 13 160 13 158 9.41e-43 148
Msa0936470 AT1G79180.2 47.297 148 45 1 2 116 4 151 1.63e-42 150
Msa0936470 AT4G25560.1 58.491 106 44 0 13 118 11 116 1.65e-41 146
Msa0936470 AT5G40350.1 44.848 165 74 3 12 159 17 181 3.57e-41 144
Msa0936470 AT5G35550.1 56.364 110 48 0 9 118 11 120 1.54e-40 143
Msa0936470 AT4G26930.1 56.364 110 47 1 12 121 19 127 3.46e-39 143
Msa0936470 AT3G27810.1 55.238 105 47 0 12 116 20 124 3.51e-39 139
Msa0936470 AT1G48000.1 44.444 144 72 2 12 147 32 175 6.84e-39 138
Msa0936470 AT2G32460.2 56.731 104 45 0 12 115 6 109 7.61e-39 144
Msa0936470 AT2G32460.1 56.731 104 45 0 12 115 18 121 7.66e-39 144
Msa0936470 AT3G01530.1 55.238 105 47 0 12 116 25 129 9.69e-39 137
Msa0936470 AT1G25340.1 49.180 122 62 0 13 134 19 140 2.10e-38 138
Msa0936470 AT3G48920.1 53.774 106 49 0 9 114 15 120 4.16e-38 137
Msa0936470 AT5G26660.2 66.667 87 29 0 43 129 12 98 6.20e-38 138
Msa0936470 AT5G55020.1 56.364 110 47 1 12 121 26 134 8.70e-38 142
Msa0936470 AT5G52260.1 57.273 110 47 0 9 118 9 118 8.76e-38 136
Msa0936470 AT2G26960.1 47.826 138 70 2 9 146 17 152 1.83e-37 139
Msa0936470 AT4G13480.1 58.252 103 43 0 13 115 7 109 3.05e-37 134
Msa0936470 AT3G30210.1 57.843 102 43 0 13 114 28 129 5.05e-37 134
Msa0936470 AT1G68320.1 39.024 205 104 3 12 208 19 210 5.60e-37 134
Msa0936470 AT1G18960.1 52.941 119 53 2 17 135 13 128 7.23e-37 135
Msa0936470 AT3G24310.1 57.282 103 44 0 13 115 19 121 1.50e-36 133
Msa0936470 AT3G11440.2 50.467 107 53 0 9 115 38 144 3.08e-36 137
Msa0936470 AT3G11440.3 50.467 107 53 0 9 115 38 144 9.49e-36 136
Msa0936470 AT3G11440.4 50.467 107 53 0 9 115 38 144 9.49e-36 136
Msa0936470 AT3G11440.1 50.467 107 53 0 9 115 38 144 9.49e-36 136
Msa0936470 AT5G06100.1 51.852 108 52 0 8 115 28 135 1.35e-35 134
Msa0936470 AT5G06100.5 51.852 108 52 0 8 115 28 135 3.38e-35 134
Msa0936470 AT5G06100.2 51.852 108 52 0 8 115 28 135 3.38e-35 134
Msa0936470 AT5G06100.3 51.852 108 52 0 8 115 28 135 3.38e-35 134
Msa0936470 AT5G06100.4 51.852 108 52 0 8 115 28 135 3.38e-35 134
Msa0936470 AT2G47190.1 46.957 115 61 0 8 122 16 130 2.20e-34 127
Msa0936470 AT5G59780.3 53.398 103 48 0 13 115 9 111 6.64e-34 125
Msa0936470 AT1G25340.2 46.721 122 60 1 13 134 19 135 9.11e-34 126
Msa0936470 AT3G46130.1 52.427 103 49 0 13 115 10 112 1.52e-33 125
Msa0936470 AT1G25340.3 46.721 122 60 1 13 134 19 135 1.92e-33 126
Msa0936470 AT1G66370.1 50.435 115 53 1 1 115 1 111 2.41e-33 124
Msa0936470 AT3G06490.1 51.304 115 56 0 8 122 15 129 1.44e-32 124
Msa0936470 AT1G66380.1 54.808 104 47 0 12 115 8 111 1.23e-31 116
Msa0936470 AT5G49620.1 49.565 115 58 0 8 122 22 136 3.42e-31 120
Msa0936470 AT1G56650.1 43.972 141 69 1 12 152 8 138 7.23e-31 117
Msa0936470 AT5G14750.3 48.571 140 58 6 23 161 2 128 2.14e-30 114
Msa0936470 AT3G53200.1 49.038 104 53 0 12 115 9 112 2.95e-30 115
Msa0936470 AT1G66390.1 53.846 104 48 0 12 115 8 111 8.32e-30 114
Msa0936470 AT2G26950.1 43.363 113 63 1 9 121 13 124 4.87e-28 113
Msa0936470 AT5G35550.2 64.865 74 26 0 45 118 50 123 5.57e-28 110
Msa0936470 AT5G40350.2 43.939 132 57 3 45 159 5 136 7.48e-28 107
Msa0936470 AT5G49620.2 44.186 129 58 1 8 122 22 150 1.13e-27 110
Msa0936470 AT5G59780.2 61.644 73 28 0 43 115 18 90 2.85e-27 107
Msa0936470 AT3G46130.3 62.500 72 27 0 44 115 9 80 3.05e-27 107
Msa0936470 AT3G46130.4 61.644 73 28 0 43 115 18 90 4.30e-27 107
Msa0936470 AT1G22640.3 58.667 75 31 0 59 133 2 76 4.39e-27 106
Msa0936470 AT3G47600.2 62.667 75 28 0 45 119 39 113 4.72e-27 109
Msa0936470 AT3G60460.1 43.750 112 61 2 9 119 8 118 1.88e-26 107
Msa0936470 AT1G71030.2 55.844 77 34 0 51 127 5 81 2.52e-26 103
Msa0936470 AT3G27810.2 58.333 72 30 0 45 116 4 75 2.65e-26 103
Msa0936470 AT3G27785.1 44.860 107 58 1 9 115 184 289 2.82e-26 108
Msa0936470 AT1G71030.1 55.844 77 34 0 51 127 19 95 3.48e-26 103
Msa0936470 AT3G12820.2 64.789 71 25 0 48 118 2 72 3.99e-26 103
Msa0936470 AT5G11050.1 43.810 105 58 1 11 115 102 205 1.93e-25 106
Msa0936470 AT2G23290.1 46.078 102 54 1 14 115 13 113 2.05e-25 104
Msa0936470 AT3G50060.1 45.098 102 55 1 14 115 6 106 3.66e-25 103
Msa0936470 AT5G67300.1 46.078 102 54 1 14 115 6 106 3.73e-25 103
Msa0936470 AT5G58850.1 43.810 105 58 1 11 115 102 205 4.11e-25 105
