AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0953060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953060 MtrunA17_Chr6g0470151 80.939 362 59 1 1 362 1 352 1.55e-156 452
Msa0953060 MtrunA17_Chr2g0289181 47.639 233 122 0 327 559 1 233 1.66e-70 226
Msa0953060 MtrunA17_Chr6g0470161 80.000 125 20 1 435 559 1 120 2.11e-62 201
Msa0953060 MtrunA17_Chr7g0266611 49.697 165 82 1 395 559 2 165 5.12e-34 126
Msa0953060 MtrunA17_Chr8g0366921 49.462 186 77 5 1 180 1 175 1.17e-26 110
Msa0953060 MtrunA17_Chr1g0202461 41.600 125 62 3 291 415 222 335 6.01e-26 110
Msa0953060 MtrunA17_Chr8g0348311 41.739 115 55 3 300 414 126 228 1.76e-21 95.9
Msa0953060 MtrunA17_Chr7g0248691 42.342 111 55 2 312 414 118 227 3.24e-21 95.1
Msa0953060 MtrunA17_Chr7g0270051 42.574 101 52 1 319 419 38 132 3.61e-19 87.8
Msa0953060 MtrunA17_Chr8g0387501 41.905 105 51 3 341 439 130 230 3.95e-18 84.7
Msa0953060 MtrunA17_Chr2g0293481 48.052 77 39 1 341 417 268 343 4.03e-18 87.4
Msa0953060 MtrunA17_Chr7g0238921 41.509 106 50 3 292 397 87 180 5.89e-17 82.0
Msa0953060 MtrunA17_Chr2g0319961 50.794 63 31 0 341 403 81 143 3.15e-15 75.9
Msa0953060 MtrunA17_Chr1g0184691 50.000 68 31 1 335 399 285 352 4.02e-15 77.0
Msa0953060 MtrunA17_Chr8g0379461 47.619 63 33 0 341 403 77 139 4.52e-15 75.1
Msa0953060 MtrunA17_Chr2g0284321 50.000 60 30 0 341 400 36 95 5.58e-15 74.3
Msa0953060 MtrunA17_Chr4g0053281 51.613 62 30 0 341 402 267 328 5.72e-15 76.3
Msa0953060 MtrunA17_Chr5g0401821 43.529 85 45 1 316 397 172 256 6.22e-15 75.5
Msa0953060 MtrunA17_Chr2g0293901 45.238 168 77 4 1 168 1 153 1.19e-14 73.2
Msa0953060 MtrunA17_Chr4g0042831 39.785 93 51 2 338 426 276 367 2.88e-14 74.7
Msa0953060 MtrunA17_Chr4g0071521 42.353 85 46 1 316 397 218 302 3.08e-14 73.9
Msa0953060 MtrunA17_Chr7g0218081 43.939 66 36 1 338 403 408 472 4.68e-14 74.7
Msa0953060 MtrunA17_Chr7g0218081 43.077 65 35 2 336 400 224 286 9.82e-11 64.3
Msa0953060 MtrunA17_Chr7g0228941 42.647 68 39 0 334 401 46 113 7.06e-14 68.6
Msa0953060 MtrunA17_Chr3g0139021 37.778 90 55 1 309 397 282 371 9.72e-14 73.2
Msa0953060 MtrunA17_Chr1g0147881 39.474 76 46 0 334 409 256 331 1.69e-13 72.0
Msa0953060 MtrunA17_Chr5g0418191 43.478 69 38 1 338 406 318 385 2.05e-13 72.4
Msa0953060 MtrunA17_Chr8g0387981 36.957 92 52 2 310 395 98 189 3.20e-13 71.2
Msa0953060 MtrunA17_Chr7g0263531 34.653 101 64 2 300 400 322 420 2.60e-12 68.9
Msa0953060 MtrunA17_Chr7g0249311 46.377 69 35 2 332 400 171 237 2.96e-12 69.3
Msa0953060 MtrunA17_Chr7g0249311 42.424 66 37 1 340 405 392 456 6.08e-12 68.6
Msa0953060 MtrunA17_Chr2g0302391 35.484 93 47 2 321 400 179 271 3.16e-12 68.6
Msa0953060 MtrunA17_Chr3g0129321 39.130 69 39 3 337 404 115 181 5.59e-12 65.1
Msa0953060 MtrunA17_Chr3g0136961 40.476 84 49 1 315 397 112 195 5.86e-12 66.6
Msa0953060 MtrunA17_Chr4g0051881 45.902 61 32 1 340 400 178 237 6.50e-12 67.0
Msa0953060 MtrunA17_Chr4g0074001 30.702 114 73 3 291 403 313 421 6.53e-12 68.2
Msa0953060 MtrunA17_Chr3g0079691 50.000 62 29 2 339 400 279 338 7.65e-12 68.2
Msa0953060 MtrunA17_Chr3g0079691 39.062 64 38 1 340 403 495 557 2.22e-11 66.6
Msa0953060 MtrunA17_Chr4g0001361 42.169 83 47 1 335 416 157 239 8.69e-12 66.6
Msa0953060 MtrunA17_Chr5g0443131 46.774 62 32 1 340 401 157 217 8.80e-12 66.2
Msa0953060 MtrunA17_Chr7g0249301 42.188 64 36 1 340 403 292 354 1.22e-11 66.6
Msa0953060 MtrunA17_Chr7g0243891 48.529 68 33 2 333 400 209 274 1.23e-11 67.4
Msa0953060 MtrunA17_Chr5g0445311 38.806 67 40 1 340 406 364 429 1.98e-11 66.6
Msa0953060 MtrunA17_Chr3g0101131 38.806 67 40 1 340 406 415 480 2.11e-11 66.6
Msa0953060 MtrunA17_Chr1g0194481 39.437 71 42 1 340 410 158 227 4.29e-11 64.3
Msa0953060 MtrunA17_Chr7g0266621 46.154 91 42 1 1 91 1 84 4.86e-11 63.9
Msa0953060 MtrunA17_Chr3g0099641 36.000 75 47 1 326 400 238 311 5.83e-11 65.1
Msa0953060 MtrunA17_Chr2g0333851 43.750 64 36 0 338 401 167 230 6.91e-11 63.9
Msa0953060 MtrunA17_Chr8g0368721 46.809 188 84 4 1 187 1 173 8.11e-11 63.5
Msa0953060 MtrunA17_Chr2g0288871 32.353 102 67 2 299 400 266 365 9.72e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953060 AT5G52830.1 48.980 98 48 2 318 415 144 239 3.18e-23 101
Msa0953060 AT4G01250.1 34.868 152 91 3 284 430 74 222 4.72e-21 94.4
Msa0953060 AT4G23550.1 45.349 86 46 1 332 417 132 216 4.94e-19 88.6
Msa0953060 AT1G30650.1 35.333 150 93 1 294 443 175 320 2.73e-17 84.7
Msa0953060 AT2G34830.1 50.725 69 33 1 341 409 216 283 5.87e-17 84.0
Msa0953060 AT2G34830.2 50.725 69 33 1 341 409 225 292 6.59e-17 83.6
Msa0953060 AT5G28650.1 40.217 92 52 1 311 399 230 321 4.99e-16 80.1
Msa0953060 AT5G45050.4 38.182 110 66 2 300 409 1002 1109 5.29e-16 82.4
Msa0953060 AT5G45050.1 38.182 110 66 2 300 409 1141 1248 6.14e-16 82.0
Msa0953060 AT3G04670.1 35.593 118 62 3 285 399 215 321 6.76e-16 79.7
Msa0953060 AT5G45050.2 38.182 110 66 2 300 409 1113 1220 6.77e-16 82.0
Msa0953060 AT2G23320.1 42.353 85 46 1 316 397 213 297 1.71e-15 78.2
Msa0953060 AT4G31550.2 33.607 122 58 3 302 405 194 310 1.00e-14 75.9
Msa0953060 AT4G31550.1 33.333 123 58 3 302 405 194 311 1.54e-14 75.5
Msa0953060 AT4G24240.1 41.176 85 47 1 316 397 254 338 2.77e-14 75.1
Msa0953060 AT3G58710.1 46.970 66 35 0 341 406 72 137 2.80e-14 73.9
Msa0953060 AT3G58710.2 46.970 66 35 0 341 406 71 136 3.00e-14 73.6
Msa0953060 AT2G24570.1 35.714 98 44 2 321 399 205 302 5.26e-14 73.6
Msa0953060 AT1G29280.1 48.333 60 31 0 341 400 75 134 7.63e-14 72.4
Msa0953060 AT2G03340.1 43.478 69 38 1 338 406 413 480 1.85e-13 73.6
Msa0953060 AT2G30590.1 38.636 88 46 1 312 399 293 372 6.96e-13 70.9
Msa0953060 AT5G43290.1 41.096 73 42 1 325 397 99 170 1.07e-12 68.9
Msa0953060 AT3G01080.2 42.857 63 35 1 338 400 342 403 1.39e-12 70.5
Msa0953060 AT3G01080.1 42.857 63 35 1 338 400 304 365 1.43e-12 70.1
Msa0953060 AT1G80840.1 45.161 62 34 0 340 401 146 207 1.93e-12 68.9
Msa0953060 AT2G04880.2 44.444 63 34 1 341 403 284 345 4.76e-12 68.9
Msa0953060 AT2G04880.1 44.444 63 34 1 341 403 308 369 4.90e-12 68.9
Msa0953060 AT5G07100.1 46.970 66 34 1 335 400 112 176 4.96e-12 67.8
Msa0953060 AT5G07100.2 46.970 66 34 1 335 400 19 83 5.74e-12 65.9
Msa0953060 AT5G07100.4 46.970 66 34 1 335 400 19 83 5.74e-12 65.9
Msa0953060 AT5G07100.5 46.970 66 34 1 335 400 19 83 5.74e-12 65.9
Msa0953060 AT5G07100.3 46.970 66 34 1 335 400 19 83 5.74e-12 65.9
Msa0953060 AT5G45260.1 41.538 65 36 1 341 403 1209 1273 8.58e-12 68.9
Msa0953060 AT1G13960.1 42.857 63 35 1 338 400 407 468 9.20e-12 68.2
