AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0948930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0948930 MtrunA17_Chr6g0485301 67.658 269 43 4 825 1049 212 480 1.82e-104 338
Msa0948930 MtrunA17_Chr4g0030281 74.775 222 21 1 221 407 1 222 3.75e-101 335
Msa0948930 MtrunA17_Chr8g0390631 59.375 288 72 5 806 1049 186 472 2.68e-94 310
Msa0948930 MtrunA17_Chr8g0390651 52.923 325 104 8 769 1049 162 481 7.61e-87 290
Msa0948930 MtrunA17_Chr6g0469321 82.635 167 28 1 633 798 1 167 3.35e-80 260
Msa0948930 MtrunA17_Chr6g0485311 57.621 269 70 4 825 1049 210 478 9.07e-80 271
Msa0948930 MtrunA17_Chr7g0262111 70.213 188 52 2 535 718 192 379 1.41e-66 233
Msa0948930 MtrunA17_Chr3g0117861 42.379 269 111 5 825 1049 252 520 6.07e-53 195
Msa0948930 MtrunA17_Chr4g0059221 40.149 269 117 4 825 1049 254 522 4.89e-52 192
Msa0948930 MtrunA17_Chr8g0365221 39.552 268 118 6 825 1048 251 518 1.78e-51 191
Msa0948930 MtrunA17_Chr5g0394661 81.250 96 18 0 259 354 151 246 1.13e-43 171
Msa0948930 MtrunA17_Chr1g0154731 46.497 157 83 1 535 690 190 346 8.36e-35 140
Msa0948930 MtrunA17_Chr3g0118121 33.333 270 133 5 825 1048 204 472 2.42e-33 135
Msa0948930 MtrunA17_Chr4g0059521 31.852 270 137 6 825 1048 204 472 5.09e-32 132
Msa0948930 MtrunA17_Chr3g0118081 31.481 270 138 5 825 1048 234 502 5.18e-30 126
Msa0948930 MtrunA17_Chr1g0149841 82.143 84 15 0 702 785 208 291 5.04e-28 119
Msa0948930 MtrunA17_Chr1g0149841 70.732 41 12 0 781 821 409 449 6.36e-11 66.2
Msa0948930 MtrunA17_Chr2g0310091 31.022 274 148 6 813 1046 242 514 1.19e-26 115
Msa0948930 MtrunA17_Chr6g0479891 88.136 59 7 0 1046 1104 295 353 2.62e-24 109
Msa0948930 MtrunA17_Chr2g0313821 35.354 198 114 6 534 718 190 386 5.02e-24 107
Msa0948930 MtrunA17_Chr7g0249681 69.333 75 20 1 186 260 276 347 7.76e-24 109
Msa0948930 MtrunA17_Chr4g0063221 35.542 166 95 3 535 690 195 358 1.04e-23 107
Msa0948930 MtrunA17_Chr2g0313801 35.928 167 97 4 534 690 190 356 2.50e-22 102
Msa0948930 MtrunA17_Chr3g0137101 68.919 74 22 1 702 775 215 287 2.63e-22 103
Msa0948930 MtrunA17_Chr7g0235261 39.130 161 89 4 536 690 193 350 2.78e-22 102
Msa0948930 MtrunA17_Chr2g0313781 36.527 167 96 5 534 690 202 368 6.47e-22 101
Msa0948930 MtrunA17_Chr1g0193811 36.810 163 96 4 534 690 195 356 6.49e-22 101
Msa0948930 MtrunA17_Chr8g0362731 36.905 168 97 4 536 697 91 255 7.08e-22 99.8
Msa0948930 MtrunA17_Chr2g0313811 35.928 167 97 5 534 690 202 368 7.52e-22 101
Msa0948930 MtrunA17_Chr4g0004601 39.506 162 87 5 535 690 215 371 1.33e-21 100
Msa0948930 MtrunA17_Chr2g0313751 33.533 167 101 2 534 690 217 383 4.93e-21 98.6
Msa0948930 MtrunA17_Chr2g0313791 32.335 167 103 3 534 690 185 351 4.10e-20 95.5
Msa0948930 MtrunA17_Chr2g0313761 35.329 167 98 4 534 690 185 351 4.86e-20 95.5
Msa0948930 MtrunA17_Chr5g0446131 32.335 167 103 3 534 690 188 354 7.49e-20 94.7
Msa0948930 MtrunA17_Chr5g0433851 87.500 48 6 0 360 407 211 258 7.83e-20 93.6
Msa0948930 MtrunA17_Chr2g0313831 35.329 167 98 5 534 690 190 356 1.43e-19 94.0
Msa0948930 MtrunA17_Chr8g0336361 34.356 163 96 4 536 690 202 361 6.44e-19 92.0
Msa0948930 MtrunA17_Chr1g0203141 32.164 171 111 5 523 689 185 354 5.38e-17 85.9
Msa0948930 MtrunA17_Chr6g0457421 31.646 158 105 2 536 690 194 351 9.72e-17 84.7
Msa0948930 MtrunA17_Chr1g0149831 78.125 64 11 1 702 765 145 205 1.97e-16 80.1
Msa0948930 MtrunA17_Chr2g0313771 31.737 167 101 6 535 690 199 363 2.07e-16 84.0
Msa0948930 MtrunA17_Chr2g0288661 29.121 182 115 3 523 690 177 358 3.75e-16 83.2
Msa0948930 MtrunA17_Chr1g0165151 40.698 86 51 0 78 163 27 112 8.64e-16 75.1
Msa0948930 MtrunA17_Chr7g0215181 29.469 207 130 5 536 735 195 392 1.01e-15 81.6
Msa0948930 MtrunA17_Chr3g0084281 32.353 136 82 2 78 213 67 192 1.79e-15 81.6
Msa0948930 MtrunA17_Chr8g0354511 29.341 167 107 3 534 690 199 364 3.43e-15 80.1
Msa0948930 MtrunA17_Chr1g0203151 32.911 158 101 5 536 689 194 350 3.82e-15 79.7
Msa0948930 MtrunA17_Chr6g0479681 30.994 171 113 5 523 689 183 352 4.62e-15 79.7
Msa0948930 MtrunA17_Chr2g0307301 30.539 167 106 5 534 690 192 358 1.29e-14 78.2
Msa0948930 MtrunA17_Chr7g0226861 32.353 136 82 2 78 213 67 192 1.47e-14 78.6
Msa0948930 MtrunA17_Chr8g0354571 28.643 199 127 6 534 719 199 395 1.53e-14 78.2
Msa0948930 MtrunA17_Chr2g0307291 31.138 167 105 5 534 690 192 358 2.16e-14 77.4
Msa0948930 MtrunA17_Chr3g0082901 32.743 113 69 1 81 193 71 176 5.47e-14 76.3
Msa0948930 MtrunA17_Chr4g0014051 31.959 194 120 7 536 718 206 398 2.61e-13 73.9
Msa0948930 MtrunA17_Chr1g0161431 35.659 129 77 4 702 829 217 340 3.84e-13 73.9
Msa0948930 MtrunA17_Chr2g0294911 48.750 80 40 1 702 780 228 307 6.08e-13 73.2
Msa0948930 MtrunA17_Chr7g0275891 49.485 97 30 3 702 785 208 298 6.86e-13 71.6
Msa0948930 MtrunA17_Chr4g0067981 55.128 78 30 2 702 777 232 306 1.80e-12 71.6
Msa0948930 MtrunA17_Chr6g0472221 29.167 168 112 4 528 689 199 365 3.26e-12 70.5
Msa0948930 MtrunA17_Chr6g0472161 29.070 172 116 5 523 689 181 351 3.79e-12 69.7
Msa0948930 MtrunA17_Chr2g0308651 30.636 173 98 6 536 689 82 251 4.47e-11 66.6
Msa0948930 MtrunA17_Chr2g0304841 46.512 86 34 3 682 767 218 291 7.59e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0948930 AT3G24503.1 48.958 288 102 5 806 1049 193 479 3.36e-73 253
Msa0948930 AT3G48000.1 42.066 271 113 5 823 1049 246 516 1.40e-55 203
Msa0948930 AT1G23800.1 40.892 269 115 6 825 1049 244 512 2.37e-51 190
Msa0948930 AT1G75130.1 48.077 156 80 1 535 689 190 345 1.31e-40 158
Msa0948930 AT3G48170.1 33.333 270 133 6 825 1048 204 472 1.52e-33 137
Msa0948930 AT1G74920.2 31.852 270 137 5 825 1048 199 467 3.05e-32 132
Msa0948930 AT1G74920.1 31.852 270 137 5 825 1048 204 472 3.85e-32 132
Msa0948930 AT1G23800.2 46.341 164 73 5 825 976 244 404 3.91e-32 130
Msa0948930 AT2G26710.1 40.361 166 82 3 535 690 196 354 2.34e-28 121
Msa0948930 AT3G14640.1 39.157 166 88 6 534 690 193 354 4.68e-23 105
Msa0948930 AT3G14640.2 35.714 196 111 7 534 718 215 406 5.87e-23 105
Msa0948930 AT1G79440.1 30.943 265 138 6 826 1046 242 505 1.26e-22 103
Msa0948930 AT3G14690.1 32.821 195 117 5 534 718 192 382 2.10e-22 103
Msa0948930 AT3G14690.2 32.821 195 117 5 534 718 227 417 2.29e-22 103
Msa0948930 AT2G46950.2 36.364 154 96 2 539 690 256 409 2.66e-22 102
Msa0948930 AT2G46950.1 31.336 217 135 4 539 753 256 460 3.20e-22 103
Msa0948930 AT2G46960.1 35.032 157 99 3 535 689 83 238 3.52e-22 100
Msa0948930 AT2G46960.2 35.032 157 99 3 535 689 199 354 1.06e-21 100
Msa0948930 AT3G14620.1 33.548 155 102 1 536 689 198 352 1.87e-21 100
