AlfalfaGEDB | Msa0936850

M. sativa cultivar zhongmu-4 / Msa0936850

KEGG: K14400
GO: GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000026 GO:2000241 GO:2000243
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0936850	sp\|Q0WPF2\|PCFS4_ARATH	69.347	199	61	0	234	432	591	789	1.03e-96	310

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0936850	A0A2K3PQM1	64.118	510	89	12	15	433	250	756	0.0	603

TFs/TRs:

Gene ID	Type	Classification
Msa0936850	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0936850	MtrunA17_Chr6g0452881	65.497	513	80	10	15	433	304	813	0.0	596
Msa0936850	MtrunA17_Chr6g0452891	81.513	238	22	3	197	433	1	217	2.40e-135	387
Msa0936850	MtrunA17_Chr4g0037071	82.514	183	32	0	251	433	1	183	4.49e-100	298
Msa0936850	MtrunA17_Chr4g0037081	54.491	167	32	5	6	130	15	179	3.44e-43	150
Msa0936850	MtrunA17_Chr1g0179281	36.813	182	109	4	256	433	829	1008	2.57e-35	139
Msa0936850	MtrunA17_Chr7g0265781	34.314	204	127	5	234	433	815	1015	4.52e-34	135

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0936850	AT4G04885.1	69.347	199	61	0	234	432	591	789	1.05e-97	310
Msa0936850	AT1G66500.1	35.503	338	136	15	159	431	66	386	1.26e-46	166
Msa0936850	AT5G43620.1	34.957	349	149	16	131	431	62	380	1.88e-46	165
Msa0936850	AT2G36480.2	33.533	167	102	3	265	431	785	942	2.19e-25	109
Msa0936850	AT2G36480.1	33.533	167	102	3	265	431	785	942	2.19e-25	109

Find 119 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGACGAACCTTGAGAATATT+TGG	0.171658	6_3:-7777149	None:intergenic
CACATAATGCACATGTATTT+TGG	0.204278	6_3:-7777463	None:intergenic
GTGACTGCTGTGCTCATCTT+TGG	0.248435	6_3:-7777243	None:intergenic
AGATGAAGAGTTGGCTGTTC+TGG	0.282453	6_3:+7777430	Msa0936850:CDS
TAGGCATCAATTAGAGCTAT+TGG	0.294593	6_3:-7776256	None:intergenic
ATGCCTGTTGTTATTCCATT+AGG	0.320007	6_3:-7777560	None:intergenic
TGTCCACTGGTTGGCGAGTT+AGG	0.324685	6_3:-7776670	None:intergenic
AAGAGTTGTTTCCGATTCTT+TGG	0.325210	6_3:-7776776	None:intergenic
TCAAAAGTTGCTGGCGAAAC+TGG	0.326718	6_3:-7776454	None:intergenic
TCTGTAATCCGTGGCTTATA+TGG	0.327106	6_3:+7777176	Msa0936850:CDS
GATTCGAATGGATTCCTAAC+AGG	0.333615	6_3:-7776535	None:intergenic
TCAGCGTCAAGGGTGTTTCC+TGG	0.339799	6_3:+7776403	Msa0936850:CDS
TTATTCCATTAGGCGCATTA+AGG	0.358655	6_3:-7777550	None:intergenic
CGAAAAGACAAGAAACTTCA+TGG	0.371299	6_3:+7776287	Msa0936850:CDS
GATTCGGATGAGGTAGAATC+TGG	0.392316	6_3:-7776833	None:intergenic
CTGCATTTAGCATGAATAAC+GGG	0.394865	6_3:-7777602	None:intergenic
GGCTGTTGGCTTGACACATT+AGG	0.397611	6_3:-7776861	None:intergenic
ATGATTCCGACACCAGCAAC+TGG	0.398413	6_3:+7776346	Msa0936850:CDS
GGATTCTTCGATGGATATAT+AGG	0.398722	6_3:-7776514	None:intergenic
GGCATAGGAAGTGGCATAAC+AGG	0.399981	6_3:-7776750	None:intergenic
AAAGAAAGAAGATGAAGAGT+TGG	0.403383	6_3:+7777421	Msa0936850:CDS
ACGTGGAGCATGCACATTTA+CGG	0.404948	6_3:-7776488	None:intergenic
GTAGCGGGCTTCCCAGTTGC+TGG	0.407709	6_3:-7776358	None:intergenic
CCGAAGAGGAGGAGTTCAAT+TGG	0.408130	6_3:+7776317	Msa0936850:CDS
CCATGTTCATGCACAGGAAT+AGG	0.417748	6_3:-7776604	None:intergenic
GCTTAAAGGTGCCGAGGCAT+TGG	0.418088	6_3:+7777352	Msa0936850:CDS
TTGTTTCCGATTCTTTGGTC+TGG	0.419863	6_3:-7776771	None:intergenic
ATTTGTTGGTGTTTCTCTCC+TGG	0.439045	6_3:-7776149	None:intergenic
AGTGAGACGATGTGGCTTAA+AGG	0.439793	6_3:+7777338	Msa0936850:CDS
GTATACCTTAATGCGCCTAA+TGG	0.441302	6_3:+7777545	Msa0936850:CDS
CCAATTGAACTCCTCCTCTT+CGG	0.441961	6_3:-7776317	None:intergenic
GCTCATCTTTGGATTTGAAT+CGG	0.447487	6_3:-7777232	None:intergenic
CTTAAAGGTGCCGAGGCATT+GGG	0.453885	6_3:+7777353	Msa0936850:CDS
GCGAGTTAGGCAACTGATGC+AGG	0.458157	6_3:-7776657	None:intergenic
TTCCGACCTTTACTTCCAGC+TGG	0.468020	6_3:+7776798	Msa0936850:CDS
GCATTTGCTGCAATAGTAGC+GGG	0.472527	6_3:-7776373	None:intergenic
AAAACTGATGAAGAATTTGT+TGG	0.474608	6_3:-7776163	None:intergenic
CTTTGGTCTGGCATAGGAAG+TGG	0.476736	6_3:-7776759	None:intergenic
GCCAATTTAGTTACCTCCGC+AGG	0.478344	6_3:-7776954	None:intergenic
AAAGGAAGAAGATGCTTGCC+AGG	0.480340	6_3:+7776131	None:intergenic
GGCTTCCCAGTTGCTGGTGT+CGG	0.485684	6_3:-7776352	None:intergenic
GGCATAGACAGGTCGCAGTT+AGG	0.489584	6_3:+7777578	Msa0936850:CDS
GACACATTAGGACCAGGATT+CGG	0.491699	6_3:-7776849	None:intergenic
GCGCCTAATGGAATAACAAC+AGG	0.497466	6_3:+7777557	Msa0936850:CDS
ATTCTACCTCATCCGAATCC+TGG	0.497538	6_3:+7776837	Msa0936850:CDS
CCGATTCTTTGGTCTGGCAT+AGG	0.499828	6_3:-7776765	None:intergenic
GCATGGCCAGCTGGAAGTAA+AGG	0.501044	6_3:-7776804	None:intergenic
TGGGGTAGAGCATGGCCAGC+TGG	0.501385	6_3:-7776813	None:intergenic
CGAAGAGGAGGAGTTCAATT+GGG	0.502140	6_3:+7776318	Msa0936850:CDS
TTGGGAGTCAAGTCAGCTCC+AGG	0.502567	6_3:+7777371	Msa0936850:CDS
ACGGAGGAGTGGATGTATAG+AGG	0.502902	6_3:+7777518	Msa0936850:CDS