Msa0953060 AT1G13960.2 42.857 63 35 1 338 400 254 315 9.72e-12 67.4
Msa0953060 AT4G26640.7 41.026 78 43 3 338 414 169 244 1.69e-11 67.4
Msa0953060 AT4G26640.2 41.026 78 43 3 338 414 209 284 1.80e-11 67.4
Msa0953060 AT4G26640.1 41.026 78 43 3 338 414 137 212 1.90e-11 67.0
Msa0953060 AT4G31800.2 42.667 75 40 1 340 411 111 185 1.95e-11 64.7
Msa0953060 AT4G26640.5 41.026 78 43 3 338 414 33 108 2.16e-11 66.2
Msa0953060 AT4G26640.6 41.026 78 43 3 338 414 33 108 2.16e-11 66.2
Msa0953060 AT4G26640.4 41.026 78 43 3 338 414 33 108 2.16e-11 66.2
Msa0953060 AT4G26640.3 41.026 78 43 3 338 414 33 108 2.16e-11 66.2
Msa0953060 AT4G30935.1 31.034 116 74 4 289 403 283 393 2.36e-11 66.6
Msa0953060 AT1G29860.1 43.548 62 34 1 340 401 136 196 4.84e-11 64.3
Msa0953060 AT4G31800.1 42.667 75 40 1 340 411 176 250 5.08e-11 64.7
Msa0953060 AT2G25000.2 45.902 61 33 0 340 400 103 163 5.38e-11 63.2
Msa0953060 AT2G25000.4 45.902 61 33 0 340 400 103 163 5.38e-11 63.2
Msa0953060 AT1G68150.1 27.465 142 77 2 261 402 182 297 5.67e-11 65.1
Msa0953060 AT5G56270.1 39.062 64 38 1 340 403 487 549 5.69e-11 65.9
Msa0953060 AT2G25000.3 45.902 61 33 0 340 400 125 185 5.80e-11 63.5
Msa0953060 AT2G21900.1 45.161 62 33 1 340 401 109 169 6.86e-11 62.4
Msa0953060 AT4G18170.1 44.828 58 31 1 340 397 172 228 7.45e-11 63.9
Msa0953060 AT2G37260.3 43.103 58 32 1 340 397 269 325 9.02e-11 64.3
Msa0953060 AT2G37260.2 43.103 58 32 1 340 397 267 323 9.49e-11 63.9

Find 143 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCAGGAAACAAACTTAT+TGG 0.153110 6_3:-48447580 Msa0953060:CDS
TTTCTCTAGCAGCAGGTAAA+TGG 0.191301 6_3:+48447716 None:intergenic
ATAAGTTCAGTTTCTGAATA+AGG 0.191932 6_3:+48447745 None:intergenic
TGTGATTGATTGAGCTTTCT+TGG 0.276762 6_3:+48449019 None:intergenic
TGGTGGTCGTGGACAAAATA+TGG 0.290490 6_3:-48448753 Msa0953060:CDS
TAGTCTTTGATGACTTGTTC+TGG 0.291346 6_3:+48447899 None:intergenic
TTGAGGTGATATGACATTAT+TGG 0.291683 6_3:+48449747 None:intergenic
TATGTCAGAGGATTTCTTAT+TGG 0.311118 6_3:-48447512 Msa0953060:CDS
TAAGTTCAGTTTCTGAATAA+GGG 0.317166 6_3:+48447746 None:intergenic
GGTACGAGGATTGAAATTAT+TGG 0.325131 6_3:+48449321 None:intergenic
TTGGTAGGCGTGGGGTTAAC+AGG 0.331361 6_3:+48449340 None:intergenic
AGTGGTGGTAGTTGGGATGG+GGG 0.353665 6_3:+48449585 None:intergenic
TAGTGGTGGTAGTTGGGATG+GGG 0.353957 6_3:+48449584 None:intergenic
TCATGGGAGTCGGTCTAGTT+GGG 0.360487 6_3:+48449281 None:intergenic
GTGATTGATTGAGCTTTCTT+GGG 0.361329 6_3:+48449020 None:intergenic
TAGTGGTGCTTGAAGGGGTT+TGG 0.367013 6_3:+48449515 None:intergenic
AGTCTTTGATGACTTGTTCT+GGG 0.370924 6_3:+48447900 None:intergenic
CTCCAATGGACATTGACAAA+TGG 0.371471 6_3:-48449885 None:intergenic
AGCATCATCACTAGTGTTCA+TGG 0.371510 6_3:-48449166 Msa0953060:CDS
CAAACAAGCTTTCAGAAGAT+TGG 0.373192 6_3:-48448773 Msa0953060:CDS
TTGGTGTTTGAGATGGAGAT+GGG 0.375368 6_3:+48449794 None:intergenic
GTCATGGGAGTCGGTCTAGT+TGG 0.376046 6_3:+48449280 None:intergenic
TTGGGATAGTGGTGGTAGTT+GGG 0.378553 6_3:+48449578 None:intergenic
GGGTTTGGATAATAGTGATT+GGG 0.385706 6_3:+48449530 None:intergenic
GCAAAACATAATTCAAGAAT+CGG 0.387484 6_3:-48448941 Msa0953060:CDS
GGTGGAGGTGGTGGTGATAG+TGG 0.392003 6_3:+48449771 None:intergenic
ATTATTGGTGGTGGAGGTGG+TGG 0.403407 6_3:+48449762 None:intergenic
GTCAAGTTGGTGGTGGAGCT+AGG 0.405598 6_3:+48449190 None:intergenic
AATTAACAACAAGGTAACTT+TGG 0.407679 6_3:-48448811 Msa0953060:CDS
GACATTATTGGTGGTGGAGG+TGG 0.407766 6_3:+48449759 None:intergenic
ATGGAGAGAGGTGGTGGGAT+TGG 0.408785 6_3:+48449609 None:intergenic
AATTACCCAACACCAGATCT+AGG 0.412137 6_3:-48448991 Msa0953060:CDS
ATAGTGGTGGTAGTTGGGAT+GGG 0.414168 6_3:+48449583 None:intergenic
GAACCCAGCTTTGAAATGTT+TGG 0.416902 6_3:+48447844 None:intergenic
GTGATTCACCGGAGTAATCA+TGG 0.421109 6_3:+48447611 None:intergenic
ATTCCCGACCACATAACATT+TGG 0.422243 6_3:-48449493 Msa0953060:CDS
CAACAAGAAATGCAATCAAA+TGG 0.425635 6_3:-48449397 Msa0953060:CDS
CGGGAATAGTGGTGCTTGAA+GGG 0.427793 6_3:+48449509 None:intergenic
GTTGGGATAGTGGTGGTAGT+TGG 0.427972 6_3:+48449577 None:intergenic
GAATCACAAATCCTTCCTTC+AGG 0.431729 6_3:-48447595 Msa0953060:CDS
CACAACAAAAGTGTCCTCTT+TGG 0.441667 6_3:+48447987 None:intergenic
TCGGGAATAGTGGTGCTTGA+AGG 0.441683 6_3:+48449508 None:intergenic
TCCAATGGACATTGACAAAT+GGG 0.445247 6_3:-48449884 None:intergenic
TGTAATGAAGGTTGGGATAG+TGG 0.449196 6_3:+48449567 None:intergenic
GTCACCAAACATTTCAAAGC+TGG 0.449524 6_3:-48447848 Msa0953060:CDS
AACACTTGAATGTTATTGTT+TGG 0.451693 6_3:+48449082 None:intergenic
TTCTCTAGCAGCAGGTAAAT+GGG 0.451842 6_3:+48447717 None:intergenic
ACTTGAATATTCCTGCTCTC+TGG 0.454557 6_3:+48447790 None:intergenic
GTTGGTGTTTGAGATGGAGA+TGG 0.454612 6_3:+48449793 None:intergenic
GATAGTGGTGGTAGTTGGGA+TGG 0.455456 6_3:+48449582 None:intergenic
GCAGGTAAATGGAACTCTAT+TGG 0.471063 6_3:-48447931 Msa0953060:CDS
GGGGTTTGGATAATAGTGAT+TGG 0.471326 6_3:+48449529 None:intergenic
ATTTGGTAAAATCCTAGATC+TGG 0.472878 6_3:+48448979 None:intergenic
TGAAGTGGTTGTTGTAATGA+AGG 0.473451 6_3:+48449555 None:intergenic
GTACCAAATGTTATGTGGTC+GGG 0.477811 6_3:+48449490 None:intergenic
TTGGTAGTGGTCATGGGAGT+CGG 0.484076 6_3:+48449271 None:intergenic
CAGGGTTATTGTCTTGAGAA+AGG 0.484625 6_3:+48449692 None:intergenic
TCCCATTTGTCAATGTCCAT+TGG 0.485177 6_3:+48449883 None:intergenic
TGGTTGTTGTAATGAAGGTT+GGG 0.486986 6_3:+48449560 None:intergenic
ATAGAGTTCCATTTACCTGC+TGG 0.487185 6_3:+48447934 None:intergenic
CAAAACATAATTCAAGAATC+GGG 0.489328 6_3:-48448940 Msa0953060:intron
GTCGGTCTAGTTGGGGTACA+AGG 0.490844 6_3:+48449289 None:intergenic
TCATGGGCATTGCTACTCAT+TGG 0.492500 6_3:+48447628 None:intergenic
TGTTATGTGGTCGGGAATAG+TGG 0.492886 6_3:+48449498 None:intergenic
GATTCAATTTCTCTAGCAGC+AGG 0.497334 6_3:+48447709 None:intergenic
GTGGTTGTTGTAATGAAGGT+TGG 0.498936 6_3:+48449559 None:intergenic
GAAGGTGTTGGTAGTGGTCA+TGG 0.499188 6_3:+48449264 None:intergenic
GGGGTTTCAATAAAAGAGGC+GGG 0.502543 6_3:+48449814 None:intergenic
GAGTATTGCATAATCTGAAA+TGG 0.502919 6_3:+48449126 None:intergenic
AACAAGAAATGCAATCAAAT+GGG 0.503558 6_3:-48449396 Msa0953060:CDS
GAGGTGGTGGTGATAGTGGT+TGG 0.506358 6_3:+48449775 None:intergenic
GTGGTGGAGCTAGGGCTAAT+AGG 0.510314 6_3:+48449199 None:intergenic
TTGAAATTATTGGTAGGCGT+GGG 0.511388 6_3:+48449331 None:intergenic
AAAAGAGGCGGGGTTAGTAA+AGG 0.516494 6_3:+48449825 None:intergenic
TCTTGTTGTTCGATAAGTGT+TGG 0.517204 6_3:+48449412 None:intergenic
TAAGTTTGTTTCCTGAAGGA+AGG 0.517251 6_3:+48447584 None:intergenic
TCACCAAACATTTCAAAGCT+GGG 0.518423 6_3:-48447847 Msa0953060:CDS