Msa0948930 AT3G14660.2 31.282 195 120 5 534 718 46 236 2.06e-21 98.2
Msa0948930 AT3G14650.1 32.308 195 118 5 534 718 192 382 8.83e-21 98.2
Msa0948930 AT3G14660.1 31.282 195 120 5 534 718 192 382 1.29e-20 97.4
Msa0948930 AT3G14630.1 32.292 192 122 4 534 718 188 378 1.39e-20 97.4
Msa0948930 AT3G14680.1 30.729 192 125 4 534 718 192 382 1.40e-20 97.4
Msa0948930 AT4G27710.2 35.802 162 96 4 535 690 197 356 1.68e-20 95.5
Msa0948930 AT4G27710.1 27.719 285 187 5 535 815 197 466 1.96e-20 97.1
Msa0948930 AT3G14630.2 32.292 192 122 4 534 718 243 433 2.37e-20 97.1
Msa0948930 AT3G14660.3 33.333 165 98 4 534 690 192 352 2.41e-20 95.5
Msa0948930 AT3G17770.1 76.271 59 14 0 1048 1106 297 355 5.03e-20 96.3
Msa0948930 AT1G48430.2 74.576 59 15 0 1048 1106 297 355 5.29e-20 95.9
Msa0948930 AT1G48430.1 74.576 59 15 0 1048 1106 297 355 6.15e-20 95.9
Msa0948930 AT3G14610.1 32.749 171 107 4 525 690 184 351 3.74e-19 92.8
Msa0948930 AT3G16857.3 56.250 64 28 0 702 765 184 247 4.85e-14 77.0
Msa0948930 AT3G16857.2 56.250 64 28 0 702 765 254 317 6.12e-14 77.0
Msa0948930 AT3G16857.1 56.250 64 28 0 702 765 254 317 6.38e-14 77.0
Msa0948930 AT2G25180.1 67.925 53 17 0 702 754 212 264 6.65e-13 73.6
Msa0948930 AT5G58080.1 53.030 66 29 1 702 767 211 274 9.37e-12 69.7

Find 247 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATCCTACACTTTA+TGG 0.145851 6_3:+34054751 Msa0948930:CDS
GAGAACCAATTCCGGTTATT+AGG 0.172098 6_3:+34054014 Msa0948930:CDS
CCATTCGAACAGGAGTTATT+TGG 0.188302 6_3:+34057081 Msa0948930:CDS
GGTTGCTCCTTGCAAAATAA+TGG 0.220426 6_3:+34054571 Msa0948930:CDS
ATCTTAACCTGCTTGCTTTC+CGG 0.240960 6_3:-34054196 Msa0948920:intron
TGAGGACCTTGTTGAACTTT+AGG 0.247900 6_3:-34056782 Msa0948920:intron
AAACCAGCTTCACTTGAATT+AGG 0.247929 6_3:+34056560 Msa0948930:CDS
ATTTATGACTTCTCTTGATA+TGG 0.249088 6_3:+34057211 Msa0948930:CDS
CATTTCACTCAATGGGATTC+AGG 0.252979 6_3:+34057461 Msa0948930:CDS
GGTGGTCTCTTGTTCATTAA+AGG 0.255998 6_3:+34057486 Msa0948930:CDS
AATTAACATATTAGCAGAAT+TGG 0.258385 6_3:-34054944 Msa0948920:intron
TTAGGTAGAGTCTATACTTT+TGG 0.259554 6_3:-34056160 Msa0948920:intron
CTGAAACTAAAACTCCTTAT+TGG 0.266183 6_3:+34057291 Msa0948930:CDS
TATTAACCGTGCTGCTATTA+AGG 0.266903 6_3:+34056388 Msa0948930:CDS
TCTTAACCTGCTTGCTTTCC+GGG 0.267579 6_3:-34054195 Msa0948920:intron
CAAGGAATTGCATGTAGATT+TGG 0.268284 6_3:+34057379 Msa0948930:CDS
AGTAACTGTGACAAAGAATT+TGG 0.283055 6_3:+34057034 Msa0948930:CDS
ACTGGTAAGATTAGCTTTAC+TGG 0.292785 6_3:+34056491 Msa0948930:CDS
GTCTCTATTATTGTTGTTGT+TGG 0.293062 6_3:-34053975 Msa0948920:intron
TGGTTGCGACACATTCTTTA+GGG 0.293767 6_3:-34055107 Msa0948920:intron
GAAAAGAGGGTTAATCAATT+AGG 0.296536 6_3:+34056056 Msa0948930:CDS
ACAGAAGGTGCAATGGTATT+TGG 0.304024 6_3:+34056315 Msa0948930:CDS
TGTTGTTGGCGATGTTATTC+AGG 0.314072 6_3:-34053952 Msa0948920:intron
CAAACCGAGAACGATGTAAT+TGG 0.321464 6_3:+34054550 Msa0948930:CDS
GCCAGGCTTCTTGCTGGCCA+TGG 0.327168 6_3:+34055466 Msa0948930:CDS
TTGGTTGCGACACATTCTTT+AGG 0.328802 6_3:-34055108 Msa0948920:intron
TATTGGCCTGTTGGAGTTAG+TGG 0.331545 6_3:+34057308 Msa0948930:CDS
CAAAATAATGGGAAGCATAT+TGG 0.332457 6_3:+34054583 Msa0948930:CDS
TGTACAACCTTTAATGAAAC+TGG 0.338472 6_3:+34055077 Msa0948930:CDS
ATTAATTGCTACTTTGCCTT+TGG 0.339812 6_3:+34057104 Msa0948930:CDS
TACCCCGGCCCTTAATGCTT+TGG 0.342907 6_3:+34053901 Msa0948930:CDS
AATAGCTAAATCCAGGGATA+TGG 0.347520 6_3:-34055713 Msa0948920:intron
TTTGGAAATGACATTCTCTA+TGG 0.347796 6_3:+34057122 Msa0948930:CDS
TCCTTCTCCAAGTTCGAATA+GGG 0.349178 6_3:-34054297 Msa0948920:intron
CATCCGGCCAGGCTTCTTGC+TGG 0.350968 6_3:+34055460 Msa0948930:CDS
TGGAATATTGTTTGTTATAG+AGG 0.356244 6_3:+34055495 Msa0948930:CDS
CGAACCCTAATAACCGGAAT+TGG 0.360144 6_3:-34054019 Msa0948920:intron
TTCAACAAGACGTGAAATAA+TGG 0.361036 6_3:+34056514 Msa0948930:CDS
TCCAACTCCACTTCTTAAAT+AGG 0.361147 6_3:-34056252 Msa0948920:intron
ATTGTTGTTGTTGGTGTTGT+TGG 0.365619 6_3:-34053966 Msa0948920:intron
AAGGGAGAAATTTGTGTTGC+GGG 0.367098 6_3:+34056665 Msa0948930:CDS
AGAACCAATTCCGGTTATTA+GGG 0.369041 6_3:+34054015 Msa0948930:CDS
CTAACTCCAACAGGCCAATA+AGG 0.369531 6_3:-34057305 Msa0948920:intron
TGATGAGGATAACACACTTT+TGG 0.374598 6_3:+34054774 Msa0948930:CDS
ATCCTTCTCCAAGTTCGAAT+AGG 0.376656 6_3:-34054298 Msa0948920:intron
GAATGTAAAACCTACTTTGC+TGG 0.377877 6_3:+34055921 Msa0948930:CDS
GTATGTTGAATTATGAAAAT+CGG 0.382527 6_3:-34054485 Msa0948920:intron
AATAACAATCAGACTATTGA+TGG 0.390737 6_3:+34054043 Msa0948930:CDS
ATTAACATATTAGCAGAATT+GGG 0.391197 6_3:-34054943 Msa0948920:intron
GGAAGATAAGTGTTTGTTCC+AGG 0.392171 6_3:-34056356 Msa0948920:intron
TAATGCTTTGGCTGCACAAA+TGG 0.392894 6_3:+34053913 Msa0948930:CDS
ATTCCTTGCTGAAGTTGTAT+AGG 0.394035 6_3:-34055012 Msa0948920:intron
GAAGAAGTGCCAAAGTTAAC+AGG 0.394527 6_3:-34055962 Msa0948920:intron
GTTGCTCCTTGCAAAATAAT+GGG 0.395260 6_3:+34054572 Msa0948930:CDS
TTCGATGTAGTACCTGGATT+TGG 0.399971 6_3:+34056455 Msa0948930:CDS
CCCATGGCCAGCAAGAAGCC+TGG 0.405024 6_3:-34055467 Msa0948920:intron
GGGTCTGGTGGTGGCGGAGA+GGG 0.405348 6_3:-34055201 Msa0948920:intron
TTGTGCAGCCAAAGCATTAA+GGG 0.405750 6_3:-34053909 Msa0948920:intron
TATTAGCAAAATATCAAGAT+TGG 0.406502 6_3:+34055985 Msa0948930:CDS
TTCAAACAATCATCGTTGTC+TGG 0.414533 6_3:-34055225 Msa0948920:intron
TTCAACATACTTGTTATCAA+TGG 0.415765 6_3:+34054498 Msa0948930:CDS
TTTGTGCAGCCAAAGCATTA+AGG 0.415858 6_3:-34053910 Msa0948920:intron
CCAGGCTTCTTGCTGGCCAT+GGG 0.416133 6_3:+34055467 Msa0948930:CDS
TGAATTTGAGAAGAAGTTAG+TGG 0.419217 6_3:+34056721 Msa0948930:CDS
TTCTTCTGCTGCTACCTCCT+TGG 0.422392 6_3:-34055127 Msa0948920:intron
GGTTACAAGATGAGTGGGTT+TGG 0.425453 6_3:+34057146 Msa0948930:CDS
ATGTAGATTTGGTTCACTTC+AGG 0.425636 6_3:+34057390 Msa0948930:CDS
TGGGTCTGGTGGTGGCGGAG+AGG 0.429189 6_3:-34055202 Msa0948920:intron
GTGAAAGTTCAGACTGTGAT+TGG 0.429225 6_3:+34054908 Msa0948930:CDS
ACAGCCTCTGCTTTCGTCAC+CGG 0.431397 6_3:-34053869 Msa0948920:intron
CGGATTTGTTTGTTGATTTG+CGG 0.431960 6_3:-34055271 Msa0948920:intron
GCACATACATTTCACTCAAT+GGG 0.433148 6_3:+34057454 Msa0948930:CDS
GTTGTGAATGAATCTTTCTT+CGG 0.435110 6_3:-34055291 Msa0948920:intron
TTATTACGAACCCTAATAAC+CGG 0.438088 6_3:-34054025 Msa0948920:intron
CCTCCTAATTCAAGTGAAGC+TGG 0.438912 6_3:-34056563 Msa0948920:intron
AACATCTAACCTGTTAACTT+TGG 0.439400 6_3:+34055953 Msa0948930:CDS
CAGCCAAAGCATTAAGGGCC+GGG 0.439980 6_3:-34053904 Msa0948920:intron
CATTCATCAATAATTTCATC+CGG 0.442926 6_3:-34055903 Msa0948920:intron
AGCACATACATTTCACTCAA+TGG 0.443869 6_3:+34057453 Msa0948930:CDS