Msa0936470 AT4G18770.1 40.909 110 64 1 9 118 212 320 5.00e-25 105
Msa0936470 AT4G37260.1 45.098 102 55 1 14 115 13 113 7.68e-25 103
Msa0936470 AT1G69560.1 44.444 108 59 1 9 116 102 208 8.89e-25 103
Msa0936470 AT5G40360.1 42.718 103 58 1 12 114 156 257 9.40e-25 103
Msa0936470 AT1G69560.2 44.444 108 59 1 9 116 118 224 9.50e-25 103
Msa0936470 AT3G53200.2 58.904 73 30 0 43 115 7 79 1.49e-24 99.8
Msa0936470 AT2G39880.1 46.729 107 55 2 9 115 46 150 5.10e-24 101
Msa0936470 AT1G17950.1 33.854 192 91 5 14 173 5 192 1.32e-23 98.2
Msa0936470 AT5G02320.1 45.631 103 55 1 14 116 127 228 1.43e-23 102
Msa0936470 AT5G02320.2 45.631 103 55 1 14 116 127 228 1.43e-23 102
Msa0936470 AT5G02320.3 45.631 103 55 1 14 116 67 168 1.82e-23 101
Msa0936470 AT3G09230.1 32.418 182 115 4 14 190 55 233 1.91e-23 100
Msa0936470 AT3G09370.2 45.098 102 55 1 14 115 135 235 2.97e-23 100
Msa0936470 AT3G09370.1 45.098 102 55 1 14 115 130 230 3.04e-23 100
Msa0936470 AT3G09370.3 45.098 102 55 1 14 115 143 243 3.92e-23 100
Msa0936470 AT3G55730.1 44.340 106 58 1 14 119 56 160 4.06e-23 99.4
Msa0936470 AT1G26780.1 44.118 102 56 1 14 115 98 198 8.96e-23 96.7
Msa0936470 AT1G26780.2 44.118 102 56 1 14 115 98 198 1.55e-22 97.4
Msa0936470 AT5G17800.1 36.806 144 83 3 14 156 93 229 1.57e-22 96.7
Msa0936470 AT5G14750.4 50.000 104 47 3 59 161 2 101 3.92e-22 91.3
Msa0936470 AT5G14750.2 50.000 104 47 3 59 161 2 101 3.92e-22 91.3
Msa0936470 AT1G66380.3 62.500 72 27 0 44 115 7 78 6.28e-22 89.7
Msa0936470 AT2G25230.1 38.983 118 69 2 9 124 21 137 6.66e-22 93.2
Msa0936470 AT5G11510.5 40.777 103 60 1 14 116 81 182 6.22e-21 94.4
Msa0936470 AT5G11510.3 40.777 103 60 1 14 116 81 182 6.55e-21 94.7
Msa0936470 AT5G11510.1 40.777 103 60 1 14 116 81 182 6.55e-21 94.7
Msa0936470 AT5G11510.4 40.777 103 60 1 14 116 81 182 6.55e-21 94.7
Msa0936470 AT5G11510.2 40.777 103 60 1 14 116 81 182 6.93e-21 94.4
Msa0936470 AT3G29020.1 39.806 103 61 1 14 116 65 166 7.50e-21 90.1
Msa0936470 AT3G29020.2 39.806 103 61 1 14 116 67 168 2.16e-20 90.5
Msa0936470 AT4G33450.1 40.187 107 63 1 9 115 14 119 2.36e-20 89.4
Msa0936470 AT1G73410.1 45.098 102 55 1 14 115 6 106 3.89e-20 88.6
Msa0936470 AT1G73410.2 45.098 102 55 1 14 115 6 106 1.08e-19 86.3
Msa0936470 AT3G23250.2 60.345 58 23 0 59 116 2 59 1.09e-19 87.0
Msa0936470 AT4G32730.1 39.806 103 61 1 14 116 87 188 1.41e-19 90.5
Msa0936470 AT4G32730.5 39.806 103 61 1 14 116 87 188 1.44e-19 90.5
Msa0936470 AT4G32730.4 39.806 103 61 1 14 116 87 188 1.44e-19 90.5
Msa0936470 AT4G32730.3 39.806 103 61 1 14 116 87 188 1.44e-19 90.5
Msa0936470 AT4G32730.2 39.806 103 61 1 14 116 87 188 1.44e-19 90.5
Msa0936470 AT5G61420.1 64.000 50 18 0 81 130 2 51 2.84e-18 84.3
Msa0936470 AT5G40430.1 38.393 112 67 2 9 120 49 158 3.02e-18 83.6
Msa0936470 AT5G15310.3 66.667 51 16 1 88 137 9 59 7.65e-17 79.3
Msa0936470 AT1G66380.2 43.210 81 46 0 12 92 8 88 1.75e-16 74.7
Msa0936470 AT2G37630.1 40.404 99 57 1 14 110 4 102 2.23e-16 79.7
Msa0936470 AT4G28110.2 70.732 41 12 0 88 128 4 44 3.41e-16 76.6
Msa0936470 AT4G00540.2 35.185 108 66 2 12 116 101 207 2.89e-15 76.6
Msa0936470 AT5G39700.1 39.423 104 62 1 15 118 57 159 3.72e-15 73.6
Msa0936470 AT4G00540.1 35.185 108 66 2 12 116 99 205 4.42e-15 76.3
Msa0936470 AT2G02820.3 36.364 99 62 1 17 115 33 130 4.85e-15 75.5
Msa0936470 AT2G02820.1 36.364 99 62 1 17 115 33 130 6.78e-15 75.9
Msa0936470 AT2G02820.2 36.364 99 62 1 17 115 33 130 1.05e-14 75.5
Msa0936470 AT5G59780.1 60.870 46 18 0 70 115 1 46 1.20e-14 71.6
Msa0936470 AT1G14350.2 36.364 99 62 1 17 115 28 125 1.44e-14 74.7
Msa0936470 AT1G14350.1 36.364 99 62 1 17 115 28 125 1.44e-14 74.7
Msa0936470 AT3G46130.2 60.870 46 18 0 70 115 1 46 1.71e-14 71.6
Msa0936470 AT4G25560.2 58.333 48 20 0 71 118 3 50 3.50e-14 71.2
Msa0936470 AT1G74430.2 51.852 54 26 0 77 130 8 61 6.32e-14 70.1
Msa0936470 AT1G22640.2 56.522 46 20 0 88 133 16 61 2.69e-13 68.2
Msa0936470 AT5G14340.2 50.943 53 25 1 81 132 2 54 2.85e-13 67.8
Msa0936470 AT1G74650.3 60.465 43 17 0 77 119 1 43 1.37e-11 64.3
Msa0936470 AT3G28910.2 56.522 46 20 0 77 122 1 46 3.60e-11 63.2