AAAATCCTAGATCTGGTGTT+GGG 0.521031 6_3:+48448986 None:intergenic
GTTAGCGAAGGTGTTGGTAG+TGG 0.522503 6_3:+48449258 None:intergenic
AAGACTAGATTACCCGCTGT+TGG 0.528458 6_3:-48447883 Msa0953060:CDS
TAAGGGATTTCTGATTGACT+AGG 0.529361 6_3:+48447763 None:intergenic
CCAATAAGTTTGTTTCCTGA+AGG 0.534237 6_3:+48447580 None:intergenic
TCAAGTTGGTGGTGGAGCTA+GGG 0.536928 6_3:+48449191 None:intergenic
ATTCCACCATTGTACTTCGA+TGG 0.541129 6_3:-48449721 Msa0953060:CDS
TGATATGACATTATTGGTGG+TGG 0.543806 6_3:+48449753 None:intergenic
AGGAAGGATTTGTGATTCAC+CGG 0.548075 6_3:+48447600 None:intergenic
TGGTGTTTGAGATGGAGATG+GGG 0.548223 6_3:+48449795 None:intergenic
AAGGGATTTCTGATTGACTA+GGG 0.549712 6_3:+48447764 None:intergenic
GGTTTGGATAATAGTGATTG+GGG 0.549958 6_3:+48449531 None:intergenic
AGCCTTGTTGCTATTGACAA+AGG 0.551037 6_3:+48449852 None:intergenic
TGAAATGGTACGATATTGAC+TGG 0.556083 6_3:+48449141 None:intergenic
CATGGGAGTCGGTCTAGTTG+GGG 0.559568 6_3:+48449282 None:intergenic
GACTTGAAATTTCCAACAGC+GGG 0.560025 6_3:+48447871 None:intergenic
TCTGACATATCAGTCATGCT+TGG 0.560481 6_3:+48447526 None:intergenic
ACAAGCTTTCAGAAGATTGG+TGG 0.561395 6_3:-48448770 Msa0953060:CDS
TGATTCACCGGAGTAATCAT+GGG 0.561593 6_3:+48447612 None:intergenic
TGATTGATTGAGCTTTCTTG+GGG 0.561989 6_3:+48449021 None:intergenic
GGGAATAGTGGTGCTTGAAG+GGG 0.562869 6_3:+48449510 None:intergenic
AGGTGATATGACATTATTGG+TGG 0.566392 6_3:+48449750 None:intergenic
ATTGAAATTATTGGTAGGCG+TGG 0.569218 6_3:+48449330 None:intergenic
GGGGCATGGAGAGAGGTGGT+GGG 0.569845 6_3:+48449604 None:intergenic
ATAGTGGTTGGTGTTTGAGA+TGG 0.570849 6_3:+48449787 None:intergenic
ATGTCGATCATCCAGAGAGC+AGG 0.571282 6_3:-48447801 Msa0953060:CDS
AGTTGTTGTGGGGTTAGCGA+AGG 0.571858 6_3:+48449246 None:intergenic
TTTCAGAAGATTGGTGGTCG+TGG 0.572428 6_3:-48448764 Msa0953060:CDS
AAGGTGTTGGTAGTGGTCAT+GGG 0.574401 6_3:+48449265 None:intergenic
TAAAATCCTAGATCTGGTGT+TGG 0.574409 6_3:+48448985 None:intergenic
CGAGGATTGAAATTATTGGT+AGG 0.574794 6_3:+48449325 None:intergenic
AAAGCTTGTTTGTTCTCACA+TGG 0.575398 6_3:+48448784 None:intergenic
AATAGTGATTGGGGATGAAG+TGG 0.575835 6_3:+48449540 None:intergenic
ATGTGAAAAGACCTTGGATG+TGG 0.577521 6_3:+48448708 None:intergenic
TATGACATTATTGGTGGTGG+AGG 0.581839 6_3:+48449756 None:intergenic
AGATGGGGTTTCAATAAAAG+AGG 0.589549 6_3:+48449810 None:intergenic
AGTGATGATGCTAGTCAAGT+TGG 0.591738 6_3:+48449177 None:intergenic
GGTAAATGGAACTCTATTGG+TGG 0.596193 6_3:-48447928 Msa0953060:CDS
TGATTGTACCAAATGTTATG+TGG 0.605424 6_3:+48449485 None:intergenic
TGTGGGGTTAGCGAAGGTGT+TGG 0.606403 6_3:+48449252 None:intergenic
CTAATAGGTCCAGTAGTGGT+CGG 0.607958 6_3:+48449214 None:intergenic
GATGCTAGTCAAGTTGGTGG+TGG 0.611563 6_3:+48449183 None:intergenic
CTTTGATGACTTGTTCTGGG+AGG 0.611922 6_3:+48447903 None:intergenic
TTCCTTTGTCAATAGCAACA+AGG 0.614355 6_3:-48449854 Msa0953060:CDS
GTAAATGGAACTCTATTGGT+GGG 0.619020 6_3:-48447927 Msa0953060:CDS
GAAATAGAAAACCATCATTG+AGG 0.620026 6_3:+48447479 None:intergenic
TTGGGGTACAAGGAGTAGTG+AGG 0.620437 6_3:+48449299 None:intergenic
CAAGGAGTAGTGAGGGTACG+AGG 0.620562 6_3:+48449307 None:intergenic
TTAGCGGGTCCCCACATCCA+AGG 0.623038 6_3:-48448719 Msa0953060:intron
TGAAATTATTGGTAGGCGTG+GGG 0.623408 6_3:+48449332 None:intergenic
TGGGGTACAAGGAGTAGTGA+GGG 0.623411 6_3:+48449300 None:intergenic
AGCAATGCCCATGATTACTC+CGG 0.626209 6_3:-48447619 Msa0953060:CDS
GATGATGCTAGTCAAGTTGG+TGG 0.628378 6_3:+48449180 None:intergenic
TGTGAAAAGACCTTGGATGT+GGG 0.630725 6_3:+48448709 None:intergenic
TGTACCAAATGTTATGTGGT+CGG 0.633920 6_3:+48449489 None:intergenic
GTGAAAAGACCTTGGATGTG+GGG 0.637723 6_3:+48448710 None:intergenic
AAACCATCGAAGTACAATGG+TGG 0.638547 6_3:+48449718 None:intergenic
TGGGGTTTCAATAAAAGAGG+CGG 0.641388 6_3:+48449813 None:intergenic
ATAGAAAACCATCATTGAGG+TGG 0.645904 6_3:+48447482 None:intergenic
CTAAAACCATCGAAGTACAA+TGG 0.654690 6_3:+48449715 None:intergenic
AAGCATGACTGATATGTCAG+AGG 0.660878 6_3:-48447524 Msa0953060:CDS
CGACTTGAAATTTCCAACAG+CGG 0.670165 6_3:+48447870 None:intergenic
AGGGCTAATAGGTCCAGTAG+TGG 0.675550 6_3:+48449210 None:intergenic
GATTGATTGAGCTTTCTTGG+GGG 0.688353 6_3:+48449022 None:intergenic
GGGTTTCAATAAAAGAGGCG+GGG 0.696209 6_3:+48449815 None:intergenic
AATGAAGGTTGGGATAGTGG+TGG 0.722924 6_3:+48449570 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAAATTAATGTATTTT+TGG - chr6_3:48448942-48448961 Msa0953060:CDS 10.0%
!!! TATCAAAATTAATGTATTTT+TGG - chr6_3:48448942-48448961 Msa0953060:CDS 10.0%
!! AACAAGTAGAAAAAATAAAA+AGG + chr6_3:48449050-48449069 None:intergenic 15.0%
!! AACAAGTAGAAAAAATAAAA+AGG + chr6_3:48449050-48449069 None:intergenic 15.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_3:48447698-48447717 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_3:48447699-48447718 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_3:48448534-48448553 Msa0953060:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_3:48448958-48448977 Msa0953060:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_3:48449003-48449022 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+TGG + chr6_3:48449117-48449136 None:intergenic 20.0%
!! ACTAAAAATATCTGTGTATT+TGG + chr6_3:48449207-48449226 None:intergenic 20.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_3:48447698-48447717 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_3:48447699-48447718 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_3:48448534-48448553 Msa0953060:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_3:48448958-48448977 Msa0953060:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_3:48449003-48449022 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+TGG + chr6_3:48449117-48449136 None:intergenic 20.0%
!! ACTAAAAATATCTGTGTATT+TGG + chr6_3:48449207-48449226 None:intergenic 20.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_3:48447697-48447716 None:intergenic 25.0%
! AACAAGAAATGCAATCAAAT+GGG - chr6_3:48447958-48447977 Msa0953060:CDS 25.0%
! AACACTTGAATGTTATTGTT+TGG + chr6_3:48448275-48448294 None:intergenic 25.0%
! GCAAAACATAATTCAAGAAT+CGG - chr6_3:48448413-48448432 Msa0953060:intron 25.0%
