AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0943780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943780 MtrunA17_Chr2g0287651 38.549 703 372 3 29 671 63 765 2.26e-161 497
Msa0943780 MtrunA17_Chr1g0203051 31.472 591 344 8 1 530 31 621 4.74e-98 323
Msa0943780 MtrunA17_Chr5g0448761 30.565 566 328 7 44 545 63 627 2.28e-84 289
Msa0943780 MtrunA17_Chr1g0202341 29.739 575 336 9 42 554 52 620 8.28e-74 258
Msa0943780 MtrunA17_Chr2g0296781 28.485 660 398 13 45 636 1 654 5.87e-72 253
Msa0943780 MtrunA17_Chr2g0324011 27.210 577 352 6 44 558 13 583 2.94e-70 245
Msa0943780 MtrunA17_Chr5g0441581 28.470 562 327 11 44 543 35 583 8.86e-64 229
Msa0943780 MtrunA17_Chr3g0082121 28.571 595 368 10 1 543 1 590 2.53e-63 228
Msa0943780 MtrunA17_Chr6g0458391 28.281 541 344 11 44 543 228 765 7.45e-61 222
Msa0943780 MtrunA17_Chr6g0458391 37.391 115 68 3 44 155 94 207 5.13e-14 76.6
Msa0943780 MtrunA17_Chr1g0207551 28.086 559 337 11 44 543 37 589 1.49e-59 219
Msa0943780 MtrunA17_Chr6g0477261 31.193 436 282 7 218 637 111 544 2.81e-59 216
Msa0943780 MtrunA17_Chr1g0198761 26.676 701 410 18 44 656 50 734 1.17e-58 216
Msa0943780 MtrunA17_Chr2g0287061 27.532 632 399 19 9 605 155 762 2.64e-58 215
Msa0943780 MtrunA17_Chr8g0363841 25.811 647 396 14 44 616 20 656 3.38e-58 213
Msa0943780 MtrunA17_Chr1g0196541 27.612 670 386 19 45 636 1 649 4.50e-56 207
Msa0943780 MtrunA17_Chr3g0080351 26.756 598 356 18 2 543 52 623 6.95e-56 209
Msa0943780 MtrunA17_Chr3g0118611 30.198 404 256 7 222 611 178 569 2.82e-55 206
Msa0943780 MtrunA17_Chr5g0448511 26.782 463 302 8 184 618 12 465 1.66e-54 199
Msa0943780 MtrunA17_Chr5g0440451 25.776 644 371 18 44 609 46 660 7.24e-54 203
Msa0943780 MtrunA17_Chr1g0203721 26.025 561 351 10 44 543 66 623 3.03e-52 198
Msa0943780 MtrunA17_Chr2g0329031 28.743 334 230 4 218 546 234 564 4.59e-47 181
Msa0943780 MtrunA17_Chr2g0291581 26.978 556 342 18 44 543 74 621 7.77e-46 176
Msa0943780 MtrunA17_Chr2g0291591 27.565 497 295 15 22 457 39 531 7.74e-44 168
Msa0943780 MtrunA17_Chr5g0431001 27.553 421 237 8 44 396 64 484 5.27e-43 164
Msa0943780 MtrunA17_Chr2g0294841 23.529 765 442 21 9 659 14 749 3.55e-41 163
Msa0943780 MtrunA17_Chr2g0276841 23.894 565 351 15 44 540 73 626 7.48e-41 161
Msa0943780 MtrunA17_Chr2g0290391 23.509 570 346 12 44 538 54 608 6.28e-37 149
Msa0943780 MtrunA17_Chr2g0308841 31.250 224 154 0 324 547 8 231 8.85e-36 137
Msa0943780 MtrunA17_Chr1g0164591 26.948 308 177 4 115 375 1 307 1.88e-34 135
Msa0943780 MtrunA17_Chr7g0258861 28.315 279 143 4 44 266 13 290 5.14e-27 112
Msa0943780 MtrunA17_Chr1g0149131 31.776 107 68 1 270 371 4 110 1.51e-14 71.2
Msa0943780 MtrunA17_Chr7g0238821 35.185 108 64 2 45 148 1 106 1.56e-14 70.9
Msa0943780 MtrunA17_Chr8g0389811 30.252 119 78 1 34 147 77 195 9.85e-13 68.6
Msa0943780 MtrunA17_Chr6g0451441 32.370 173 103 5 39 203 80 246 1.58e-12 71.2
Msa0943780 MtrunA17_Chr2g0329421 35.514 107 67 2 39 143 25 131 1.80e-12 67.8
Msa0943780 MtrunA17_Chr4g0033611 35.000 100 63 2 44 141 79 178 6.53e-12 67.0
Msa0943780 MtrunA17_Chr7g0233911 40.385 104 56 3 44 142 37 139 8.40e-12 65.9
Msa0943780 MtrunA17_Chr1g0171741 30.400 125 75 2 42 158 134 254 1.10e-11 66.6
Msa0943780 MtrunA17_Chr3g0102191 37.895 95 58 1 918 1012 96 189 1.54e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943780 AT4G38180.1 31.363 609 353 10 2 547 32 638 5.43e-89 303
Msa0943780 AT5G18960.2 27.521 585 364 16 44 591 214 775 4.89e-60 221
Msa0943780 AT5G18960.1 27.521 585 364 16 44 591 214 775 4.89e-60 221
Msa0943780 AT3G06250.2 26.238 606 382 16 23 591 174 751 1.13e-59 219
Msa0943780 AT3G06250.1 26.238 606 382 16 23 591 174 751 1.13e-59 219
Msa0943780 AT3G06250.3 26.238 606 382 16 23 591 174 751 1.13e-59 219
Msa0943780 AT4G15090.1 26.325 566 351 12 44 548 54 614 1.70e-57 214
Msa0943780 AT4G15090.5 26.325 566 351 12 44 548 54 614 1.70e-57 214
Msa0943780 AT4G15090.3 26.325 566 351 12 44 548 54 614 1.70e-57 214
Msa0943780 AT4G15090.2 26.325 566 351 12 44 548 54 614 1.70e-57 214
Msa0943780 AT4G15090.4 26.325 566 351 12 44 548 54 614 1.70e-57 214
Msa0943780 AT2G27110.2 26.154 585 365 14 3 543 18 579 8.85e-56 209
Msa0943780 AT2G27110.1 26.154 585 365 14 3 543 18 579 8.85e-56 209
Msa0943780 AT3G22170.2 26.071 560 354 14 42 548 71 623 1.49e-55 208
Msa0943780 AT3G22170.1 26.071 560 354 14 42 548 71 623 1.49e-55 208
Msa0943780 AT1G76320.2 26.944 553 343 15 45 544 1 545 1.24e-51 195
Msa0943780 AT1G76320.1 26.944 553 343 15 45 544 1 545 1.52e-51 194
Msa0943780 AT1G76320.4 26.944 553 343 15 45 544 1 545 1.52e-51 194
Msa0943780 AT1G76320.3 26.944 553 343 15 45 544 1 545 1.89e-51 193
Msa0943780 AT2G27110.3 30.909 330 220 3 219 543 108 434 3.35e-49 187
Msa0943780 AT2G32250.2 24.952 521 356 12 44 540 41 550 6.85e-48 184
Msa0943780 AT2G32250.4 24.952 521 356 12 44 540 41 550 6.85e-48 184
Msa0943780 AT2G32250.5 25.287 522 353 13 44 540 41 550 7.70e-48 184
Msa0943780 AT2G32250.6 24.952 521 356 12 44 540 41 550 7.97e-48 184
Msa0943780 AT2G32250.1 24.952 521 356 12 44 540 41 550 7.97e-48 184
Msa0943780 AT2G32250.3 24.952 521 356 12 44 540 41 550 7.97e-48 184
Msa0943780 AT4G19990.6 25.271 554 370 14 44 558 24 572 1.81e-47 182
Msa0943780 AT4G19990.2 25.271 554 370 14 44 558 24 572 1.81e-47 182
Msa0943780 AT4G19990.3 25.271 554 370 14 44 558 24 572 1.87e-47 182
Msa0943780 AT4G19990.4 25.271 554 370 14 44 558 24 572 1.87e-47 182
Msa0943780 AT4G19990.5 25.271 554 370 14 44 558 24 572 2.16e-47 182
Msa0943780 AT4G38170.1 25.575 391 269 5 223 600 75 456 2.41e-47 178
Msa0943780 AT4G19990.7 25.271 554 370 14 44 558 38 586 3.09e-47 182
Msa0943780 AT2G32250.8 25.144 521 353 13 45 540 1 509 3.14e-47 182
Msa0943780 AT2G32250.7 25.144 521 353 13 45 540 1 509 3.47e-47 182
Msa0943780 AT1G52520.1 26.199 584 362 17 18 543 66 638 2.11e-46 179
Msa0943780 AT1G80010.1 25.856 584 355 18 44 556 98 674 2.65e-45 176