TTGTCTGGTGGGTCTGGTGG+TGG 0.444717 6_3:-34055210 Msa0948920:intron
TCATCGTTGTCTGGTGGGTC+TGG 0.445440 6_3:-34055216 Msa0948920:intron
TGCATCTGAACTACTAGTTA+AGG 0.446478 6_3:-34056228 Msa0948920:intron
TGTTGAACTTTAGGATCAAA+AGG 0.452062 6_3:-34056773 Msa0948920:intron
TCTGGTGGGTCTGGTGGTGG+CGG 0.452363 6_3:-34055207 Msa0948920:intron
ATAATAGAGACAATTTGAAT+AGG 0.452795 6_3:+34053987 Msa0948930:CDS
GTTGACAAATAGCTAAATCC+AGG 0.454203 6_3:-34055720 Msa0948920:intron
ATCAGCCATGGGAGATCAAC+CGG 0.454320 6_3:+34053850 None:intergenic
GCAACCAATTACATCGTTCT+CGG 0.457742 6_3:-34054554 Msa0948920:intron
TGAAAAGTACCGCATCTGTT+TGG 0.460298 6_3:+34054233 Msa0948930:CDS
AGTGGGTTTGGAAGAGATTG+TGG 0.461016 6_3:+34057158 Msa0948930:CDS
CAGCCTTTACGCGGTAATCA+TGG 0.463588 6_3:-34054084 Msa0948920:intron
CGATTACCACTAACTCCAAC+AGG 0.467093 6_3:-34057314 Msa0948920:intron
AGTGTCAACAATAAAAGATA+TGG 0.467971 6_3:+34057002 Msa0948930:CDS
TAGGAGAGGAGAACCAATTC+CGG 0.476234 6_3:+34054006 Msa0948930:CDS
GAGGCTGAGTTGCATATTCA+AGG 0.480186 6_3:+34054862 Msa0948930:CDS
GGAAAACAAACAAGGTCATA+TGG 0.480991 6_3:+34056199 Msa0948930:CDS
TTTATCAATTTCTATCATGA+AGG 0.481455 6_3:+34057238 Msa0948930:CDS
GTCGATTTCCTTCCTAGTGA+TGG 0.481687 6_3:+34055431 Msa0948930:CDS
CAACTAAGAAGAACAAAGAT+AGG 0.482446 6_3:+34055739 Msa0948930:CDS
GCACGGTTAATAGATTCTCT+TGG 0.482574 6_3:-34056377 Msa0948920:intron
CAACTCAGCCTCAACTGAAT+CGG 0.484787 6_3:-34054851 Msa0948920:intron
CCAAATAACTCCTGTTCGAA+TGG 0.486479 6_3:-34057081 Msa0948920:intron
GAAAGAACCCTATTCGAACT+TGG 0.486536 6_3:+34054290 Msa0948930:CDS
CGTCACCGGTTGATCTCCCA+TGG 0.488214 6_3:-34053855 Msa0948920:intron
TTGTACATCATGAATTGAAC+CGG 0.489346 6_3:-34055061 Msa0948920:intron
AAAACTCCTTATTGGCCTGT+TGG 0.493692 6_3:+34057299 Msa0948930:CDS
CTTCCTCGAATTTAGATGAC+TGG 0.495477 6_3:-34055350 Msa0948920:intron
ACTATTGATGGCGATGGATG+TGG 0.495689 6_3:+34054055 Msa0948930:CDS
CATTAGCATCGTATTTAACA+AGG 0.497087 6_3:+34056646 Msa0948930:CDS
GTCGGAAGTGTCCATATCCC+TGG 0.499515 6_3:+34055702 Msa0948930:CDS
GATGCATCCTATTTAAGAAG+TGG 0.500111 6_3:+34056245 Msa0948930:CDS
TGGCCAGCAAGAAGCCTGGC+CGG 0.502144 6_3:-34055463 Msa0948920:intron
GTATCAAGGTCCATTCGAAC+AGG 0.502385 6_3:+34057071 Msa0948930:CDS
AAAGCAAGAGCTTGGGCTGT+TGG 0.506234 6_3:+34056746 Msa0948930:CDS
AACAATCATCGTTGTCTGGT+GGG 0.512866 6_3:-34055221 Msa0948920:intron
CTAGAGAAGCAATTGAAAAG+AGG 0.512949 6_3:+34056042 Msa0948930:CDS
CCTGCAGTTGCACCAAATCC+AGG 0.513945 6_3:-34056467 Msa0948920:intron
GGCTGTCGCGGCTCTTACCC+CGG 0.515218 6_3:+34053886 Msa0948930:CDS
GGAGTATTCGATGTAGTACC+TGG 0.515308 6_3:+34056449 Msa0948930:CDS
TTTCGTGTGTTTGTTCAAGA+AGG 0.516942 6_3:+34056689 Msa0948930:CDS
TTTCTGCAGATGTTATATCA+AGG 0.517188 6_3:+34055598 Msa0948930:CDS
TCCTATTTAAGAAGTGGAGT+TGG 0.517242 6_3:+34056251 Msa0948930:CDS
GCAGCCAAAGCATTAAGGGC+CGG 0.518379 6_3:-34053905 Msa0948920:intron
TGATTGTTTGAAAGAAGATA+AGG 0.519033 6_3:+34055236 Msa0948930:CDS
TGTTCGAATGGACCTTGATA+CGG 0.520311 6_3:-34057069 Msa0948920:intron
GATGGAGTGTCCATCCGGCC+AGG 0.521277 6_3:+34055449 Msa0948930:CDS
TTACCAGTCATCTAAATTCG+AGG 0.521754 6_3:+34055347 Msa0948930:CDS
CATGAAGTTCAATACTATTG+AGG 0.522086 6_3:+34056968 Msa0948930:CDS
AGTTTCTACAAGAATGAAGT+TGG 0.522151 6_3:+34055861 Msa0948930:CDS
TTTGGTGCAACTGCAGGAAC+TGG 0.523481 6_3:+34056473 Msa0948930:CDS
TCAGATAATTGTGGTAGTCC+TGG 0.523806 6_3:+34054730 Msa0948930:intron
CTAGTGATGGAGTGTCCATC+CGG 0.524370 6_3:+34055444 Msa0948930:CDS
GATGTATCGACCGCCGGTGA+AGG 0.525820 6_3:+34054423 Msa0948930:CDS
ATAACATCTGCAGAAAGATC+AGG 0.525890 6_3:-34055591 Msa0948920:intron
TAAAGTTCAACAAGGTCCTC+AGG 0.526739 6_3:+34056784 Msa0948930:CDS
CTTGCTGGCCATGGGTGCCG+TGG 0.529511 6_3:+34055475 Msa0948930:CDS
TTGTTATAGAGGTGTATTGA+AGG 0.529797 6_3:+34055506 Msa0948930:CDS
ATCTGAAATTCCAGTCGGTA+TGG 0.531082 6_3:-34056426 Msa0948920:intron
TAGTGGACAAAGCAAGAGCT+TGG 0.531745 6_3:+34056738 Msa0948930:CDS
CCTGGATTTGGTGCAACTGC+AGG 0.534107 6_3:+34056467 Msa0948930:CDS
ATGACTTCTCTTGATATGGA+AGG 0.538051 6_3:+34057215 Msa0948930:CDS
CTACTTTACTTGAAAACAGA+AGG 0.542032 6_3:+34056300 Msa0948930:CDS
AGTGGACAAAGCAAGAGCTT+GGG 0.542455 6_3:+34056739 Msa0948930:CDS
CCAGCTTCACTTGAATTAGG+AGG 0.544210 6_3:+34056563 Msa0948930:CDS
CAGCAAGAAGCCTGGCCGGA+TGG 0.546158 6_3:-34055459 Msa0948920:intron
AAAGTACCGCATCTGTTTGG+TGG 0.547985 6_3:+34054236 Msa0948930:CDS
TCAGTATATCCACCCTTCAC+CGG 0.549465 6_3:-34054436 Msa0948920:intron
TTTCGACGTCATGGACGTCC+CGG 0.550444 6_3:+34054177 Msa0948930:CDS
GCGTACAACACAACTTGTCA+TGG 0.552039 6_3:+34056941 Msa0948930:CDS
AATCAGACTATTGATGGCGA+TGG 0.554170 6_3:+34054049 Msa0948930:CDS
AAACAATCATCGTTGTCTGG+TGG 0.555022 6_3:-34055222 Msa0948920:intron
ATATAGCAAGCACCGTATCA+AGG 0.555289 6_3:+34057057 Msa0948930:CDS
GGAAATGACATTCTCTATGG+AGG 0.556285 6_3:+34057125 Msa0948930:CDS
TCAAGCACAATGCAACTACC+TGG 0.556515 6_3:+34056338 Msa0948930:CDS
TCACCATGATTACCGCGTAA+AGG 0.556926 6_3:+34054081 Msa0948930:CDS
TAGAGAAGCAATTGAAAAGA+GGG 0.557169 6_3:+34056043 Msa0948930:CDS
GGACGTCCCGGAAAGCAAGC+AGG 0.557424 6_3:+34054189 Msa0948930:CDS
GGAGTCTATATTCTGATCAA+AGG 0.559464 6_3:+34057411 Msa0948930:CDS
CTTGAAAACAGAAGGTGCAA+TGG 0.560167 6_3:+34056308 Msa0948930:CDS
GTTTGGAAGAGATTGTGGAT+TGG 0.563201 6_3:+34057163 Msa0948930:CDS
CGGATGGACACTCCATCACT+AGG 0.563561 6_3:-34055443 Msa0948920:intron
ATGTATCGACCGCCGGTGAA+GGG 0.564435 6_3:+34054424 Msa0948930:CDS
CAAATAGATGAACTGAATGC+CGG 0.567205 6_3:+34055042 Msa0948930:CDS
ATGGAGGTTACAAGATGAGT+GGG 0.567343 6_3:+34057141 Msa0948930:CDS
ACAAGTCTGATCAATCGAAA+GGG 0.569603 6_3:+34054886 Msa0948930:CDS
AGAGACAATTTGAATAGGAG+AGG 0.569925 6_3:+34053992 Msa0948930:CDS
TGAAAGTTCAGACTGTGATT+GGG 0.569942 6_3:+34054909 Msa0948930:CDS
GTGAAATGTATGTGCTTGAC+GGG 0.570574 6_3:-34057446 Msa0948920:intron
ACGCATGGCCTCCTTAACAT+TGG 0.573171 6_3:-34056922 Msa0948920:intron
AATGTATGTGCTTGACGGGT+GGG 0.575116 6_3:-34057442 Msa0948920:intron
CAAGGGAGAAATTTGTGTTG+CGG 0.575569 6_3:+34056664 Msa0948930:CDS
CAGCCGTCACATTGAACTCA+AGG 0.575592 6_3:+34057361 Msa0948930:CDS
ACAATATTCCACGGCACCCA+TGG 0.576044 6_3:-34055483 Msa0948920:intron
TGGCGAAGATAGACTACAGC+CGG 0.576980 6_3:+34055884 Msa0948930:CDS
TTCTACAAGAATGAAGTTGG+TGG 0.580536 6_3:+34055864 Msa0948930:CDS
AACAAGTCTGATCAATCGAA+AGG 0.582103 6_3:+34054885 Msa0948930:CDS
AGCCAAAGCATTAAGGGCCG+GGG 0.582253 6_3:-34053903 Msa0948920:intron
AAGTACCGCATCTGTTTGGT+GGG 0.583147 6_3:+34054237 Msa0948930:CDS