! CAAAACATAATTCAAGAATC+GGG - chr6_3:48448414-48448433 Msa0953060:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_3:48448543-48448562 Msa0953060:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_3:48448619-48448638 Msa0953060:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_3:48448732-48448751 Msa0953060:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_3:48449143-48449162 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_3:48449145-48449164 Msa0953060:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_3:48449146-48449165 Msa0953060:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_3:48449241-48449260 Msa0953060:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_3:48449280-48449299 Msa0953060:CDS 25.0%
! TAAGTTCAGTTTCTGAATAA+GGG + chr6_3:48449611-48449630 None:intergenic 25.0%
! ATAAGTTCAGTTTCTGAATA+AGG + chr6_3:48449612-48449631 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_3:48449675-48449694 None:intergenic 25.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_3:48447697-48447716 None:intergenic 25.0%
! AACAAGAAATGCAATCAAAT+GGG - chr6_3:48447958-48447977 Msa0953060:CDS 25.0%
! AACACTTGAATGTTATTGTT+TGG + chr6_3:48448275-48448294 None:intergenic 25.0%
! GCAAAACATAATTCAAGAAT+CGG - chr6_3:48448413-48448432 Msa0953060:intron 25.0%
! CAAAACATAATTCAAGAATC+GGG - chr6_3:48448414-48448433 Msa0953060:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_3:48448543-48448562 Msa0953060:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_3:48448619-48448638 Msa0953060:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_3:48448732-48448751 Msa0953060:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_3:48449143-48449162 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_3:48449145-48449164 Msa0953060:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_3:48449146-48449165 Msa0953060:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_3:48449241-48449260 Msa0953060:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_3:48449280-48449299 Msa0953060:CDS 25.0%
! TAAGTTCAGTTTCTGAATAA+GGG + chr6_3:48449611-48449630 None:intergenic 25.0%
! ATAAGTTCAGTTTCTGAATA+AGG + chr6_3:48449612-48449631 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_3:48449675-48449694 None:intergenic 25.0%
TTGAGGTGATATGACATTAT+TGG + chr6_3:48447610-48447629 None:intergenic 30.0%
!! TACAATGGTGGAATATTTTG+AGG + chr6_3:48447627-48447646 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_3:48447690-48447709 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_3:48447872-48447891 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_3:48447931-48447950 None:intergenic 30.0%
CAACAAGAAATGCAATCAAA+TGG - chr6_3:48447957-48447976 Msa0953060:CDS 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_3:48448231-48448250 None:intergenic 30.0%
ATTTGGTAAAATCCTAGATC+TGG + chr6_3:48448378-48448397 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+TGG + chr6_3:48448395-48448414 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_3:48448620-48448639 Msa0953060:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_3:48448655-48448674 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_3:48448731-48448750 Msa0953060:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_3:48448745-48448764 Msa0953060:CDS 30.0%
TTGAAACACAAACAAAACCT+AGG + chr6_3:48448816-48448835 None:intergenic 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_3:48449136-48449155 None:intergenic 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_3:48449842-48449861 Msa0953060:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_3:48449878-48449897 None:intergenic 30.0%
TTGAGGTGATATGACATTAT+TGG + chr6_3:48447610-48447629 None:intergenic 30.0%
!! TACAATGGTGGAATATTTTG+AGG + chr6_3:48447627-48447646 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_3:48447690-48447709 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_3:48447872-48447891 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_3:48447931-48447950 None:intergenic 30.0%
CAACAAGAAATGCAATCAAA+TGG - chr6_3:48447957-48447976 Msa0953060:CDS 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_3:48448231-48448250 None:intergenic 30.0%
ATTTGGTAAAATCCTAGATC+TGG + chr6_3:48448378-48448397 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+TGG + chr6_3:48448395-48448414 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_3:48448620-48448639 Msa0953060:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_3:48448655-48448674 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_3:48448731-48448750 Msa0953060:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_3:48448745-48448764 Msa0953060:CDS 30.0%
TTGAAACACAAACAAAACCT+AGG + chr6_3:48448816-48448835 None:intergenic 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_3:48449136-48449155 None:intergenic 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_3:48449842-48449861 Msa0953060:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_3:48449878-48449897 None:intergenic 30.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_3:48447500-48447519 Msa0953060:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_3:48447547-48447566 None:intergenic 35.0%
TGATATGACATTATTGGTGG+TGG + chr6_3:48447604-48447623 None:intergenic 35.0%
AGGTGATATGACATTATTGG+TGG + chr6_3:48447607-48447626 None:intergenic 35.0%
CTAAAACCATCGAAGTACAA+TGG + chr6_3:48447642-48447661 None:intergenic 35.0%
TGGTTGTTGTAATGAAGGTT+GGG + chr6_3:48447797-48447816 None:intergenic 35.0%
TGAAGTGGTTGTTGTAATGA+AGG + chr6_3:48447802-48447821 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_3:48447826-48447845 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_3:48447827-48447846 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_3:48447868-48447887 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_3:48447927-48447946 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_3:48447928-48447947 None:intergenic 35.0%
!! TCTTGTTGTTCGATAAGTGT+TGG + chr6_3:48447945-48447964 None:intergenic 35.0%
TTGAAATTATTGGTAGGCGT+GGG + chr6_3:48448026-48448045 None:intergenic 35.0%
ATTGAAATTATTGGTAGGCG+TGG + chr6_3:48448027-48448046 None:intergenic 35.0%
CGAGGATTGAAATTATTGGT+AGG + chr6_3:48448032-48448051 None:intergenic 35.0%
GGTACGAGGATTGAAATTAT+TGG + chr6_3:48448036-48448055 None:intergenic 35.0%
GAGTGAAAAAAGTTGTTGTG+GGG + chr6_3:48448121-48448140 None:intergenic 35.0%
GGAGTGAAAAAAGTTGTTGT+GGG + chr6_3:48448122-48448141 None:intergenic 35.0%
TGAAATGGTACGATATTGAC+TGG + chr6_3:48448216-48448235 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_3:48448336-48448355 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_3:48448337-48448356 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_3:48448338-48448357 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_3:48448371-48448390 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_3:48448372-48448391 None:intergenic 35.0%