Msa0943780 AT4G19990.1 24.710 518 347 13 79 558 3 515 5.47e-43 168
Msa0943780 AT1G10240.2 23.457 567 351 15 44 540 51 604 1.11e-39 157
Msa0943780 AT1G10240.1 23.457 567 351 15 44 540 51 604 1.11e-39 157
Msa0943780 AT5G28530.5 24.031 516 355 14 44 542 58 553 3.39e-38 152
Msa0943780 AT5G28530.4 23.166 518 361 13 44 542 58 557 7.51e-38 151
Msa0943780 AT5G28530.3 22.261 575 355 19 44 542 58 616 1.18e-28 123
Msa0943780 AT5G28530.2 22.261 575 355 19 44 542 58 616 1.18e-28 123
Msa0943780 AT5G28530.1 22.010 577 358 19 44 542 58 620 3.69e-28 122
Msa0943780 AT3G07500.1 37.692 130 70 4 22 141 8 136 7.74e-15 75.1
Msa0943780 AT3G59470.3 32.639 144 88 5 7 143 33 174 6.75e-12 67.4
Msa0943780 AT3G59470.1 32.639 144 88 5 7 143 33 174 6.75e-12 67.4
Msa0943780 AT4G12850.4 34.559 136 77 4 39 166 9 140 7.37e-12 64.7
Msa0943780 AT3G59470.2 32.639 144 88 5 7 143 45 186 9.88e-12 67.0
Msa0943780 AT4G12850.2 38.235 102 61 2 39 139 9 109 2.08e-11 63.2
Msa0943780 AT4G12850.1 35.897 117 70 3 44 156 14 129 8.53e-11 62.8

Find 180 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAATAAGTGGAGAGTTTC+TGG 0.119642 6_3:+19824819 Msa0943780:CDS
GAAAAGTCTTCCAAGAATTT+TGG 0.130067 6_3:-19825541 None:intergenic
TGTTAGAACCTGTCATATTT+TGG 0.145212 6_3:+19824959 Msa0943780:CDS
AATTGTCTGCTCGTGGAAAT+TGG 0.180295 6_3:-19827284 None:intergenic
GTCTCATGGCACAAATAATA+TGG 0.183652 6_3:-19826146 None:intergenic
GTAATCATCCTTTGCTGATT+TGG 0.196309 6_3:-19826217 None:intergenic
CATCTTTCCATGTTACATTT+TGG 0.217563 6_3:-19827122 None:intergenic
GCAGACACTGTCCTGCAATT+TGG 0.218987 6_3:-19828161 None:intergenic
AACGTAGATGCAATTTGATT+TGG 0.260815 6_3:-19827222 None:intergenic
GCATGCAATTGCCTCAAATT+TGG 0.264822 6_3:-19828759 None:intergenic
AACTCATTATCATGTCCTTT+TGG 0.270857 6_3:+19828078 Msa0943780:CDS
CGTTGCATCGTCTTTGTTCA+TGG 0.271391 6_3:+19825482 Msa0943780:CDS
CAGACACTGTCCTGCAATTT+GGG 0.276633 6_3:-19828160 None:intergenic
AAAATTGATGCACCTTGATT+TGG 0.276898 6_3:-19827258 None:intergenic
TCACTCAATTGACGGTTCTT+AGG 0.285255 6_3:-19824897 None:intergenic
AAGACCAATCCATCTGTTAT+TGG 0.288862 6_3:+19826432 Msa0943780:CDS
CATTCAAGTTCGGTTGGATA+TGG 0.312603 6_3:+19827315 Msa0943780:CDS
CCTTTGGCCTTGGCTTTGAT+AGG 0.324333 6_3:-19826459 None:intergenic
TTGGCGCCGGTAAAATAATT+AGG 0.326324 6_3:-19827159 None:intergenic
GCAATGTAGCAAAAGCATTC+TGG 0.329828 6_3:+19828546 Msa0943780:intron
TCCAACTCGTTATGCTCATT+TGG 0.331346 6_3:+19824872 Msa0943780:CDS
ATTGTCTGCTCGTGGAAATT+GGG 0.337604 6_3:-19827283 None:intergenic
ACGAGGGGCACCTTTGGCCT+TGG 0.345904 6_3:-19826469 None:intergenic
CAAAGACGATGCAACGAGTT+TGG 0.347736 6_3:-19825475 None:intergenic
TGTGAAGAATCCAAAATTCT+TGG 0.353566 6_3:+19825531 Msa0943780:CDS
TGAAGAAGGAAAAGAGGATA+TGG 0.353695 6_3:+19824515 Msa0943780:CDS
ATACAGGCAGAAAGAGTTAA+TGG 0.354542 6_3:+19825834 Msa0943780:CDS
TGGATACTTACAAGAAGATT+AGG 0.354642 6_3:+19824535 Msa0943780:CDS
GTTATATTCATCCACAAATA+AGG 0.360211 6_3:-19828733 None:intergenic
ATCTTCAGCTGCCTTATTTG+TGG 0.362293 6_3:+19828722 Msa0943780:CDS
GAAAGGAGGTCATGAGAGTC+TGG 0.365097 6_3:+19824998 Msa0943780:CDS
GCAATTTGATTTGGAAATTG+AGG 0.377041 6_3:-19827213 None:intergenic
CTTCTTACGAGGGGCACCTT+TGG 0.378868 6_3:-19826475 None:intergenic
AAGATCGGAACACTTTGAAT+TGG 0.379246 6_3:-19827189 None:intergenic
GAAGGAAAGGTAAGAATAGA+AGG 0.386587 6_3:+19825059 Msa0943780:CDS
CCCACAGTTGCCCAAATTGC+AGG 0.386706 6_3:+19828150 Msa0943780:CDS
GCAAACGATGGAGACATAAA+TGG 0.387588 6_3:+19824459 Msa0943780:CDS
ACATCACGTCCAGCTAGTTC+TGG 0.392972 6_3:-19826567 None:intergenic
CCATCAGTAACCACCCCTTT+AGG 0.408261 6_3:-19825415 None:intergenic
AAGTTTAAGATGAATAGATT+TGG 0.423772 6_3:+19826027 Msa0943780:CDS
ATAGCCTCTTTATAATCATC+TGG 0.427795 6_3:-19826348 None:intergenic
TCTGATAGAGCCCTTGTTGA+TGG 0.433838 6_3:+19824921 Msa0943780:CDS
TGTATCATAAACAGCCTAAA+GGG 0.435243 6_3:+19825401 Msa0943780:CDS
GTATCTAGTTTATCTTGATA+AGG 0.436094 6_3:+19826065 Msa0943780:CDS
CTGATAGTCTAATTTGCAAA+AGG 0.440681 6_3:+19826190 Msa0943780:CDS
TGTAGACAGTTTGAACGGAT+TGG 0.441359 6_3:+19826111 Msa0943780:CDS
TGAGAACACAATCTTTGAAC+CGG 0.453535 6_3:+19828689 Msa0943780:CDS
AGAAGAAATCGTCTAGGAAA+AGG 0.453603 6_3:+19826496 Msa0943780:CDS
CAATTTGGGCAACTGTGGGA+TGG 0.454366 6_3:-19828146 None:intergenic
CAACTATTTGCTGCATTGCA+AGG 0.463046 6_3:-19828596 None:intergenic
GGATACTTACAAGAAGATTA+GGG 0.465987 6_3:+19824536 Msa0943780:CDS
TATCAGATTCACTCAATTGA+CGG 0.466308 6_3:-19824905 None:intergenic
ACAATTTATCAGACAATACA+TGG 0.467170 6_3:+19825632 Msa0943780:CDS
CAAGAAGATTAGGGAATTGA+CGG 0.467663 6_3:+19824545 Msa0943780:CDS
TCTAGTTATCAGTCCCCAAC+TGG 0.468669 6_3:-19828877 None:intergenic
CAATAAAAGAAGATCAAAAC+AGG 0.473627 6_3:+19826814 Msa0943780:CDS
ATTTATGTCTCCATCGTTTG+CGG 0.473976 6_3:-19824457 None:intergenic
TTTCCCATCACATTCAAGTT+CGG 0.475541 6_3:+19827305 Msa0943780:CDS
AATGGTGTGTTTAATGAAGA+AGG 0.477078 6_3:+19824501 Msa0943780:CDS
GAAGATTTAGCCAGCGGTAA+TGG 0.477870 6_3:+19824483 Msa0943780:CDS
GCGTTACCTTGTCGAAACTT+TGG 0.478914 6_3:+19828647 Msa0943780:CDS
TAAATGTTGATACTAATAAG+TGG 0.482914 6_3:+19824808 Msa0943780:CDS
CCATCACATTCAAGTTCGGT+TGG 0.483093 6_3:+19827309 Msa0943780:CDS
GGTGAATGAGAAAACCAGTT+GGG 0.485190 6_3:+19828863 Msa0943780:CDS
ATAGAGCTGTAAAAGAATAC+AGG 0.485647 6_3:+19825818 Msa0943780:CDS
CAATGTGGATGCAAGCTGTT+TGG 0.486170 6_3:+19828842 Msa0943780:CDS
TCTCATGGCACAAATAATAT+GGG 0.494840 6_3:-19826145 None:intergenic
AGTCATGTGCTCGTGTCTCA+TGG 0.495705 6_3:-19826160 None:intergenic
GGATGATGATATAAGAGGAT+TGG 0.496802 6_3:+19824566 Msa0943780:CDS
TTGACGGATGATGATATAAG+AGG 0.497315 6_3:+19824561 Msa0943780:CDS
GAAATCTATGCAGATTGTCA+TGG 0.498853 6_3:+19824624 Msa0943780:CDS
AAATTATAGTTCCTCCATGA+TGG 0.499164 6_3:-19825306 None:intergenic
ATGTATCATAAACAGCCTAA+AGG 0.499586 6_3:+19825400 Msa0943780:CDS