TATCGACCGCCGGTGAAGGG+TGG 0.583258 6_3:+34054427 Msa0948930:CDS
ACCCTATTCGAACTTGGAGA+AGG 0.585464 6_3:+34054296 Msa0948930:CDS
ATGTATGTGCTTGACGGGTG+GGG 0.591408 6_3:-34057441 Msa0948920:intron
ATAGAGAATGTCATTTCCAA+AGG 0.592177 6_3:-34057120 Msa0948920:intron
TGGTGTAGATTTGCATCATG+AGG 0.595637 6_3:+34054603 Msa0948930:CDS
ATTGAAGGTTGATTTAATTG+CGG 0.596649 6_3:+34055521 Msa0948930:CDS
GACGAAAGCAGAGGCTGTCG+CGG 0.596971 6_3:+34053874 Msa0948930:CDS
TCCATCGTTCCGTAAAACAA+TGG 0.599510 6_3:-34054112 Msa0948920:intron
ATACCGACTGGAATTTCAGA+TGG 0.601373 6_3:+34056428 Msa0948930:CDS
TCTAATCGTTGAAGAATAGA+CGG 0.601987 6_3:-34057266 Msa0948920:intron
TTCACTCAATGGGATTCAGG+AGG 0.602150 6_3:+34057464 Msa0948930:CDS
GACAAGTTGTGTTGTACGCA+TGG 0.603255 6_3:-34056937 Msa0948920:intron
TCCTACACTTTATGGTGATG+AGG 0.603546 6_3:+34054759 Msa0948930:CDS
AAGACACATGAAGAAACTGA+TGG 0.603880 6_3:+34056014 Msa0948930:CDS
TATCAGATGATGCATATGCT+CGG 0.604184 6_3:+34054815 Msa0948930:CDS
TAAAGAATGTGTCGCAACCA+AGG 0.604764 6_3:+34055110 Msa0948930:CDS
GGAAGCAACTCTCGTCGCCA+CGG 0.605858 6_3:+34054401 Msa0948930:CDS
TCTAAATTCGAGGAAGTGCA+AGG 0.610205 6_3:+34055357 Msa0948930:CDS
TCGTTGTCTGGTGGGTCTGG+TGG 0.611233 6_3:-34055213 Msa0948920:intron
GCAAACTGATTGAAACCAAG+AGG 0.611708 6_3:+34055796 Msa0948930:CDS
TATGGAGGTTACAAGATGAG+TGG 0.613797 6_3:+34057140 Msa0948930:CDS
TCGTTAAAGACCATACCGAC+TGG 0.616385 6_3:+34056416 Msa0948930:CDS
TCACTCAATGGGATTCAGGA+GGG 0.616822 6_3:+34057465 Msa0948930:CDS
TTATATATCCGATTCAGTTG+AGG 0.617814 6_3:+34054843 Msa0948930:CDS
GATGATGCATATGCTCGGAA+AGG 0.619514 6_3:+34054820 Msa0948930:CDS
CTCAATGGGATTCAGGAGGG+TGG 0.621907 6_3:+34057468 Msa0948930:CDS
TGGACACTCCATCACTAGGA+AGG 0.625199 6_3:-34055439 Msa0948920:intron
CTAAGAAGAACAAAGATAGG+TGG 0.625403 6_3:+34055742 Msa0948930:CDS
CTATTGATGGCGATGGATGT+GGG 0.626671 6_3:+34054056 Msa0948930:CDS
CTATAACAAACAATATTCCA+CGG 0.628635 6_3:-34055492 Msa0948920:intron
GGCGAACTTAGCGAAACTGC+AGG 0.631047 6_3:-34055405 Msa0948920:intron
GCCACGGATGTATCGACCGC+CGG 0.632329 6_3:+34054417 Msa0948930:CDS
TGTTGATTTGCGGTAGCAAG+TGG 0.632722 6_3:-34055261 Msa0948920:intron
CATGAAAGATTTAACTCTCG+CGG 0.633915 6_3:+34054334 Msa0948930:CDS
AGTGAAATGTATGTGCTTGA+CGG 0.634892 6_3:-34057447 Msa0948920:intron
AAATGTATGTGCTTGACGGG+TGG 0.637034 6_3:-34057443 Msa0948920:intron
TGCTTGGCATCAGATAATTG+TGG 0.638188 6_3:+34054721 Msa0948930:intron
AGACACATGAAGAAACTGAT+GGG 0.638860 6_3:+34056015 Msa0948930:CDS
ATTAGCATCGTATTTAACAA+GGG 0.639693 6_3:+34056647 Msa0948930:CDS
GGAGAGGGAACTGAGTCCGA+TGG 0.642062 6_3:-34055186 Msa0948920:intron
ATTCCTTGAGTTCAATGTGA+CGG 0.642305 6_3:-34057364 Msa0948920:intron
TGAAAATCTGACATGGGTGA+AGG 0.643653 6_3:+34056124 Msa0948930:CDS
TTGACAAATAGCTAAATCCA+GGG 0.645575 6_3:-34055719 Msa0948920:intron
GAAGGGTGGATATACTGAAG+AGG 0.646866 6_3:+34054441 Msa0948930:CDS
AAATCTGACATGGGTGAAGG+CGG 0.649189 6_3:+34056127 Msa0948930:CDS
TCCTCATCACCATAAAGTGT+AGG 0.649583 6_3:-34054760 Msa0948920:intron
GGGTGGATATACTGAAGAGG+CGG 0.655174 6_3:+34054444 Msa0948930:CDS
TTGTTGATCAAGTATACACA+TGG 0.655805 6_3:+34057186 Msa0948930:CDS
TCAATGTGACGGCTGTGATG+CGG 0.656755 6_3:-34057353 Msa0948920:intron
ACCGGCGGTCGATACATCCG+TGG 0.656844 6_3:-34054418 Msa0948920:intron
AACTCTCCTTAATAGCAGCA+CGG 0.661985 6_3:-34056394 Msa0948920:intron
AGTTGTATAGGAGAGCCTGA+TGG 0.666593 6_3:-34055000 Msa0948920:intron
TTTGATCCTAAAGTTCAACA+AGG 0.673250 6_3:+34056776 Msa0948930:CDS
ACTCCATCTGAAATTCCAGT+CGG 0.673636 6_3:-34056431 Msa0948920:intron
AGTTGTGTGGAAAACAAACA+AGG 0.675905 6_3:+34056191 Msa0948930:CDS
TGAATGTTGAAAATCTGACA+TGG 0.677775 6_3:+34056117 Msa0948930:CDS
GTATATCCACCCTTCACCGG+CGG 0.688508 6_3:-34054433 Msa0948920:intron
TCTCCTATACAACTTCAGCA+AGG 0.689990 6_3:+34055009 Msa0948930:CDS
TAATCAATTAGGCATTGACA+AGG 0.692865 6_3:+34056067 Msa0948930:CDS
GAATGTTGAAAATCTGACAT+GGG 0.692894 6_3:+34056118 Msa0948930:CDS
AGTTCAGACTGTGATTGGGA+TGG 0.697060 6_3:+34054913 Msa0948930:CDS
ATGGAATATCAGCCTTTACG+CGG 0.711323 6_3:-34054093 Msa0948920:intron
TAAAGTGTAGGATCATAACC+AGG 0.713959 6_3:-34054748 Msa0948920:intron
TCAACCGGTGACGAAAGCAG+AGG 0.716163 6_3:+34053865 Msa0948930:CDS
ACTAGGAAGGAAATCGACGA+CGG 0.716999 6_3:-34055426 Msa0948920:intron
AGAATGTGTCGCAACCAAGG+AGG 0.723095 6_3:+34055113 Msa0948930:CDS
TCTATCCCACCAAACAGATG+CGG 0.724005 6_3:-34054242 Msa0948920:intron
AAAAGTTCGAGATTTCGACA+AGG 0.753045 6_3:-34055153 Msa0948920:intron
CATCTGCAGAAAGATCAGGA+AGG 0.757365 6_3:-34055587 Msa0948920:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCATTATAAAAAATTAAGA+GGG - chr6_3:34056597-34056616 Msa0948920:intron 15.0%
!! ATAATAGAGACAATTTGAAT+AGG + chr6_3:34053987-34054006 Msa0948930:CDS 20.0%
!!! AATTTTTCAATTGAAACAAG+TGG - chr6_3:34054376-34054395 Msa0948920:intron 20.0%
!! ACTTGTTTCAATTGAAAAAT+TGG + chr6_3:34054375-34054394 Msa0948930:CDS 20.0%
!! GTATGTTGAATTATGAAAAT+CGG - chr6_3:34054488-34054507 Msa0948920:intron 20.0%
!! ATTAACATATTAGCAGAATT+GGG - chr6_3:34054946-34054965 Msa0948920:intron 20.0%
!! AATTAACATATTAGCAGAAT+TGG - chr6_3:34054947-34054966 Msa0948920:intron 20.0%
!!! ATATTTTCAAATTACAAGAG+CGG + chr6_3:34055655-34055674 Msa0948930:CDS 20.0%
!! TATTAGCAAAATATCAAGAT+TGG + chr6_3:34055985-34056004 Msa0948930:CDS 20.0%
!! GCATTATAAAAAATTAAGAG+GGG - chr6_3:34056596-34056615 Msa0948920:intron 20.0%
!! CAGCATTATAAAAAATTAAG+AGG - chr6_3:34056598-34056617 Msa0948920:intron 20.0%
!! ATTATTTCATATATTGAGCA+TGG + chr6_3:34056830-34056849 Msa0948930:intron 20.0%
!! TTTATCAATTTCTATCATGA+AGG + chr6_3:34057238-34057257 Msa0948930:CDS 20.0%
! AATAACAATCAGACTATTGA+TGG + chr6_3:34054043-34054062 Msa0948930:CDS 25.0%
!!! ATGTAGAAGAATTTTTGGAT+TGG + chr6_3:34054134-34054153 Msa0948930:CDS 25.0%
!!! TGTAGAAGAATTTTTGGATT+GGG + chr6_3:34054135-34054154 Msa0948930:CDS 25.0%
! TTTCAATTGAAAAATTGGAG+AGG + chr6_3:34054380-34054399 Msa0948930:CDS 25.0%
!!! TTCAACATACTTGTTATCAA+TGG + chr6_3:34054498-34054517 Msa0948930:CDS 25.0%
! AAAAACTCCAGTTTCATTAA+AGG - chr6_3:34055087-34055106 Msa0948920:intron 25.0%
! TGATTGTTTGAAAGAAGATA+AGG + chr6_3:34055236-34055255 Msa0948930:CDS 25.0%
! CTATAACAAACAATATTCCA+CGG - chr6_3:34055495-34055514 Msa0948920:intron 25.0%
!!! TGGAATATTGTTTGTTATAG+AGG + chr6_3:34055495-34055514 Msa0948930:CDS 25.0%
!! ATTGAAGGTTGATTTAATTG+CGG + chr6_3:34055521-34055540 Msa0948930:CDS 25.0%
!!! ACATCTATTTTTATGCTCAA+TGG - chr6_3:34055558-34055577 Msa0948920:intron 25.0%
! CATTCATCAATAATTTCATC+CGG - chr6_3:34055906-34055925 Msa0948920:intron 25.0%