! AAAGCTTGTTTGTTCTCACA+TGG + chr6_3:48448573-48448592 None:intergenic 35.0%
CAAACAAGCTTTCAGAAGAT+TGG - chr6_3:48448581-48448600 Msa0953060:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_3:48448751-48448770 None:intergenic 35.0%
TAAGACCACAATTAGTGCAA+TGG + chr6_3:48448792-48448811 None:intergenic 35.0%
! ACTAATTGTGGTCTTAACCT+AGG - chr6_3:48448796-48448815 Msa0953060:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_3:48449149-48449168 Msa0953060:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_3:48449150-48449169 Msa0953060:CDS 35.0%
ACAAAAAAGTGACACCAAAG+AGG - chr6_3:48449353-48449372 Msa0953060:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_3:48449378-48449397 Msa0953060:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_3:48449413-48449432 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_3:48449412-48449431 Msa0953060:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_3:48449427-48449446 Msa0953060:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_3:48449457-48449476 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_3:48449458-48449477 None:intergenic 35.0%
TCACCAAACATTTCAAAGCT+GGG - chr6_3:48449507-48449526 Msa0953060:CDS 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_3:48449593-48449612 None:intergenic 35.0%
TAAGGGATTTCTGATTGACT+AGG + chr6_3:48449594-48449613 None:intergenic 35.0%
! TAAGTTTGTTTCCTGAAGGA+AGG + chr6_3:48449773-48449792 None:intergenic 35.0%
! CCAATAAGTTTGTTTCCTGA+AGG + chr6_3:48449777-48449796 None:intergenic 35.0%
CCTTCAGGAAACAAACTTAT+TGG - chr6_3:48449774-48449793 Msa0953060:CDS 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_3:48449875-48449894 None:intergenic 35.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_3:48447500-48447519 Msa0953060:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_3:48447547-48447566 None:intergenic 35.0%
TGATATGACATTATTGGTGG+TGG + chr6_3:48447604-48447623 None:intergenic 35.0%
AGGTGATATGACATTATTGG+TGG + chr6_3:48447607-48447626 None:intergenic 35.0%
CTAAAACCATCGAAGTACAA+TGG + chr6_3:48447642-48447661 None:intergenic 35.0%
TGGTTGTTGTAATGAAGGTT+GGG + chr6_3:48447797-48447816 None:intergenic 35.0%
TGAAGTGGTTGTTGTAATGA+AGG + chr6_3:48447802-48447821 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_3:48447826-48447845 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_3:48447827-48447846 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_3:48447868-48447887 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_3:48447927-48447946 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_3:48447928-48447947 None:intergenic 35.0%
!! TCTTGTTGTTCGATAAGTGT+TGG + chr6_3:48447945-48447964 None:intergenic 35.0%
TTGAAATTATTGGTAGGCGT+GGG + chr6_3:48448026-48448045 None:intergenic 35.0%
ATTGAAATTATTGGTAGGCG+TGG + chr6_3:48448027-48448046 None:intergenic 35.0%
CGAGGATTGAAATTATTGGT+AGG + chr6_3:48448032-48448051 None:intergenic 35.0%
GGTACGAGGATTGAAATTAT+TGG + chr6_3:48448036-48448055 None:intergenic 35.0%
GAGTGAAAAAAGTTGTTGTG+GGG + chr6_3:48448121-48448140 None:intergenic 35.0%
GGAGTGAAAAAAGTTGTTGT+GGG + chr6_3:48448122-48448141 None:intergenic 35.0%
TGAAATGGTACGATATTGAC+TGG + chr6_3:48448216-48448235 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_3:48448336-48448355 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_3:48448337-48448356 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_3:48448338-48448357 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_3:48448371-48448390 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_3:48448372-48448391 None:intergenic 35.0%
! AAAGCTTGTTTGTTCTCACA+TGG + chr6_3:48448573-48448592 None:intergenic 35.0%
CAAACAAGCTTTCAGAAGAT+TGG - chr6_3:48448581-48448600 Msa0953060:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_3:48448751-48448770 None:intergenic 35.0%
TAAGACCACAATTAGTGCAA+TGG + chr6_3:48448792-48448811 None:intergenic 35.0%
! ACTAATTGTGGTCTTAACCT+AGG - chr6_3:48448796-48448815 Msa0953060:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_3:48449149-48449168 Msa0953060:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_3:48449150-48449169 Msa0953060:CDS 35.0%
ACAAAAAAGTGACACCAAAG+AGG - chr6_3:48449353-48449372 Msa0953060:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_3:48449378-48449397 Msa0953060:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_3:48449413-48449432 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_3:48449412-48449431 Msa0953060:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_3:48449427-48449446 Msa0953060:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_3:48449457-48449476 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_3:48449458-48449477 None:intergenic 35.0%
TCACCAAACATTTCAAAGCT+GGG - chr6_3:48449507-48449526 Msa0953060:CDS 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_3:48449593-48449612 None:intergenic 35.0%
TAAGGGATTTCTGATTGACT+AGG + chr6_3:48449594-48449613 None:intergenic 35.0%
! TAAGTTTGTTTCCTGAAGGA+AGG + chr6_3:48449773-48449792 None:intergenic 35.0%
! CCAATAAGTTTGTTTCCTGA+AGG + chr6_3:48449777-48449796 None:intergenic 35.0%
CCTTCAGGAAACAAACTTAT+TGG - chr6_3:48449774-48449793 Msa0953060:CDS 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_3:48449875-48449894 None:intergenic 35.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_3:48447505-48447524 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_3:48447544-48447563 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_3:48447563-48447582 None:intergenic 40.0%
! ATAGTGGTTGGTGTTTGAGA+TGG + chr6_3:48447570-48447589 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_3:48447601-48447620 None:intergenic 40.0%
ATTCCACCATTGTACTTCGA+TGG - chr6_3:48447633-48447652 Msa0953060:CDS 40.0%
AAACCATCGAAGTACAATGG+TGG + chr6_3:48447639-48447658 None:intergenic 40.0%
CAGGGTTATTGTCTTGAGAA+AGG + chr6_3:48447665-48447684 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_3:48447683-48447702 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_3:48447684-48447703 None:intergenic 40.0%
TGTAATGAAGGTTGGGATAG+TGG + chr6_3:48447790-48447809 None:intergenic 40.0%