GGCCTCGTTTCAAAAGTTGC+TGG	0.503897	6_3:-7776463	None:intergenic
AGCTAATGAGATAACACCTT+GGG	0.504555	6_3:-7776922	None:intergenic
TTAGCATTTATTGATTCGAA+TGG	0.504936	6_3:-7776547	None:intergenic
CCACAAGTTGTGCACTGTCT+AGG	0.505428	6_3:-7777206	None:intergenic
TCACTGTAAAACTCCTCAAA+AGG	0.506831	6_3:-7777491	None:intergenic
ATCCATCGAAGAATCCTGTT+AGG	0.507185	6_3:+7776521	Msa0936850:CDS
ATAGCTCTAATTGATGCCTA+TGG	0.514260	6_3:+7776259	Msa0936850:CDS
TTCATCACAAAATCTTCAGA+CGG	0.526226	6_3:-7777638	None:intergenic
AGCACAGCAGTCACATGGAT+TGG	0.529243	6_3:+7777252	Msa0936850:CDS
CAAAATACATGTGCATTATG+TGG	0.529245	6_3:+7777464	Msa0936850:CDS
CCTAGACAGTGCACAACTTG+TGG	0.539415	6_3:+7777206	Msa0936850:CDS
GGCGGTGTTTGTCCACTGGT+TGG	0.543540	6_3:-7776679	None:intergenic
TCATCACAAAATCTTCAGAC+GGG	0.546560	6_3:-7777637	None:intergenic
GAAAGGCGGTGTTTGTCCAC+TGG	0.548147	6_3:-7776683	None:intergenic
GAATAACAACAGGCATAGAC+AGG	0.548628	6_3:+7777567	Msa0936850:CDS
AAATTAGAATATCCGACAGT+TGG	0.551878	6_3:-7776882	None:intergenic
AGCAGAAACCCTCTCGCAAG+TGG	0.553269	6_3:+7777309	Msa0936850:CDS
AATATCCGACAGTTGGCTGT+TGG	0.554695	6_3:-7776875	None:intergenic
TCTGCATTTAGCATGAATAA+CGG	0.555648	6_3:-7777603	None:intergenic
CCTATGCCAGACCAAAGAAT+CGG	0.556854	6_3:+7776765	Msa0936850:CDS
ATTAGTTCACTCGTGGCCCA+AGG	0.558294	6_3:+7776906	Msa0936850:CDS
TTCCTAACAGGATTCTTCGA+TGG	0.563320	6_3:-7776523	None:intergenic
TGCATTTGCTGCAATAGTAG+CGG	0.574043	6_3:-7776374	None:intergenic
TGGCTTGACACATTAGGACC+AGG	0.576366	6_3:-7776855	None:intergenic
ATTCGGATGAGGTAGAATCT+GGG	0.576849	6_3:-7776832	None:intergenic
CTCACAAACCACTTGCGAGA+GGG	0.577171	6_3:-7777317	None:intergenic
TAATTTGATTAGTTCACTCG+TGG	0.577584	6_3:+7776899	Msa0936850:CDS
TTAGGACCAGGATTCGGATG+AGG	0.577777	6_3:-7776843	None:intergenic
GAATATTTGGATCAAACTCA+AGG	0.580223	6_3:-7777136	None:intergenic
AGATGAGCACAGCAGTCACA+TGG	0.587427	6_3:+7777247	Msa0936850:CDS
GTTTGATCCAAATATTCTCA+AGG	0.588305	6_3:+7777142	Msa0936850:CDS
TCGACACCATGTTCATGCAC+AGG	0.588454	6_3:-7776610	None:intergenic
CCTATTCCTGTGCATGAACA+TGG	0.596190	6_3:+7776604	Msa0936850:CDS
GAGTTCAGCTATCGCAGCAA+CGG	0.596554	6_3:+7776217	Msa0936850:CDS
GTAGAATCTGGGGTAGAGCA+TGG	0.600654	6_3:-7776821	None:intergenic
CATCTTTGGATTTGAATCGG+AGG	0.601375	6_3:-7777229	None:intergenic
CCAATTTAGTTACCTCCGCA+GGG	0.606122	6_3:-7776953	None:intergenic
TTGCCTAACTCGCCAACCAG+TGG	0.608662	6_3:+7776667	Msa0936850:CDS
AATACTACCACTGTGAGTCA+TGG	0.609522	6_3:+7776568	Msa0936850:CDS
TTCTTCGATGGATATATAGG+AGG	0.611513	6_3:-7776511	None:intergenic
AAAGTTGCTGGCGAAACTGG+TGG	0.614136	6_3:-7776451	None:intergenic
GAAAATCACCATATAAGCCA+CGG	0.623056	6_3:-7777184	None:intergenic
TGATTCCGACACCAGCAACT+GGG	0.627867	6_3:+7776347	Msa0936850:CDS
ATGGAAGAATACCGAAGAGG+AGG	0.631037	6_3:+7776306	Msa0936850:CDS
GATGGATATATAGGAGGACG+TGG	0.633038	6_3:-7776505	None:intergenic
ACTCACAAACCACTTGCGAG+AGG	0.633226	6_3:-7777318	None:intergenic
ACAGTGATGAAACGGAGGAG+TGG	0.635697	6_3:+7777507	Msa0936850:CDS
GGCCAGCTGGAAGTAAAGGT+CGG	0.639802	6_3:-7776800	None:intergenic
CGTCATAAATCTGTAATCCG+TGG	0.642310	6_3:+7777167	Msa0936850:CDS
TGACTTGACTCCCAATGCCT+CGG	0.643816	6_3:-7777363	None:intergenic
TCAAGCCAACAGCCAACTGT+CGG	0.643822	6_3:+7776870	Msa0936850:CDS
TAGCTAATGAGATAACACCT+TGG	0.648926	6_3:-7776923	None:intergenic
AGCTAATCAAGCCCCTGCGG+AGG	0.650230	6_3:+7776941	Msa0936850:CDS
TTCGGATGAGGTAGAATCTG+GGG	0.651800	6_3:-7776831	None:intergenic
TCAGTATTAGAATTGAGACC+AGG	0.658819	6_3:-7776421	None:intergenic
GTTGGCTGTTCTGGCCGACG+AGG	0.666914	6_3:+7777439	Msa0936850:CDS
TGCATTTAGCATGAATAACG+GGG	0.669690	6_3:-7777601	None:intergenic
GGAGCATGCACATTTACGGA+GGG	0.674855	6_3:-7776484	None:intergenic
TGGAGCATGCACATTTACGG+AGG	0.681918	6_3:-7776485	None:intergenic
TTCATGGAAGAATACCGAAG+AGG	0.683939	6_3:+7776303	Msa0936850:CDS
GAACATGGTGTCGAGAACAA+TGG	0.686510	6_3:+7776619	Msa0936850:CDS
CAATTTAGTTACCTCCGCAG+GGG	0.688755	6_3:-7776952	None:intergenic
ATTAGCTAATCAAGCCCCTG+CGG	0.693399	6_3:+7776938	Msa0936850:CDS
GATGTGGCTTAAAGGTGCCG+AGG	0.696373	6_3:+7777346	Msa0936850:CDS
TTGCTGGCGAAACTGGTGGA+TGG	0.703445	6_3:-7776447	None:intergenic
GGTTTGTGAGTGAGACGATG+TGG	0.711325	6_3:+7777330	Msa0936850:CDS
GCAGTCAAAGAAAACGAATG+CGG	0.728888	6_3:+7778068	Msa0936850:three_prime_UTR
AATTAGACCATGACTCACAG+TGG	0.751691	6_3:-7776575	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACATAATATAATAACAAAAT+TGG	-	chr6_3:7777099-7777118	None:intergenic	10.0%
!!	ACATAATATAATAACAAAAT+TGG	-	chr6_3:7777099-7777118	None:intergenic	10.0%
!!	TGTTATTATATTATGTTTGT+AGG	+	chr6_3:7777103-7777122	Msa0936850:intron	15.0%
!!	TGTTATTATATTATGTTTGT+AGG	+	chr6_3:7777103-7777122	Msa0936850:intron	15.0%
