AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0943840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943840 MtrunA17_Chr6g0460611 86.957 92 12 0 85 176 1 92 5.08e-56 171
Msa0943840 MtrunA17_Chr6g0481041 35.294 170 101 3 1 164 1 167 2.22e-27 107
Msa0943840 MtrunA17_Chr4g0024351 32.374 139 93 1 26 164 61 198 8.07e-23 94.4
Msa0943840 MtrunA17_Chr2g0322731 29.560 159 108 2 9 164 81 238 7.77e-22 91.7
Msa0943840 MtrunA17_Chr7g0246631 30.460 174 113 3 4 174 74 242 1.94e-20 87.8
Msa0943840 MtrunA17_Chr6g0472471 34.375 160 93 4 11 164 54 207 2.71e-19 84.3
Msa0943840 MtrunA17_Chr1g0203671 32.414 145 89 2 24 164 94 233 7.99e-19 83.2
Msa0943840 MtrunA17_Chr8g0350321 28.571 161 107 2 11 164 94 253 1.88e-17 79.0
Msa0943840 MtrunA17_Chr5g0410711 27.397 146 106 0 11 156 75 220 2.19e-17 79.0
Msa0943840 MtrunA17_Chr2g0331581 29.710 138 90 2 29 162 143 277 1.54e-15 73.6
Msa0943840 MtrunA17_Chr7g0224481 31.624 117 68 1 40 156 31 135 4.13e-15 71.6
Msa0943840 MtrunA17_Chr7g0224451 31.624 117 68 1 40 156 31 135 5.43e-15 71.6
Msa0943840 MtrunA17_Chr5g0419821 37.273 110 66 2 40 148 49 156 4.68e-14 66.6
Msa0943840 MtrunA17_Chr5g0394111 34.862 109 67 3 40 147 48 153 1.07e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943840 AT1G73360.1 39.161 143 84 2 23 164 30 170 2.50e-29 113
Msa0943840 AT1G17920.2 42.735 117 64 2 49 164 45 159 2.12e-25 102
Msa0943840 AT1G17920.1 42.735 117 64 2 49 164 45 159 2.12e-25 102
Msa0943840 AT1G05230.3 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.8 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.4 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.9 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.10 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.7 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.11 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.2 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.6 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.5 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT1G05230.1 31.410 156 103 2 9 164 51 202 3.81e-22 92.8
Msa0943840 AT3G03260.2 32.468 154 104 0 7 160 5 158 5.79e-21 89.4
Msa0943840 AT3G03260.1 37.190 121 76 0 40 160 38 158 6.82e-21 89.4
Msa0943840 AT4G21750.2 31.373 153 100 2 13 161 46 197 7.07e-21 89.4
Msa0943840 AT4G21750.1 31.373 153 100 2 13 161 46 197 7.07e-21 89.4
Msa0943840 AT4G21750.3 31.373 153 100 2 13 161 46 197 7.07e-21 89.4