Find 54 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTACTATTGAAATTAT+TGG 0.084089 6_3:+7213170 None:intergenic
TTCATTTGTGGATGGTATTT+TGG 0.129696 6_3:-7213040 Msa0936470:CDS
GGCAACCTTTCCAGAAATTT+TGG 0.141770 6_3:-7212998 Msa0936470:CDS
AAGAAAGAAGCTTATGAAAA+TGG 0.185126 6_3:-7213655 Msa0936470:CDS
AAAGAAGCATCCAAAATTTC+TGG 0.229497 6_3:+7212988 None:intergenic
TGTCAATAACACCCCAATAT+TGG 0.259810 6_3:-7213529 Msa0936470:CDS
GAGCTGATTATTACCCTTCA+TGG 0.280333 6_3:-7214737 Msa0936470:CDS
CCAATGTGAAAAGAGGTTTA+TGG 0.307550 6_3:-7215231 Msa0936470:CDS
ACAATGATGTCAAGAATTAT+TGG 0.314255 6_3:-7213689 Msa0936470:CDS
ACATCATTGTCTGTTCTTCC+AGG 0.314381 6_3:+7213702 None:intergenic
CCAATTTCCAATTCCATGAT+TGG 0.322212 6_3:+7215171 None:intergenic
GAAACTGGCTTATGAGTTAC+TGG 0.324766 6_3:+7213624 None:intergenic
ATTACCCTTCATGGAGCTAT+AGG 0.324847 6_3:-7214728 Msa0936470:CDS
TCAGAAATCACTTGTGAAAC+TGG 0.330362 6_3:+7213609 None:intergenic
GGACAAGGACAGTGAGATTA+GGG 0.332557 6_3:-7213019 Msa0936470:CDS
CCAATCATGGAATTGGAAAT+TGG 0.338514 6_3:-7215171 Msa0936470:CDS
TATGTAGCCAATCATGGAAT+TGG 0.348613 6_3:-7215178 Msa0936470:CDS
AATTCTCTTGGTTTGTGAAT+TGG 0.359504 6_3:+7213454 None:intergenic
TCCAATAATTTCAATAGTAA+TGG 0.385542 6_3:-7213171 Msa0936470:CDS
TGGACAAGGACAGTGAGATT+AGG 0.386964 6_3:-7213020 Msa0936470:CDS
TGTTATTGACAAAATTCATT+TGG 0.391041 6_3:+7213541 None:intergenic
ATAGGTGTGGTAAGAGTTGC+AGG 0.392561 6_3:-7214823 Msa0936470:CDS
AAATTAACTCTAACTTTGAA+TGG 0.399442 6_3:-7213320 Msa0936470:CDS
CATGTTGTTGGAAATTCTCT+TGG 0.405895 6_3:+7213442 None:intergenic
CTTCACTTAAGACATGTTGT+TGG 0.429030 6_3:+7213430 None:intergenic
AGAAAGAAGCTTATGAAAAT+GGG 0.435037 6_3:-7213654 Msa0936470:CDS
ATGTCATCATTGAGCCTCTC+AGG 0.445638 6_3:-7213219 Msa0936470:CDS
TGAATTTCTGTCCACACTAA+AGG 0.451803 6_3:+7213273 None:intergenic
GATAAAACCAATGTGAAAAG+AGG 0.459392 6_3:-7215238 Msa0936470:CDS
CTTGCTTATGTAGCCAATCA+TGG 0.462672 6_3:-7215184 Msa0936470:CDS
TCACAAGTGATTTCTGACTT+AGG 0.476952 6_3:-7213603 Msa0936470:CDS
ATAATCAGCTCTTCTTCCTC+AGG 0.485175 6_3:+7214749 None:intergenic
AAACTATCATGCTTGAGATC+AGG 0.493104 6_3:+7214776 None:intergenic
CATCTTCTTCTAATCTCACT+AGG 0.499551 6_3:-7213386 Msa0936470:CDS
GTGTTGCAAGAGTACGAAAT+CGG 0.514008 6_3:+7213354 None:intergenic
AGCATCCAAAATTTCTGGAA+AGG 0.524013 6_3:+7212993 None:intergenic
TTCAACAATGTGACATACAA+AGG 0.524894 6_3:-7213245 Msa0936470:CDS
AAACAAGGTGGTTCAAGTGA+AGG 0.532114 6_3:-7213141 Msa0936470:CDS
TGCTTCCTATAGCTCCATGA+AGG 0.532634 6_3:+7214723 None:intergenic
ACAACTGTTCCAAAGAAAGC+AGG 0.539721 6_3:-7215148 Msa0936470:intron
CAAGGTGATAAGAAGTGTGA+AGG 0.541010 6_3:-7213081 Msa0936470:CDS
TCAGGGAATTCATTTGTGGA+TGG 0.549178 6_3:-7213048 Msa0936470:CDS
TCAACAATGTGACATACAAA+GGG 0.563931 6_3:-7213244 Msa0936470:CDS
TTCATGGAGCTATAGGAAGC+AGG 0.564282 6_3:-7214721 Msa0936470:intron
CACTTTGCATTATACCTGAG+AGG 0.565904 6_3:+7213205 None:intergenic
AAGGTGATAAGAAGTGTGAA+GGG 0.575439 6_3:-7213080 Msa0936470:CDS
GATGCAAGTAAAGAATATCA+AGG 0.593545 6_3:-7213099 Msa0936470:CDS
GAGAGTTTGATGTTGTTGTG+AGG 0.612357 6_3:+7213568 None:intergenic
TCAGGTATAATGCAAAGTGA+AGG 0.630289 6_3:-7213201 Msa0936470:CDS
ACAATGATGAGCCTTTAGTG+TGG 0.648778 6_3:-7213284 Msa0936470:CDS
AAGAGGTTTATGGACTCCTG+AGG 0.664726 6_3:-7215221 Msa0936470:CDS
GCTTCCTATAGCTCCATGAA+GGG 0.674390 6_3:+7214724 None:intergenic
AGTAATGGAGATGATAAACA+AGG 0.690474 6_3:-7213156 Msa0936470:CDS
AATGGAGATGATAAACAAGG+TGG 0.713993 6_3:-7213153 Msa0936470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_3:7213582-7213601 None:intergenic 10.0%
!! CAAAATTAAATAAAAAGAAA+GGG + chr6_3:7214011-7214030 None:intergenic 10.0%
!! ACAAAATTAAATAAAAAGAA+AGG + chr6_3:7214012-7214031 None:intergenic 10.0%
!!! TTTTTAGATGTATAAAAAAA+TGG + chr6_3:7213582-7213601 None:intergenic 10.0%
!! CAAAATTAAATAAAAAGAAA+GGG + chr6_3:7214011-7214030 None:intergenic 10.0%
!! ACAAAATTAAATAAAAAGAA+AGG + chr6_3:7214012-7214031 None:intergenic 10.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_3:7213958-7213977 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_3:7214476-7214495 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_3:7214491-7214510 Msa0936470:intron 15.0%