!!	GTGATATAAAAATTGAACTA+AGG	-	chr6_3:7777046-7777065	None:intergenic	20.0%
!!!	TTATGTTTGTAGGATTTTAT+TGG	+	chr6_3:7777113-7777132	Msa0936850:intron	20.0%
!!	ATTTGTCCATATTATTCTTT+CGG	+	chr6_3:7777704-7777723	Msa0936850:intron	20.0%
!!	GTGATATAAAAATTGAACTA+AGG	-	chr6_3:7777046-7777065	None:intergenic	20.0%
!!!	TTATGTTTGTAGGATTTTAT+TGG	+	chr6_3:7777113-7777132	Msa0936850:intron	20.0%
!!	ATTTGTCCATATTATTCTTT+CGG	+	chr6_3:7777704-7777723	Msa0936850:intron	20.0%
!	AAAACTGATGAAGAATTTGT+TGG	-	chr6_3:7776166-7776185	None:intergenic	25.0%
!!!	TTAGCATTTATTGATTCGAA+TGG	-	chr6_3:7776550-7776569	None:intergenic	25.0%
!	ATGTGCAATTTACGATATAA+TGG	-	chr6_3:7777756-7777775	None:intergenic	25.0%
!!	ATATCGTAAATTGCACATTT+TGG	+	chr6_3:7777758-7777777	Msa0936850:intron	25.0%
!!!	AAAGATGACGGAAAAAAAAT+AGG	-	chr6_3:7777804-7777823	None:intergenic	25.0%
!	AAACATGACATAAAAGATGA+CGG	-	chr6_3:7777816-7777835	None:intergenic	25.0%
!!	TTTATGTCATGTTTTACATG+AGG	+	chr6_3:7777822-7777841	Msa0936850:intron	25.0%
!!!	GTGATGTTATTATTTTCAAG+TGG	+	chr6_3:7777961-7777980	Msa0936850:intron	25.0%
!	AAAACTGATGAAGAATTTGT+TGG	-	chr6_3:7776166-7776185	None:intergenic	25.0%
!!!	TTAGCATTTATTGATTCGAA+TGG	-	chr6_3:7776550-7776569	None:intergenic	25.0%
!	ATGTGCAATTTACGATATAA+TGG	-	chr6_3:7777756-7777775	None:intergenic	25.0%
!!	ATATCGTAAATTGCACATTT+TGG	+	chr6_3:7777758-7777777	Msa0936850:intron	25.0%
!!!	AAAGATGACGGAAAAAAAAT+AGG	-	chr6_3:7777804-7777823	None:intergenic	25.0%
!	AAACATGACATAAAAGATGA+CGG	-	chr6_3:7777816-7777835	None:intergenic	25.0%
!!	TTTATGTCATGTTTTACATG+AGG	+	chr6_3:7777822-7777841	Msa0936850:intron	25.0%
!!!	GTGATGTTATTATTTTCAAG+TGG	+	chr6_3:7777961-7777980	Msa0936850:intron	25.0%
!!	TCATCAAAACATCTTTTTCG+CGG	-	chr6_3:7776199-7776218	None:intergenic	30.0%
	AAATTAGAATATCCGACAGT+TGG	-	chr6_3:7776885-7776904	None:intergenic	30.0%
!	TAATTTGATTAGTTCACTCG+TGG	+	chr6_3:7776899-7776918	Msa0936850:CDS	30.0%
!	CGCAATTAAACAATAATGGA+AGG	-	chr6_3:7777074-7777093	None:intergenic	30.0%
	GGTACGCAATTAAACAATAA+TGG	-	chr6_3:7777078-7777097	None:intergenic	30.0%
	GAATATTTGGATCAAACTCA+AGG	-	chr6_3:7777139-7777158	None:intergenic	30.0%
	GTTTGATCCAAATATTCTCA+AGG	+	chr6_3:7777142-7777161	Msa0936850:CDS	30.0%
!	ATCTTCTTTCTTTTCTTCAG+TGG	-	chr6_3:7777414-7777433	None:intergenic	30.0%
	AAAGAAAGAAGATGAAGAGT+TGG	+	chr6_3:7777421-7777440	Msa0936850:CDS	30.0%
!	CACATAATGCACATGTATTT+TGG	-	chr6_3:7777466-7777485	None:intergenic	30.0%
	CAAAATACATGTGCATTATG+TGG	+	chr6_3:7777464-7777483	Msa0936850:CDS	30.0%
	TCTGCATTTAGCATGAATAA+CGG	-	chr6_3:7777606-7777625	None:intergenic	30.0%
	TTCATCACAAAATCTTCAGA+CGG	-	chr6_3:7777641-7777660	None:intergenic	30.0%
!	AGATTTTGTGATGAAAGAAG+AGG	+	chr6_3:7777646-7777665	Msa0936850:three_prime_UTR	30.0%
	AAGTCACCGAAAGAATAATA+TGG	-	chr6_3:7777713-7777732	None:intergenic	30.0%
!	TGTTTTACATGAGGATATCA+TGG	+	chr6_3:7777831-7777850	Msa0936850:intron	30.0%
!!	TCATCAAAACATCTTTTTCG+CGG	-	chr6_3:7776199-7776218	None:intergenic	30.0%
	AAATTAGAATATCCGACAGT+TGG	-	chr6_3:7776885-7776904	None:intergenic	30.0%
!	TAATTTGATTAGTTCACTCG+TGG	+	chr6_3:7776899-7776918	Msa0936850:CDS	30.0%
!	CGCAATTAAACAATAATGGA+AGG	-	chr6_3:7777074-7777093	None:intergenic	30.0%
	GGTACGCAATTAAACAATAA+TGG	-	chr6_3:7777078-7777097	None:intergenic	30.0%
	GAATATTTGGATCAAACTCA+AGG	-	chr6_3:7777139-7777158	None:intergenic	30.0%
	GTTTGATCCAAATATTCTCA+AGG	+	chr6_3:7777142-7777161	Msa0936850:CDS	30.0%
!	ATCTTCTTTCTTTTCTTCAG+TGG	-	chr6_3:7777414-7777433	None:intergenic	30.0%
	AAAGAAAGAAGATGAAGAGT+TGG	+	chr6_3:7777421-7777440	Msa0936850:CDS	30.0%
!	CACATAATGCACATGTATTT+TGG	-	chr6_3:7777466-7777485	None:intergenic	30.0%
	CAAAATACATGTGCATTATG+TGG	+	chr6_3:7777464-7777483	Msa0936850:CDS	30.0%
	TCTGCATTTAGCATGAATAA+CGG	-	chr6_3:7777606-7777625	None:intergenic	30.0%
	TTCATCACAAAATCTTCAGA+CGG	-	chr6_3:7777641-7777660	None:intergenic	30.0%
!	AGATTTTGTGATGAAAGAAG+AGG	+	chr6_3:7777646-7777665	Msa0936850:three_prime_UTR	30.0%
	AAGTCACCGAAAGAATAATA+TGG	-	chr6_3:7777713-7777732	None:intergenic	30.0%
!	TGTTTTACATGAGGATATCA+TGG	+	chr6_3:7777831-7777850	Msa0936850:intron	30.0%
	TAGGCATCAATTAGAGCTAT+TGG	-	chr6_3:7776259-7776278	None:intergenic	35.0%
!!	ATAGCTCTAATTGATGCCTA+TGG	+	chr6_3:7776259-7776278	Msa0936850:CDS	35.0%
	CGAAAAGACAAGAAACTTCA+TGG	+	chr6_3:7776287-7776306	Msa0936850:CDS	35.0%
	TCAGTATTAGAATTGAGACC+AGG	-	chr6_3:7776424-7776443	None:intergenic	35.0%
	TTCTTCGATGGATATATAGG+AGG	-	chr6_3:7776514-7776533	None:intergenic	35.0%
	GGATTCTTCGATGGATATAT+AGG	-	chr6_3:7776517-7776536	None:intergenic	35.0%
	TGAGATGGAAAAAACTGGAA+AGG	-	chr6_3:7776703-7776722	None:intergenic	35.0%
!!	GATTCTGAGATGGAAAAAAC+TGG	-	chr6_3:7776708-7776727	None:intergenic	35.0%
!	AAGAGTTGTTTCCGATTCTT+TGG	-	chr6_3:7776779-7776798	None:intergenic	35.0%