Msa0943840 AT4G21750.4 31.373 153 100 2 13 161 46 197 7.07e-21 89.4
Msa0943840 AT1G05230.12 31.410 156 103 2 9 164 51 202 2.36e-20 87.8
Msa0943840 AT4G04890.2 31.788 151 101 2 11 161 49 197 1.18e-19 85.9
Msa0943840 AT4G04890.1 31.788 151 101 2 11 161 49 197 1.18e-19 85.9
Msa0943840 AT3G61150.1 30.822 146 99 2 11 156 97 240 4.34e-18 81.3
Msa0943840 AT5G17320.1 32.624 141 95 0 16 156 17 157 1.96e-17 79.3
Msa0943840 AT4G00730.1 29.655 145 92 3 17 156 125 264 7.89e-17 77.8
Msa0943840 AT4G00730.2 29.655 145 92 3 17 156 125 264 1.73e-16 76.6
Msa0943840 AT5G46880.3 26.623 154 97 3 12 156 93 239 2.61e-16 76.3
Msa0943840 AT5G46880.1 26.623 154 97 3 12 156 93 239 2.61e-16 76.3
Msa0943840 AT5G46880.2 26.623 154 97 3 12 156 93 239 2.61e-16 76.3
Msa0943840 AT5G52170.2 32.836 134 89 1 29 162 61 193 5.00e-16 75.5
Msa0943840 AT5G52170.3 32.836 134 89 1 29 162 61 193 5.09e-16 75.5
Msa0943840 AT5G52170.1 32.836 134 89 1 29 162 61 193 5.09e-16 75.5
Msa0943840 AT1G79840.3 29.371 143 89 2 15 155 33 165 9.79e-16 74.3
Msa0943840 AT1G79840.6 29.371 143 89 2 15 155 33 165 9.79e-16 74.3
Msa0943840 AT1G34650.1 32.331 133 89 1 33 165 24 155 1.73e-15 73.9
Msa0943840 AT1G79840.5 28.859 149 89 3 9 155 90 223 2.87e-14 70.1
Msa0943840 AT1G79840.4 28.859 149 89 3 9 155 90 223 3.04e-14 70.1
Msa0943840 AT1G79840.1 28.859 149 89 3 9 155 90 223 4.03e-14 69.7
Msa0943840 AT1G79840.2 28.859 149 89 3 9 155 119 252 4.91e-14 69.7
Msa0943840 AT4G17710.1 27.559 127 79 1 28 154 91 204 1.17e-13 68.6

Find 34 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTCGTTGGGCTTCATT+TGG 0.279004 6_3:+19896300 None:intergenic
GAACCAAGATTTGATTTGTT+TGG 0.287062 6_3:+19896251 None:intergenic
AACCAAGATTTGATTTGTTT+GGG 0.304941 6_3:+19896252 None:intergenic
ATGGGAGGCGTCGGTGGGTC+TGG 0.334236 6_3:-19896867 Msa0943840:CDS
AGCCCAAACAAATCAAATCT+TGG 0.386306 6_3:-19896254 Msa0943840:CDS
GATTTCGTTGGGCTTCATTT+GGG 0.397275 6_3:+19896301 None:intergenic
CTTAGCTAATTGATTTCGTT+GGG 0.409743 6_3:+19896290 None:intergenic
ATCAATTAGCTAAGGAGGTT+GGG 0.412482 6_3:-19896281 Msa0943840:CDS
AATCTTGGTTCGATAATAAG+AGG 0.416511 6_3:-19896239 Msa0943840:CDS
CCTTAGCTAATTGATTTCGT+TGG 0.420498 6_3:+19896289 None:intergenic
AACGTTCATGCTCATGCATT+GGG 0.431887 6_3:+19895969 None:intergenic
TCTGTTCGTACTTTGCTAGC+AGG 0.432332 6_3:+19895775 None:intergenic
CTGTTCGTACTTTGCTAGCA+GGG 0.445221 6_3:+19895776 None:intergenic
TATTCGATGGGAGGCGTCGG+TGG 0.460383 6_3:-19896873 Msa0943840:CDS