AATATAACAGACCAAATTTG+AGG 0.500882 6_3:+19828748 Msa0943780:CDS
TAAGAACTCAGTTGTTCCTC+AGG 0.501667 6_3:+19828782 Msa0943780:CDS
TATAACTACTTATACAATGA+AGG 0.501991 6_3:+19825041 Msa0943780:CDS
CTTGCAATGCAGCAAATAGT+TGG 0.505054 6_3:+19828597 Msa0943780:CDS
TTGCACTAGATTGAAAATGA+AGG 0.505947 6_3:+19826899 Msa0943780:intron
ATGATAATGAGTTGGCCTAC+TGG 0.506108 6_3:-19828068 None:intergenic
TTTGGAAATTGAGGAAAGAT+CGG 0.506335 6_3:-19827204 None:intergenic
TCCTGCAATTTGGGCAACTG+TGG 0.507825 6_3:-19828151 None:intergenic
ATCACCAATAACAGATGGAT+TGG 0.508027 6_3:-19826436 None:intergenic
GATGTAAACAAAGATGATGA+TGG 0.508994 6_3:+19824666 Msa0943780:CDS
TAGATTGAAAATGAAGGGAT+TGG 0.509056 6_3:+19826905 Msa0943780:intron
AATTTGAAATTGAGTGGAAG+AGG 0.511204 6_3:+19825596 Msa0943780:CDS
TGTTGACAACAAAGTTACAT+AGG 0.512609 6_3:+19825887 Msa0943780:CDS
TTTAGAGTTCCGTGCGGTGG+GGG 0.516345 6_3:-19828816 None:intergenic
GCTGAAGATGCTACTTTCAC+CGG 0.516390 6_3:-19828708 None:intergenic
AGTCTGGTTGATTTCATGCA+TGG 0.520881 6_3:+19825790 Msa0943780:CDS
AACTATTTGCTGCATTGCAA+GGG 0.522292 6_3:-19828595 None:intergenic
AGATGATTATAAAGAGGCTA+TGG 0.524840 6_3:+19826350 Msa0943780:CDS
AAAAGCCAATCTCATCCAAA+AGG 0.525339 6_3:-19828093 None:intergenic
AATTGGAACACCGTTGGCGC+CGG 0.526797 6_3:-19827172 None:intergenic
AGAAACAAAGTACATATTCG+AGG 0.529955 6_3:+19824742 Msa0943780:CDS
ACTTTGAATTGGAACACCGT+TGG 0.530199 6_3:-19827178 None:intergenic
TGCAGATTGTCATGGGTTTG+TGG 0.531824 6_3:+19824632 Msa0943780:CDS
GGGCAACTGTGGGATGGGTG+AGG 0.532080 6_3:-19828140 None:intergenic
AAATCTATGCAGATTGTCAT+GGG 0.533515 6_3:+19824625 Msa0943780:CDS
ATAGTCTAATTTGCAAAAGG+TGG 0.533689 6_3:+19826193 Msa0943780:CDS
CAAAATGTAACATGGAAAGA+TGG 0.535009 6_3:+19827123 Msa0943780:CDS
ATTTGAAATTGAGTGGAAGA+GGG 0.538378 6_3:+19825597 Msa0943780:CDS
TTGTCTGCTCGTGGAAATTG+GGG 0.539211 6_3:-19827282 None:intergenic
ATTTAAATGGCCGCAAACGA+TGG 0.539363 6_3:+19824447 None:intergenic
TGCAGAACACTTAGTTCGAA+TGG 0.539821 6_3:-19824769 None:intergenic
GACGATTTCTTCTTCTTACG+AGG 0.540398 6_3:-19826486 None:intergenic
AATTTGGGCAACTGTGGGAT+GGG 0.541935 6_3:-19828145 None:intergenic
TGCACTAGATTGAAAATGAA+GGG 0.542557 6_3:+19826900 Msa0943780:intron
GTGGCATAAGAACTACATCC+AGG 0.542673 6_3:+19825719 Msa0943780:CDS
GGAAAGGTAAGAATAGAAGG+TGG 0.544372 6_3:+19825062 Msa0943780:CDS
CAACCGAACTTGAATGTGAT+GGG 0.551023 6_3:-19827308 None:intergenic
CATAAAACCCAAAATATGAC+AGG 0.552239 6_3:-19824967 None:intergenic
CCAACCGAACTTGAATGTGA+TGG 0.552349 6_3:-19827309 None:intergenic
ACATCCAGATGATTATAAAG+AGG 0.553282 6_3:+19826344 Msa0943780:CDS
TGAGTTTATGTCTTCACACC+TGG 0.554571 6_3:-19825737 None:intergenic
AATGTCCAGAGTCAAGATCA+AGG 0.560616 6_3:+19827063 Msa0943780:intron
ATTAAACACACCATTACCGC+TGG 0.561779 6_3:-19824493 None:intergenic
AAAAGGACATGATAATGAGT+TGG 0.562000 6_3:-19828076 None:intergenic
CCTGCAATTTGGGCAACTGT+GGG 0.564136 6_3:-19828150 None:intergenic
TGATTATAAAGAGGCTATGG+AGG 0.565059 6_3:+19826353 Msa0943780:CDS
AAGGGATATGTATTCAAAGA+GGG 0.565611 6_3:-19828577 None:intergenic
CAAAACTGTCCAGAACTAGC+TGG 0.566062 6_3:+19826558 Msa0943780:CDS
GTTTAATGAAGAAGGAAAAG+AGG 0.567512 6_3:+19824509 Msa0943780:CDS
ATAGGATCACCAATAACAGA+TGG 0.568307 6_3:-19826441 None:intergenic
AACGAGTTGGAGTTAACTCA+TGG 0.572932 6_3:-19824860 None:intergenic
TGTAACTTTGTTGTCAACAC+AGG 0.574269 6_3:-19825883 None:intergenic
CAAGGGATATGTATTCAAAG+AGG 0.579313 6_3:-19828578 None:intergenic
CTACTTATACAATGAAGGAA+AGG 0.580957 6_3:+19825046 Msa0943780:CDS
CCTAAAGGGGTGGTTACTGA+TGG 0.583557 6_3:+19825415 Msa0943780:CDS
ATGTAAACAAAGATGATGAT+GGG 0.584402 6_3:+19824667 Msa0943780:CDS
GTGATTGTAGACAGTTTGAA+CGG 0.585179 6_3:+19826106 Msa0943780:CDS
TCTAAATGCAGTCAATGAAG+AGG 0.588445 6_3:+19826590 Msa0943780:CDS
AGTTAACTCATGGTTGTGTG+AGG 0.591294 6_3:-19824850 None:intergenic
ACCAAATGAGCATAACGAGT+TGG 0.591556 6_3:-19824873 None:intergenic
GATTATAAAGAGGCTATGGA+GGG 0.593735 6_3:+19826354 Msa0943780:CDS
GTAAGAAGAAGAAATCGTCT+AGG 0.594797 6_3:+19826490 Msa0943780:CDS
ACGATTTCTTCTTCTTACGA+GGG 0.596502 6_3:-19826485 None:intergenic
GTTTGTGTGAGAAAATAAAG+AGG 0.597142 6_3:+19826385 Msa0943780:CDS
TCGATTAGTATGTAATAGAG+AGG 0.600970 6_3:+19824704 Msa0943780:CDS
ATAAAGAGGCGTCGTGAGAG+TGG 0.603066 6_3:+19826399 Msa0943780:CDS
CCTATCAAAGCCAAGGCCAA+AGG 0.609665 6_3:+19826459 Msa0943780:CDS
TTTATGATGGCTCAGAAAGG+AGG 0.609928 6_3:+19824984 Msa0943780:CDS
GTGCATCTAGACCATCAACA+AGG 0.612224 6_3:-19824932 None:intergenic
AAAGGAGGTCATGAGAGTCT+GGG 0.612373 6_3:+19824999 Msa0943780:CDS
TGGAAGACCAAAATGTAACA+TGG 0.612794 6_3:+19827115 Msa0943780:CDS
GTGTTGATAAGAGTTGTGAC+AGG 0.616075 6_3:+19826744 Msa0943780:CDS
TACTCACAGGTGTATGATGA+GGG 0.616777 6_3:-19827353 None:intergenic
TGGTGATCCTATCAAAGCCA+AGG 0.618217 6_3:+19826452 Msa0943780:CDS
GCAGTGTCTCTCAGCGACAG+AGG 0.619332 6_3:+19828625 Msa0943780:CDS
AAAATGTTCATGTTCTGTCG+AGG 0.625769 6_3:+19826276 Msa0943780:CDS
GTTAACTCATGGTTGTGTGA+GGG 0.630795 6_3:-19824849 None:intergenic
ATATGCTGCAACAAGAAGAG+AGG 0.633795 6_3:+19828920 Msa0943780:CDS
CATATGAGATGAAGACAATG+TGG 0.635222 6_3:+19825665 Msa0943780:CDS
GATTTATGCTAATTATACCG+TGG 0.639483 6_3:+19825570 Msa0943780:CDS
CGATTTCTTCTTCTTACGAG+GGG 0.641379 6_3:-19826484 None:intergenic
CGATTAGTATGTAATAGAGA+GGG 0.642038 6_3:+19824705 Msa0943780:CDS
GCACAAATAATATGGGAACA+TGG 0.643217 6_3:-19826138 None:intergenic
ATACTCACAGGTGTATGATG+AGG 0.644284 6_3:-19827354 None:intergenic
GTGAATGAGAAAACCAGTTG+GGG 0.645492 6_3:+19828864 Msa0943780:CDS
AAGGTGGACCAAATCAGCAA+AGG 0.645642 6_3:+19826209 Msa0943780:CDS
CAATTTATCAGACAATACAT+GGG 0.647591 6_3:+19825633 Msa0943780:CDS
GATGGGAAATTGTCTGCTCG+TGG 0.649132 6_3:-19827291 None:intergenic
AATGAGAGAAGCTATCAAAG+AGG 0.650952 6_3:+19825447 Msa0943780:CDS
TCATAAACAGCCTAAAGGGG+TGG 0.651290 6_3:+19825405 Msa0943780:CDS