	AGCTAATGAGATAACACCTT+GGG	-	chr6_3:7776925-7776944	None:intergenic	35.0%
	TAGCTAATGAGATAACACCT+TGG	-	chr6_3:7776926-7776945	None:intergenic	35.0%
	TGACGAACCTTGAGAATATT+TGG	-	chr6_3:7777152-7777171	None:intergenic	35.0%
	GAAAATCACCATATAAGCCA+CGG	-	chr6_3:7777187-7777206	None:intergenic	35.0%
	GCTCATCTTTGGATTTGAAT+CGG	-	chr6_3:7777235-7777254	None:intergenic	35.0%
!	TTTCTTTTCTTCAGTGGTCT+CGG	-	chr6_3:7777408-7777427	None:intergenic	35.0%
!	ATTATGTGGAGAACCTTTTG+AGG	+	chr6_3:7777478-7777497	Msa0936850:CDS	35.0%
	TCACTGTAAAACTCCTCAAA+AGG	-	chr6_3:7777494-7777513	None:intergenic	35.0%
!	GGAGTTTTACAGTGATGAAA+CGG	+	chr6_3:7777499-7777518	Msa0936850:CDS	35.0%
	TTATTCCATTAGGCGCATTA+AGG	-	chr6_3:7777553-7777572	None:intergenic	35.0%
!	ATGCCTGTTGTTATTCCATT+AGG	-	chr6_3:7777563-7777582	None:intergenic	35.0%
	TGCATTTAGCATGAATAACG+GGG	-	chr6_3:7777604-7777623	None:intergenic	35.0%
	CTGCATTTAGCATGAATAAC+GGG	-	chr6_3:7777605-7777624	None:intergenic	35.0%
	TCATCACAAAATCTTCAGAC+GGG	-	chr6_3:7777640-7777659	None:intergenic	35.0%
!	TTGTTTTCCTCTTTGTATGC+AGG	+	chr6_3:7778030-7778049	Msa0936850:intron	35.0%
!	TGTTTTCCTCTTTGTATGCA+GGG	+	chr6_3:7778031-7778050	Msa0936850:intron	35.0%
	TAGGCATCAATTAGAGCTAT+TGG	-	chr6_3:7776259-7776278	None:intergenic	35.0%
!!	ATAGCTCTAATTGATGCCTA+TGG	+	chr6_3:7776259-7776278	Msa0936850:CDS	35.0%
	CGAAAAGACAAGAAACTTCA+TGG	+	chr6_3:7776287-7776306	Msa0936850:CDS	35.0%
	TCAGTATTAGAATTGAGACC+AGG	-	chr6_3:7776424-7776443	None:intergenic	35.0%
	TTCTTCGATGGATATATAGG+AGG	-	chr6_3:7776514-7776533	None:intergenic	35.0%
	GGATTCTTCGATGGATATAT+AGG	-	chr6_3:7776517-7776536	None:intergenic	35.0%
	TGAGATGGAAAAAACTGGAA+AGG	-	chr6_3:7776703-7776722	None:intergenic	35.0%
!!	GATTCTGAGATGGAAAAAAC+TGG	-	chr6_3:7776708-7776727	None:intergenic	35.0%
!	AAGAGTTGTTTCCGATTCTT+TGG	-	chr6_3:7776779-7776798	None:intergenic	35.0%
	AGCTAATGAGATAACACCTT+GGG	-	chr6_3:7776925-7776944	None:intergenic	35.0%
	TAGCTAATGAGATAACACCT+TGG	-	chr6_3:7776926-7776945	None:intergenic	35.0%
	TGACGAACCTTGAGAATATT+TGG	-	chr6_3:7777152-7777171	None:intergenic	35.0%
	GAAAATCACCATATAAGCCA+CGG	-	chr6_3:7777187-7777206	None:intergenic	35.0%
	GCTCATCTTTGGATTTGAAT+CGG	-	chr6_3:7777235-7777254	None:intergenic	35.0%
!	TTTCTTTTCTTCAGTGGTCT+CGG	-	chr6_3:7777408-7777427	None:intergenic	35.0%
!	ATTATGTGGAGAACCTTTTG+AGG	+	chr6_3:7777478-7777497	Msa0936850:CDS	35.0%
	TCACTGTAAAACTCCTCAAA+AGG	-	chr6_3:7777494-7777513	None:intergenic	35.0%
!	GGAGTTTTACAGTGATGAAA+CGG	+	chr6_3:7777499-7777518	Msa0936850:CDS	35.0%
	TTATTCCATTAGGCGCATTA+AGG	-	chr6_3:7777553-7777572	None:intergenic	35.0%
!	ATGCCTGTTGTTATTCCATT+AGG	-	chr6_3:7777563-7777582	None:intergenic	35.0%
	TGCATTTAGCATGAATAACG+GGG	-	chr6_3:7777604-7777623	None:intergenic	35.0%
	CTGCATTTAGCATGAATAAC+GGG	-	chr6_3:7777605-7777624	None:intergenic	35.0%
	TCATCACAAAATCTTCAGAC+GGG	-	chr6_3:7777640-7777659	None:intergenic	35.0%
!	TTGTTTTCCTCTTTGTATGC+AGG	+	chr6_3:7778030-7778049	Msa0936850:intron	35.0%
!	TGTTTTCCTCTTTGTATGCA+GGG	+	chr6_3:7778031-7778050	Msa0936850:intron	35.0%
!	ATTTGTTGGTGTTTCTCTCC+TGG	-	chr6_3:7776152-7776171	None:intergenic	40.0%
!!	AGAGCTATTGGATTTTGACG+AGG	-	chr6_3:7776247-7776266	None:intergenic	40.0%
!	TTGTCTTTTCGCACTACCAT+AGG	-	chr6_3:7776278-7776297	None:intergenic	40.0%
	TTCATGGAAGAATACCGAAG+AGG	+	chr6_3:7776303-7776322	Msa0936850:CDS	40.0%
!	TGCATTTGCTGCAATAGTAG+CGG	-	chr6_3:7776377-7776396	None:intergenic	40.0%
!!!	ATGCAACTTTTTCAGCGTCA+AGG	+	chr6_3:7776392-7776411	Msa0936850:CDS	40.0%
!!!	TGCAACTTTTTCAGCGTCAA+GGG	+	chr6_3:7776393-7776412	Msa0936850:CDS	40.0%
	ATCCATCGAAGAATCCTGTT+AGG	+	chr6_3:7776521-7776540	Msa0936850:CDS	40.0%
	TTCCTAACAGGATTCTTCGA+TGG	-	chr6_3:7776526-7776545	None:intergenic	40.0%
!	GATTCGAATGGATTCCTAAC+AGG	-	chr6_3:7776538-7776557	None:intergenic	40.0%
	AATACTACCACTGTGAGTCA+TGG	+	chr6_3:7776568-7776587	Msa0936850:CDS	40.0%
	AATTAGACCATGACTCACAG+TGG	-	chr6_3:7776578-7776597	None:intergenic	40.0%
	GATGGAAAAAACTGGAAAGG+CGG	-	chr6_3:7776700-7776719	None:intergenic	40.0%
	TTGTTTCCGATTCTTTGGTC+TGG	-	chr6_3:7776774-7776793	None:intergenic	40.0%
	ATTCGGATGAGGTAGAATCT+GGG	-	chr6_3:7776835-7776854	None:intergenic	40.0%
	TTGATTTAGTTACCTCCGCA+GGG	-	chr6_3:7777022-7777041	None:intergenic	40.0%
!	ATTGATTTAGTTACCTCCGC+AGG	-	chr6_3:7777023-7777042	None:intergenic	40.0%
	CGTCATAAATCTGTAATCCG+TGG	+	chr6_3:7777167-7777186	Msa0936850:CDS	40.0%
	TCTGTAATCCGTGGCTTATA+TGG	+	chr6_3:7777176-7777195	Msa0936850:CDS	40.0%
	CATCTTTGGATTTGAATCGG+AGG	-	chr6_3:7777232-7777251	None:intergenic	40.0%
!!!	ACATGTATTTTGGTCCTCGT+CGG	-	chr6_3:7777456-7777475	None:intergenic	40.0%
!	GTTTTACAGTGATGAAACGG+AGG	+	chr6_3:7777502-7777521	Msa0936850:CDS	40.0%