ATCTGAGACTGAGTTATCAA+TGG 0.465187 6_3:+19896836 None:intergenic
AATCAATTAGCTAAGGAGGT+TGG 0.482913 6_3:-19896282 Msa0943840:CDS
TTTGAATAAAGATTCATGGC+AGG 0.493133 6_3:-19896333 Msa0943840:intron
AAACGTTCATGCTCATGCAT+TGG 0.496436 6_3:+19895968 None:intergenic
TTTCATGCAAAAGATGAGAA+TGG 0.506914 6_3:-19895948 Msa0943840:CDS
TTGAATAAAGATTCATGGCA+GGG 0.511003 6_3:-19896332 Msa0943840:intron
CCACTAAAACCTTTGTATTG+TGG 0.519309 6_3:+19896801 None:intergenic
ATTCGATGGGAGGCGTCGGT+GGG 0.547865 6_3:-19896872 Msa0943840:CDS
GAATGACATGCTGAAAGATA+AGG 0.550526 6_3:-19895924 Msa0943840:intron
TGCTCATGCATTGGGAAAGG+AGG 0.551665 6_3:+19895977 None:intergenic
TAATAAGAGGGCTACACTGA+AGG 0.581057 6_3:-19896226 Msa0943840:intron
ACGAAATCAATTAGCTAAGG+AGG 0.581875 6_3:-19896286 Msa0943840:CDS
TCATGCTCATGCATTGGGAA+AGG 0.590182 6_3:+19895974 None:intergenic
GTTTATTCGATGGGAGGCGT+CGG 0.591995 6_3:-19896876 Msa0943840:CDS
CCAACGAAATCAATTAGCTA+AGG 0.600046 6_3:-19896289 Msa0943840:CDS
GCTAGCAAAGTACGAACAGA+AGG 0.603167 6_3:-19895772 Msa0943840:CDS
AAAATGGTTTATTCGATGGG+AGG 0.608024 6_3:-19896882 Msa0943840:CDS
ATCTTGGTTCGATAATAAGA+GGG 0.641146 6_3:-19896238 Msa0943840:CDS
TTCGTACTTTGCTAGCAGGG+TGG 0.642156 6_3:+19895779 None:intergenic
CAAAGCAGACCACAATACAA+AGG 0.659814 6_3:-19896810 Msa0943840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACTTAGTTATTTTTTA+GGG + chr6_3:19896755-19896774 None:intergenic 10.0%
!!! AAAATACTTAGTTATTTTTT+AGG + chr6_3:19896756-19896775 None:intergenic 10.0%
!!! AAATACTTAGTTATTTTTTA+GGG + chr6_3:19896755-19896774 None:intergenic 10.0%
!!! AAAATACTTAGTTATTTTTT+AGG + chr6_3:19896756-19896775 None:intergenic 10.0%
!!! TCTTTTATTACTTGATTTAT+TGG - chr6_3:19895934-19895953 Msa0943840:CDS 15.0%
!!! TTATTTTGAATAAAGATTCA+TGG - chr6_3:19896261-19896280 Msa0943840:CDS 15.0%
!!! TCTTTTATTACTTGATTTAT+TGG - chr6_3:19895934-19895953 Msa0943840:CDS 15.0%
!!! TTATTTTGAATAAAGATTCA+TGG - chr6_3:19896261-19896280 Msa0943840:CDS 15.0%
!!! TATGTGTTGTTTCAATTTAT+TGG - chr6_3:19895910-19895929 Msa0943840:intron 20.0%
!!! TACTTGATTTATTGGTTTTA+TGG - chr6_3:19895942-19895961 Msa0943840:CDS 20.0%
!!! ACTTGATTTATTGGTTTTAT+GGG - chr6_3:19895943-19895962 Msa0943840:CDS 20.0%
!!! TATGTGTTGTTTCAATTTAT+TGG - chr6_3:19895910-19895929 Msa0943840:intron 20.0%
!!! TACTTGATTTATTGGTTTTA+TGG - chr6_3:19895942-19895961 Msa0943840:CDS 20.0%
!!! ACTTGATTTATTGGTTTTAT+GGG - chr6_3:19895943-19895962 Msa0943840:CDS 20.0%