!! TACATCAAGAAAATTAAATA+AGG + chr6_3:7213958-7213977 None:intergenic 15.0%
!! AAAACAATAAAATCAATGTT+TGG + chr6_3:7214476-7214495 None:intergenic 15.0%
!!! GTTTTTTTAATTAATGTAGA+TGG - chr6_3:7214491-7214510 Msa0936470:intron 15.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_3:7213208-7213227 Msa0936470:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_3:7213266-7213285 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_3:7213664-7213683 Msa0936470:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_3:7213665-7213684 Msa0936470:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_3:7213702-7213721 Msa0936470:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_3:7213800-7213819 Msa0936470:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_3:7213893-7213912 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_3:7214032-7214051 Msa0936470:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_3:7214033-7214052 Msa0936470:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_3:7214042-7214061 None:intergenic 20.0%
!!! GAGTTTTAAATGTATCAAAA+TGG - chr6_3:7214232-7214251 Msa0936470:intron 20.0%
!!! TTTTAAATGTATCAAAATGG+AGG - chr6_3:7214235-7214254 Msa0936470:intron 20.0%
!!! TCTTATCGTTTTTTAATTTG+TGG + chr6_3:7214266-7214285 None:intergenic 20.0%
!!! TGTTAAATTTTACTTAGTGT+TGG + chr6_3:7214349-7214368 None:intergenic 20.0%
!!! TTATGATCTTTTATCTCAAA+AGG + chr6_3:7214434-7214453 None:intergenic 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_3:7214457-7214476 None:intergenic 20.0%
!! TGTTATTGACAAAATTCATT+TGG + chr6_3:7214699-7214718 None:intergenic 20.0%
!! AAATTAACTCTAACTTTGAA+TGG - chr6_3:7214917-7214936 Msa0936470:intron 20.0%
!! TCCAATAATTTCAATAGTAA+TGG - chr6_3:7215066-7215085 Msa0936470:intron 20.0%
!! TCCATTACTATTGAAATTAT+TGG + chr6_3:7215070-7215089 None:intergenic 20.0%
!! ATCTCAAATCTTATATATTG+AGG - chr6_3:7213208-7213227 Msa0936470:CDS 20.0%
!! TTTCAAACTATTTATGAACA+TGG + chr6_3:7213266-7213285 None:intergenic 20.0%
!! AAAAAAATGCATAATTCACA+TGG - chr6_3:7213664-7213683 Msa0936470:CDS 20.0%
!! AAAAAATGCATAATTCACAT+GGG - chr6_3:7213665-7213684 Msa0936470:CDS 20.0%
!!! CTATATGTTTTAGTATAACA+TGG - chr6_3:7213702-7213721 Msa0936470:CDS 20.0%
!! GAAAATGAGATTTAATATCT+AGG - chr6_3:7213800-7213819 Msa0936470:intron 20.0%
!!! TTTTTACTTATAATTGAGAC+TGG + chr6_3:7213893-7213912 None:intergenic 20.0%
!!! TTGAAAACCTGTTTTATTAA+AGG - chr6_3:7214032-7214051 Msa0936470:intron 20.0%
!!! TGAAAACCTGTTTTATTAAA+GGG - chr6_3:7214033-7214052 Msa0936470:intron 20.0%
!! AAAATACCCTTTAATAAAAC+AGG + chr6_3:7214042-7214061 None:intergenic 20.0%
!!! GAGTTTTAAATGTATCAAAA+TGG - chr6_3:7214232-7214251 Msa0936470:intron 20.0%
!!! TTTTAAATGTATCAAAATGG+AGG - chr6_3:7214235-7214254 Msa0936470:intron 20.0%
!!! TCTTATCGTTTTTTAATTTG+TGG + chr6_3:7214266-7214285 None:intergenic 20.0%
!!! TGTTAAATTTTACTTAGTGT+TGG + chr6_3:7214349-7214368 None:intergenic 20.0%
!!! TTATGATCTTTTATCTCAAA+AGG + chr6_3:7214434-7214453 None:intergenic 20.0%
!!! TTGGAATGTGATTTTAAATT+AGG + chr6_3:7214457-7214476 None:intergenic 20.0%
!! TGTTATTGACAAAATTCATT+TGG + chr6_3:7214699-7214718 None:intergenic 20.0%
!! AAATTAACTCTAACTTTGAA+TGG - chr6_3:7214917-7214936 Msa0936470:intron 20.0%
!! TCCAATAATTTCAATAGTAA+TGG - chr6_3:7215066-7215085 Msa0936470:intron 20.0%
!! TCCATTACTATTGAAATTAT+TGG + chr6_3:7215070-7215089 None:intergenic 20.0%
!!! TATCGTGTGTTATTTTAAGT+CGG - chr6_3:7213305-7213324 Msa0936470:CDS 25.0%
! ATTATATAACACTCAGTATC+CGG + chr6_3:7213339-7213358 None:intergenic 25.0%
!!! TTTTACTTGAACTTGTTTTC+AGG - chr6_3:7213386-7213405 Msa0936470:CDS 25.0%
!!! TTTACTTGAACTTGTTTTCA+GGG - chr6_3:7213387-7213406 Msa0936470:CDS 25.0%
! GATGTATAAAAAAATGGAAC+AGG + chr6_3:7213576-7213595 None:intergenic 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_3:7214403-7214422 Msa0936470:intron 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_3:7214548-7214567 Msa0936470:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_3:7214582-7214601 Msa0936470:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_3:7214583-7214602 Msa0936470:intron 25.0%
!! TATTGAACTTGATTTTGCAT+TGG + chr6_3:7214760-7214779 None:intergenic 25.0%