	GTATACCTTAATGCGCCTAA+TGG	+	chr6_3:7777545-7777564	Msa0936850:CDS	40.0%
	GAATAACAACAGGCATAGAC+AGG	+	chr6_3:7777567-7777586	Msa0936850:CDS	40.0%
	TCACAATAGACTGCAACACT+AGG	+	chr6_3:7777855-7777874	Msa0936850:intron	40.0%
	TGCTTGAAGAAGATCAGAAC+AGG	-	chr6_3:7777994-7778013	None:intergenic	40.0%
	GCAGTCAAAGAAAACGAATG+CGG	+	chr6_3:7778068-7778087	Msa0936850:three_prime_UTR	40.0%
	CAGTCAAAGAAAACGAATGC+GGG	+	chr6_3:7778069-7778088	Msa0936850:three_prime_UTR	40.0%
!	ATTTGTTGGTGTTTCTCTCC+TGG	-	chr6_3:7776152-7776171	None:intergenic	40.0%
!!	AGAGCTATTGGATTTTGACG+AGG	-	chr6_3:7776247-7776266	None:intergenic	40.0%
!	TTGTCTTTTCGCACTACCAT+AGG	-	chr6_3:7776278-7776297	None:intergenic	40.0%
	TTCATGGAAGAATACCGAAG+AGG	+	chr6_3:7776303-7776322	Msa0936850:CDS	40.0%
!	TGCATTTGCTGCAATAGTAG+CGG	-	chr6_3:7776377-7776396	None:intergenic	40.0%
!!!	ATGCAACTTTTTCAGCGTCA+AGG	+	chr6_3:7776392-7776411	Msa0936850:CDS	40.0%
!!!	TGCAACTTTTTCAGCGTCAA+GGG	+	chr6_3:7776393-7776412	Msa0936850:CDS	40.0%
	ATCCATCGAAGAATCCTGTT+AGG	+	chr6_3:7776521-7776540	Msa0936850:CDS	40.0%
	TTCCTAACAGGATTCTTCGA+TGG	-	chr6_3:7776526-7776545	None:intergenic	40.0%
!	GATTCGAATGGATTCCTAAC+AGG	-	chr6_3:7776538-7776557	None:intergenic	40.0%
	AATACTACCACTGTGAGTCA+TGG	+	chr6_3:7776568-7776587	Msa0936850:CDS	40.0%
	AATTAGACCATGACTCACAG+TGG	-	chr6_3:7776578-7776597	None:intergenic	40.0%
	GATGGAAAAAACTGGAAAGG+CGG	-	chr6_3:7776700-7776719	None:intergenic	40.0%
	TTGTTTCCGATTCTTTGGTC+TGG	-	chr6_3:7776774-7776793	None:intergenic	40.0%
	ATTCGGATGAGGTAGAATCT+GGG	-	chr6_3:7776835-7776854	None:intergenic	40.0%
	TTGATTTAGTTACCTCCGCA+GGG	-	chr6_3:7777022-7777041	None:intergenic	40.0%
!	ATTGATTTAGTTACCTCCGC+AGG	-	chr6_3:7777023-7777042	None:intergenic	40.0%
	CGTCATAAATCTGTAATCCG+TGG	+	chr6_3:7777167-7777186	Msa0936850:CDS	40.0%
	TCTGTAATCCGTGGCTTATA+TGG	+	chr6_3:7777176-7777195	Msa0936850:CDS	40.0%
	CATCTTTGGATTTGAATCGG+AGG	-	chr6_3:7777232-7777251	None:intergenic	40.0%
!!!	ACATGTATTTTGGTCCTCGT+CGG	-	chr6_3:7777456-7777475	None:intergenic	40.0%
!	GTTTTACAGTGATGAAACGG+AGG	+	chr6_3:7777502-7777521	Msa0936850:CDS	40.0%
	GTATACCTTAATGCGCCTAA+TGG	+	chr6_3:7777545-7777564	Msa0936850:CDS	40.0%
	GAATAACAACAGGCATAGAC+AGG	+	chr6_3:7777567-7777586	Msa0936850:CDS	40.0%
	TCACAATAGACTGCAACACT+AGG	+	chr6_3:7777855-7777874	Msa0936850:intron	40.0%
	TGCTTGAAGAAGATCAGAAC+AGG	-	chr6_3:7777994-7778013	None:intergenic	40.0%
	ATGGAAGAATACCGAAGAGG+AGG	+	chr6_3:7776306-7776325	Msa0936850:CDS	45.0%
	CCAATTGAACTCCTCCTCTT+CGG	-	chr6_3:7776320-7776339	None:intergenic	45.0%
	CGAAGAGGAGGAGTTCAATT+GGG	+	chr6_3:7776318-7776337	Msa0936850:CDS	45.0%
!	GCATTTGCTGCAATAGTAGC+GGG	-	chr6_3:7776376-7776395	None:intergenic	45.0%
	TCAAAAGTTGCTGGCGAAAC+TGG	-	chr6_3:7776457-7776476	None:intergenic	45.0%
	ACGTGGAGCATGCACATTTA+CGG	-	chr6_3:7776491-7776510	None:intergenic	45.0%
	GATGGATATATAGGAGGACG+TGG	-	chr6_3:7776508-7776527	None:intergenic	45.0%
	CCATGTTCATGCACAGGAAT+AGG	-	chr6_3:7776607-7776626	None:intergenic	45.0%
	CCTATTCCTGTGCATGAACA+TGG	+	chr6_3:7776604-7776623	Msa0936850:CDS	45.0%
!	GAACATGGTGTCGAGAACAA+TGG	+	chr6_3:7776619-7776638	Msa0936850:CDS	45.0%
	CCTATGCCAGACCAAAGAAT+CGG	+	chr6_3:7776765-7776784	Msa0936850:CDS	45.0%
	TTCGGATGAGGTAGAATCTG+GGG	-	chr6_3:7776834-7776853	None:intergenic	45.0%
	GATTCGGATGAGGTAGAATC+TGG	-	chr6_3:7776836-7776855	None:intergenic	45.0%
	ATTCTACCTCATCCGAATCC+TGG	+	chr6_3:7776837-7776856	Msa0936850:CDS	45.0%
	GACACATTAGGACCAGGATT+CGG	-	chr6_3:7776852-7776871	None:intergenic	45.0%
	AATATCCGACAGTTGGCTGT+TGG	-	chr6_3:7776878-7776897	None:intergenic	45.0%
	ATTAGCTAATCAAGCCCCTG+CGG	+	chr6_3:7776938-7776957	Msa0936850:CDS	45.0%
	CAATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7776955-7776974	None:intergenic	45.0%
	CCAATTTAGTTACCTCCGCA+GGG	-	chr6_3:7776956-7776975	None:intergenic	45.0%
	ATTGGCTAATCAAACCCCTG+CGG	+	chr6_3:7776971-7776990	Msa0936850:intron	45.0%
	TGATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7777021-7777040	None:intergenic	45.0%
	AGTGAGACGATGTGGCTTAA+AGG	+	chr6_3:7777338-7777357	Msa0936850:CDS	45.0%
!	TTTTCTTCAGTGGTCTCGGT+TGG	-	chr6_3:7777404-7777423	None:intergenic	45.0%
	AGATGAAGAGTTGGCTGTTC+TGG	+	chr6_3:7777430-7777449	Msa0936850:CDS	45.0%
	GCGCCTAATGGAATAACAAC+AGG	+	chr6_3:7777557-7777576	Msa0936850:CDS	45.0%
	TACGTTCCCTGCATACAAAG+AGG	-	chr6_3:7778040-7778059	None:intergenic	45.0%
	ATGGAAGAATACCGAAGAGG+AGG	+	chr6_3:7776306-7776325	Msa0936850:CDS	45.0%
	CCAATTGAACTCCTCCTCTT+CGG	-	chr6_3:7776320-7776339	None:intergenic	45.0%
	CGAAGAGGAGGAGTTCAATT+GGG	+	chr6_3:7776318-7776337	Msa0936850:CDS	45.0%
!	GCATTTGCTGCAATAGTAGC+GGG	-	chr6_3:7776376-7776395	None:intergenic	45.0%