! ATTGAAACAACACATACAAA+TGG + chr6_3:19895906-19895925 None:intergenic 25.0%
! TTTACTACCAAATTGATGTA+TGG + chr6_3:19895970-19895989 None:intergenic 25.0%
!!! TATATTTTAAACCACCAAAC+TGG - chr6_3:19896006-19896025 Msa0943840:CDS 25.0%
! GCTTAAGTAACAATAAATCA+TGG + chr6_3:19896184-19896203 None:intergenic 25.0%
!! GCTCAATCATATTTTCTTTT+TGG - chr6_3:19896202-19896221 Msa0943840:intron 25.0%
!! CAATCATATTTTCTTTTTGG+TGG - chr6_3:19896205-19896224 Msa0943840:intron 25.0%
!!! AACCAAGATTTGATTTGTTT+GGG + chr6_3:19896349-19896368 None:intergenic 25.0%
!!! TTTATTTTTTCAGATCGAGA+AGG - chr6_3:19896793-19896812 Msa0943840:CDS 25.0%
! ATTGAAACAACACATACAAA+TGG + chr6_3:19895906-19895925 None:intergenic 25.0%
! TTTACTACCAAATTGATGTA+TGG + chr6_3:19895970-19895989 None:intergenic 25.0%
!!! TATATTTTAAACCACCAAAC+TGG - chr6_3:19896006-19896025 Msa0943840:CDS 25.0%
! GCTTAAGTAACAATAAATCA+TGG + chr6_3:19896184-19896203 None:intergenic 25.0%
!! GCTCAATCATATTTTCTTTT+TGG - chr6_3:19896202-19896221 Msa0943840:intron 25.0%
!! CAATCATATTTTCTTTTTGG+TGG - chr6_3:19896205-19896224 Msa0943840:intron 25.0%
!!! AACCAAGATTTGATTTGTTT+GGG + chr6_3:19896349-19896368 None:intergenic 25.0%
!!! TTTATTTTTTCAGATCGAGA+AGG - chr6_3:19896793-19896812 Msa0943840:CDS 25.0%
CAATAAATCATGGCTTCAAA+GGG + chr6_3:19896174-19896193 None:intergenic 30.0%
ACAATAAATCATGGCTTCAA+AGG + chr6_3:19896175-19896194 None:intergenic 30.0%
TTTGAATAAAGATTCATGGC+AGG - chr6_3:19896265-19896284 Msa0943840:CDS 30.0%
TTGAATAAAGATTCATGGCA+GGG - chr6_3:19896266-19896285 Msa0943840:CDS 30.0%
! CTTAGCTAATTGATTTCGTT+GGG + chr6_3:19896311-19896330 None:intergenic 30.0%
!! GAACCAAGATTTGATTTGTT+TGG + chr6_3:19896350-19896369 None:intergenic 30.0%
! AATCTTGGTTCGATAATAAG+AGG - chr6_3:19896359-19896378 Msa0943840:intron 30.0%
! ATCTTGGTTCGATAATAAGA+GGG - chr6_3:19896360-19896379 Msa0943840:intron 30.0%
TTTCATGCAAAAGATGAGAA+TGG - chr6_3:19896650-19896669 Msa0943840:intron 30.0%
CAATAAATCATGGCTTCAAA+GGG + chr6_3:19896174-19896193 None:intergenic 30.0%
ACAATAAATCATGGCTTCAA+AGG + chr6_3:19896175-19896194 None:intergenic 30.0%
TTTGAATAAAGATTCATGGC+AGG - chr6_3:19896265-19896284 Msa0943840:CDS 30.0%
TTGAATAAAGATTCATGGCA+GGG - chr6_3:19896266-19896285 Msa0943840:CDS 30.0%
! CTTAGCTAATTGATTTCGTT+GGG + chr6_3:19896311-19896330 None:intergenic 30.0%
!! GAACCAAGATTTGATTTGTT+TGG + chr6_3:19896350-19896369 None:intergenic 30.0%