GTGGTTGTTGTAATGAAGGT+TGG + chr6_3:48447798-48447817 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_3:48447817-48447836 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_3:48447828-48447847 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_3:48447861-48447880 Msa0953060:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_3:48447867-48447886 None:intergenic 40.0%
TGAAATTATTGGTAGGCGTG+GGG + chr6_3:48448025-48448044 None:intergenic 40.0%
CGGAGTGAAAAAAGTTGTTG+TGG + chr6_3:48448123-48448142 None:intergenic 40.0%
! AGTGATGATGCTAGTCAAGT+TGG + chr6_3:48448180-48448199 None:intergenic 40.0%
AGCATCATCACTAGTGTTCA+TGG - chr6_3:48448188-48448207 Msa0953060:intron 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_3:48448335-48448354 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_3:48448363-48448382 Msa0953060:intron 40.0%
ACAAGCTTTCAGAAGATTGG+TGG - chr6_3:48448584-48448603 Msa0953060:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_3:48448648-48448667 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_3:48448649-48448668 None:intergenic 40.0%
AATTAGTGCAATGGCAAGGA+TGG + chr6_3:48448783-48448802 None:intergenic 40.0%
!! CACAACAAAAGTGTCCTCTT+TGG + chr6_3:48449370-48449389 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_3:48449423-48449442 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_3:48449423-48449442 Msa0953060:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_3:48449426-48449445 Msa0953060:CDS 40.0%
GACTTGAAATTTCCAACAGC+GGG + chr6_3:48449486-48449505 None:intergenic 40.0%
CGACTTGAAATTTCCAACAG+CGG + chr6_3:48449487-48449506 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+TGG - chr6_3:48449506-48449525 Msa0953060:CDS 40.0%
!! GAACCCAGCTTTGAAATGTT+TGG + chr6_3:48449513-48449532 None:intergenic 40.0%
ACTTGAATATTCCTGCTCTC+TGG + chr6_3:48449567-48449586 None:intergenic 40.0%
TTCTCTAGCAGCAGGTAAAT+GGG + chr6_3:48449640-48449659 None:intergenic 40.0%
TTTCTCTAGCAGCAGGTAAA+TGG + chr6_3:48449641-48449660 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+AGG + chr6_3:48449648-48449667 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_3:48449745-48449764 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_3:48449757-48449776 None:intergenic 40.0%
GAATCACAAATCCTTCCTTC+AGG - chr6_3:48449759-48449778 Msa0953060:CDS 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_3:48449831-48449850 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_3:48449830-48449849 Msa0953060:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_3:48449864-48449883 Msa0953060:CDS 40.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_3:48447505-48447524 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_3:48447544-48447563 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_3:48447563-48447582 None:intergenic 40.0%
! ATAGTGGTTGGTGTTTGAGA+TGG + chr6_3:48447570-48447589 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_3:48447601-48447620 None:intergenic 40.0%
ATTCCACCATTGTACTTCGA+TGG - chr6_3:48447633-48447652 Msa0953060:CDS 40.0%
AAACCATCGAAGTACAATGG+TGG + chr6_3:48447639-48447658 None:intergenic 40.0%
CAGGGTTATTGTCTTGAGAA+AGG + chr6_3:48447665-48447684 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_3:48447683-48447702 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_3:48447684-48447703 None:intergenic 40.0%
TGTAATGAAGGTTGGGATAG+TGG + chr6_3:48447790-48447809 None:intergenic 40.0%
GTGGTTGTTGTAATGAAGGT+TGG + chr6_3:48447798-48447817 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_3:48447817-48447836 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_3:48447828-48447847 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_3:48447861-48447880 Msa0953060:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_3:48447867-48447886 None:intergenic 40.0%
TGAAATTATTGGTAGGCGTG+GGG + chr6_3:48448025-48448044 None:intergenic 40.0%
CGGAGTGAAAAAAGTTGTTG+TGG + chr6_3:48448123-48448142 None:intergenic 40.0%
! AGTGATGATGCTAGTCAAGT+TGG + chr6_3:48448180-48448199 None:intergenic 40.0%
AGCATCATCACTAGTGTTCA+TGG - chr6_3:48448188-48448207 Msa0953060:intron 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_3:48448335-48448354 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_3:48448363-48448382 Msa0953060:intron 40.0%
ACAAGCTTTCAGAAGATTGG+TGG - chr6_3:48448584-48448603 Msa0953060:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_3:48448648-48448667 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_3:48448649-48448668 None:intergenic 40.0%
AATTAGTGCAATGGCAAGGA+TGG + chr6_3:48448783-48448802 None:intergenic 40.0%
!! CACAACAAAAGTGTCCTCTT+TGG + chr6_3:48449370-48449389 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_3:48449423-48449442 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_3:48449423-48449442 Msa0953060:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_3:48449426-48449445 Msa0953060:CDS 40.0%
GACTTGAAATTTCCAACAGC+GGG + chr6_3:48449486-48449505 None:intergenic 40.0%
CGACTTGAAATTTCCAACAG+CGG + chr6_3:48449487-48449506 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+TGG - chr6_3:48449506-48449525 Msa0953060:CDS 40.0%
!! GAACCCAGCTTTGAAATGTT+TGG + chr6_3:48449513-48449532 None:intergenic 40.0%
ACTTGAATATTCCTGCTCTC+TGG + chr6_3:48449567-48449586 None:intergenic 40.0%
TTCTCTAGCAGCAGGTAAAT+GGG + chr6_3:48449640-48449659 None:intergenic 40.0%
TTTCTCTAGCAGCAGGTAAA+TGG + chr6_3:48449641-48449660 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+AGG + chr6_3:48449648-48449667 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_3:48449745-48449764 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_3:48449757-48449776 None:intergenic 40.0%
GAATCACAAATCCTTCCTTC+AGG - chr6_3:48449759-48449778 Msa0953060:CDS 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_3:48449831-48449850 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_3:48449830-48449849 Msa0953060:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_3:48449864-48449883 Msa0953060:CDS 40.0%
! AAAAGAGGCGGGGTTAGTAA+AGG + chr6_3:48447532-48447551 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_3:48447542-48447561 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_3:48447543-48447562 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_3:48447562-48447581 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_3:48447564-48447583 None:intergenic 45.0%
ATAGTGGTGGTAGTTGGGAT+GGG + chr6_3:48447774-48447793 None:intergenic 45.0%
! TTGGGATAGTGGTGGTAGTT+GGG + chr6_3:48447779-48447798 None:intergenic 45.0%