!!! TATCGTGTGTTATTTTAAGT+CGG - chr6_3:7213305-7213324 Msa0936470:CDS 25.0%
! ATTATATAACACTCAGTATC+CGG + chr6_3:7213339-7213358 None:intergenic 25.0%
!!! TTTTACTTGAACTTGTTTTC+AGG - chr6_3:7213386-7213405 Msa0936470:CDS 25.0%
!!! TTTACTTGAACTTGTTTTCA+GGG - chr6_3:7213387-7213406 Msa0936470:CDS 25.0%
! GATGTATAAAAAAATGGAAC+AGG + chr6_3:7213576-7213595 None:intergenic 25.0%
! ATGACATGAATCTCAAATTT+AGG - chr6_3:7214403-7214422 Msa0936470:intron 25.0%
! ACAATGATGTCAAGAATTAT+TGG - chr6_3:7214548-7214567 Msa0936470:intron 25.0%
! AAGAAAGAAGCTTATGAAAA+TGG - chr6_3:7214582-7214601 Msa0936470:intron 25.0%
! AGAAAGAAGCTTATGAAAAT+GGG - chr6_3:7214583-7214602 Msa0936470:intron 25.0%
!! TATTGAACTTGATTTTGCAT+TGG + chr6_3:7214760-7214779 None:intergenic 25.0%
!!! ACATTGGTTTTATCACAACA+AGG + chr6_3:7212993-7213012 None:intergenic 30.0%
GATAAAACCAATGTGAAAAG+AGG - chr6_3:7212999-7213018 Msa0936470:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_3:7213129-7213148 None:intergenic 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_3:7213777-7213796 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_3:7214125-7214144 None:intergenic 30.0%
TCCTAAAATAAGAGTTCGTT+TGG - chr6_3:7214310-7214329 Msa0936470:intron 30.0%
!!! TTTTACTTAGTGTTGGCTTA+AGG + chr6_3:7214342-7214361 None:intergenic 30.0%
! TTTTGTGTGTTCCAATATTG+GGG + chr6_3:7214722-7214741 None:intergenic 30.0%
! CTTTTGTGTGTTCCAATATT+GGG + chr6_3:7214723-7214742 None:intergenic 30.0%
! TCTTTTGTGTGTTCCAATAT+TGG + chr6_3:7214724-7214743 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_3:7214786-7214805 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_3:7214992-7215011 Msa0936470:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_3:7214993-7215012 Msa0936470:intron 30.0%
! AGTAATGGAGATGATAAACA+AGG - chr6_3:7215081-7215100 Msa0936470:intron 30.0%
GATGCAAGTAAAGAATATCA+AGG - chr6_3:7215138-7215157 Msa0936470:intron 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_3:7215185-7215204 Msa0936470:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_3:7215197-7215216 Msa0936470:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_3:7215252-7215271 None:intergenic 30.0%
!!! ACATTGGTTTTATCACAACA+AGG + chr6_3:7212993-7213012 None:intergenic 30.0%
GATAAAACCAATGTGAAAAG+AGG - chr6_3:7212999-7213018 Msa0936470:CDS 30.0%
AAAACCATGTTCGTGAATAA+AGG + chr6_3:7213129-7213148 None:intergenic 30.0%
TGAAGAAGCAAATATGTACA+TGG + chr6_3:7213777-7213796 None:intergenic 30.0%
AGTTCGGTCTTAAATATAAG+AGG + chr6_3:7214125-7214144 None:intergenic 30.0%
TCCTAAAATAAGAGTTCGTT+TGG - chr6_3:7214310-7214329 Msa0936470:intron 30.0%
!!! TTTTACTTAGTGTTGGCTTA+AGG + chr6_3:7214342-7214361 None:intergenic 30.0%
! TTTTGTGTGTTCCAATATTG+GGG + chr6_3:7214722-7214741 None:intergenic 30.0%
! CTTTTGTGTGTTCCAATATT+GGG + chr6_3:7214723-7214742 None:intergenic 30.0%
! TCTTTTGTGTGTTCCAATAT+TGG + chr6_3:7214724-7214743 None:intergenic 30.0%
!! AATTCTCTTGGTTTGTGAAT+TGG + chr6_3:7214786-7214805 None:intergenic 30.0%
TTCAACAATGTGACATACAA+AGG - chr6_3:7214992-7215011 Msa0936470:intron 30.0%
TCAACAATGTGACATACAAA+GGG - chr6_3:7214993-7215012 Msa0936470:intron 30.0%
! AGTAATGGAGATGATAAACA+AGG - chr6_3:7215081-7215100 Msa0936470:intron 30.0%
GATGCAAGTAAAGAATATCA+AGG - chr6_3:7215138-7215157 Msa0936470:intron 30.0%
!! ATTTTCAGGGAATTCATTTG+TGG - chr6_3:7215185-7215204 Msa0936470:CDS 30.0%
! TTCATTTGTGGATGGTATTT+TGG - chr6_3:7215197-7215216 Msa0936470:CDS 30.0%
!! AAAGAAGCATCCAAAATTTC+TGG + chr6_3:7215252-7215271 None:intergenic 30.0%
!!! TTGGTTTTATCACAACAAGG+AGG + chr6_3:7212990-7213009 None:intergenic 35.0%
! CCATAAACCTCTTTTCACAT+TGG + chr6_3:7213009-7213028 None:intergenic 35.0%
CCAATGTGAAAAGAGGTTTA+TGG - chr6_3:7213006-7213025 Msa0936470:CDS 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_3:7213035-7213054 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_3:7213059-7213078 Msa0936470:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_3:7213069-7213088 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_3:7213066-7213085 Msa0936470:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_3:7213101-7213120 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_3:7213122-7213141 Msa0936470:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_3:7213177-7213196 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_3:7213220-7213239 Msa0936470:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_3:7213396-7213415 Msa0936470:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_3:7213464-7213483 None:intergenic 35.0%