! AATCTTGGTTCGATAATAAG+AGG - chr6_3:19896359-19896378 Msa0943840:intron 30.0%
! ATCTTGGTTCGATAATAAGA+GGG - chr6_3:19896360-19896379 Msa0943840:intron 30.0%
TTTCATGCAAAAGATGAGAA+TGG - chr6_3:19896650-19896669 Msa0943840:intron 30.0%
! ATCTGAGACTGAGTTATCAA+TGG + chr6_3:19895765-19895784 None:intergenic 35.0%
CCACTAAAACCTTTGTATTG+TGG + chr6_3:19895800-19895819 None:intergenic 35.0%
!! CCACAATACAAAGGTTTTAG+TGG - chr6_3:19895797-19895816 Msa0943840:intron 35.0%
!!! ACTTTTGAAGTATGCTTCTC+TGG + chr6_3:19895826-19895845 None:intergenic 35.0%
TATGGGACCATACATCAATT+TGG - chr6_3:19895960-19895979 Msa0943840:CDS 35.0%
! TGTTATCGATTAGACCAGTT+TGG + chr6_3:19896023-19896042 None:intergenic 35.0%
! CCTTAGCTAATTGATTTCGT+TGG + chr6_3:19896312-19896331 None:intergenic 35.0%
CCAACGAAATCAATTAGCTA+AGG - chr6_3:19896309-19896328 Msa0943840:CDS 35.0%
ACGAAATCAATTAGCTAAGG+AGG - chr6_3:19896312-19896331 Msa0943840:CDS 35.0%
AATCAATTAGCTAAGGAGGT+TGG - chr6_3:19896316-19896335 Msa0943840:CDS 35.0%
ATCAATTAGCTAAGGAGGTT+GGG - chr6_3:19896317-19896336 Msa0943840:CDS 35.0%
AGCCCAAACAAATCAAATCT+TGG - chr6_3:19896344-19896363 Msa0943840:intron 35.0%
! ATGACATTTTGCGAAAGTTG+TGG - chr6_3:19896594-19896613 Msa0943840:intron 35.0%
! TGACATTTTGCGAAAGTTGT+GGG - chr6_3:19896595-19896614 Msa0943840:intron 35.0%
GAATGACATGCTGAAAGATA+AGG - chr6_3:19896674-19896693 Msa0943840:intron 35.0%
! ATCTGAGACTGAGTTATCAA+TGG + chr6_3:19895765-19895784 None:intergenic 35.0%
CCACTAAAACCTTTGTATTG+TGG + chr6_3:19895800-19895819 None:intergenic 35.0%
!! CCACAATACAAAGGTTTTAG+TGG - chr6_3:19895797-19895816 Msa0943840:intron 35.0%
!!! ACTTTTGAAGTATGCTTCTC+TGG + chr6_3:19895826-19895845 None:intergenic 35.0%
TATGGGACCATACATCAATT+TGG - chr6_3:19895960-19895979 Msa0943840:CDS 35.0%
! TGTTATCGATTAGACCAGTT+TGG + chr6_3:19896023-19896042 None:intergenic 35.0%
! CCTTAGCTAATTGATTTCGT+TGG + chr6_3:19896312-19896331 None:intergenic 35.0%
CCAACGAAATCAATTAGCTA+AGG - chr6_3:19896309-19896328 Msa0943840:CDS 35.0%
ACGAAATCAATTAGCTAAGG+AGG - chr6_3:19896312-19896331 Msa0943840:CDS 35.0%
AATCAATTAGCTAAGGAGGT+TGG - chr6_3:19896316-19896335 Msa0943840:CDS 35.0%
ATCAATTAGCTAAGGAGGTT+GGG - chr6_3:19896317-19896336 Msa0943840:CDS 35.0%
AGCCCAAACAAATCAAATCT+TGG - chr6_3:19896344-19896363 Msa0943840:intron 35.0%
! ATGACATTTTGCGAAAGTTG+TGG - chr6_3:19896594-19896613 Msa0943840:intron 35.0%
! TGACATTTTGCGAAAGTTGT+GGG - chr6_3:19896595-19896614 Msa0943840:intron 35.0%