! AATGAAGGTTGGGATAGTGG+TGG + chr6_3:48447787-48447806 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_3:48447859-48447878 None:intergenic 45.0%
!! AAGGTGTTGGTAGTGGTCAT+GGG + chr6_3:48448092-48448111 None:intergenic 45.0%
! TTTTTCACTCCGACCACTAC+TGG - chr6_3:48448131-48448150 Msa0953060:intron 45.0%
CTAATAGGTCCAGTAGTGGT+CGG + chr6_3:48448143-48448162 None:intergenic 45.0%
!! GATGATGCTAGTCAAGTTGG+TGG + chr6_3:48448177-48448196 None:intergenic 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_3:48448590-48448609 Msa0953060:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_3:48448601-48448620 Msa0953060:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_3:48448647-48448666 None:intergenic 45.0%
CCACAATTAGTGCAATGGCA+AGG + chr6_3:48448787-48448806 None:intergenic 45.0%
CCTTGCCATTGCACTAATTG+TGG - chr6_3:48448784-48448803 Msa0953060:CDS 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_3:48449405-48449424 Msa0953060:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_3:48449454-48449473 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_3:48449471-48449490 Msa0953060:CDS 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_3:48449729-48449748 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_3:48449735-48449754 Msa0953060:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_3:48449746-48449765 None:intergenic 45.0%
! AAAAGAGGCGGGGTTAGTAA+AGG + chr6_3:48447532-48447551 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_3:48447542-48447561 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_3:48447543-48447562 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_3:48447562-48447581 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_3:48447564-48447583 None:intergenic 45.0%
ATAGTGGTGGTAGTTGGGAT+GGG + chr6_3:48447774-48447793 None:intergenic 45.0%
! TTGGGATAGTGGTGGTAGTT+GGG + chr6_3:48447779-48447798 None:intergenic 45.0%
! AATGAAGGTTGGGATAGTGG+TGG + chr6_3:48447787-48447806 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_3:48447859-48447878 None:intergenic 45.0%
!! AAGGTGTTGGTAGTGGTCAT+GGG + chr6_3:48448092-48448111 None:intergenic 45.0%
! TTTTTCACTCCGACCACTAC+TGG - chr6_3:48448131-48448150 Msa0953060:intron 45.0%
CTAATAGGTCCAGTAGTGGT+CGG + chr6_3:48448143-48448162 None:intergenic 45.0%
!! GATGATGCTAGTCAAGTTGG+TGG + chr6_3:48448177-48448196 None:intergenic 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_3:48448590-48448609 Msa0953060:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_3:48448601-48448620 Msa0953060:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_3:48448647-48448666 None:intergenic 45.0%
CCACAATTAGTGCAATGGCA+AGG + chr6_3:48448787-48448806 None:intergenic 45.0%
CCTTGCCATTGCACTAATTG+TGG - chr6_3:48448784-48448803 Msa0953060:CDS 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_3:48449405-48449424 Msa0953060:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_3:48449454-48449473 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_3:48449471-48449490 Msa0953060:CDS 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_3:48449729-48449748 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_3:48449735-48449754 Msa0953060:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_3:48449746-48449765 None:intergenic 45.0%
!!! TTAAGATAAATAAATTTTAT+TGG + chr6_3:48449086-48449105 None:intergenic 5.0%
!!! TTAAGATAAATAAATTTTAT+TGG + chr6_3:48449086-48449105 None:intergenic 5.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_3:48447595-48447614 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_3:48447598-48447617 None:intergenic 50.0%
TAGTGGTGGTAGTTGGGATG+GGG + chr6_3:48447773-48447792 None:intergenic 50.0%
! GATAGTGGTGGTAGTTGGGA+TGG + chr6_3:48447775-48447794 None:intergenic 50.0%
! GTTGGGATAGTGGTGGTAGT+TGG + chr6_3:48447780-48447799 None:intergenic 50.0%
TAGTGGTGCTTGAAGGGGTT+TGG + chr6_3:48447842-48447861 None:intergenic 50.0%
GGGAATAGTGGTGCTTGAAG+GGG + chr6_3:48447847-48447866 None:intergenic 50.0%
CGGGAATAGTGGTGCTTGAA+GGG + chr6_3:48447848-48447867 None:intergenic 50.0%
TCGGGAATAGTGGTGCTTGA+AGG + chr6_3:48447849-48447868 None:intergenic 50.0%
TGGGGTACAAGGAGTAGTGA+GGG + chr6_3:48448057-48448076 None:intergenic 50.0%
TTGGGGTACAAGGAGTAGTG+AGG + chr6_3:48448058-48448077 None:intergenic 50.0%
TCATGGGAGTCGGTCTAGTT+GGG + chr6_3:48448076-48448095 None:intergenic 50.0%
!! TTGGTAGTGGTCATGGGAGT+CGG + chr6_3:48448086-48448105 None:intergenic 50.0%
!! GAAGGTGTTGGTAGTGGTCA+TGG + chr6_3:48448093-48448112 None:intergenic 50.0%
!! GTTAGCGAAGGTGTTGGTAG+TGG + chr6_3:48448099-48448118 None:intergenic 50.0%
! AGTTGTTGTGGGGTTAGCGA+AGG + chr6_3:48448111-48448130 None:intergenic 50.0%
AGGGCTAATAGGTCCAGTAG+TGG + chr6_3:48448147-48448166 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGAGCTA+GGG + chr6_3:48448166-48448185 None:intergenic 50.0%
!! GATGCTAGTCAAGTTGGTGG+TGG + chr6_3:48448174-48448193 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_3:48448326-48448345 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_3:48449156-48449175 Msa0953060:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_3:48449157-48449176 Msa0953060:CDS 50.0%
ATGTCGATCATCCAGAGAGC+AGG - chr6_3:48449553-48449572 Msa0953060:CDS 50.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_3:48447595-48447614 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_3:48447598-48447617 None:intergenic 50.0%
TAGTGGTGGTAGTTGGGATG+GGG + chr6_3:48447773-48447792 None:intergenic 50.0%
! GATAGTGGTGGTAGTTGGGA+TGG + chr6_3:48447775-48447794 None:intergenic 50.0%
! GTTGGGATAGTGGTGGTAGT+TGG + chr6_3:48447780-48447799 None:intergenic 50.0%
TAGTGGTGCTTGAAGGGGTT+TGG + chr6_3:48447842-48447861 None:intergenic 50.0%
GGGAATAGTGGTGCTTGAAG+GGG + chr6_3:48447847-48447866 None:intergenic 50.0%
CGGGAATAGTGGTGCTTGAA+GGG + chr6_3:48447848-48447867 None:intergenic 50.0%
TCGGGAATAGTGGTGCTTGA+AGG + chr6_3:48447849-48447868 None:intergenic 50.0%
TGGGGTACAAGGAGTAGTGA+GGG + chr6_3:48448057-48448076 None:intergenic 50.0%
TTGGGGTACAAGGAGTAGTG+AGG + chr6_3:48448058-48448077 None:intergenic 50.0%
TCATGGGAGTCGGTCTAGTT+GGG + chr6_3:48448076-48448095 None:intergenic 50.0%
!! TTGGTAGTGGTCATGGGAGT+CGG + chr6_3:48448086-48448105 None:intergenic 50.0%
!! GAAGGTGTTGGTAGTGGTCA+TGG + chr6_3:48448093-48448112 None:intergenic 50.0%
!! GTTAGCGAAGGTGTTGGTAG+TGG + chr6_3:48448099-48448118 None:intergenic 50.0%
! AGTTGTTGTGGGGTTAGCGA+AGG + chr6_3:48448111-48448130 None:intergenic 50.0%