! ACTTTTGTACTGTGAACAGA+TGG + chr6_3:7213835-7213854 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_3:7214141-7214160 None:intergenic 35.0%
CTTTAGATCTTCGTCAACTT+TGG + chr6_3:7214179-7214198 None:intergenic 35.0%
! GTTGACGAAGATCTAAAGTT+AGG - chr6_3:7214181-7214200 Msa0936470:intron 35.0%
CTCAAAGTGAATAAATCGTG+AGG - chr6_3:7214210-7214229 Msa0936470:intron 35.0%
!!! GCCAAACGAACTCTTATTTT+AGG + chr6_3:7214314-7214333 None:intergenic 35.0%
!! TTAGTGTTGGCTTAAGGATA+AGG + chr6_3:7214336-7214355 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_3:7214517-7214536 Msa0936470:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_3:7214631-7214650 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_3:7214634-7214653 Msa0936470:intron 35.0%
TGTCAATAACACCCCAATAT+TGG - chr6_3:7214708-7214727 Msa0936470:intron 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_3:7214798-7214817 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_3:7214810-7214829 None:intergenic 35.0%
CATCTTCTTCTAATCTCACT+AGG - chr6_3:7214851-7214870 Msa0936470:intron 35.0%
TGAATTTCTGTCCACACTAA+AGG + chr6_3:7214967-7214986 None:intergenic 35.0%
TCAGGTATAATGCAAAGTGA+AGG - chr6_3:7215036-7215055 Msa0936470:intron 35.0%
AATGGAGATGATAAACAAGG+TGG - chr6_3:7215084-7215103 Msa0936470:intron 35.0%
! AAGGTGATAAGAAGTGTGAA+GGG - chr6_3:7215157-7215176 Msa0936470:CDS 35.0%
! TGTGAAGGGAATTCATTTTC+AGG - chr6_3:7215171-7215190 Msa0936470:CDS 35.0%
! GTGAAGGGAATTCATTTTCA+GGG - chr6_3:7215172-7215191 Msa0936470:CDS 35.0%
! AGCATCCAAAATTTCTGGAA+AGG + chr6_3:7215247-7215266 None:intergenic 35.0%
!!! TTGGTTTTATCACAACAAGG+AGG + chr6_3:7212990-7213009 None:intergenic 35.0%
! CCATAAACCTCTTTTCACAT+TGG + chr6_3:7213009-7213028 None:intergenic 35.0%
CCAATGTGAAAAGAGGTTTA+TGG - chr6_3:7213006-7213025 Msa0936470:CDS 35.0%
!!! AGTATTTTAGCATCTTCCTC+AGG + chr6_3:7213035-7213054 None:intergenic 35.0%
TATGTAGCCAATCATGGAAT+TGG - chr6_3:7213059-7213078 Msa0936470:CDS 35.0%
CCAATTTCCAATTCCATGAT+TGG + chr6_3:7213069-7213088 None:intergenic 35.0%
CCAATCATGGAATTGGAAAT+TGG - chr6_3:7213066-7213085 Msa0936470:CDS 35.0%
AGGAAAAAACCTGCTTTCTT+TGG + chr6_3:7213101-7213120 None:intergenic 35.0%
GATTCCTTTATTCACGAACA+TGG - chr6_3:7213122-7213141 Msa0936470:CDS 35.0%
TATCACATTCACAACCACAT+TGG + chr6_3:7213177-7213196 None:intergenic 35.0%
ATATATTGAGGCCACATTTG+CGG - chr6_3:7213220-7213239 Msa0936470:CDS 35.0%
!! ACTTGTTTTCAGGGTTGAAT+AGG - chr6_3:7213396-7213415 Msa0936470:CDS 35.0%
AAACTATCATGCTTGAGATC+AGG + chr6_3:7213464-7213483 None:intergenic 35.0%
! ACTTTTGTACTGTGAACAGA+TGG + chr6_3:7213835-7213854 None:intergenic 35.0%
AAGACTACTAGCTACTAGTT+CGG + chr6_3:7214141-7214160 None:intergenic 35.0%
CTTTAGATCTTCGTCAACTT+TGG + chr6_3:7214179-7214198 None:intergenic 35.0%
! GTTGACGAAGATCTAAAGTT+AGG - chr6_3:7214181-7214200 Msa0936470:intron 35.0%
CTCAAAGTGAATAAATCGTG+AGG - chr6_3:7214210-7214229 Msa0936470:intron 35.0%
!!! GCCAAACGAACTCTTATTTT+AGG + chr6_3:7214314-7214333 None:intergenic 35.0%
!! TTAGTGTTGGCTTAAGGATA+AGG + chr6_3:7214336-7214355 None:intergenic 35.0%
TGTATTGCAAAAAGACTACC+TGG - chr6_3:7214517-7214536 Msa0936470:intron 35.0%
TCAGAAATCACTTGTGAAAC+TGG + chr6_3:7214631-7214650 None:intergenic 35.0%
TCACAAGTGATTTCTGACTT+AGG - chr6_3:7214634-7214653 Msa0936470:intron 35.0%
TGTCAATAACACCCCAATAT+TGG - chr6_3:7214708-7214727 Msa0936470:intron 35.0%
CATGTTGTTGGAAATTCTCT+TGG + chr6_3:7214798-7214817 None:intergenic 35.0%
CTTCACTTAAGACATGTTGT+TGG + chr6_3:7214810-7214829 None:intergenic 35.0%
CATCTTCTTCTAATCTCACT+AGG - chr6_3:7214851-7214870 Msa0936470:intron 35.0%
TGAATTTCTGTCCACACTAA+AGG + chr6_3:7214967-7214986 None:intergenic 35.0%
TCAGGTATAATGCAAAGTGA+AGG - chr6_3:7215036-7215055 Msa0936470:intron 35.0%