!! ATCAGTTCAAGAATCTTTTT+CGG - chr6_3:34056098-34056117 Msa0948920:intron 25.0%
! ATTAGCATCGTATTTAACAA+GGG + chr6_3:34056647-34056666 Msa0948930:CDS 25.0%
!! TACAATTTTCTCCAATGTTA+AGG + chr6_3:34056911-34056930 Msa0948930:CDS 25.0%
! AGTGTCAACAATAAAAGATA+TGG + chr6_3:34057002-34057021 Msa0948930:CDS 25.0%
! ATTTATGACTTCTCTTGATA+TGG + chr6_3:34057211-34057230 Msa0948930:CDS 25.0%
! GTCTCTATTATTGTTGTTGT+TGG - chr6_3:34053978-34053997 Msa0948920:intron 30.0%
TTATTACGAACCCTAATAAC+CGG - chr6_3:34054028-34054047 Msa0948920:intron 30.0%
!! GCTGATATTCCATTGTTTTA+CGG + chr6_3:34054103-34054122 Msa0948930:CDS 30.0%
! GATGGATGTAGAAGAATTTT+TGG + chr6_3:34054129-34054148 Msa0948930:CDS 30.0%
! CAAAATAATGGGAAGCATAT+TGG + chr6_3:34054583-34054602 Msa0948930:CDS 30.0%
GATACTTAATGATCATTGCT+TGG + chr6_3:34054705-34054724 Msa0948930:intron 30.0%
!!! AACACACTTTTGGAATTGTA+TGG + chr6_3:34054784-34054803 Msa0948930:CDS 30.0%
TTATATATCCGATTCAGTTG+AGG + chr6_3:34054843-34054862 Msa0948930:CDS 30.0%
! ATTGAAGCAGAAGCTTTTAA+TGG + chr6_3:34054964-34054983 Msa0948930:CDS 30.0%
TTGTACATCATGAATTGAAC+CGG - chr6_3:34055064-34055083 Msa0948920:intron 30.0%
TGTACAACCTTTAATGAAAC+TGG + chr6_3:34055077-34055096 Msa0948930:CDS 30.0%
GTTGTGAATGAATCTTTCTT+CGG - chr6_3:34055294-34055313 Msa0948920:intron 30.0%
!!! GATGACTTGTCATTGATTTT+TGG + chr6_3:34055321-34055340 Msa0948930:CDS 30.0%
! TTGTTATAGAGGTGTATTGA+AGG + chr6_3:34055506-34055525 Msa0948930:CDS 30.0%
TTTCTGCAGATGTTATATCA+AGG + chr6_3:34055598-34055617 Msa0948930:CDS 30.0%
TTGACAAATAGCTAAATCCA+GGG - chr6_3:34055722-34055741 Msa0948920:intron 30.0%
CAACTAAGAAGAACAAAGAT+AGG + chr6_3:34055739-34055758 Msa0948930:CDS 30.0%
! ATTTTCTTTAACACTCCTCT+TGG - chr6_3:34055814-34055833 Msa0948920:intron 30.0%
AGTTTCTACAAGAATGAAGT+TGG + chr6_3:34055861-34055880 Msa0948930:CDS 30.0%
AACATCTAACCTGTTAACTT+TGG + chr6_3:34055953-34055972 Msa0948930:CDS 30.0%
TAGAGAAGCAATTGAAAAGA+GGG + chr6_3:34056043-34056062 Msa0948930:CDS 30.0%
GAAAAGAGGGTTAATCAATT+AGG + chr6_3:34056056-34056075 Msa0948930:CDS 30.0%
!! TAATCAATTAGGCATTGACA+AGG + chr6_3:34056067-34056086 Msa0948930:CDS 30.0%
TGAATGTTGAAAATCTGACA+TGG + chr6_3:34056117-34056136 Msa0948930:CDS 30.0%
GAATGTTGAAAATCTGACAT+GGG + chr6_3:34056118-34056137 Msa0948930:CDS 30.0%
! TTAGGTAGAGTCTATACTTT+TGG - chr6_3:34056163-34056182 Msa0948920:intron 30.0%
CTACTTTACTTGAAAACAGA+AGG + chr6_3:34056300-34056319 Msa0948930:CDS 30.0%
TTCAACAAGACGTGAAATAA+TGG + chr6_3:34056514-34056533 Msa0948930:CDS 30.0%
CATTAGCATCGTATTTAACA+AGG + chr6_3:34056646-34056665 Msa0948930:CDS 30.0%
TGAATTTGAGAAGAAGTTAG+TGG + chr6_3:34056721-34056740 Msa0948930:CDS 30.0%
!! TGTTGAACTTTAGGATCAAA+AGG - chr6_3:34056776-34056795 Msa0948920:intron 30.0%
TTTGATCCTAAAGTTCAACA+AGG + chr6_3:34056776-34056795 Msa0948930:CDS 30.0%
TCGACAGGTAGTAAAAAAAT+TGG + chr6_3:34056875-34056894 Msa0948930:intron 30.0%
! AATTTTCTCCAATGTTAAGG+AGG + chr6_3:34056914-34056933 Msa0948930:CDS 30.0%
CATGAAGTTCAATACTATTG+AGG + chr6_3:34056968-34056987 Msa0948930:CDS 30.0%
AGTAACTGTGACAAAGAATT+TGG + chr6_3:34057034-34057053 Msa0948930:CDS 30.0%
!! ATTAATTGCTACTTTGCCTT+TGG + chr6_3:34057104-34057123 Msa0948930:CDS 30.0%
! ATAGAGAATGTCATTTCCAA+AGG - chr6_3:34057123-34057142 Msa0948920:intron 30.0%
TTTGGAAATGACATTCTCTA+TGG + chr6_3:34057122-34057141 Msa0948930:CDS 30.0%
TTGTTGATCAAGTATACACA+TGG + chr6_3:34057186-34057205 Msa0948930:CDS 30.0%
TCTAATCGTTGAAGAATAGA+CGG - chr6_3:34057269-34057288 Msa0948920:intron 30.0%
CTGAAACTAAAACTCCTTAT+TGG + chr6_3:34057291-34057310 Msa0948930:CDS 30.0%
!! ATTGTTGTTGTTGGTGTTGT+TGG - chr6_3:34053969-34053988 Msa0948920:intron 35.0%
AGAGACAATTTGAATAGGAG+AGG + chr6_3:34053992-34054011 Msa0948930:CDS 35.0%
AGAACCAATTCCGGTTATTA+GGG + chr6_3:34054015-34054034 Msa0948930:CDS 35.0%
!! TGATAGATTTTTCGACGTCA+TGG + chr6_3:34054168-34054187 Msa0948930:CDS 35.0%
CATGAAAGATTTAACTCTCG+CGG + chr6_3:34054334-34054353 Msa0948930:CDS 35.0%
GTTGCTCCTTGCAAAATAAT+GGG + chr6_3:34054572-34054591 Msa0948930:CDS 35.0%
!! ATGCTTCCCATTATTTTGCA+AGG - chr6_3:34054581-34054600 Msa0948920:intron 35.0%
TAAAGTGTAGGATCATAACC+AGG - chr6_3:34054751-34054770 Msa0948920:intron 35.0%
GGTTATGATCCTACACTTTA+TGG + chr6_3:34054751-34054770 Msa0948930:CDS 35.0%
! TGATGAGGATAACACACTTT+TGG + chr6_3:34054774-34054793 Msa0948930:CDS 35.0%
TATCAGATGATGCATATGCT+CGG + chr6_3:34054815-34054834 Msa0948930:CDS 35.0%
AACAAGTCTGATCAATCGAA+AGG + chr6_3:34054885-34054904 Msa0948930:CDS 35.0%
ACAAGTCTGATCAATCGAAA+GGG + chr6_3:34054886-34054905 Msa0948930:CDS 35.0%
TGAAAGTTCAGACTGTGATT+GGG + chr6_3:34054909-34054928 Msa0948930:CDS 35.0%
ATTCCTTGCTGAAGTTGTAT+AGG - chr6_3:34055015-34055034 Msa0948920:intron 35.0%
CAAATAGATGAACTGAATGC+CGG + chr6_3:34055042-34055061 Msa0948930:CDS 35.0%
AAAAGTTCGAGATTTCGACA+AGG - chr6_3:34055156-34055175 Msa0948920:intron 35.0%
! TGTCGAAATCTCGAACTTTT+TGG + chr6_3:34055156-34055175 Msa0948930:CDS 35.0%
! GTCGAAATCTCGAACTTTTT+GGG + chr6_3:34055157-34055176 Msa0948930:CDS 35.0%
TTCAAACAATCATCGTTGTC+TGG - chr6_3:34055228-34055247 Msa0948920:intron 35.0%
!! CGGATTTGTTTGTTGATTTG+CGG - chr6_3:34055274-34055293 Msa0948920:intron 35.0%
TTACCAGTCATCTAAATTCG+AGG + chr6_3:34055347-34055366 Msa0948930:CDS 35.0%
ATAACATCTGCAGAAAGATC+AGG - chr6_3:34055594-34055613 Msa0948920:intron 35.0%
!!! TTTAGCAGCAGTTTTGAAGA+CGG + chr6_3:34055627-34055646 Msa0948930:CDS 35.0%
AATAGCTAAATCCAGGGATA+TGG - chr6_3:34055716-34055735 Msa0948920:intron 35.0%
GTTGACAAATAGCTAAATCC+AGG - chr6_3:34055723-34055742 Msa0948920:intron 35.0%
CTAAGAAGAACAAAGATAGG+TGG + chr6_3:34055742-34055761 Msa0948930:CDS 35.0%
TTCTACAAGAATGAAGTTGG+TGG + chr6_3:34055864-34055883 Msa0948930:CDS 35.0%
GAATGTAAAACCTACTTTGC+TGG + chr6_3:34055921-34055940 Msa0948930:CDS 35.0%
! TGTATCTTTTCCAGCAAAGT+AGG - chr6_3:34055934-34055953 Msa0948920:intron 35.0%
AAGACACATGAAGAAACTGA+TGG + chr6_3:34056014-34056033 Msa0948930:CDS 35.0%
AGACACATGAAGAAACTGAT+GGG + chr6_3:34056015-34056034 Msa0948930:CDS 35.0%
CTAGAGAAGCAATTGAAAAG+AGG + chr6_3:34056042-34056061 Msa0948930:CDS 35.0%
!! AGAGTCTATACTTTTGGAGA+CGG - chr6_3:34056157-34056176 Msa0948920:intron 35.0%
! CCACACAACTAACTCTTTTT+AGG - chr6_3:34056181-34056200 Msa0948920:intron 35.0%
CCTAAAAAGAGTTAGTTGTG+TGG + chr6_3:34056178-34056197 Msa0948930:CDS 35.0%
AGTTGTGTGGAAAACAAACA+AGG + chr6_3:34056191-34056210 Msa0948930:CDS 35.0%
GGAAAACAAACAAGGTCATA+TGG + chr6_3:34056199-34056218 Msa0948930:CDS 35.0%