ATTATAAAGAGGCTATGGAG+GGG 0.655805 6_3:+19826355 Msa0943780:CDS
GTATCATAAACAGCCTAAAG+GGG 0.656109 6_3:+19825402 Msa0943780:CDS
TTCGAACTAAGTGTTCTGCA+AGG 0.661356 6_3:+19824772 Msa0943780:CDS
AGGGATATGTATTCAAAGAG+GGG 0.664302 6_3:-19828576 None:intergenic
TATGTTCTCAGGGTACCAGT+AGG 0.668100 6_3:+19828053 Msa0943780:intron
ATATGAGATGAAGACAATGT+GGG 0.670288 6_3:+19825666 Msa0943780:CDS
TTGTTGCCAAAGTTTCGACA+AGG 0.670815 6_3:-19828653 None:intergenic
TGCATCTAGACCATCAACAA+GGG 0.676129 6_3:-19824931 None:intergenic
AATGGTGAAGATTTAGCCAG+CGG 0.677055 6_3:+19824477 Msa0943780:CDS
ATAATTAGCATAAATCAATG+AGG 0.681924 6_3:-19825563 None:intergenic
TCTGGGTGTAACCATCATGG+AGG 0.690656 6_3:+19825295 Msa0943780:CDS
CCATCGCTTCAGCCACTAGG+GGG 0.696134 6_3:-19828955 None:intergenic
AAACACGTGAGACATACAAG+TGG 0.704359 6_3:+19825353 Msa0943780:CDS
TGGTGAATGAGAAAACCAGT+TGG 0.708891 6_3:+19828862 Msa0943780:CDS
TGTCTGCTCGTGGAAATTGG+GGG 0.715334 6_3:-19827281 None:intergenic
GTTGATGGTCTAGATGCACA+CGG 0.761692 6_3:+19824936 Msa0943780:CDS
CTGATAACTAGAGATCATAG+CGG 0.769709 6_3:+19828888 Msa0943780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTAGTATAAAAAAAA+TGG - chr6_3:19827629-19827648 None:intergenic 10.0%
!!! TTTAGAAAATTTATTTTGGT+CGG + chr6_3:19825174-19825193 Msa0943780:intron 15.0%
!!! TAGTAATTTTATTGAATAAC+AGG + chr6_3:19827934-19827953 Msa0943780:intron 15.0%
!! TAAATGTTGATACTAATAAG+TGG + chr6_3:19824808-19824827 Msa0943780:CDS 20.0%
!! TATAACTACTTATACAATGA+AGG + chr6_3:19825041-19825060 Msa0943780:CDS 20.0%
!!! GACGTTTAGAAAATTTATTT+TGG + chr6_3:19825170-19825189 Msa0943780:intron 20.0%
!! ATAATTAGCATAAATCAATG+AGG - chr6_3:19825566-19825585 None:intergenic 20.0%
!!! AAGTTTAAGATGAATAGATT+TGG + chr6_3:19826027-19826046 Msa0943780:CDS 20.0%
!!! TAATTATAATTTGTTTGCAC+AGG + chr6_3:19826721-19826740 Msa0943780:intron 20.0%
!!! AATTATAATTTGTTTGCACA+GGG + chr6_3:19826722-19826741 Msa0943780:intron 20.0%
!!! TTATCTATCATGTTTTCATT+AGG - chr6_3:19826935-19826954 None:intergenic 20.0%
!!! TATGTTCCTAATTATTTTAC+CGG + chr6_3:19827153-19827172 Msa0943780:CDS 20.0%
!!! TCTCTATTTATGTTAGTTTA+TGG + chr6_3:19827446-19827465 Msa0943780:intron 20.0%
!!! CTCTATTTATGTTAGTTTAT+GGG + chr6_3:19827447-19827466 Msa0943780:intron 20.0%
!!! TTGTTCATTTTTGTTGTTTT+AGG + chr6_3:19827644-19827663 Msa0943780:intron 20.0%
!!! TTAGAGTATTTAAAGTTTGA+AGG + chr6_3:19827784-19827803 Msa0943780:intron 20.0%
! ATGTAAACAAAGATGATGAT+GGG + chr6_3:19824667-19824686 Msa0943780:CDS 25.0%
!!! TCATATTTTGGGTTTTATGA+TGG + chr6_3:19824971-19824990 Msa0943780:CDS 25.0%
!! CTCAATTTCAAATTTTTCCA+CGG - chr6_3:19825590-19825609 None:intergenic 25.0%
!! TGGAAAAATTTGAAATTGAG+TGG + chr6_3:19825590-19825609 Msa0943780:CDS 25.0%
! ACAATTTATCAGACAATACA+TGG + chr6_3:19825632-19825651 Msa0943780:CDS 25.0%
! CAATTTATCAGACAATACAT+GGG + chr6_3:19825633-19825652 Msa0943780:CDS 25.0%
!! GTATCTAGTTTATCTTGATA+AGG + chr6_3:19826065-19826084 Msa0943780:CDS 25.0%
! CAATAAAAGAAGATCAAAAC+AGG + chr6_3:19826814-19826833 Msa0943780:CDS 25.0%
!!! AAGATACTTGATACTTTTTG+TGG + chr6_3:19826843-19826862 Msa0943780:intron 25.0%
! AGTAGTTTCTCATAGTTAAT+TGG + chr6_3:19826983-19827002 Msa0943780:intron 25.0%
! AAAATGGATAAGAATACATG+TGG + chr6_3:19827495-19827514 Msa0943780:intron 25.0%
! ACTCAAAATTATCATCACTT+TGG - chr6_3:19827567-19827586 None:intergenic 25.0%
! CACTATAATTTCAATCATCA+AGG - chr6_3:19827758-19827777 None:intergenic 25.0%
! AATCAATTGAAAGTAACTTC+AGG - chr6_3:19827810-19827829 None:intergenic 25.0%
! ATTGAATAAGTTTAAGCCAT+TGG + chr6_3:19827862-19827881 Msa0943780:intron 25.0%
! CACAACTAAATTAAGTATCA+TGG - chr6_3:19828029-19828048 None:intergenic 25.0%
!! TATGTTCTTTGTTTGAGTTA+TGG + chr6_3:19828189-19828208 Msa0943780:intron 25.0%
! TGCAAAGTAAATAACAAGTT+TGG - chr6_3:19828224-19828243 None:intergenic 25.0%
!! AGATGAATGTCAATATTTTG+TGG + chr6_3:19828389-19828408 Msa0943780:intron 25.0%
! GTTATATTCATCCACAAATA+AGG - chr6_3:19828736-19828755 None:intergenic 25.0%
! AATATAACAGACCAAATTTG+AGG + chr6_3:19828748-19828767 Msa0943780:CDS 25.0%
AATGGTGTGTTTAATGAAGA+AGG + chr6_3:19824501-19824520 Msa0943780:CDS 30.0%
GTTTAATGAAGAAGGAAAAG+AGG + chr6_3:19824509-19824528 Msa0943780:CDS 30.0%
TGGATACTTACAAGAAGATT+AGG + chr6_3:19824535-19824554 Msa0943780:CDS 30.0%
GGATACTTACAAGAAGATTA+GGG + chr6_3:19824536-19824555 Msa0943780:CDS 30.0%
AAATCTATGCAGATTGTCAT+GGG + chr6_3:19824625-19824644 Msa0943780:CDS 30.0%
GATGTAAACAAAGATGATGA+TGG + chr6_3:19824666-19824685 Msa0943780:CDS 30.0%
TCGATTAGTATGTAATAGAG+AGG + chr6_3:19824704-19824723 Msa0943780:CDS 30.0%
CGATTAGTATGTAATAGAGA+GGG + chr6_3:19824705-19824724 Msa0943780:CDS 30.0%
AGAAACAAAGTACATATTCG+AGG + chr6_3:19824742-19824761 Msa0943780:CDS 30.0%
TATCAGATTCACTCAATTGA+CGG - chr6_3:19824908-19824927 None:intergenic 30.0%
! TGTTAGAACCTGTCATATTT+TGG + chr6_3:19824959-19824978 Msa0943780:CDS 30.0%
! GTTAGAACCTGTCATATTTT+GGG + chr6_3:19824960-19824979 Msa0943780:CDS 30.0%
CATAAAACCCAAAATATGAC+AGG - chr6_3:19824970-19824989 None:intergenic 30.0%
CTACTTATACAATGAAGGAA+AGG + chr6_3:19825046-19825065 Msa0943780:CDS 30.0%
GTAAACTTCGAAAAGAACAT+TGG - chr6_3:19825137-19825156 None:intergenic 30.0%
GAAGTTTACACAACAGAATA+AGG + chr6_3:19825148-19825167 Msa0943780:intron 30.0%
!!! AAGCCTCTTGTTATTTTTTC+TGG + chr6_3:19825277-19825296 Msa0943780:CDS 30.0%
!!! AGCCTCTTGTTATTTTTTCT+GGG + chr6_3:19825278-19825297 Msa0943780:CDS 30.0%
AAATTATAGTTCCTCCATGA+TGG - chr6_3:19825309-19825328 None:intergenic 30.0%
! CATGGAGGAACTATAATTTT+TGG + chr6_3:19825310-19825329 Msa0943780:CDS 30.0%
ATGTATCATAAACAGCCTAA+AGG + chr6_3:19825400-19825419 Msa0943780:CDS 30.0%
TGTATCATAAACAGCCTAAA+GGG + chr6_3:19825401-19825420 Msa0943780:CDS 30.0%
TGTGAAGAATCCAAAATTCT+TGG + chr6_3:19825531-19825550 Msa0943780:CDS 30.0%
! GAAAAGTCTTCCAAGAATTT+TGG - chr6_3:19825544-19825563 None:intergenic 30.0%