AATGGAGATGATAAACAAGG+TGG - chr6_3:7215084-7215103 Msa0936470:intron 35.0%
! AAGGTGATAAGAAGTGTGAA+GGG - chr6_3:7215157-7215176 Msa0936470:CDS 35.0%
! TGTGAAGGGAATTCATTTTC+AGG - chr6_3:7215171-7215190 Msa0936470:CDS 35.0%
! GTGAAGGGAATTCATTTTCA+GGG - chr6_3:7215172-7215191 Msa0936470:CDS 35.0%
! AGCATCCAAAATTTCTGGAA+AGG + chr6_3:7215247-7215266 None:intergenic 35.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_3:7213053-7213072 Msa0936470:CDS 40.0%
ACAACTGTTCCAAAGAAAGC+AGG - chr6_3:7213089-7213108 Msa0936470:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_3:7213121-7213140 None:intergenic 40.0%
!! TTTTAAGTCGGTCTTTGAGC+CGG - chr6_3:7213317-7213336 Msa0936470:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_3:7213401-7213420 Msa0936470:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_3:7213472-7213491 Msa0936470:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_3:7213491-7213510 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_3:7213500-7213519 Msa0936470:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_3:7213509-7213528 Msa0936470:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_3:7214140-7214159 Msa0936470:intron 40.0%
! CGAAGATCTAAAGTTAGGTG+AGG - chr6_3:7214186-7214205 Msa0936470:intron 40.0%
AACGATAAGAGCGACTAAGT+AGG - chr6_3:7214276-7214295 Msa0936470:intron 40.0%
ACGATAAGAGCGACTAAGTA+GGG - chr6_3:7214277-7214296 Msa0936470:intron 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_3:7214538-7214557 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_3:7214616-7214635 None:intergenic 40.0%
GAGAGTTTGATGTTGTTGTG+AGG + chr6_3:7214672-7214691 None:intergenic 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_3:7214886-7214905 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_3:7214953-7214972 Msa0936470:intron 40.0%
CACTTTGCATTATACCTGAG+AGG + chr6_3:7215035-7215054 None:intergenic 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_3:7215096-7215115 Msa0936470:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_3:7215104-7215123 Msa0936470:intron 40.0%
! CAAGGTGATAAGAAGTGTGA+AGG - chr6_3:7215156-7215175 Msa0936470:CDS 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_3:7215189-7215208 Msa0936470:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_3:7215203-7215222 Msa0936470:CDS 40.0%
! GGCAACCTTTCCAGAAATTT+TGG - chr6_3:7215239-7215258 Msa0936470:CDS 40.0%
CTTGCTTATGTAGCCAATCA+TGG - chr6_3:7213053-7213072 Msa0936470:CDS 40.0%
ACAACTGTTCCAAAGAAAGC+AGG - chr6_3:7213089-7213108 Msa0936470:CDS 40.0%
GTTCGTGAATAAAGGAATCG+AGG + chr6_3:7213121-7213140 None:intergenic 40.0%
!! TTTTAAGTCGGTCTTTGAGC+CGG - chr6_3:7213317-7213336 Msa0936470:CDS 40.0%
!! TTTTCAGGGTTGAATAGGTG+TGG - chr6_3:7213401-7213420 Msa0936470:CDS 40.0%
!! GCATGATAGTTTTACACCTG+AGG - chr6_3:7213472-7213491 Msa0936470:CDS 40.0%
ATAATCAGCTCTTCTTCCTC+AGG + chr6_3:7213491-7213510 None:intergenic 40.0%
GAGCTGATTATTACCCTTCA+TGG - chr6_3:7213500-7213519 Msa0936470:CDS 40.0%
ATTACCCTTCATGGAGCTAT+AGG - chr6_3:7213509-7213528 Msa0936470:CDS 40.0%
GAACTAGTAGCTAGTAGTCT+TGG - chr6_3:7214140-7214159 Msa0936470:intron 40.0%
! CGAAGATCTAAAGTTAGGTG+AGG - chr6_3:7214186-7214205 Msa0936470:intron 40.0%
AACGATAAGAGCGACTAAGT+AGG - chr6_3:7214276-7214295 Msa0936470:intron 40.0%
ACGATAAGAGCGACTAAGTA+GGG - chr6_3:7214277-7214296 Msa0936470:intron 40.0%
ACATCATTGTCTGTTCTTCC+AGG + chr6_3:7214538-7214557 None:intergenic 40.0%
! GAAACTGGCTTATGAGTTAC+TGG + chr6_3:7214616-7214635 None:intergenic 40.0%
GAGAGTTTGATGTTGTTGTG+AGG + chr6_3:7214672-7214691 None:intergenic 40.0%
! GTGTTGCAAGAGTACGAAAT+CGG + chr6_3:7214886-7214905 None:intergenic 40.0%
ACAATGATGAGCCTTTAGTG+TGG - chr6_3:7214953-7214972 Msa0936470:intron 40.0%
CACTTTGCATTATACCTGAG+AGG + chr6_3:7215035-7215054 None:intergenic 40.0%
AAACAAGGTGGTTCAAGTGA+AGG - chr6_3:7215096-7215115 Msa0936470:intron 40.0%
! TGGTTCAAGTGAAGGTTTTG+AGG - chr6_3:7215104-7215123 Msa0936470:intron 40.0%
! CAAGGTGATAAGAAGTGTGA+AGG - chr6_3:7215156-7215175 Msa0936470:CDS 40.0%
TCAGGGAATTCATTTGTGGA+TGG - chr6_3:7215189-7215208 Msa0936470:CDS 40.0%
!! TGTGGATGGTATTTTGGACA+AGG - chr6_3:7215203-7215222 Msa0936470:CDS 40.0%