AGGGCTAATAGGTCCAGTAG+TGG + chr6_3:48448147-48448166 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGAGCTA+GGG + chr6_3:48448166-48448185 None:intergenic 50.0%
!! GATGCTAGTCAAGTTGGTGG+TGG + chr6_3:48448174-48448193 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_3:48448326-48448345 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_3:48449156-48449175 Msa0953060:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_3:48449157-48449176 Msa0953060:CDS 50.0%
ATGTCGATCATCCAGAGAGC+AGG - chr6_3:48449553-48449572 Msa0953060:CDS 50.0%
!! GAGGTGGTGGTGATAGTGGT+TGG + chr6_3:48447582-48447601 None:intergenic 55.0%
!! ATGGAGAGAGGTGGTGGGAT+TGG + chr6_3:48447748-48447767 None:intergenic 55.0%
AGTGGTGGTAGTTGGGATGG+GGG + chr6_3:48447772-48447791 None:intergenic 55.0%
TTGGTAGGCGTGGGGTTAAC+AGG + chr6_3:48448017-48448036 None:intergenic 55.0%
! CAAGGAGTAGTGAGGGTACG+AGG + chr6_3:48448050-48448069 None:intergenic 55.0%
GTCGGTCTAGTTGGGGTACA+AGG + chr6_3:48448068-48448087 None:intergenic 55.0%
CATGGGAGTCGGTCTAGTTG+GGG + chr6_3:48448075-48448094 None:intergenic 55.0%
GTCATGGGAGTCGGTCTAGT+TGG + chr6_3:48448077-48448096 None:intergenic 55.0%
! TGTGGGGTTAGCGAAGGTGT+TGG + chr6_3:48448105-48448124 None:intergenic 55.0%
! GTGGTGGAGCTAGGGCTAAT+AGG + chr6_3:48448158-48448177 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGAGCT+AGG + chr6_3:48448167-48448186 None:intergenic 55.0%
!! GAGGTGGTGGTGATAGTGGT+TGG + chr6_3:48447582-48447601 None:intergenic 55.0%
!! ATGGAGAGAGGTGGTGGGAT+TGG + chr6_3:48447748-48447767 None:intergenic 55.0%
AGTGGTGGTAGTTGGGATGG+GGG + chr6_3:48447772-48447791 None:intergenic 55.0%
TTGGTAGGCGTGGGGTTAAC+AGG + chr6_3:48448017-48448036 None:intergenic 55.0%
! CAAGGAGTAGTGAGGGTACG+AGG + chr6_3:48448050-48448069 None:intergenic 55.0%
GTCGGTCTAGTTGGGGTACA+AGG + chr6_3:48448068-48448087 None:intergenic 55.0%
CATGGGAGTCGGTCTAGTTG+GGG + chr6_3:48448075-48448094 None:intergenic 55.0%
GTCATGGGAGTCGGTCTAGT+TGG + chr6_3:48448077-48448096 None:intergenic 55.0%
! TGTGGGGTTAGCGAAGGTGT+TGG + chr6_3:48448105-48448124 None:intergenic 55.0%
! GTGGTGGAGCTAGGGCTAAT+AGG + chr6_3:48448158-48448177 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGAGCT+AGG + chr6_3:48448167-48448186 None:intergenic 55.0%
! GGTGGAGGTGGTGGTGATAG+TGG + chr6_3:48447586-48447605 None:intergenic 60.0%
TGGTAGTTGGGATGGGGGCA+TGG + chr6_3:48447767-48447786 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_3:48448635-48448654 Msa0953060:intron 60.0%
! GGTGGAGGTGGTGGTGATAG+TGG + chr6_3:48447586-48447605 None:intergenic 60.0%
TGGTAGTTGGGATGGGGGCA+TGG + chr6_3:48447767-48447786 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_3:48448635-48448654 Msa0953060:intron 60.0%
GGGGCATGGAGAGAGGTGGT+GGG + chr6_3:48447753-48447772 None:intergenic 65.0%
! GATGGGGGCATGGAGAGAGG+TGG + chr6_3:48447757-48447776 None:intergenic 65.0%
! TGGGATGGGGGCATGGAGAG+AGG + chr6_3:48447760-48447779 None:intergenic 65.0%
GGGGCATGGAGAGAGGTGGT+GGG + chr6_3:48447753-48447772 None:intergenic 65.0%
! GATGGGGGCATGGAGAGAGG+TGG + chr6_3:48447757-48447776 None:intergenic 65.0%
! TGGGATGGGGGCATGGAGAG+AGG + chr6_3:48447760-48447779 None:intergenic 65.0%
! GGGGGCATGGAGAGAGGTGG+TGG + chr6_3:48447754-48447773 None:intergenic 70.0%
! GGGGGCATGGAGAGAGGTGG+TGG + chr6_3:48447754-48447773 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 48447474 48449902 48447474 ID=Msa0953060;Name=Msa0953060
chr6_3 mRNA 48447474 48449902 48447474 ID=Msa0953060-mRNA-1;Parent=Msa0953060;Name=Msa0953060-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|559
chr6_3 exon 48448941 48449902 48448941 ID=Msa0953060-mRNA-1:exon:10663;Parent=Msa0953060-mRNA-1
chr6_3 exon 48448720 48448836 48448720 ID=Msa0953060-mRNA-1:exon:10662;Parent=Msa0953060-mRNA-1
chr6_3 exon 48447474 48448074 48447474 ID=Msa0953060-mRNA-1:exon:10661;Parent=Msa0953060-mRNA-1
chr6_3 CDS 48448941 48449902 48448941 ID=Msa0953060-mRNA-1:cds;Parent=Msa0953060-mRNA-1
chr6_3 CDS 48448720 48448836 48448720 ID=Msa0953060-mRNA-1:cds;Parent=Msa0953060-mRNA-1
chr6_3 CDS 48447474 48448074 48447474 ID=Msa0953060-mRNA-1:cds;Parent=Msa0953060-mRNA-1
Gene Sequence

>Msa0953060

ATGGACATTGACAAATGGGATCTCTTTTCCTTTGTCAATAGCAACAAGGCTAAAACCTTTACTAACCCCGCCTCTTTTATTGAAACCCCATCTCCATCTCAAACACCAACCACTATCACCACCACCTCCACCACCAATAATGTCATATCACCTCAAAATATTCCACCATTGTACTTCGATGGTTTTAGCCTTTCTCAAGACAATAACCCTGTTCCTTTTTCCCCACTTAAACAAAATGATTTCATAGATCTAGACAAATTGAAAATCAATTCCAATCCCACCACCTCTCTCCATGCCCCCATCCCAACTACCACCACTATCCCAACCTTCATTACAACAACCACTTCATCCCCAATCACTATTATCCAAACCCCTTCAAGCACCACTATTCCCGACCACATAACATTTGGTACAATCACTAACACTAGTGCTCATGCTTTCAATAAAAAACCCACCTTTTTTGATTGTCCAACACTTATCGAACAACAAGAAATGCAATCAAATGGGCACGAGCTAAATAAATTTATATTCAACAAAAATCCTGTTAACCCCACGCCTACCAATAATTTCAATCCTCGTACCCTCACTACTCCTTGTACCCCAACTAGACCGACTCCCATGACCACTACCAACACCTTCGCTAACCCCACAACAACTTTTTTCACTCCGACCACTACTGGACCTATTAGCCCTAGCTCCACCACCAACTTGACTAGCATCATCACTAGTGTTCATGGAACCAGTCAATATCGTACCATTTCAGATTATGCAATACTCATCAAACAACAACAAATTCAACCAAACAATAACATTCAAGTGTTTGATCATGCATACAACTATTCATTTGTTCCACAACAACCCCCAAGAAAGCTCAATCAATCACAAATTCAATTACCCAACACCAGATCTAGGATTTTACCAAATTCAGATTCACAAAAAGCAAAACATAATTCAAGAATCGGAAAAATTAACAACAAGGTAACTTTGGAATGCCATGTGAGAACAAACAAGCTTTCAGAAGATTGGTGGTCGTGGACAAAATATGGACAAAAAAACATTAGCGGGTCCCCACATCCAAGGAGCTACTTTAAATGTAGCAGTTCTAAAGATTGTTCAGCAAAAAAACTAGTACAAAAAAGTGACACCAAAGAGGACACTTTTGTTGTGACGTTTGTTGGAGCACACAACCATGAAAAACCAGCAGGTAAATGGAACTCTATTGGTGGGACCTCCCAGAACAAGTCATCAAAGACTAGATTACCCGCTGTTGGAAATTTCAAGTCGTCACCAAACATTTCAAAGCTGGGTTCTCAAAATGTGACAATGATGCATGTCGATCATCCAGAGAGCAGGAATATTCAAGTTCTCCCTAGTCAATCAGAAATCCCTTATTCAGAAACTGAACTTATAGAGACCCATTTACCTGCTGCTAGAGAAATTGAATCATCTCCTAATGTTGAAAACTTGTTTTCATATGATGTGACGATGCTACAATCTGATGAGCCAATGAGTAGCAATGCCCATGATTACTCCGGTGAATCACAAATCCTTCCTTCAGGAAACAAACTTATTGGAAACTCTGATGACGATGAAGAAATTATGATACCAAGCATGACTGATATGTCAGAGGATTTCTTATTGGATTTTGACCACCTCAATGATGGTTTTCTATTTCCTTAG
Protein sequence

>Msa0953060

MDIDKWDLFSFVNSNKAKTFTNPASFIETPSPSQTPTTITTTSTTNNVISPQNIPPLYFDGFSLSQDNNPVPFSPLKQNDFIDLDKLKINSNPTTSLHAPIPTTTTIPTFITTTTSSPITIIQTPSSTTIPDHITFGTITNTSAHAFNKKPTFFDCPTLIEQQEMQSNGHELNKFIFNKNPVNPTPTNNFNPRTLTTPCTPTRPTPMTTTNTFANPTTTFFTPTTTGPISPSSTTNLTSIITSVHGTSQYRTISDYAILIKQQQIQPNNNIQVFDHAYNYSFVPQQPPRKLNQSQIQLPNTRSRILPNSDSQKAKHNSRIGKINNKVTLECHVRTNKLSEDWWSWTKYGQKNISGSPHPRSYFKCSSSKDCSAKKLVQKSDTKEDTFVVTFVGAHNHEKPAGKWNSIGGTSQNKSSKTRLPAVGNFKSSPNISKLGSQNVTMMHVDHPESRNIQVLPSQSEIPYSETELIETHLPAAREIESSPNVENLFSYDVTMLQSDEPMSSNAHDYSGESQILPSGNKLIGNSDDDEEIMIPSMTDMSEDFLLDFDHLNDGFLFP*