GATTTATGCTAATTATACCG+TGG + chr6_3:19825570-19825589 Msa0943780:CDS 30.0%
! AATTTGAAATTGAGTGGAAG+AGG + chr6_3:19825596-19825615 Msa0943780:CDS 30.0%
! ATTTGAAATTGAGTGGAAGA+GGG + chr6_3:19825597-19825616 Msa0943780:CDS 30.0%
ATATGAGATGAAGACAATGT+GGG + chr6_3:19825666-19825685 Msa0943780:CDS 30.0%
!!! ATGCGAGAAAACTTTTTTTG+TGG + chr6_3:19825700-19825719 Msa0943780:CDS 30.0%
TGTTGAAAACAAAAACAGTC+TGG + chr6_3:19825774-19825793 Msa0943780:CDS 30.0%
ATAGAGCTGTAAAAGAATAC+AGG + chr6_3:19825818-19825837 Msa0943780:CDS 30.0%
TGTTGACAACAAAGTTACAT+AGG + chr6_3:19825887-19825906 Msa0943780:CDS 30.0%
AAGCTTCAAAAATCTTTACG+AGG + chr6_3:19825920-19825939 Msa0943780:CDS 30.0%
TCTCATGGCACAAATAATAT+GGG - chr6_3:19826148-19826167 None:intergenic 30.0%
! CTTTTGCAAATTAGACTATC+AGG - chr6_3:19826192-19826211 None:intergenic 30.0%
! CTGATAGTCTAATTTGCAAA+AGG + chr6_3:19826190-19826209 Msa0943780:CDS 30.0%
! ATAGTCTAATTTGCAAAAGG+TGG + chr6_3:19826193-19826212 Msa0943780:CDS 30.0%
ACATCCAGATGATTATAAAG+AGG + chr6_3:19826344-19826363 Msa0943780:CDS 30.0%
ATAGCCTCTTTATAATCATC+TGG - chr6_3:19826351-19826370 None:intergenic 30.0%
AGATGATTATAAAGAGGCTA+TGG + chr6_3:19826350-19826369 Msa0943780:CDS 30.0%
GTTTGTGTGAGAAAATAAAG+AGG + chr6_3:19826385-19826404 Msa0943780:CDS 30.0%
CAAAAACACATTTAACACGA+TGG - chr6_3:19826671-19826690 None:intergenic 30.0%
TTGCACTAGATTGAAAATGA+AGG + chr6_3:19826899-19826918 Msa0943780:intron 30.0%
TGCACTAGATTGAAAATGAA+GGG + chr6_3:19826900-19826919 Msa0943780:intron 30.0%
TAGATTGAAAATGAAGGGAT+TGG + chr6_3:19826905-19826924 Msa0943780:intron 30.0%
ATAGATAAAAACATGCACAC+AGG + chr6_3:19826947-19826966 Msa0943780:CDS 30.0%
!! TTTGGTCTTCCATTTTAACA+GGG - chr6_3:19827107-19827126 None:intergenic 30.0%
!! TTTTGGTCTTCCATTTTAAC+AGG - chr6_3:19827108-19827127 None:intergenic 30.0%
! CATCTTTCCATGTTACATTT+TGG - chr6_3:19827125-19827144 None:intergenic 30.0%
CAAAATGTAACATGGAAAGA+TGG + chr6_3:19827123-19827142 Msa0943780:CDS 30.0%
TTTGGAAATTGAGGAAAGAT+CGG - chr6_3:19827207-19827226 None:intergenic 30.0%
!! GCAATTTGATTTGGAAATTG+AGG - chr6_3:19827216-19827235 None:intergenic 30.0%
AACGTAGATGCAATTTGATT+TGG - chr6_3:19827225-19827244 None:intergenic 30.0%
!! CCTTGATTTGGAAAAAATTG+TGG - chr6_3:19827249-19827268 None:intergenic 30.0%
!!! CCACAATTTTTTCCAAATCA+AGG + chr6_3:19827246-19827265 Msa0943780:CDS 30.0%
AAAATTGATGCACCTTGATT+TGG - chr6_3:19827261-19827280 None:intergenic 30.0%
!! ATAATTTTGAGTCGTGCAAA+AGG + chr6_3:19827575-19827594 Msa0943780:intron 30.0%
AAAACAGACATTGGAACAAA+TGG - chr6_3:19827605-19827624 None:intergenic 30.0%
AAAAATGGCAAAACAGACAT+TGG - chr6_3:19827614-19827633 None:intergenic 30.0%
ACAGCAATTATCTATTCCAA+TGG - chr6_3:19827881-19827900 None:intergenic 30.0%
!! TAACAGGTTTGTTAACCATA+TGG + chr6_3:19827950-19827969 Msa0943780:intron 30.0%
GATTGCAAATGAAAACCATA+TGG - chr6_3:19827968-19827987 None:intergenic 30.0%
! CTTTTTGCATGCAATTATCA+CGG + chr6_3:19827988-19828007 Msa0943780:intron 30.0%
AGTTGTGAAAATATGTTCTC+AGG + chr6_3:19828042-19828061 Msa0943780:intron 30.0%
GTTGTGAAAATATGTTCTCA+GGG + chr6_3:19828043-19828062 Msa0943780:intron 30.0%
! AAAAGGACATGATAATGAGT+TGG - chr6_3:19828079-19828098 None:intergenic 30.0%
! AACTCATTATCATGTCCTTT+TGG + chr6_3:19828078-19828097 Msa0943780:CDS 30.0%
!!! TCAAACTTCTGTAGTTTTAG+TGG + chr6_3:19828247-19828266 Msa0943780:intron 30.0%
! AATATTTTGCACCAAACTGA+AGG - chr6_3:19828458-19828477 None:intergenic 30.0%
!! TCAGTTTGGTGCAAAATATT+TGG + chr6_3:19828458-19828477 Msa0943780:intron 30.0%
!! CAGTTTGGTGCAAAATATTT+GGG + chr6_3:19828459-19828478 Msa0943780:intron 30.0%
!! AGTTTGGTGCAAAATATTTG+GGG + chr6_3:19828460-19828479 Msa0943780:intron 30.0%
CTACATTGCATTGCATAAAA+AGG - chr6_3:19828535-19828554 None:intergenic 30.0%
AAGGGATATGTATTCAAAGA+GGG - chr6_3:19828580-19828599 None:intergenic 30.0%
ATTTATGTCTCCATCGTTTG+CGG - chr6_3:19824460-19824479 None:intergenic 35.0%
TGAAGAAGGAAAAGAGGATA+TGG + chr6_3:19824515-19824534 Msa0943780:CDS 35.0%
CAAGAAGATTAGGGAATTGA+CGG + chr6_3:19824545-19824564 Msa0943780:CDS 35.0%
! TTGACGGATGATGATATAAG+AGG + chr6_3:19824561-19824580 Msa0943780:CDS 35.0%
GGATGATGATATAAGAGGAT+TGG + chr6_3:19824566-19824585 Msa0943780:CDS 35.0%
GAAATCTATGCAGATTGTCA+TGG + chr6_3:19824624-19824643 Msa0943780:CDS 35.0%
ACTAATAAGTGGAGAGTTTC+TGG + chr6_3:19824819-19824838 Msa0943780:CDS 35.0%
GAAGGAAAGGTAAGAATAGA+AGG + chr6_3:19825059-19825078 Msa0943780:CDS 35.0%
CAAATCACTCATAGTCAATC+CGG - chr6_3:19825210-19825229 None:intergenic 35.0%
GGATTGACTATGAGTGATTT+GGG + chr6_3:19825209-19825228 Msa0943780:intron 35.0%
GATTGACTATGAGTGATTTG+GGG + chr6_3:19825210-19825229 Msa0943780:intron 35.0%
CACCCAGAAAAAATAACAAG+AGG - chr6_3:19825283-19825302 None:intergenic 35.0%
GTATCATAAACAGCCTAAAG+GGG + chr6_3:19825402-19825421 Msa0943780:CDS 35.0%
AATGAGAGAAGCTATCAAAG+AGG + chr6_3:19825447-19825466 Msa0943780:CDS 35.0%
CATATGAGATGAAGACAATG+TGG + chr6_3:19825665-19825684 Msa0943780:CDS 35.0%
ATACAGGCAGAAAGAGTTAA+TGG + chr6_3:19825834-19825853 Msa0943780:CDS 35.0%
! TGTAACTTTGTTGTCAACAC+AGG - chr6_3:19825886-19825905 None:intergenic 35.0%
GTGATTGTAGACAGTTTGAA+CGG + chr6_3:19826106-19826125 Msa0943780:CDS 35.0%
GCACAAATAATATGGGAACA+TGG - chr6_3:19826141-19826160 None:intergenic 35.0%
GTCTCATGGCACAAATAATA+TGG - chr6_3:19826149-19826168 None:intergenic 35.0%
! GTAATCATCCTTTGCTGATT+TGG - chr6_3:19826220-19826239 None:intergenic 35.0%
AAAATGTTCATGTTCTGTCG+AGG + chr6_3:19826276-19826295 Msa0943780:CDS 35.0%
TGATTATAAAGAGGCTATGG+AGG + chr6_3:19826353-19826372 Msa0943780:CDS 35.0%
GATTATAAAGAGGCTATGGA+GGG + chr6_3:19826354-19826373 Msa0943780:CDS 35.0%
ATTATAAAGAGGCTATGGAG+GGG + chr6_3:19826355-19826374 Msa0943780:CDS 35.0%
AAGACCAATCCATCTGTTAT+TGG + chr6_3:19826432-19826451 Msa0943780:CDS 35.0%
ATCACCAATAACAGATGGAT+TGG - chr6_3:19826439-19826458 None:intergenic 35.0%