GAATGACATGCTGAAAGATA+AGG - chr6_3:19896674-19896693 Msa0943840:intron 35.0%
CAAAGCAGACCACAATACAA+AGG - chr6_3:19895788-19895807 Msa0943840:CDS 40.0%
! TATCGATTAGACCAGTTTGG+TGG + chr6_3:19896020-19896039 None:intergenic 40.0%
AAATCATGGCTTCAAAGGGA+TGG + chr6_3:19896170-19896189 None:intergenic 40.0%
GATTTCGTTGGGCTTCATTT+GGG + chr6_3:19896300-19896319 None:intergenic 40.0%
TGATTTCGTTGGGCTTCATT+TGG + chr6_3:19896301-19896320 None:intergenic 40.0%
TAATAAGAGGGCTACACTGA+AGG - chr6_3:19896372-19896391 Msa0943840:intron 40.0%
! GACATTTTGCGAAAGTTGTG+GGG - chr6_3:19896596-19896615 Msa0943840:intron 40.0%
! ACATTTTGCGAAAGTTGTGG+GGG - chr6_3:19896597-19896616 Msa0943840:intron 40.0%
AACGTTCATGCTCATGCATT+GGG + chr6_3:19896632-19896651 None:intergenic 40.0%
AAACGTTCATGCTCATGCAT+TGG + chr6_3:19896633-19896652 None:intergenic 40.0%
CAAAGCAGACCACAATACAA+AGG - chr6_3:19895788-19895807 Msa0943840:CDS 40.0%
! TATCGATTAGACCAGTTTGG+TGG + chr6_3:19896020-19896039 None:intergenic 40.0%
AAATCATGGCTTCAAAGGGA+TGG + chr6_3:19896170-19896189 None:intergenic 40.0%
GATTTCGTTGGGCTTCATTT+GGG + chr6_3:19896300-19896319 None:intergenic 40.0%
TGATTTCGTTGGGCTTCATT+TGG + chr6_3:19896301-19896320 None:intergenic 40.0%
TAATAAGAGGGCTACACTGA+AGG - chr6_3:19896372-19896391 Msa0943840:intron 40.0%
! GACATTTTGCGAAAGTTGTG+GGG - chr6_3:19896596-19896615 Msa0943840:intron 40.0%
! ACATTTTGCGAAAGTTGTGG+GGG - chr6_3:19896597-19896616 Msa0943840:intron 40.0%
AACGTTCATGCTCATGCATT+GGG + chr6_3:19896632-19896651 None:intergenic 40.0%
AAACGTTCATGCTCATGCAT+TGG + chr6_3:19896633-19896652 None:intergenic 40.0%
TCATGCTCATGCATTGGGAA+AGG + chr6_3:19896627-19896646 None:intergenic 45.0%
CTGTTCGTACTTTGCTAGCA+GGG + chr6_3:19896825-19896844 None:intergenic 45.0%
TCTGTTCGTACTTTGCTAGC+AGG + chr6_3:19896826-19896845 None:intergenic 45.0%
GCTAGCAAAGTACGAACAGA+AGG - chr6_3:19896826-19896845 Msa0943840:CDS 45.0%
TCATGCTCATGCATTGGGAA+AGG + chr6_3:19896627-19896646 None:intergenic 45.0%
CTGTTCGTACTTTGCTAGCA+GGG + chr6_3:19896825-19896844 None:intergenic 45.0%
TCTGTTCGTACTTTGCTAGC+AGG + chr6_3:19896826-19896845 None:intergenic 45.0%
GCTAGCAAAGTACGAACAGA+AGG - chr6_3:19896826-19896845 Msa0943840:CDS 45.0%
! GTTTATTCGATGGGAGGCGT+CGG - chr6_3:19895722-19895741 Msa0943840:CDS 50.0%
TGCTCATGCATTGGGAAAGG+AGG + chr6_3:19896624-19896643 None:intergenic 50.0%
TTCGTACTTTGCTAGCAGGG+TGG + chr6_3:19896822-19896841 None:intergenic 50.0%