	TCAAAAGTTGCTGGCGAAAC+TGG	-	chr6_3:7776457-7776476	None:intergenic	45.0%
	ACGTGGAGCATGCACATTTA+CGG	-	chr6_3:7776491-7776510	None:intergenic	45.0%
	GATGGATATATAGGAGGACG+TGG	-	chr6_3:7776508-7776527	None:intergenic	45.0%
	CCATGTTCATGCACAGGAAT+AGG	-	chr6_3:7776607-7776626	None:intergenic	45.0%
	CCTATTCCTGTGCATGAACA+TGG	+	chr6_3:7776604-7776623	Msa0936850:CDS	45.0%
!	GAACATGGTGTCGAGAACAA+TGG	+	chr6_3:7776619-7776638	Msa0936850:CDS	45.0%
	CCTATGCCAGACCAAAGAAT+CGG	+	chr6_3:7776765-7776784	Msa0936850:CDS	45.0%
	TTCGGATGAGGTAGAATCTG+GGG	-	chr6_3:7776834-7776853	None:intergenic	45.0%
	GATTCGGATGAGGTAGAATC+TGG	-	chr6_3:7776836-7776855	None:intergenic	45.0%
	ATTCTACCTCATCCGAATCC+TGG	+	chr6_3:7776837-7776856	Msa0936850:CDS	45.0%
	GACACATTAGGACCAGGATT+CGG	-	chr6_3:7776852-7776871	None:intergenic	45.0%
	AATATCCGACAGTTGGCTGT+TGG	-	chr6_3:7776878-7776897	None:intergenic	45.0%
	ATTAGCTAATCAAGCCCCTG+CGG	+	chr6_3:7776938-7776957	Msa0936850:CDS	45.0%
	CAATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7776955-7776974	None:intergenic	45.0%
	CCAATTTAGTTACCTCCGCA+GGG	-	chr6_3:7776956-7776975	None:intergenic	45.0%
	ATTGGCTAATCAAACCCCTG+CGG	+	chr6_3:7776971-7776990	Msa0936850:intron	45.0%
	TGATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7777021-7777040	None:intergenic	45.0%
	AGTGAGACGATGTGGCTTAA+AGG	+	chr6_3:7777338-7777357	Msa0936850:CDS	45.0%
!	TTTTCTTCAGTGGTCTCGGT+TGG	-	chr6_3:7777404-7777423	None:intergenic	45.0%
	AGATGAAGAGTTGGCTGTTC+TGG	+	chr6_3:7777430-7777449	Msa0936850:CDS	45.0%
	GCGCCTAATGGAATAACAAC+AGG	+	chr6_3:7777557-7777576	Msa0936850:CDS	45.0%
	TACGTTCCCTGCATACAAAG+AGG	-	chr6_3:7778040-7778059	None:intergenic	45.0%
	GAGTTCAGCTATCGCAGCAA+CGG	+	chr6_3:7776217-7776236	Msa0936850:CDS	50.0%
	CCGAAGAGGAGGAGTTCAAT+TGG	+	chr6_3:7776317-7776336	Msa0936850:CDS	50.0%
	ATGATTCCGACACCAGCAAC+TGG	+	chr6_3:7776346-7776365	Msa0936850:CDS	50.0%
	TGATTCCGACACCAGCAACT+GGG	+	chr6_3:7776347-7776366	Msa0936850:CDS	50.0%
	AAAGTTGCTGGCGAAACTGG+TGG	-	chr6_3:7776454-7776473	None:intergenic	50.0%
!!!	CGCCAGCAACTTTTGAAACG+AGG	+	chr6_3:7776461-7776480	Msa0936850:CDS	50.0%
	GGCCTCGTTTCAAAAGTTGC+TGG	-	chr6_3:7776466-7776485	None:intergenic	50.0%
	GGAGCATGCACATTTACGGA+GGG	-	chr6_3:7776487-7776506	None:intergenic	50.0%
	TGGAGCATGCACATTTACGG+AGG	-	chr6_3:7776488-7776507	None:intergenic	50.0%
	TCGACACCATGTTCATGCAC+AGG	-	chr6_3:7776613-7776632	None:intergenic	50.0%
	GGCATAGGAAGTGGCATAAC+AGG	-	chr6_3:7776753-7776772	None:intergenic	50.0%
	CTTTGGTCTGGCATAGGAAG+TGG	-	chr6_3:7776762-7776781	None:intergenic	50.0%
	CCGATTCTTTGGTCTGGCAT+AGG	-	chr6_3:7776768-7776787	None:intergenic	50.0%
	TTCCGACCTTTACTTCCAGC+TGG	+	chr6_3:7776798-7776817	Msa0936850:CDS	50.0%
!	GTAGAATCTGGGGTAGAGCA+TGG	-	chr6_3:7776824-7776843	None:intergenic	50.0%
	TTAGGACCAGGATTCGGATG+AGG	-	chr6_3:7776846-7776865	None:intergenic	50.0%
	TGGCTTGACACATTAGGACC+AGG	-	chr6_3:7776858-7776877	None:intergenic	50.0%
!!	GGCTGTTGGCTTGACACATT+AGG	-	chr6_3:7776864-7776883	None:intergenic	50.0%
	TCAAGCCAACAGCCAACTGT+CGG	+	chr6_3:7776870-7776889	Msa0936850:CDS	50.0%
	ATTAGTTCACTCGTGGCCCA+AGG	+	chr6_3:7776906-7776925	Msa0936850:CDS	50.0%
	CCCTGCGGAGGTAACTAAAT+TGG	+	chr6_3:7776953-7776972	Msa0936850:intron	50.0%
	GCCAATTTAGTTACCTCCGC+AGG	-	chr6_3:7776957-7776976	None:intergenic	50.0%
	CGATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7776988-7777007	None:intergenic	50.0%
	CCGATTTAGTTACCTCCGCA+GGG	-	chr6_3:7776989-7777008	None:intergenic	50.0%
	CCCTGCGGAGGTAACTAAAT+CGG	+	chr6_3:7776953-7776972	Msa0936850:intron	50.0%
	CCACAAGTTGTGCACTGTCT+AGG	-	chr6_3:7777209-7777228	None:intergenic	50.0%
	CCTAGACAGTGCACAACTTG+TGG	+	chr6_3:7777206-7777225	Msa0936850:CDS	50.0%
	GTGACTGCTGTGCTCATCTT+TGG	-	chr6_3:7777246-7777265	None:intergenic	50.0%
	AGATGAGCACAGCAGTCACA+TGG	+	chr6_3:7777247-7777266	Msa0936850:CDS	50.0%
	AGCACAGCAGTCACATGGAT+TGG	+	chr6_3:7777252-7777271	Msa0936850:CDS	50.0%
	CTCACAAACCACTTGCGAGA+GGG	-	chr6_3:7777320-7777339	None:intergenic	50.0%
	ACTCACAAACCACTTGCGAG+AGG	-	chr6_3:7777321-7777340	None:intergenic	50.0%
	GGTTTGTGAGTGAGACGATG+TGG	+	chr6_3:7777330-7777349	Msa0936850:CDS	50.0%
!!	CTTAAAGGTGCCGAGGCATT+GGG	+	chr6_3:7777353-7777372	Msa0936850:CDS	50.0%
	TGACTTGACTCCCAATGCCT+CGG	-	chr6_3:7777366-7777385	None:intergenic	50.0%
	GTCTCGGTTGGCAAAAAACC+TGG	-	chr6_3:7777392-7777411	None:intergenic	50.0%
	ACAGTGATGAAACGGAGGAG+TGG	+	chr6_3:7777507-7777526	Msa0936850:CDS	50.0%
	ACGGAGGAGTGGATGTATAG+AGG	+	chr6_3:7777518-7777537	Msa0936850:CDS	50.0%
	GAGTTCAGCTATCGCAGCAA+CGG	+	chr6_3:7776217-7776236	Msa0936850:CDS	50.0%
	CCGAAGAGGAGGAGTTCAAT+TGG	+	chr6_3:7776317-7776336	Msa0936850:CDS	50.0%
	ATGATTCCGACACCAGCAAC+TGG	+	chr6_3:7776346-7776365	Msa0936850:CDS	50.0%