ATAGGATCACCAATAACAGA+TGG - chr6_3:19826444-19826463 None:intergenic 35.0%
ACGATTTCTTCTTCTTACGA+GGG - chr6_3:19826488-19826507 None:intergenic 35.0%
GTAAGAAGAAGAAATCGTCT+AGG + chr6_3:19826490-19826509 Msa0943780:CDS 35.0%
AGAAGAAATCGTCTAGGAAA+AGG + chr6_3:19826496-19826515 Msa0943780:CDS 35.0%
TCTAAATGCAGTCAATGAAG+AGG + chr6_3:19826590-19826609 Msa0943780:CDS 35.0%
TGATAAACCCCCTGTTAAAA+TGG + chr6_3:19827095-19827114 Msa0943780:CDS 35.0%
!! TTGGTCTTCCATTTTAACAG+GGG - chr6_3:19827106-19827125 None:intergenic 35.0%
TGGAAGACCAAAATGTAACA+TGG + chr6_3:19827115-19827134 Msa0943780:CDS 35.0%
AAGATCGGAACACTTTGAAT+TGG - chr6_3:19827192-19827211 None:intergenic 35.0%
! TTTCCCATCACATTCAAGTT+CGG + chr6_3:19827305-19827324 Msa0943780:CDS 35.0%
TGAATGTTGTGTATACTCAC+AGG - chr6_3:19827369-19827388 None:intergenic 35.0%
GATGGAACGATTAGCAAAAA+TGG + chr6_3:19827479-19827498 Msa0943780:intron 35.0%
CAGCAGTTAAAGCAACAAAT+AGG - chr6_3:19827685-19827704 None:intergenic 35.0%
CGTGATAATTGCATGCAAAA+AGG - chr6_3:19827990-19828009 None:intergenic 35.0%
AAAAGCCAATCTCATCCAAA+AGG - chr6_3:19828096-19828115 None:intergenic 35.0%
GGTAAAACTTTGTTGATGTC+TGG + chr6_3:19828268-19828287 Msa0943780:intron 35.0%
AAAACTTTGTTGATGTCTGG+TGG + chr6_3:19828271-19828290 Msa0943780:intron 35.0%
CAACAAGTATTCTCAAGCTA+AGG - chr6_3:19828428-19828447 None:intergenic 35.0%
! AAAATATTTGGGGTGTAACG+AGG + chr6_3:19828470-19828489 Msa0943780:intron 35.0%
AGGGATATGTATTCAAAGAG+GGG - chr6_3:19828579-19828598 None:intergenic 35.0%
CAAGGGATATGTATTCAAAG+AGG - chr6_3:19828581-19828600 None:intergenic 35.0%
! AACTATTTGCTGCATTGCAA+GGG - chr6_3:19828598-19828617 None:intergenic 35.0%
TGAGAACACAATCTTTGAAC+CGG + chr6_3:19828689-19828708 Msa0943780:CDS 35.0%
!!! TTGATTTTTAGAGTTCCGTG+CGG - chr6_3:19828825-19828844 None:intergenic 35.0%
! CGGAACTCTAAAAATCAATG+TGG + chr6_3:19828827-19828846 Msa0943780:CDS 35.0%
CTGATAACTAGAGATCATAG+CGG + chr6_3:19828888-19828907 Msa0943780:CDS 35.0%
GCAAACGATGGAGACATAAA+TGG + chr6_3:19824459-19824478 Msa0943780:CDS 40.0%
AATGGTGAAGATTTAGCCAG+CGG + chr6_3:19824477-19824496 Msa0943780:CDS 40.0%
ATTAAACACACCATTACCGC+TGG - chr6_3:19824496-19824515 None:intergenic 40.0%
TGCAGAACACTTAGTTCGAA+TGG - chr6_3:19824772-19824791 None:intergenic 40.0%
TTCGAACTAAGTGTTCTGCA+AGG + chr6_3:19824772-19824791 Msa0943780:CDS 40.0%
GTTAACTCATGGTTGTGTGA+GGG - chr6_3:19824852-19824871 None:intergenic 40.0%
AGTTAACTCATGGTTGTGTG+AGG - chr6_3:19824853-19824872 None:intergenic 40.0%
! AACGAGTTGGAGTTAACTCA+TGG - chr6_3:19824863-19824882 None:intergenic 40.0%
TCCAACTCGTTATGCTCATT+TGG + chr6_3:19824872-19824891 Msa0943780:CDS 40.0%
ACCAAATGAGCATAACGAGT+TGG - chr6_3:19824876-19824895 None:intergenic 40.0%
TCACTCAATTGACGGTTCTT+AGG - chr6_3:19824900-19824919 None:intergenic 40.0%
TGCATCTAGACCATCAACAA+GGG - chr6_3:19824934-19824953 None:intergenic 40.0%
!! GGTTTTATGATGGCTCAGAA+AGG + chr6_3:19824981-19825000 Msa0943780:CDS 40.0%
TTTATGATGGCTCAGAAAGG+AGG + chr6_3:19824984-19825003 Msa0943780:CDS 40.0%
GGAAAGGTAAGAATAGAAGG+TGG + chr6_3:19825062-19825081 Msa0943780:CDS 40.0%
TGCTGCGTTGAGTTATTTGT+AGG + chr6_3:19825094-19825113 Msa0943780:intron 40.0%
CGGATTGACTATGAGTGATT+TGG + chr6_3:19825208-19825227 Msa0943780:intron 40.0%
TTGCATTTGACGCAACTTAC+AGG + chr6_3:19825239-19825258 Msa0943780:intron 40.0%
! TTTTCTGGGTGTAACCATCA+TGG + chr6_3:19825292-19825311 Msa0943780:CDS 40.0%
AAACACGTGAGACATACAAG+TGG + chr6_3:19825353-19825372 Msa0943780:CDS 40.0%
TGAGTTTATGTCTTCACACC+TGG - chr6_3:19825740-19825759 None:intergenic 40.0%
! AGTCTGGTTGATTTCATGCA+TGG + chr6_3:19825790-19825809 Msa0943780:CDS 40.0%
!! GTTTTTGAGCAGTCTAGTCT+CGG + chr6_3:19825994-19826013 Msa0943780:CDS 40.0%
TGTAGACAGTTTGAACGGAT+TGG + chr6_3:19826111-19826130 Msa0943780:CDS 40.0%
CGATTTCTTCTTCTTACGAG+GGG - chr6_3:19826487-19826506 None:intergenic 40.0%
GACGATTTCTTCTTCTTACG+AGG - chr6_3:19826489-19826508 None:intergenic 40.0%
TCTGACCATGACAAAAACGT+TGG + chr6_3:19826627-19826646 Msa0943780:CDS 40.0%
! CACATCCAACGTTTTTGTCA+TGG - chr6_3:19826635-19826654 None:intergenic 40.0%
TGACAAAAACGTTGGATGTG+AGG + chr6_3:19826635-19826654 Msa0943780:CDS 40.0%
! GTGTTGATAAGAGTTGTGAC+AGG + chr6_3:19826744-19826763 Msa0943780:CDS 40.0%
AATGTCCAGAGTCAAGATCA+AGG + chr6_3:19827063-19827082 Msa0943780:intron 40.0%
!! TGGTCTTCCATTTTAACAGG+GGG - chr6_3:19827105-19827124 None:intergenic 40.0%
!! TTGGCGCCGGTAAAATAATT+AGG - chr6_3:19827162-19827181 None:intergenic 40.0%
!! AATTATTTTACCGGCGCCAA+CGG + chr6_3:19827162-19827181 Msa0943780:CDS 40.0%
ACTTTGAATTGGAACACCGT+TGG - chr6_3:19827181-19827200 None:intergenic 40.0%
ATTGTCTGCTCGTGGAAATT+GGG - chr6_3:19827286-19827305 None:intergenic 40.0%
AATTGTCTGCTCGTGGAAAT+TGG - chr6_3:19827287-19827306 None:intergenic 40.0%
CAACCGAACTTGAATGTGAT+GGG - chr6_3:19827311-19827330 None:intergenic 40.0%
! CATTCAAGTTCGGTTGGATA+TGG + chr6_3:19827315-19827334 Msa0943780:CDS 40.0%
TACTCACAGGTGTATGATGA+GGG - chr6_3:19827356-19827375 None:intergenic 40.0%
ATACTCACAGGTGTATGATG+AGG - chr6_3:19827357-19827376 None:intergenic 40.0%
! ATGTTAGTTTATGGGTGCCT+TGG + chr6_3:19827455-19827474 Msa0943780:intron 40.0%
TTGCTTGTGATTCGAGAGTT+TGG - chr6_3:19827532-19827551 None:intergenic 40.0%
AACTCTCGAATCACAAGCAA+TGG + chr6_3:19827532-19827551 Msa0943780:intron 40.0%
ACTCTCGAATCACAAGCAAT+GGG + chr6_3:19827533-19827552 Msa0943780:intron 40.0%
GCTTTAACTGCTGAGAATCA+TGG + chr6_3:19827692-19827711 Msa0943780:intron 40.0%
! ATGATAATGAGTTGGCCTAC+TGG - chr6_3:19828071-19828090 None:intergenic 40.0%
! CATGTCCTTTTGGATGAGAT+TGG + chr6_3:19828088-19828107 Msa0943780:CDS 40.0%
!!! TTGGATGAGATTGGCTTTTC+TGG + chr6_3:19828097-19828116 Msa0943780:CDS 40.0%
! AGGTGCTTGTTAACACATTG+TGG - chr6_3:19828515-19828534 None:intergenic 40.0%
!! GCAATGTAGCAAAAGCATTC+TGG + chr6_3:19828546-19828565 Msa0943780:intron 40.0%