! GTTTATTCGATGGGAGGCGT+CGG - chr6_3:19895722-19895741 Msa0943840:CDS 50.0%
TGCTCATGCATTGGGAAAGG+AGG + chr6_3:19896624-19896643 None:intergenic 50.0%
TTCGTACTTTGCTAGCAGGG+TGG + chr6_3:19896822-19896841 None:intergenic 50.0%
!! TATTCGATGGGAGGCGTCGG+TGG - chr6_3:19895725-19895744 Msa0943840:CDS 60.0%
!! ATTCGATGGGAGGCGTCGGT+GGG - chr6_3:19895726-19895745 Msa0943840:CDS 60.0%
!! TATTCGATGGGAGGCGTCGG+TGG - chr6_3:19895725-19895744 Msa0943840:CDS 60.0%
!! ATTCGATGGGAGGCGTCGGT+GGG - chr6_3:19895726-19895745 Msa0943840:CDS 60.0%
!! ATGGGAGGCGTCGGTGGGTC+TGG - chr6_3:19895731-19895750 Msa0943840:CDS 70.0%
!! ATGGGAGGCGTCGGTGGGTC+TGG - chr6_3:19895731-19895750 Msa0943840:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 19895719 19896901 19895719 ID=Msa0943840;Name=Msa0943840
chr6_3 mRNA 19895719 19896901 19895719 ID=Msa0943840-mRNA-1;Parent=Msa0943840;Name=Msa0943840-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|176
chr6_3 exon 19896777 19896901 19896777 ID=Msa0943840-mRNA-1:exon:5993;Parent=Msa0943840-mRNA-1
chr6_3 exon 19896227 19896344 19896227 ID=Msa0943840-mRNA-1:exon:5992;Parent=Msa0943840-mRNA-1
chr6_3 exon 19895925 19896116 19895925 ID=Msa0943840-mRNA-1:exon:5991;Parent=Msa0943840-mRNA-1
chr6_3 exon 19895719 19895814 19895719 ID=Msa0943840-mRNA-1:exon:5990;Parent=Msa0943840-mRNA-1
chr6_3 CDS 19896777 19896901 19896777 ID=Msa0943840-mRNA-1:cds;Parent=Msa0943840-mRNA-1
chr6_3 CDS 19896227 19896344 19896227 ID=Msa0943840-mRNA-1:cds;Parent=Msa0943840-mRNA-1
chr6_3 CDS 19895925 19896116 19895925 ID=Msa0943840-mRNA-1:cds;Parent=Msa0943840-mRNA-1
chr6_3 CDS 19895719 19895814 19895719 ID=Msa0943840-mRNA-1:cds;Parent=Msa0943840-mRNA-1
Gene Sequence

>Msa0943840

ATGGTTTATTCGATGGGAGGCGTCGGTGGGTCTGGAGATAAAGCCATTGATAACTCAGTCTCAGATAATCAAAGCAGACCACAATACAAAGGTTTTAGTGGTTACCAGAGAAGCATACTTCAAAAATTCATGGCAGGGAACTCTAACCCAAATGAAGCCCAACGAAATCAATTAGCTAAGGAGGTTGGGCTTGAGCCCAAACAAATCAAATCTTGGTTCGATAATAAGAGGGCTACACTGAAGAAAAAACACATGAGAGAAGATAACAAAGCTCTTCATGCTGCAAGAAAAGAGCTCATTACTGAAAATATCGTTGTGAAAAAGATATTCAAGATGACATTTTGCGAAAGTTGTGGGGGTCCTCCTTTCCCAATGCATGAGCATGAACGTTTCATGCAAAAGATGAGAATGGAGAATGACATGCTGAAAGATAAGATCGAGAAGGTGTCCACCCTGCTAGCAAAGTACGAACAGAAGGAAATCTCACAGTTTGATTTTGAATACACTTTTGCTCGTTTAAATGCATTTTGA
Protein sequence

>Msa0943840

MVYSMGGVGGSGDKAIDNSVSDNQSRPQYKGFSGYQRSILQKFMAGNSNPNEAQRNQLAKEVGLEPKQIKSWFDNKRATLKKKHMREDNKALHAARKELITENIVVKKIFKMTFCESCGGPPFPMHEHERFMQKMRMENDMLKDKIEKVSTLLAKYEQKEISQFDFEYTFARLNAF*