TGCATCTGAACTACTAGTTA+AGG - chr6_3:34056231-34056250 Msa0948920:intron 35.0%
GATGCATCCTATTTAAGAAG+TGG + chr6_3:34056245-34056264 Msa0948930:CDS 35.0%
TCCTATTTAAGAAGTGGAGT+TGG + chr6_3:34056251-34056270 Msa0948930:CDS 35.0%
TCCAACTCCACTTCTTAAAT+AGG - chr6_3:34056255-34056274 Msa0948920:intron 35.0%
! TATTAACCGTGCTGCTATTA+AGG + chr6_3:34056388-34056407 Msa0948930:CDS 35.0%
!! ACTGGTAAGATTAGCTTTAC+TGG + chr6_3:34056491-34056510 Msa0948930:CDS 35.0%
AAACCAGCTTCACTTGAATT+AGG + chr6_3:34056560-34056579 Msa0948930:CDS 35.0%
TTTCGTGTGTTTGTTCAAGA+AGG + chr6_3:34056689-34056708 Msa0948930:CDS 35.0%
ATGACTTCTCTTGATATGGA+AGG + chr6_3:34057215-34057234 Msa0948930:CDS 35.0%
ATTCCTTGAGTTCAATGTGA+CGG - chr6_3:34057367-34057386 Msa0948920:intron 35.0%
CAAGGAATTGCATGTAGATT+TGG + chr6_3:34057379-34057398 Msa0948930:CDS 35.0%
! ATGTAGATTTGGTTCACTTC+AGG + chr6_3:34057390-34057409 Msa0948930:CDS 35.0%
GGAGTCTATATTCTGATCAA+AGG + chr6_3:34057411-34057430 Msa0948930:CDS 35.0%
AGTGAAATGTATGTGCTTGA+CGG - chr6_3:34057450-34057469 Msa0948920:intron 35.0%
AGCACATACATTTCACTCAA+TGG + chr6_3:34057453-34057472 Msa0948930:CDS 35.0%
GCACATACATTTCACTCAAT+GGG + chr6_3:34057454-34057473 Msa0948930:CDS 35.0%
! TTGTGCAGCCAAAGCATTAA+GGG - chr6_3:34053912-34053931 Msa0948920:intron 40.0%
! TTTGTGCAGCCAAAGCATTA+AGG - chr6_3:34053913-34053932 Msa0948920:intron 40.0%
TAATGCTTTGGCTGCACAAA+TGG + chr6_3:34053913-34053932 Msa0948930:CDS 40.0%
TGTTGTTGGCGATGTTATTC+AGG - chr6_3:34053955-34053974 Msa0948920:intron 40.0%
GAGAACCAATTCCGGTTATT+AGG + chr6_3:34054014-34054033 Msa0948930:CDS 40.0%
!! AATCAGACTATTGATGGCGA+TGG + chr6_3:34054049-34054068 Msa0948930:CDS 40.0%
ATGGAATATCAGCCTTTACG+CGG - chr6_3:34054096-34054115 Msa0948920:intron 40.0%
!! TCCATTGTTTTACGGAACGA+TGG + chr6_3:34054111-34054130 Msa0948930:CDS 40.0%
TCCATCGTTCCGTAAAACAA+TGG - chr6_3:34054115-34054134 Msa0948920:intron 40.0%
ATCTTAACCTGCTTGCTTTC+CGG - chr6_3:34054199-34054218 Msa0948920:intron 40.0%
!! TGAAAAGTACCGCATCTGTT+TGG + chr6_3:34054233-34054252 Msa0948930:CDS 40.0%
GAAAGAACCCTATTCGAACT+TGG + chr6_3:34054290-34054309 Msa0948930:CDS 40.0%
TCCTTCTCCAAGTTCGAATA+GGG - chr6_3:34054300-34054319 Msa0948920:intron 40.0%
ATCCTTCTCCAAGTTCGAAT+AGG - chr6_3:34054301-34054320 Msa0948920:intron 40.0%
CAAACCGAGAACGATGTAAT+TGG + chr6_3:34054550-34054569 Msa0948930:CDS 40.0%
GCAACCAATTACATCGTTCT+CGG - chr6_3:34054557-34054576 Msa0948920:intron 40.0%
GGTTGCTCCTTGCAAAATAA+TGG + chr6_3:34054571-34054590 Msa0948930:CDS 40.0%
TGGTGTAGATTTGCATCATG+AGG + chr6_3:34054603-34054622 Msa0948930:CDS 40.0%
TGAAGTGGATGACAAAAGAG+AGG + chr6_3:34054645-34054664 Msa0948930:intron 40.0%
TGCTTGGCATCAGATAATTG+TGG + chr6_3:34054721-34054740 Msa0948930:intron 40.0%
TCAGATAATTGTGGTAGTCC+TGG + chr6_3:34054730-34054749 Msa0948930:intron 40.0%
! TCCTACACTTTATGGTGATG+AGG + chr6_3:34054759-34054778 Msa0948930:CDS 40.0%
TCCTCATCACCATAAAGTGT+AGG - chr6_3:34054763-34054782 Msa0948920:intron 40.0%
GTGAAAGTTCAGACTGTGAT+TGG + chr6_3:34054908-34054927 Msa0948930:CDS 40.0%
! AGCAGAAGCTTTTAATGGTC+TGG + chr6_3:34054969-34054988 Msa0948930:CDS 40.0%
TCTCCTATACAACTTCAGCA+AGG + chr6_3:34055009-34055028 Msa0948930:CDS 40.0%
TGGTTGCGACACATTCTTTA+GGG - chr6_3:34055110-34055129 Msa0948920:intron 40.0%
TTGGTTGCGACACATTCTTT+AGG - chr6_3:34055111-34055130 Msa0948920:intron 40.0%
TAAAGAATGTGTCGCAACCA+AGG + chr6_3:34055110-34055129 Msa0948930:CDS 40.0%
!!! ACTTTTTGGGACAGATCCAT+CGG + chr6_3:34055170-34055189 Msa0948930:CDS 40.0%
AACAATCATCGTTGTCTGGT+GGG - chr6_3:34055224-34055243 Msa0948920:intron 40.0%
AAACAATCATCGTTGTCTGG+TGG - chr6_3:34055225-34055244 Msa0948920:intron 40.0%
CTTCCTCGAATTTAGATGAC+TGG - chr6_3:34055353-34055372 Msa0948920:intron 40.0%
! TCTAAATTCGAGGAAGTGCA+AGG + chr6_3:34055357-34055376 Msa0948930:CDS 40.0%
! CATCTTTTCTCACAAGCAGT+CGG + chr6_3:34055684-34055703 Msa0948930:CDS 40.0%
GCAAACTGATTGAAACCAAG+AGG + chr6_3:34055796-34055815 Msa0948930:CDS 40.0%
!! GAAGAAGTGCCAAAGTTAAC+AGG - chr6_3:34055965-34055984 Msa0948920:intron 40.0%
TGAAAATCTGACATGGGTGA+AGG + chr6_3:34056124-34056143 Msa0948930:CDS 40.0%
! CTTGAAAACAGAAGGTGCAA+TGG + chr6_3:34056308-34056327 Msa0948930:CDS 40.0%
! ACAGAAGGTGCAATGGTATT+TGG + chr6_3:34056315-34056334 Msa0948930:CDS 40.0%
GGAAGATAAGTGTTTGTTCC+AGG - chr6_3:34056359-34056378 Msa0948920:intron 40.0%
GCACGGTTAATAGATTCTCT+TGG - chr6_3:34056380-34056399 Msa0948920:intron 40.0%
AACTCTCCTTAATAGCAGCA+CGG - chr6_3:34056397-34056416 Msa0948920:intron 40.0%
! ATCTGAAATTCCAGTCGGTA+TGG - chr6_3:34056429-34056448 Msa0948920:intron 40.0%
! ATACCGACTGGAATTTCAGA+TGG + chr6_3:34056428-34056447 Msa0948930:CDS 40.0%
! ACTCCATCTGAAATTCCAGT+CGG - chr6_3:34056434-34056453 Msa0948920:intron 40.0%
TTCGATGTAGTACCTGGATT+TGG + chr6_3:34056455-34056474 Msa0948930:CDS 40.0%
CAAGGGAGAAATTTGTGTTG+CGG + chr6_3:34056664-34056683 Msa0948930:CDS 40.0%
AAGGGAGAAATTTGTGTTGC+GGG + chr6_3:34056665-34056684 Msa0948930:CDS 40.0%
TGAGGACCTTGTTGAACTTT+AGG - chr6_3:34056785-34056804 Msa0948920:intron 40.0%
TAAAGTTCAACAAGGTCCTC+AGG + chr6_3:34056784-34056803 Msa0948930:CDS 40.0%
! ATATAGCAAGCACCGTATCA+AGG + chr6_3:34057057-34057076 Msa0948930:CDS 40.0%
TGTTCGAATGGACCTTGATA+CGG - chr6_3:34057072-34057091 Msa0948920:intron 40.0%
CCAAATAACTCCTGTTCGAA+TGG - chr6_3:34057084-34057103 Msa0948920:intron 40.0%
CCATTCGAACAGGAGTTATT+TGG + chr6_3:34057081-34057100 Msa0948930:CDS 40.0%
GGAAATGACATTCTCTATGG+AGG + chr6_3:34057125-34057144 Msa0948930:CDS 40.0%
TATGGAGGTTACAAGATGAG+TGG + chr6_3:34057140-34057159 Msa0948930:CDS 40.0%
ATGGAGGTTACAAGATGAGT+GGG + chr6_3:34057141-34057160 Msa0948930:CDS 40.0%
GTTTGGAAGAGATTGTGGAT+TGG + chr6_3:34057163-34057182 Msa0948930:CDS 40.0%
! AAAACTCCTTATTGGCCTGT+TGG + chr6_3:34057299-34057318 Msa0948930:CDS 40.0%
GTGAAATGTATGTGCTTGAC+GGG - chr6_3:34057449-34057468 Msa0948920:intron 40.0%
CATTTCACTCAATGGGATTC+AGG + chr6_3:34057461-34057480 Msa0948930:CDS 40.0%
TAGGAGAGGAGAACCAATTC+CGG + chr6_3:34054006-34054025 Msa0948930:CDS 45.0%
CGAACCCTAATAACCGGAAT+TGG - chr6_3:34054022-34054041 Msa0948920:intron 45.0%
!! ACTATTGATGGCGATGGATG+TGG + chr6_3:34054055-34054074 Msa0948930:CDS 45.0%
!! CTATTGATGGCGATGGATGT+GGG + chr6_3:34054056-34054075 Msa0948930:CDS 45.0%
TCACCATGATTACCGCGTAA+AGG + chr6_3:34054081-34054100 Msa0948930:CDS 45.0%
TCTTAACCTGCTTGCTTTCC+GGG - chr6_3:34054198-34054217 Msa0948920:intron 45.0%
!! AAAGTACCGCATCTGTTTGG+TGG + chr6_3:34054236-34054255 Msa0948930:CDS 45.0%