! CAACTATTTGCTGCATTGCA+AGG - chr6_3:19828599-19828618 None:intergenic 40.0%
CTTGCAATGCAGCAAATAGT+TGG + chr6_3:19828597-19828616 Msa0943780:CDS 40.0%
TTGTTGCCAAAGTTTCGACA+AGG - chr6_3:19828656-19828675 None:intergenic 40.0%
!! ATCTTCAGCTGCCTTATTTG+TGG + chr6_3:19828722-19828741 Msa0943780:CDS 40.0%
GCATGCAATTGCCTCAAATT+TGG - chr6_3:19828762-19828781 None:intergenic 40.0%
TAAGAACTCAGTTGTTCCTC+AGG + chr6_3:19828782-19828801 Msa0943780:CDS 40.0%
TGGTGAATGAGAAAACCAGT+TGG + chr6_3:19828862-19828881 Msa0943780:CDS 40.0%
GGTGAATGAGAAAACCAGTT+GGG + chr6_3:19828863-19828882 Msa0943780:CDS 40.0%
GTGAATGAGAAAACCAGTTG+GGG + chr6_3:19828864-19828883 Msa0943780:CDS 40.0%
ATATGCTGCAACAAGAAGAG+AGG + chr6_3:19828920-19828939 Msa0943780:CDS 40.0%
GAAGATTTAGCCAGCGGTAA+TGG + chr6_3:19824483-19824502 Msa0943780:CDS 45.0%
TGCAGATTGTCATGGGTTTG+TGG + chr6_3:19824632-19824651 Msa0943780:CDS 45.0%
TCTGATAGAGCCCTTGTTGA+TGG + chr6_3:19824921-19824940 Msa0943780:CDS 45.0%
GTGCATCTAGACCATCAACA+AGG - chr6_3:19824935-19824954 None:intergenic 45.0%
!! GTTGATGGTCTAGATGCACA+CGG + chr6_3:19824936-19824955 Msa0943780:CDS 45.0%
AAAGGAGGTCATGAGAGTCT+GGG + chr6_3:19824999-19825018 Msa0943780:CDS 45.0%
!! ATGAGAGTCTGGGATTTTGC+AGG + chr6_3:19825009-19825028 Msa0943780:CDS 45.0%
! CTATGAGTGATTTGGGGATG+TGG + chr6_3:19825216-19825235 Msa0943780:intron 45.0%
TCATAAACAGCCTAAAGGGG+TGG + chr6_3:19825405-19825424 Msa0943780:CDS 45.0%
CAAAGACGATGCAACGAGTT+TGG - chr6_3:19825478-19825497 None:intergenic 45.0%
CGTTGCATCGTCTTTGTTCA+TGG + chr6_3:19825482-19825501 Msa0943780:CDS 45.0%
GTGGCATAAGAACTACATCC+AGG + chr6_3:19825719-19825738 Msa0943780:CDS 45.0%
AAGGTGGACCAAATCAGCAA+AGG + chr6_3:19826209-19826228 Msa0943780:CDS 45.0%
TGGTGATCCTATCAAAGCCA+AGG + chr6_3:19826452-19826471 Msa0943780:CDS 45.0%
CAAAACTGTCCAGAACTAGC+TGG + chr6_3:19826558-19826577 Msa0943780:CDS 45.0%
CAACACCTTGATCTTGACTC+TGG - chr6_3:19827071-19827090 None:intergenic 45.0%
TTGTCTGCTCGTGGAAATTG+GGG - chr6_3:19827285-19827304 None:intergenic 45.0%
CCAACCGAACTTGAATGTGA+TGG - chr6_3:19827312-19827331 None:intergenic 45.0%
! CCATCACATTCAAGTTCGGT+TGG + chr6_3:19827309-19827328 Msa0943780:CDS 45.0%
TGCTAATCGTTCCATCTCCA+AGG - chr6_3:19827475-19827494 None:intergenic 45.0%
! TATGTTCTCAGGGTACCAGT+AGG + chr6_3:19828053-19828072 Msa0943780:intron 45.0%
!!! GAGATTGGCTTTTCTGGTAG+CGG + chr6_3:19828103-19828122 Msa0943780:CDS 45.0%
AATTTGGGCAACTGTGGGAT+GGG - chr6_3:19828148-19828167 None:intergenic 45.0%
CAGACACTGTCCTGCAATTT+GGG - chr6_3:19828163-19828182 None:intergenic 45.0%
! GCTTGTTAACACATTGTGGC+AGG - chr6_3:19828511-19828530 None:intergenic 45.0%
GCGTTACCTTGTCGAAACTT+TGG + chr6_3:19828647-19828666 Msa0943780:CDS 45.0%
!! GCTGAAGATGCTACTTTCAC+CGG - chr6_3:19828711-19828730 None:intergenic 45.0%
!!! TTTTTAGAGTTCCGTGCGGT+GGG - chr6_3:19828821-19828840 None:intergenic 45.0%
!!! ATTTTTAGAGTTCCGTGCGG+TGG - chr6_3:19828822-19828841 None:intergenic 45.0%
CAATGTGGATGCAAGCTGTT+TGG + chr6_3:19828842-19828861 Msa0943780:CDS 45.0%
TCTAGTTATCAGTCCCCAAC+TGG - chr6_3:19828880-19828899 None:intergenic 45.0%
GAAAGGAGGTCATGAGAGTC+TGG + chr6_3:19824998-19825017 Msa0943780:CDS 50.0%
!! GAGTCTGGGATTTTGCAGGA+AGG + chr6_3:19825013-19825032 Msa0943780:CDS 50.0%
TTTGGTCGGATTCAACCAGC+CGG + chr6_3:19825188-19825207 Msa0943780:intron 50.0%
TCACTCATAGTCAATCCGGC+TGG - chr6_3:19825206-19825225 None:intergenic 50.0%
TCTGGGTGTAACCATCATGG+AGG + chr6_3:19825295-19825314 Msa0943780:CDS 50.0%
CCATCAGTAACCACCCCTTT+AGG - chr6_3:19825418-19825437 None:intergenic 50.0%
CCTAAAGGGGTGGTTACTGA+TGG + chr6_3:19825415-19825434 Msa0943780:CDS 50.0%
AGTCATGTGCTCGTGTCTCA+TGG - chr6_3:19826163-19826182 None:intergenic 50.0%
!! ATAAAGAGGCGTCGTGAGAG+TGG + chr6_3:19826399-19826418 Msa0943780:CDS 50.0%
!! CCTTTGGCCTTGGCTTTGAT+AGG - chr6_3:19826462-19826481 None:intergenic 50.0%
CCTATCAAAGCCAAGGCCAA+AGG + chr6_3:19826459-19826478 Msa0943780:CDS 50.0%
ACATCACGTCCAGCTAGTTC+TGG - chr6_3:19826570-19826589 None:intergenic 50.0%
TGTCTGCTCGTGGAAATTGG+GGG - chr6_3:19827284-19827303 None:intergenic 50.0%
GATGGGAAATTGTCTGCTCG+TGG - chr6_3:19827294-19827313 None:intergenic 50.0%
GTTTATGGGTGCCTTGGAGA+TGG + chr6_3:19827461-19827480 Msa0943780:intron 50.0%
CAATTTGGGCAACTGTGGGA+TGG - chr6_3:19828149-19828168 None:intergenic 50.0%
CCTGCAATTTGGGCAACTGT+GGG - chr6_3:19828153-19828172 None:intergenic 50.0%
TCCTGCAATTTGGGCAACTG+TGG - chr6_3:19828154-19828173 None:intergenic 50.0%
GCAGACACTGTCCTGCAATT+TGG - chr6_3:19828164-19828183 None:intergenic 50.0%
GATGACCTTTGCTGCAAGGT+CGG + chr6_3:19828293-19828312 Msa0943780:intron 50.0%
ATGACCTTTGCTGCAAGGTC+GGG + chr6_3:19828294-19828313 Msa0943780:intron 50.0%
GTTGTCACGTGCCTTCAGTT+TGG + chr6_3:19828444-19828463 Msa0943780:intron 50.0%
! TTTGGGGTGTAACGAGGTGT+CGG + chr6_3:19828476-19828495 Msa0943780:intron 50.0%
!!! TTTTAGAGTTCCGTGCGGTG+GGG - chr6_3:19828820-19828839 None:intergenic 50.0%
!! CTTCTTACGAGGGGCACCTT+TGG - chr6_3:19826478-19826497 None:intergenic 55.0%
AATTGGAACACCGTTGGCGC+CGG - chr6_3:19827175-19827194 None:intergenic 55.0%
CCCACAGTTGCCCAAATTGC+AGG + chr6_3:19828150-19828169 Msa0943780:CDS 55.0%
GGTGGATGACCTTTGCTGCA+AGG + chr6_3:19828289-19828308 Msa0943780:intron 55.0%
AAGACCCGACCTTGCAGCAA+AGG - chr6_3:19828301-19828320 None:intergenic 55.0%
CGTGACACGTGCATGTCTGA+AGG - chr6_3:19828350-19828369 None:intergenic 55.0%
! TTTAGAGTTCCGTGCGGTGG+GGG - chr6_3:19828819-19828838 None:intergenic 55.0%
GCAGTGTCTCTCAGCGACAG+AGG + chr6_3:19828625-19828644 Msa0943780:CDS 60.0%
!! ACGAGGGGCACCTTTGGCCT+TGG - chr6_3:19826472-19826491 None:intergenic 65.0%
GGGCAACTGTGGGATGGGTG+AGG - chr6_3:19828143-19828162 None:intergenic 65.0%
AAGTGTCAGCCCCCACCGCA+CGG + chr6_3:19828807-19828826 Msa0943780:CDS 65.0%