	TGATTCCGACACCAGCAACT+GGG	+	chr6_3:7776347-7776366	Msa0936850:CDS	50.0%
	AAAGTTGCTGGCGAAACTGG+TGG	-	chr6_3:7776454-7776473	None:intergenic	50.0%
!!!	CGCCAGCAACTTTTGAAACG+AGG	+	chr6_3:7776461-7776480	Msa0936850:CDS	50.0%
	GGCCTCGTTTCAAAAGTTGC+TGG	-	chr6_3:7776466-7776485	None:intergenic	50.0%
	GGAGCATGCACATTTACGGA+GGG	-	chr6_3:7776487-7776506	None:intergenic	50.0%
	TGGAGCATGCACATTTACGG+AGG	-	chr6_3:7776488-7776507	None:intergenic	50.0%
	TCGACACCATGTTCATGCAC+AGG	-	chr6_3:7776613-7776632	None:intergenic	50.0%
	GGCATAGGAAGTGGCATAAC+AGG	-	chr6_3:7776753-7776772	None:intergenic	50.0%
	CTTTGGTCTGGCATAGGAAG+TGG	-	chr6_3:7776762-7776781	None:intergenic	50.0%
	CCGATTCTTTGGTCTGGCAT+AGG	-	chr6_3:7776768-7776787	None:intergenic	50.0%
	TTCCGACCTTTACTTCCAGC+TGG	+	chr6_3:7776798-7776817	Msa0936850:CDS	50.0%
!	GTAGAATCTGGGGTAGAGCA+TGG	-	chr6_3:7776824-7776843	None:intergenic	50.0%
	TTAGGACCAGGATTCGGATG+AGG	-	chr6_3:7776846-7776865	None:intergenic	50.0%
	TGGCTTGACACATTAGGACC+AGG	-	chr6_3:7776858-7776877	None:intergenic	50.0%
!!	GGCTGTTGGCTTGACACATT+AGG	-	chr6_3:7776864-7776883	None:intergenic	50.0%
	TCAAGCCAACAGCCAACTGT+CGG	+	chr6_3:7776870-7776889	Msa0936850:CDS	50.0%
	ATTAGTTCACTCGTGGCCCA+AGG	+	chr6_3:7776906-7776925	Msa0936850:CDS	50.0%
	CCCTGCGGAGGTAACTAAAT+TGG	+	chr6_3:7776953-7776972	Msa0936850:intron	50.0%
	GCCAATTTAGTTACCTCCGC+AGG	-	chr6_3:7776957-7776976	None:intergenic	50.0%
	CGATTTAGTTACCTCCGCAG+GGG	-	chr6_3:7776988-7777007	None:intergenic	50.0%
	CCGATTTAGTTACCTCCGCA+GGG	-	chr6_3:7776989-7777008	None:intergenic	50.0%
	CCCTGCGGAGGTAACTAAAT+CGG	+	chr6_3:7776953-7776972	Msa0936850:intron	50.0%
	CCACAAGTTGTGCACTGTCT+AGG	-	chr6_3:7777209-7777228	None:intergenic	50.0%
	CCTAGACAGTGCACAACTTG+TGG	+	chr6_3:7777206-7777225	Msa0936850:CDS	50.0%
	GTGACTGCTGTGCTCATCTT+TGG	-	chr6_3:7777246-7777265	None:intergenic	50.0%
	AGATGAGCACAGCAGTCACA+TGG	+	chr6_3:7777247-7777266	Msa0936850:CDS	50.0%
	AGCACAGCAGTCACATGGAT+TGG	+	chr6_3:7777252-7777271	Msa0936850:CDS	50.0%
	CTCACAAACCACTTGCGAGA+GGG	-	chr6_3:7777320-7777339	None:intergenic	50.0%
	ACTCACAAACCACTTGCGAG+AGG	-	chr6_3:7777321-7777340	None:intergenic	50.0%
	GGTTTGTGAGTGAGACGATG+TGG	+	chr6_3:7777330-7777349	Msa0936850:CDS	50.0%
!!	CTTAAAGGTGCCGAGGCATT+GGG	+	chr6_3:7777353-7777372	Msa0936850:CDS	50.0%
	TGACTTGACTCCCAATGCCT+CGG	-	chr6_3:7777366-7777385	None:intergenic	50.0%
	GTCTCGGTTGGCAAAAAACC+TGG	-	chr6_3:7777392-7777411	None:intergenic	50.0%
	ACAGTGATGAAACGGAGGAG+TGG	+	chr6_3:7777507-7777526	Msa0936850:CDS	50.0%
	ACGGAGGAGTGGATGTATAG+AGG	+	chr6_3:7777518-7777537	Msa0936850:CDS	50.0%
!!	TCAGCGTCAAGGGTGTTTCC+TGG	+	chr6_3:7776403-7776422	Msa0936850:CDS	55.0%
	TTGCTGGCGAAACTGGTGGA+TGG	-	chr6_3:7776450-7776469	None:intergenic	55.0%
	GCGAGTTAGGCAACTGATGC+AGG	-	chr6_3:7776660-7776679	None:intergenic	55.0%
	TTGCCTAACTCGCCAACCAG+TGG	+	chr6_3:7776667-7776686	Msa0936850:CDS	55.0%
!	TGTCCACTGGTTGGCGAGTT+AGG	-	chr6_3:7776673-7776692	None:intergenic	55.0%
	GAAAGGCGGTGTTTGTCCAC+TGG	-	chr6_3:7776686-7776705	None:intergenic	55.0%
!	GACGCTGCTGGATTCTGAGA+TGG	-	chr6_3:7776718-7776737	None:intergenic	55.0%
	GGCCAGCTGGAAGTAAAGGT+CGG	-	chr6_3:7776803-7776822	None:intergenic	55.0%
	GCATGGCCAGCTGGAAGTAA+AGG	-	chr6_3:7776807-7776826	None:intergenic	55.0%
!	GCCGATTTAGTTACCTCCGC+AGG	-	chr6_3:7776990-7777009	None:intergenic	55.0%
	ATCGGCTAATGAAGCCCCTG+CGG	+	chr6_3:7777004-7777023	Msa0936850:intron	55.0%
	AGCAGAAACCCTCTCGCAAG+TGG	+	chr6_3:7777309-7777328	Msa0936850:CDS	55.0%
!!	GATGTGGCTTAAAGGTGCCG+AGG	+	chr6_3:7777346-7777365	Msa0936850:CDS	55.0%
!!	GCTTAAAGGTGCCGAGGCAT+TGG	+	chr6_3:7777352-7777371	Msa0936850:CDS	55.0%
	TTGGGAGTCAAGTCAGCTCC+AGG	+	chr6_3:7777371-7777390	Msa0936850:CDS	55.0%
	GGCATAGACAGGTCGCAGTT+AGG	+	chr6_3:7777578-7777597	Msa0936850:CDS	55.0%
!!	TCAGCGTCAAGGGTGTTTCC+TGG	+	chr6_3:7776403-7776422	Msa0936850:CDS	55.0%
	TTGCTGGCGAAACTGGTGGA+TGG	-	chr6_3:7776450-7776469	None:intergenic	55.0%
	GCGAGTTAGGCAACTGATGC+AGG	-	chr6_3:7776660-7776679	None:intergenic	55.0%
	TTGCCTAACTCGCCAACCAG+TGG	+	chr6_3:7776667-7776686	Msa0936850:CDS	55.0%
!	TGTCCACTGGTTGGCGAGTT+AGG	-	chr6_3:7776673-7776692	None:intergenic	55.0%
	GAAAGGCGGTGTTTGTCCAC+TGG	-	chr6_3:7776686-7776705	None:intergenic	55.0%
!	GACGCTGCTGGATTCTGAGA+TGG	-	chr6_3:7776718-7776737	None:intergenic	55.0%
	GGCCAGCTGGAAGTAAAGGT+CGG	-	chr6_3:7776803-7776822	None:intergenic	55.0%
	GCATGGCCAGCTGGAAGTAA+AGG	-	chr6_3:7776807-7776826	None:intergenic	55.0%
!	GCCGATTTAGTTACCTCCGC+AGG	-	chr6_3:7776990-7777009	None:intergenic	55.0%
	ATCGGCTAATGAAGCCCCTG+CGG	+	chr6_3:7777004-7777023	Msa0936850:intron	55.0%
	AGCAGAAACCCTCTCGCAAG+TGG	+	chr6_3:7777309-7777328	Msa0936850:CDS	55.0%