! AAGTACCGCATCTGTTTGGT+GGG + chr6_3:34054237-34054256 Msa0948930:CDS 45.0%
TCTATCCCACCAAACAGATG+CGG - chr6_3:34054245-34054264 Msa0948920:intron 45.0%
ACCCTATTCGAACTTGGAGA+AGG + chr6_3:34054296-34054315 Msa0948930:CDS 45.0%
TCAGTATATCCACCCTTCAC+CGG - chr6_3:34054439-34054458 Msa0948920:intron 45.0%
GAAGGGTGGATATACTGAAG+AGG + chr6_3:34054441-34054460 Msa0948930:CDS 45.0%
GATGATGCATATGCTCGGAA+AGG + chr6_3:34054820-34054839 Msa0948930:CDS 45.0%
CAACTCAGCCTCAACTGAAT+CGG - chr6_3:34054854-34054873 Msa0948920:intron 45.0%
GAGGCTGAGTTGCATATTCA+AGG + chr6_3:34054862-34054881 Msa0948930:CDS 45.0%
AGTTCAGACTGTGATTGGGA+TGG + chr6_3:34054913-34054932 Msa0948930:CDS 45.0%
AGTTGTATAGGAGAGCCTGA+TGG - chr6_3:34055003-34055022 Msa0948920:intron 45.0%
!! TGTTGATTTGCGGTAGCAAG+TGG - chr6_3:34055264-34055283 Msa0948920:intron 45.0%
ACTAGGAAGGAAATCGACGA+CGG - chr6_3:34055429-34055448 Msa0948920:intron 45.0%
! GTCGATTTCCTTCCTAGTGA+TGG + chr6_3:34055431-34055450 Msa0948930:CDS 45.0%
CATCTGCAGAAAGATCAGGA+AGG - chr6_3:34055590-34055609 Msa0948920:intron 45.0%
AAATCTGACATGGGTGAAGG+CGG + chr6_3:34056127-34056146 Msa0948930:CDS 45.0%
!! TCTATACTTTTGGAGACGGC+TGG - chr6_3:34056153-34056172 Msa0948920:intron 45.0%
TCAAGCACAATGCAACTACC+TGG + chr6_3:34056338-34056357 Msa0948930:CDS 45.0%
TCGTTAAAGACCATACCGAC+TGG + chr6_3:34056416-34056435 Msa0948930:CDS 45.0%
! GGAGTATTCGATGTAGTACC+TGG + chr6_3:34056449-34056468 Msa0948930:CDS 45.0%
CCTCCTAATTCAAGTGAAGC+TGG - chr6_3:34056566-34056585 Msa0948920:intron 45.0%
CCAGCTTCACTTGAATTAGG+AGG + chr6_3:34056563-34056582 Msa0948930:CDS 45.0%
! TAGTGGACAAAGCAAGAGCT+TGG + chr6_3:34056738-34056757 Msa0948930:CDS 45.0%
AGTGGACAAAGCAAGAGCTT+GGG + chr6_3:34056739-34056758 Msa0948930:CDS 45.0%
AATTGCCTCTTGTCAACCTG+AGG - chr6_3:34056803-34056822 Msa0948920:intron 45.0%
GATGTAGCAACTCTTTCGAC+AGG + chr6_3:34056860-34056879 Msa0948930:intron 45.0%
GACAAGTTGTGTTGTACGCA+TGG - chr6_3:34056940-34056959 Msa0948920:intron 45.0%
GCGTACAACACAACTTGTCA+TGG + chr6_3:34056941-34056960 Msa0948930:CDS 45.0%
GTATCAAGGTCCATTCGAAC+AGG + chr6_3:34057071-34057090 Msa0948930:CDS 45.0%
! GGTTACAAGATGAGTGGGTT+TGG + chr6_3:34057146-34057165 Msa0948930:CDS 45.0%
! AGTGGGTTTGGAAGAGATTG+TGG + chr6_3:34057158-34057177 Msa0948930:CDS 45.0%
CTAACTCCAACAGGCCAATA+AGG - chr6_3:34057308-34057327 Msa0948920:intron 45.0%
! TATTGGCCTGTTGGAGTTAG+TGG + chr6_3:34057308-34057327 Msa0948930:CDS 45.0%
CGATTACCACTAACTCCAAC+AGG - chr6_3:34057317-34057336 Msa0948920:intron 45.0%
! AATGTATGTGCTTGACGGGT+GGG - chr6_3:34057445-34057464 Msa0948920:intron 45.0%
AAATGTATGTGCTTGACGGG+TGG - chr6_3:34057446-34057465 Msa0948920:intron 45.0%
TTCACTCAATGGGATTCAGG+AGG + chr6_3:34057464-34057483 Msa0948930:CDS 45.0%
TCACTCAATGGGATTCAGGA+GGG + chr6_3:34057465-34057484 Msa0948930:CDS 45.0%
CAGCCTTTACGCGGTAATCA+TGG - chr6_3:34054087-34054106 Msa0948920:intron 50.0%
GGGTGGATATACTGAAGAGG+CGG + chr6_3:34054444-34054463 Msa0948930:CDS 50.0%
TGAGGCTAGTGACTGTGTTC+TGG + chr6_3:34054621-34054640 Msa0948930:intron 50.0%
! TGACTGTGTTCTGGCTGAAG+TGG + chr6_3:34054630-34054649 Msa0948930:intron 50.0%
GGTCTGGTGCAAAAACCATC+AGG + chr6_3:34054985-34055004 Msa0948930:CDS 50.0%
AGAATGTGTCGCAACCAAGG+AGG + chr6_3:34055113-34055132 Msa0948930:CDS 50.0%
TTCTTCTGCTGCTACCTCCT+TGG - chr6_3:34055130-34055149 Msa0948920:intron 50.0%
TGGACACTCCATCACTAGGA+AGG - chr6_3:34055442-34055461 Msa0948920:intron 50.0%
! CTAGTGATGGAGTGTCCATC+CGG + chr6_3:34055444-34055463 Msa0948930:CDS 50.0%
ACAATATTCCACGGCACCCA+TGG - chr6_3:34055486-34055505 Msa0948920:intron 50.0%
TGGCGAAGATAGACTACAGC+CGG + chr6_3:34055884-34055903 Msa0948930:CDS 50.0%
! TTTGGTGCAACTGCAGGAAC+TGG + chr6_3:34056473-34056492 Msa0948930:CDS 50.0%
AAAGCAAGAGCTTGGGCTGT+TGG + chr6_3:34056746-34056765 Msa0948930:CDS 50.0%
!! AAGGTCCTCAGGTTGACAAG+AGG + chr6_3:34056795-34056814 Msa0948930:intron 50.0%
ACGCATGGCCTCCTTAACAT+TGG - chr6_3:34056925-34056944 Msa0948920:intron 50.0%
TCAATGTGACGGCTGTGATG+CGG - chr6_3:34057356-34057375 Msa0948920:intron 50.0%
CAGCCGTCACATTGAACTCA+AGG + chr6_3:34057361-34057380 Msa0948930:CDS 50.0%
! ATGTATGTGCTTGACGGGTG+GGG - chr6_3:34057444-34057463 Msa0948920:intron 50.0%
TCAACCGGTGACGAAAGCAG+AGG + chr6_3:34053865-34053884 Msa0948930:CDS 55.0%
ACAGCCTCTGCTTTCGTCAC+CGG - chr6_3:34053872-34053891 Msa0948920:intron 55.0%
TACCCCGGCCCTTAATGCTT+TGG + chr6_3:34053901-34053920 Msa0948930:CDS 55.0%
! AGCCAAAGCATTAAGGGCCG+GGG - chr6_3:34053906-34053925 Msa0948920:intron 55.0%
! CAGCCAAAGCATTAAGGGCC+GGG - chr6_3:34053907-34053926 Msa0948920:intron 55.0%
! GCAGCCAAAGCATTAAGGGC+CGG - chr6_3:34053908-34053927 Msa0948920:intron 55.0%
TTTCGACGTCATGGACGTCC+CGG + chr6_3:34054177-34054196 Msa0948930:CDS 55.0%
! ATGTATCGACCGCCGGTGAA+GGG + chr6_3:34054424-34054443 Msa0948930:CDS 55.0%
GTATATCCACCCTTCACCGG+CGG - chr6_3:34054436-34054455 Msa0948920:intron 55.0%
! TCATCGTTGTCTGGTGGGTC+TGG - chr6_3:34055219-34055238 Msa0948920:intron 55.0%
GGCGAACTTAGCGAAACTGC+AGG - chr6_3:34055408-34055427 Msa0948920:intron 55.0%
CGGATGGACACTCCATCACT+AGG - chr6_3:34055446-34055465 Msa0948920:intron 55.0%
!! GTCGGAAGTGTCCATATCCC+TGG + chr6_3:34055702-34055721 Msa0948930:CDS 55.0%
CCTGCAGTTGCACCAAATCC+AGG - chr6_3:34056470-34056489 Msa0948920:intron 55.0%
!! CCTGGATTTGGTGCAACTGC+AGG + chr6_3:34056467-34056486 Msa0948930:CDS 55.0%
! TGATGCGGCAGTTTTGCTGG+CGG - chr6_3:34057341-34057360 Msa0948920:intron 55.0%
! CTGTGATGCGGCAGTTTTGC+TGG - chr6_3:34057344-34057363 Msa0948920:intron 55.0%
CTCAATGGGATTCAGGAGGG+TGG + chr6_3:34057468-34057487 Msa0948930:CDS 55.0%
GACGAAAGCAGAGGCTGTCG+CGG + chr6_3:34053874-34053893 Msa0948930:CDS 60.0%
GGAAGCAACTCTCGTCGCCA+CGG + chr6_3:34054401-34054420 Msa0948930:CDS 60.0%
! GATGTATCGACCGCCGGTGA+AGG + chr6_3:34054423-34054442 Msa0948930:CDS 60.0%
GGAGAGGGAACTGAGTCCGA+TGG - chr6_3:34055189-34055208 Msa0948920:intron 60.0%
! TTGTCTGGTGGGTCTGGTGG+TGG - chr6_3:34055213-34055232 Msa0948920:intron 60.0%
! TCGTTGTCTGGTGGGTCTGG+TGG - chr6_3:34055216-34055235 Msa0948920:intron 60.0%
CCAGGCTTCTTGCTGGCCAT+GGG + chr6_3:34055467-34055486 Msa0948930:CDS 60.0%
GGACGTCCCGGAAAGCAAGC+AGG + chr6_3:34054189-34054208 Msa0948930:CDS 65.0%
! GCCACGGATGTATCGACCGC+CGG + chr6_3:34054417-34054436 Msa0948930:CDS 65.0%
ACCGGCGGTCGATACATCCG+TGG - chr6_3:34054421-34054440 Msa0948920:intron 65.0%
TATCGACCGCCGGTGAAGGG+TGG + chr6_3:34054427-34054446 Msa0948930:CDS 65.0%