GGGGGCTGACACTTGGCCTG+AGG - chr6_3:19828801-19828820 None:intergenic 70.0%
GTGCGGTGGGGGCTGACACT+TGG - chr6_3:19828808-19828827 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 19824453 19828962 19824453 ID=Msa0943780;Name=Msa0943780
chr6_3 mRNA 19824453 19828962 19824453 ID=Msa0943780-mRNA-1;Parent=Msa0943780;Name=Msa0943780-mRNA-1;_AED=0.17;_eAED=0.18;_QI=0|0.5|0.42|0.71|1|1|7|0|1012
chr6_3 exon 19824453 19825111 19824453 ID=Msa0943780-mRNA-1:exon:5931;Parent=Msa0943780-mRNA-1
chr6_3 exon 19825261 19826656 19825261 ID=Msa0943780-mRNA-1:exon:5932;Parent=Msa0943780-mRNA-1
chr6_3 exon 19826743 19826835 19826743 ID=Msa0943780-mRNA-1:exon:5933;Parent=Msa0943780-mRNA-1
chr6_3 exon 19826908 19826979 19826908 ID=Msa0943780-mRNA-1:exon:5934;Parent=Msa0943780-mRNA-1
chr6_3 exon 19827072 19827368 19827072 ID=Msa0943780-mRNA-1:exon:5935;Parent=Msa0943780-mRNA-1
chr6_3 exon 19828064 19828177 19828064 ID=Msa0943780-mRNA-1:exon:5936;Parent=Msa0943780-mRNA-1
chr6_3 exon 19828555 19828962 19828555 ID=Msa0943780-mRNA-1:exon:5937;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19824453 19825111 19824453 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19825261 19826656 19825261 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19826743 19826835 19826743 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19826908 19826979 19826908 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19827072 19827368 19827072 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19828064 19828177 19828064 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
chr6_3 CDS 19828555 19828962 19828555 ID=Msa0943780-mRNA-1:cds;Parent=Msa0943780-mRNA-1
Gene Sequence

>Msa0943780

ATGGCCGCAAACGATGGAGACATAAATGGTGAAGATTTAGCCAGCGGTAATGGTGTGTTTAATGAAGAAGGAAAAGAGGATATGGATACTTACAAGAAGATTAGGGAATTGACGGATGATGATATAAGAGGATTGGAATTTGATTCAGAGCAAAAAGCGACACAATTTTATGAAATCTATGCAGATTGTCATGGGTTTGTGGTAAGAAAAGATGATGTAAACAAAGATGATGATGGGAATATAATTGCACGTCGATTAGTATGTAATAGAGAGGGTGAGAATAAAAATAAGAAACAAAGTACATATTCGAGGCAGACCATTCGAACTAAGTGTTCTGCAAGGCTTCGAGTAGTTTTAAATGTTGATACTAATAAGTGGAGAGTTTCTGGATTCGAGCCCTCACACAACCATGAGTTAACTCCAACTCGTTATGCTCATTTGGTTCCTAAGAACCGTCAATTGAGTGAATCTGATAGAGCCCTTGTTGATGGTCTAGATGCACACGGTGTTAGAACCTGTCATATTTTGGGTTTTATGATGGCTCAGAAAGGAGGTCATGAGAGTCTGGGATTTTGCAGGAAGGACTTATATAACTACTTATACAATGAAGGAAAGGTAAGAATAGAAGGTGGAGATTCTTTTGCTGCGTTGAGTTATTTGAAGAACAGATATGACAAGCCTCTTGTTATTTTTTCTGGGTGTAACCATCATGGAGGAACTATAATTTTTGGTTGTGCTTTAGTTTCTAATGAAACACGTGAGACATACAAGTGGCTTTTAAATACATTTTTAGAAGCAATGTATCATAAACAGCCTAAAGGGGTGGTTACTGATGGAGATCTTTCAATGAGAGAAGCTATCAAAGAGGTATTTCCAAACTCGTTGCATCGTCTTTGTTCATGGCATTTTCATCGAAACGCTGAAGAGAATGTGAAGAATCCAAAATTCTTGGAAGACTTTTCCTCATTGATTTATGCTAATTATACCGTGGAAAAATTTGAAATTGAGTGGAAGAGGGTCATTGATGATTACAATTTATCAGACAATACATGGGTTAAAAAAGCATATGAGATGAAGACAATGTGGGCGAGTGCATACATGCGAGAAAACTTTTTTTGTGGCATAAGAACTACATCCAGGTGTGAAGACATAAACTCATTTATAAATATGTATGTTGAAAACAAAAACAGTCTGGTTGATTTCATGCATGGTTTTAATAGAGCTGTAAAAGAATACAGGCAGAAAGAGTTAATGGCATATTTTAATACGTTCTATTACAAACCTGTGTTGACAACAAAGTTACATAGGTTTGAGCTTGAAGCTTCAAAAATCTTTACGAGGATAAAATTTTATGAAGTTCAAAATGAAATAGAAGATGCAATCACATTAAATGTTTTTGAGCAGTCTAGTCTCGGAAAGACTGTGAAGTTTAAGATGAATAGATTTGGCAACAAAGATTCTACGTATCTAGTTTATCTTGATAAGGAACAAAGTAAATTTTTATGTGATTGTAGACAGTTTGAACGGATTGGAATTCCATGTTCCCATATTATTTGTGCCATGAGACACGAGCACATGACTGAGCTTCCTGATAGTCTAATTTGCAAAAGGTGGACCAAATCAGCAAAGGATGATTACATATCGTCTATGTCTTCTAAAGAATGTGATGATGAAAAAATGTTCATGTTCTGTCGAGGAACTATGTCTACTGCATTGAATAATCTATATGACATTTCTTGTAAACATCCAGATGATTATAAAGAGGCTATGGAGGGGATTTATAGTTTGTGTGAGAAAATAAAGAGGCGTCGTGAGAGTGGTGAAAAATATAAGACCAATCCATCTGTTATTGGTGATCCTATCAAAGCCAAGGCCAAAGGTGCCCCTCGTAAGAAGAAGAAATCGTCTAGGAAAAGGAGACATTGTTCTGTCTGCAAAAATATTGCTCACACGAAGCAAAACTGTCCAGAACTAGCTGGACGTGATGTTCTAAATGCAGTCAATGAAGAGGACTATTCTCGTCGATCTGACCATGACAAAAACGTTGGATGTGAGGGTGTTGATAAGAGTTGTGACAGGAAACGTAAGAGAAAAGTTGTCAATGTTACTTCAATGCAAGAAGATATCAATAAAAGAAGATCAAAACAGATTGAAAATGAAGGGATTGGTCGACCTAATGAAAACATGATAGATAAAAACATGCACACAGGATTTGACAACAGTCAAGATCAAGGTGTTGTACATGATAAACCCCCTGTTAAAATGGAAGACCAAAATGTAACATGGAAAGATGGTTCAATGTATGTTCCTAATTATTTTACCGGCGCCAACGGTGTTCCAATTCAAAGTGTTCCGATCTTTCCTCAATTTCCAAATCAAATTGCATCTACGTTTCCACAATTTTTTCCAAATCAAGGTGCATCAATTTTCCCCCAATTTCCACGAGCAGACAATTTCCCATCACATTCAAGTTCGGTTGGATATGGCAGAGCACATAATGTCCCTCATCATACACCTGGTACCAGTAGGCCAACTCATTATCATGTCCTTTTGGATGAGATTGGCTTTTCTGGTAGCGGTCGTGATATCAATGCCTCACCCATCCCACAGTTGCCCAAATTGCAGGACAGTCAAAAGCATTCTGGTTTACATCCCCTCTTTGAATACATATCCCTTGCAATGCAGCAAATAGTTGGCTGCTGCAGTGTCTCTCAGCGACAGAGGCGTTACCTTGTCGAAACTTTGGCAACAAATACTTTTGTCTTTGAGAACACAATCTTTGAACCGGTGAAAGTAGCATCTTCAGCTGCCTTATTTGTGGATGAATATAACAGACCAAATTTGAGGCAATTGCATGCTAAGAACTCAGTTGTTCCTCAGGCCAAGTGTCAGCCCCCACCGCACGGAACTCTAAAAATCAATGTGGATGCAAGCTGTTTGGTGAATGAGAAAACCAGTTGGGGACTGATAACTAGAGATCATAGCGGATCAGTTTTATATGCTGCAACAAGAAGAGAGGACATTCAAGTCTCCCCCTAG
Protein sequence

>Msa0943780

MAANDGDINGEDLASGNGVFNEEGKEDMDTYKKIRELTDDDIRGLEFDSEQKATQFYEIYADCHGFVVRKDDVNKDDDGNIIARRLVCNREGENKNKKQSTYSRQTIRTKCSARLRVVLNVDTNKWRVSGFEPSHNHELTPTRYAHLVPKNRQLSESDRALVDGLDAHGVRTCHILGFMMAQKGGHESLGFCRKDLYNYLYNEGKVRIEGGDSFAALSYLKNRYDKPLVIFSGCNHHGGTIIFGCALVSNETRETYKWLLNTFLEAMYHKQPKGVVTDGDLSMREAIKEVFPNSLHRLCSWHFHRNAEENVKNPKFLEDFSSLIYANYTVEKFEIEWKRVIDDYNLSDNTWVKKAYEMKTMWASAYMRENFFCGIRTTSRCEDINSFINMYVENKNSLVDFMHGFNRAVKEYRQKELMAYFNTFYYKPVLTTKLHRFELEASKIFTRIKFYEVQNEIEDAITLNVFEQSSLGKTVKFKMNRFGNKDSTYLVYLDKEQSKFLCDCRQFERIGIPCSHIICAMRHEHMTELPDSLICKRWTKSAKDDYISSMSSKECDDEKMFMFCRGTMSTALNNLYDISCKHPDDYKEAMEGIYSLCEKIKRRRESGEKYKTNPSVIGDPIKAKAKGAPRKKKKSSRKRRHCSVCKNIAHTKQNCPELAGRDVLNAVNEEDYSRRSDHDKNVGCEGVDKSCDRKRKRKVVNVTSMQEDINKRRSKQIENEGIGRPNENMIDKNMHTGFDNSQDQGVVHDKPPVKMEDQNVTWKDGSMYVPNYFTGANGVPIQSVPIFPQFPNQIASTFPQFFPNQGASIFPQFPRADNFPSHSSSVGYGRAHNVPHHTPGTSRPTHYHVLLDEIGFSGSGRDINASPIPQLPKLQDSQKHSGLHPLFEYISLAMQQIVGCCSVSQRQRRYLVETLATNTFVFENTIFEPVKVASSAALFVDEYNRPNLRQLHAKNSVVPQAKCQPPPHGTLKINVDASCLVNEKTSWGLITRDHSGSVLYAATRREDIQVSP*