!!	GATGTGGCTTAAAGGTGCCG+AGG	+	chr6_3:7777346-7777365	Msa0936850:CDS	55.0%
!!	GCTTAAAGGTGCCGAGGCAT+TGG	+	chr6_3:7777352-7777371	Msa0936850:CDS	55.0%
	TTGGGAGTCAAGTCAGCTCC+AGG	+	chr6_3:7777371-7777390	Msa0936850:CDS	55.0%
	GGCATAGACAGGTCGCAGTT+AGG	+	chr6_3:7777578-7777597	Msa0936850:CDS	55.0%
	GGCTTCCCAGTTGCTGGTGT+CGG	-	chr6_3:7776355-7776374	None:intergenic	60.0%
	GGCGGTGTTTGTCCACTGGT+TGG	-	chr6_3:7776682-7776701	None:intergenic	60.0%
	TCGTGCATTTGCGACGCTGC+TGG	-	chr6_3:7776730-7776749	None:intergenic	60.0%
	AGCTAATCAAGCCCCTGCGG+AGG	+	chr6_3:7776941-7776960	Msa0936850:CDS	60.0%
	GGCTAATCAAACCCCTGCGG+AGG	+	chr6_3:7776974-7776993	Msa0936850:intron	60.0%
	GGCTTCCCAGTTGCTGGTGT+CGG	-	chr6_3:7776355-7776374	None:intergenic	60.0%
	GGCGGTGTTTGTCCACTGGT+TGG	-	chr6_3:7776682-7776701	None:intergenic	60.0%
	TCGTGCATTTGCGACGCTGC+TGG	-	chr6_3:7776730-7776749	None:intergenic	60.0%
	AGCTAATCAAGCCCCTGCGG+AGG	+	chr6_3:7776941-7776960	Msa0936850:CDS	60.0%
	GGCTAATCAAACCCCTGCGG+AGG	+	chr6_3:7776974-7776993	Msa0936850:intron	60.0%
!!	GTAGCGGGCTTCCCAGTTGC+TGG	-	chr6_3:7776361-7776380	None:intergenic	65.0%
	TGGGGTAGAGCATGGCCAGC+TGG	-	chr6_3:7776816-7776835	None:intergenic	65.0%
	GGCTAATGAAGCCCCTGCGG+AGG	+	chr6_3:7777007-7777026	Msa0936850:intron	65.0%
	GTTGGCTGTTCTGGCCGACG+AGG	+	chr6_3:7777439-7777458	Msa0936850:CDS	65.0%
!!	GTAGCGGGCTTCCCAGTTGC+TGG	-	chr6_3:7776361-7776380	None:intergenic	65.0%
	TGGGGTAGAGCATGGCCAGC+TGG	-	chr6_3:7776816-7776835	None:intergenic	65.0%
	GGCTAATGAAGCCCCTGCGG+AGG	+	chr6_3:7777007-7777026	Msa0936850:intron	65.0%
	GTTGGCTGTTCTGGCCGACG+AGG	+	chr6_3:7777439-7777458	Msa0936850:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_3	gene	7776135	7778090	7776135	ID=Msa0936850;Name=Msa0936850
chr6_3	mRNA	7776135	7778090	7776135	ID=Msa0936850-mRNA-1;Parent=Msa0936850;Name=Msa0936850-mRNA-1;_AED=0.24;_eAED=0.24;_QI=7\|0.66\|0.5\|1\|0\|0\|4\|75\|433
chr6_3	exon	7776135	7776707	7776135	ID=Msa0936850-mRNA-1:exon:2556;Parent=Msa0936850-mRNA-1
chr6_3	exon	7776734	7776962	7776734	ID=Msa0936850-mRNA-1:exon:2557;Parent=Msa0936850-mRNA-1
chr6_3	exon	7777125	7777667	7777125	ID=Msa0936850-mRNA-1:exon:2558;Parent=Msa0936850-mRNA-1
chr6_3	exon	7778052	7778090	7778052	ID=Msa0936850-mRNA-1:exon:2559;Parent=Msa0936850-mRNA-1
chr6_3	five_prime_UTR	7776135	7776141	7776135	ID=Msa0936850-mRNA-1:five_prime_utr;Parent=Msa0936850-mRNA-1
chr6_3	CDS	7776142	7776707	7776142	ID=Msa0936850-mRNA-1:cds;Parent=Msa0936850-mRNA-1
chr6_3	CDS	7776734	7776962	7776734	ID=Msa0936850-mRNA-1:cds;Parent=Msa0936850-mRNA-1
chr6_3	CDS	7777125	7777631	7777125	ID=Msa0936850-mRNA-1:cds;Parent=Msa0936850-mRNA-1
chr6_3	three_prime_UTR	7777632	7777667	7777632	ID=Msa0936850-mRNA-1:three_prime_utr;Parent=Msa0936850-mRNA-1
chr6_3	three_prime_UTR	7778052	7778090	7778052	ID=Msa0936850-mRNA-1:three_prime_utr;Parent=Msa0936850-mRNA-1

Gene Sequence

>Msa0936850

ATGCTTGCCAGGAGAGAAACACCAACAAATTCTTCATCAGTTTTCTCACACTTTCCGCGAAAAAGATGTTTTGATGAGTTCAGCTATCGCAGCAACGGACAACCTCGTCAAAATCCAATAGCTCTAATTGATGCCTATGGTAGTGCGAAAAGACAAGAAACTTCATGGAAGAATACCGAAGAGGAGGAGTTCAATTGGGAAGATATGATTCCGACACCAGCAACTGGGAAGCCCGCTACTATTGCAGCAAATGCAACTTTTTCAGCGTCAAGGGTGTTTCCTGGTCTCAATTCTAATACTGAGTACCATCCACCAGTTTCGCCAGCAACTTTTGAAACGAGGCCCTCCGTAAATGTGCATGCTCCACGTCCTCCTATATATCCATCGAAGAATCCTGTTAGGAATCCATTCGAATCAATAAATGCTAATACTACCACTGTGAGTCATGGTCTAATTAATAGACCTATTCCTGTGCATGAACATGGTGTCGAGAACAATGGTATCAGTAAAAGAAACCTGCATCAGTTGCCTAACTCGCCAACCAGTGGACAAACACCGCCTTTCCACGTCGCAAATGCACGACCTGTTATGCCACTTCCTATGCCAGACCAAAGAATCGGAAACAACTCTTTCCGACCTTTACTTCCAGCTGGCCATGCTCTACCCCAGATTCTACCTCATCCGAATCCTGGTCCTAATGTGTCAAGCCAACAGCCAACTGTCGGATATTCTAATTTGATTAGTTCACTCGTGGCCCAAGGTGTTATCTCATTAGCTAATCAAGCCCCTGCGGAGGATTTTATTGGCCTTGAGTTTGATCCAAATATTCTCAAGGTTCGTCATAAATCTGTAATCCGTGGCTTATATGGTGATTTTCCTAGACAGTGCACAACTTGTGGCCTCCGATTCAAATCCAAAGATGAGCACAGCAGTCACATGGATTGGCATGTAACTAAGAATCGTATGTCTAAAAACAATAAGCAGAAACCCTCTCGCAAGTGGTTTGTGAGTGAGACGATGTGGCTTAAAGGTGCCGAGGCATTGGGAGTCAAGTCAGCTCCAGGTTTTTTGCCAACCGAGACCACTGAAGAAAAGAAAGAAGATGAAGAGTTGGCTGTTCTGGCCGACGAGGACCAAAATACATGTGCATTATGTGGAGAACCTTTTGAGGAGTTTTACAGTGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTATACCTTAATGCGCCTAATGGAATAACAACAGGCATAGACAGGTCGCAGTTAGGCCCCGTTATTCATGCTAAATGCAGATCTTAA

Protein sequence

>Msa0936850

MLARRETPTNSSSVFSHFPRKRCFDEFSYRSNGQPRQNPIALIDAYGSAKRQETSWKNTEEEEFNWEDMIPTPATGKPATIAANATFSASRVFPGLNSNTEYHPPVSPATFETRPSVNVHAPRPPIYPSKNPVRNPFESINANTTTVSHGLINRPIPVHEHGVENNGISKRNLHQLPNSPTSGQTPPFHVANARPVMPLPMPDQRIGNNSFRPLLPAGHALPQILPHPNPGPNVSSQQPTVGYSNLISSLVAQGVISLANQAPAEDFIGLEFDPNILKVRHKSVIRGLYGDFPRQCTTCGLRFKSKDEHSSHMDWHVTKNRMSKNNKQKPSRKWFVSETMWLKGAEALGVKSAPGFLPTETTEEKKEDEELAVLADEDQNTCALCGEPFEEFYSDETEEWMYRGAVYLNAPNGITTGIDRSQLGPVIHAKCRS*