!! TCTGGTGGGTCTGGTGGTGG+CGG - chr6_3:34055210-34055229 Msa0948920:intron 65.0%
! GATGGAGTGTCCATCCGGCC+AGG + chr6_3:34055449-34055468 Msa0948930:CDS 65.0%
CAGCAAGAAGCCTGGCCGGA+TGG - chr6_3:34055462-34055481 Msa0948920:intron 65.0%
CATCCGGCCAGGCTTCTTGC+TGG + chr6_3:34055460-34055479 Msa0948930:CDS 65.0%
TGGCCAGCAAGAAGCCTGGC+CGG - chr6_3:34055466-34055485 Msa0948920:intron 65.0%
GCCAGGCTTCTTGCTGGCCA+TGG + chr6_3:34055466-34055485 Msa0948930:CDS 65.0%
CCCATGGCCAGCAAGAAGCC+TGG - chr6_3:34055470-34055489 Msa0948920:intron 65.0%
GGCTGTCGCGGCTCTTACCC+CGG + chr6_3:34053886-34053905 Msa0948930:CDS 70.0%
!! GGGTCTGGTGGTGGCGGAGA+GGG - chr6_3:34055204-34055223 Msa0948920:intron 70.0%
!! TGGGTCTGGTGGTGGCGGAG+AGG - chr6_3:34055205-34055224 Msa0948920:intron 70.0%
! CTTGCTGGCCATGGGTGCCG+TGG + chr6_3:34055475-34055494 Msa0948930:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 34053857 34057505 34053857 ID=Msa0948930;Name=Msa0948930
chr6_3 mRNA 34053857 34057505 34053857 ID=Msa0948930-mRNA-1;Parent=Msa0948930;Name=Msa0948930-mRNA-1;_AED=0.39;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|1155
chr6_3 exon 34053857 34054628 34053857 ID=Msa0948930-mRNA-1:exon:8719;Parent=Msa0948930-mRNA-1
chr6_3 exon 34054734 34056805 34054734 ID=Msa0948930-mRNA-1:exon:8720;Parent=Msa0948930-mRNA-1
chr6_3 exon 34056882 34057505 34056882 ID=Msa0948930-mRNA-1:exon:8721;Parent=Msa0948930-mRNA-1
chr6_3 CDS 34053857 34054628 34053857 ID=Msa0948930-mRNA-1:cds;Parent=Msa0948930-mRNA-1
chr6_3 CDS 34054734 34056805 34054734 ID=Msa0948930-mRNA-1:cds;Parent=Msa0948930-mRNA-1
chr6_3 CDS 34056882 34057505 34056882 ID=Msa0948930-mRNA-1:cds;Parent=Msa0948930-mRNA-1
Gene Sequence

>Msa0948930

ATGGGAGATCAACCGGTGACGAAAGCAGAGGCTGTCGCGGCTCTTACCCCGGCCCTTAATGCTTTGGCTGCACAAATGGCGATATTAACAACTAACCTGAATAACATCGCCAACAACACCAACAACAACAATAATAGAGACAATTTGAATAGGAGAGGAGAACCAATTCCGGTTATTAGGGTTCGTAATAACAATCAGACTATTGATGGCGATGGATGTGGGAATCACCATGATTACCGCGTAAAGGCTGATATTCCATTGTTTTACGGAACGATGGATGTAGAAGAATTTTTGGATTGGGTGATTGATGTTGATAGATTTTTCGACGTCATGGACGTCCCGGAAAGCAAGCAGGTTAAGATGATTGTGAACAAACTGAAAAGTACCGCATCTGTTTGGTGGGATAGACTCGTTGTTCAGAGACATAGACAAAGAAAGAACCCTATTCGAACTTGGAGAAGGATGAAGCAGTTGATGCATGAAAGATTTAACTCTCGCGGTAGATTGTCTCTCTCGCCACTTGTTTCAATTGAAAAATTGGAGAGGAAGCAACTCTCGTCGCCACGGATGTATCGACCGCCGGTGAAGGGTGGATATACTGAAGAGGCGGATCATATCATTAATGAAGCCGATTTTCATAATTCAACATACTTGTTATCAATGGAGACAACACAAAATGAATCATATGCTCATCAAACCGAGAACGATGTAATTGGTTGCTCCTTGCAAAATAATGGGAAGCATATTGGTGTAGATTTGCATCATGAGGCTAATAATTGTGGTAGTCCTGGTTATGATCCTACACTTTATGGTGATGAGGATAACACACTTTTGGAATTGTATGGTGAAGTTGTATCAGATGATGCATATGCTCGGAAAGGTTATATATCCGATTCAGTTGAGGCTGAGTTGCATATTCAAGGAACAAGTCTGATCAATCGAAAGGGTGAAAGTTCAGACTGTGATTGGGATGGCATAATTCCCAATTCTGCTAATATGTTAATTGAAGCAGAAGCTTTTAATGGTCTGGTGCAAAAACCATCAGGCTCTCCTATACAACTTCAGCAAGGAATTTCTCAACAAATAGATGAACTGAATGCCGGTTCAATTCATGATGTACAACCTTTAATGAAACTGGAGTTTTTCCCTAAAGAATGTGTCGCAACCAAGGAGGTAGCAGCAGAAGAATCACCTTGTCGAAATCTCGAACTTTTTGGGACAGATCCATCGGACTCAGTTCCCTCTCCGCCACCACCAGACCCACCAGACAACGATGATTGTTTGAAAGAAGATAAGGAACCACTTGCTACCGCAAATCAACAAACAAATCCGAAGAAAGATTCATTCACAACATCTTTTGATGACTTGTCATTGATTTTTGGTGCTTACCAGTCATCTAAATTCGAGGAAGTGCAAGGTAACAATTATCATGACGACAACAATCCTGCAGTTTCGCTAAGTTCGCCGTCGTCGATTTCCTTCCTAGTGATGGAGTGTCCATCCGGCCAGGCTTCTTGCTGGCCATGGGTGCCGTGGAATATTGTTTGTTATAGAGGTGTATTGAAGGTTGATTTAATTGCGGCGCGAATAAGTCCATTGAGCATAAAAATAGATGTGCACAGAGACCTTCCTGATCTTTCTGCAGATGTTATATCAAGGACTGTTTTTAGCAGCAGTTTTGAAGACGGCAAACATATTTTCAAATTACAAGAGCGGCAGATGCATCTTTTCTCACAAGCAGTCGGAAGTGTCCATATCCCTGGATTTAGCTATTTGTCAACTAAGAAGAACAAAGATAGGTGGAGACTAGATAAACAGACACGTGAATCAATTTGCAAACTGATTGAAACCAAGAGGAGTGTTAAAGAAAATACAAAAAATGTACTAAATTCATTAATGAGTTTCTACAAGAATGAAGTTGGTGGCGAAGATAGACTACAGCCGGATGAAATTATTGATGAATGTAAAACCTACTTTGCTGGAAAAGATACAACATCTAACCTGTTAACTTTGGCACTTCTTCTATTAGCAAAATATCAAGATTGGCAAAGTAAGACACATGAAGAAACTGATGGGAGTACTAGAGAAGCAATTGAAAAGAGGGTTAATCAATTAGGCATTGACAAGGCTGTACCGAAAAAGATTCTTGAACTGATGAATGTTGAAAATCTGACATGGGTGAAGGCGGCCAGCCGTCTCCAAAAGTATAGACTCTACCTAAAAAGAGTTAGTTGTGTGGAAAACAAACAAGGTCATATGGCAGCAGCCTTAACTAGTAGTTCAGATGCATCCTATTTAAGAAGTGGAGTTGGACGACATTTGCATACATTGAATCGCTCTACTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACTACCTGGAACAAACACTTATCTTCCAAGAGAATCTATTAACCGTGCTGCTATTAAGGAGAGTTCGTTAAAGACCATACCGACTGGAATTTCAGATGGAGTATTCGATGTAGTACCTGGATTTGGTGCAACTGCAGGAACTGGTAAGATTAGCTTTACTGGTTCAACAAGACGTGAAATAATGGTATCTGCAGCTAGAAGTAATTTGAAACCAGCTTCACTTGAATTAGGAGGAAAATCACCCCTCTTAATTTTTTATAATGCTGATGTTGATAAAGCTGCTAAACTTGCTCTCATTAGCATCGTATTTAACAAGGGAGAAATTTGTGTTGCGGGTTTTCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTAGTGGACAAAGCAAGAGCTTGGGCTGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGTCCTCAGGTAGTAAAAAAATTGGAGACAAGAGTTACTACAATTTTCTCCAATGTTAAGGAGGCCATGCGTACAACACAACTTGTCATGGAACTCATGAAGTTCAATACTATTGAGGAAGCAATCAAAAGTGTCAACAATAAAAGATATGGCTTAGCAGCAGTAACTGTGACAAAGAATTTGGATATAGCAAGCACCGTATCAAGGTCCATTCGAACAGGAGTTATTTGGATTAATTGCTACTTTGCCTTTGGAAATGACATTCTCTATGGAGGTTACAAGATGAGTGGGTTTGGAAGAGATTGTGGATTGGTTGTTGATCAAGTATACACATGGTCATTTATGACTTCTCTTGATATGGAAGGTTTATCAATTTCTATCATGAAGGCTGATCCGTCTATTCTTCAACGATTAGATGCTGAAACTAAAACTCCTTATTGGCCTGTTGGAGTTAGTGGTAATCGACCGCCAGCAAAACTGCCGCATCACAGCCGTCACATTGAACTCAAGGAATTGCATGTAGATTTGGTTCACTTCAGGAGTCTATATTCTGATCAAAGGCAAGACTCCCCACCCGTCAAGCACATACATTTCACTCAATGGGATTCAGGAGGGTGGTCTCTTGTTCATTAA
Protein sequence

>Msa0948930

MGDQPVTKAEAVAALTPALNALAAQMAILTTNLNNIANNTNNNNNRDNLNRRGEPIPVIRVRNNNQTIDGDGCGNHHDYRVKADIPLFYGTMDVEEFLDWVIDVDRFFDVMDVPESKQVKMIVNKLKSTASVWWDRLVVQRHRQRKNPIRTWRRMKQLMHERFNSRGRLSLSPLVSIEKLERKQLSSPRMYRPPVKGGYTEEADHIINEADFHNSTYLLSMETTQNESYAHQTENDVIGCSLQNNGKHIGVDLHHEANNCGSPGYDPTLYGDEDNTLLELYGEVVSDDAYARKGYISDSVEAELHIQGTSLINRKGESSDCDWDGIIPNSANMLIEAEAFNGLVQKPSGSPIQLQQGISQQIDELNAGSIHDVQPLMKLEFFPKECVATKEVAAEESPCRNLELFGTDPSDSVPSPPPPDPPDNDDCLKEDKEPLATANQQTNPKKDSFTTSFDDLSLIFGAYQSSKFEEVQGNNYHDDNNPAVSLSSPSSISFLVMECPSGQASCWPWVPWNIVCYRGVLKVDLIAARISPLSIKIDVHRDLPDLSADVISRTVFSSSFEDGKHIFKLQERQMHLFSQAVGSVHIPGFSYLSTKKNKDRWRLDKQTRESICKLIETKRSVKENTKNVLNSLMSFYKNEVGGEDRLQPDEIIDECKTYFAGKDTTSNLLTLALLLLAKYQDWQSKTHEETDGSTREAIEKRVNQLGIDKAVPKKILELMNVENLTWVKAASRLQKYRLYLKRVSCVENKQGHMAAALTSSSDASYLRSGVGRHLHTLNRSTLLENRRCNGIWSSTMQLPGTNTYLPRESINRAAIKESSLKTIPTGISDGVFDVVPGFGATAGTGKISFTGSTRREIMVSAARSNLKPASLELGGKSPLLIFYNADVDKAAKLALISIVFNKGEICVAGFRVFVQEGIYDEFEKKLVDKARAWAVGDPFDPKVQQGPQVVKKLETRVTTIFSNVKEAMRTTQLVMELMKFNTIEEAIKSVNNKRYGLAAVTVTKNLDIASTVSRSIRTGVIWINCYFAFGNDILYGGYKMSGFGRDCGLVVDQVYTWSFMTSLDMEGLSISIMKADPSILQRLDAETKTPYWPVGVSGNRPPAKLPHHSRHIELKELHVDLVHFRSLYSDQRQDSPPVKHIHFTQWDSGGWSLVH*