! GGCAACCTTTCCAGAAATTT+TGG - chr6_3:7215239-7215258 Msa0936470:CDS 40.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_3:7213016-7213035 Msa0936470:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_3:7213160-7213179 Msa0936470:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_3:7213414-7213433 Msa0936470:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_3:7213516-7213535 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_3:7213517-7213536 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_3:7213516-7213535 Msa0936470:CDS 45.0%
ATAAGAGCGACTAAGTAGGG+CGG - chr6_3:7214280-7214299 Msa0936470:intron 45.0%
ATGTCATCATTGAGCCTCTC+AGG - chr6_3:7215018-7215037 Msa0936470:intron 45.0%
TGGACAAGGACAGTGAGATT+AGG - chr6_3:7215217-7215236 Msa0936470:CDS 45.0%
GGACAAGGACAGTGAGATTA+GGG - chr6_3:7215218-7215237 Msa0936470:CDS 45.0%
AAGAGGTTTATGGACTCCTG+AGG - chr6_3:7213016-7213035 Msa0936470:CDS 45.0%
GCAGTATAATGCGACCAATG+TGG - chr6_3:7213160-7213179 Msa0936470:CDS 45.0%
ATAGGTGTGGTAAGAGTTGC+AGG - chr6_3:7213414-7213433 Msa0936470:CDS 45.0%
GCTTCCTATAGCTCCATGAA+GGG + chr6_3:7213516-7213535 None:intergenic 45.0%
TGCTTCCTATAGCTCCATGA+AGG + chr6_3:7213517-7213536 None:intergenic 45.0%
TTCATGGAGCTATAGGAAGC+AGG - chr6_3:7213516-7213535 Msa0936470:CDS 45.0%
ATAAGAGCGACTAAGTAGGG+CGG - chr6_3:7214280-7214299 Msa0936470:intron 45.0%
ATGTCATCATTGAGCCTCTC+AGG - chr6_3:7215018-7215037 Msa0936470:intron 45.0%
TGGACAAGGACAGTGAGATT+AGG - chr6_3:7215217-7215236 Msa0936470:CDS 45.0%
GGACAAGGACAGTGAGATTA+GGG - chr6_3:7215218-7215237 Msa0936470:CDS 45.0%
TAAGAGCGACTAAGTAGGGC+GGG - chr6_3:7214281-7214300 Msa0936470:intron 50.0%
TAAGAGCGACTAAGTAGGGC+GGG - chr6_3:7214281-7214300 Msa0936470:intron 50.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_3:7213234-7213253 None:intergenic 55.0%
GCAGTCTGCAACCGCAAATG+TGG + chr6_3:7213234-7213253 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 7212978 7215281 7212978 ID=Msa0936470;Name=Msa0936470
chr6_3 mRNA 7212978 7215281 7212978 ID=Msa0936470-mRNA-1;Parent=Msa0936470;Name=Msa0936470-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|344
chr6_3 exon 7215149 7215281 7215149 ID=Msa0936470-mRNA-1:exon:2360;Parent=Msa0936470-mRNA-1
chr6_3 exon 7214722 7214851 7214722 ID=Msa0936470-mRNA-1:exon:2359;Parent=Msa0936470-mRNA-1
chr6_3 exon 7212978 7213749 7212978 ID=Msa0936470-mRNA-1:exon:2358;Parent=Msa0936470-mRNA-1
chr6_3 CDS 7215149 7215281 7215149 ID=Msa0936470-mRNA-1:cds;Parent=Msa0936470-mRNA-1
chr6_3 CDS 7214722 7214851 7214722 ID=Msa0936470-mRNA-1:cds;Parent=Msa0936470-mRNA-1
chr6_3 CDS 7212978 7213749 7212978 ID=Msa0936470-mRNA-1:cds;Parent=Msa0936470-mRNA-1
Gene Sequence

>Msa0936470

ATGGGAAGGCCTCCTTGTTGTGATAAAACCAATGTGAAAAGAGGTTTATGGACTCCTGAGGAAGATGCTAAAATACTTGCTTATGTAGCCAATCATGGAATTGGAAATTGGACAACTGTTCCAAAGAAAGCAGGGTTGAATAGGTGTGGTAAGAGTTGCAGGCTAAGATATACAAATTATCTAAGACCTGATCTCAAGCATGATAGTTTTACACCTGAGGAAGAAGAGCTGATTATTACCCTTCATGGAGCTATAGGAAGCAGATGGTCTTGTATTGCAAAAAGACTACCTGGAAGAACAGACAATGATGTCAAGAATTATTGGAACACAAAACTAAGAAAGAAGCTTATGAAAATGGGAATTGATCCAGTAACTCATAAGCCAGTTTCACAAGTGATTTCTGACTTAGGAAACATTAGTAGCCTCACAACAACATCAAACTCTCAAAACCAAATGAATTTTGTCAATAACACCCCAATATTGGAACACACAAAAGATGAACAAGTTCAACCAATGCAAAATCAAGTTCAATATCACCAATTCACAAACCAAGAGAATTTCCAACAACATGTCTTAAGTGAAGTTGCATCTTCAAGTTCATCTTCATCTTCTTCTAATCTCACTAGGCTAAGCTCGCCGATTTCGTACTCTTGCAACACTTCACAAGCTCAAATTAACTCTAACTTTGAATGGAGTGATTTTCTTCACAATGATGAGCCTTTAGTGTGGACAGAAATTCAACAGATTCAACAATGTGACATACAAAGGGTAATGTCATCATTGAGCCTCTCAGGTATAATGCAAAGTGAAGGTGAAATTTCCAATAATTTCAATAGTAATGGAGATGATAAACAAGGTGGTTCAAGTGAAGGTTTTGAGGATGTTGCTTGTGATGCAAGTAAAGAATATCAAGGTGATAAGAAGTGTGAAGGGAATTCATTTTCAGGGAATTCATTTGTGGATGGTATTTTGGACAAGGACAGTGAGATTAGGGCAACCTTTCCAGAAATTTTGGATGCTTCTTTTGATTATTAA
Protein sequence

>Msa0936470

MGRPPCCDKTNVKRGLWTPEEDAKILAYVANHGIGNWTTVPKKAGLNRCGKSCRLRYTNYLRPDLKHDSFTPEEEELIITLHGAIGSRWSCIAKRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVISDLGNISSLTTTSNSQNQMNFVNNTPILEHTKDEQVQPMQNQVQYHQFTNQENFQQHVLSEVASSSSSSSSSNLTRLSSPISYSCNTSQAQINSNFEWSDFLHNDEPLVWTEIQQIQQCDIQRVMSSLSLSGIMQSEGEISNNFNSNGDDKQGGSSEGFEDVACDASKEYQGDKKCEGNSFSGNSFVDGILDKDSEIRATFPEILDASFDY*