AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0953070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953070 MtrunA17_Chr6g0470151 79.282 362 63 3 1 360 1 352 3.27e-154 446
Msa0953070 MtrunA17_Chr2g0289181 46.352 233 124 1 325 556 1 233 7.36e-66 214
Msa0953070 MtrunA17_Chr6g0470161 79.675 123 21 1 434 556 2 120 7.84e-60 194
Msa0953070 MtrunA17_Chr7g0266611 48.485 165 83 2 393 556 2 165 2.96e-31 119
Msa0953070 MtrunA17_Chr1g0202461 47.706 109 55 2 305 413 229 335 1.35e-26 111
Msa0953070 MtrunA17_Chr8g0366921 49.198 187 75 5 1 179 1 175 7.62e-26 108
Msa0953070 MtrunA17_Chr8g0348311 46.392 97 50 1 315 411 134 228 5.80e-23 100
Msa0953070 MtrunA17_Chr7g0248691 45.361 97 53 0 315 411 131 227 6.60e-22 97.1
Msa0953070 MtrunA17_Chr7g0270051 45.977 87 47 0 331 417 46 132 1.10e-19 89.4
Msa0953070 MtrunA17_Chr8g0387501 39.855 138 71 4 339 467 130 264 2.18e-19 88.6
Msa0953070 MtrunA17_Chr2g0293481 49.351 77 38 1 339 415 268 343 8.85e-19 89.4
Msa0953070 MtrunA17_Chr7g0238921 40.952 105 51 3 291 395 87 180 1.45e-16 80.9
Msa0953070 MtrunA17_Chr5g0401821 42.391 92 50 1 307 395 165 256 2.78e-16 79.3
Msa0953070 MtrunA17_Chr4g0053281 39.535 86 50 1 310 395 240 323 7.76e-16 79.0
Msa0953070 MtrunA17_Chr2g0319961 50.794 63 31 0 339 401 81 143 1.08e-15 77.4
Msa0953070 MtrunA17_Chr8g0379461 47.619 63 33 0 339 401 77 139 1.83e-15 76.3
Msa0953070 MtrunA17_Chr4g0071521 42.857 91 49 1 308 395 212 302 1.84e-15 77.8
Msa0953070 MtrunA17_Chr2g0284321 50.000 60 30 0 339 398 36 95 2.16e-15 75.5
Msa0953070 MtrunA17_Chr1g0184691 45.122 82 42 1 319 397 271 352 2.31e-15 77.8
Msa0953070 MtrunA17_Chr1g0147881 39.560 91 52 1 308 395 229 319 1.67e-14 75.1
Msa0953070 MtrunA17_Chr7g0228941 43.077 65 37 0 332 396 46 110 3.23e-14 69.7
Msa0953070 MtrunA17_Chr3g0139021 40.698 86 46 2 311 395 290 371 3.44e-14 74.7
Msa0953070 MtrunA17_Chr7g0218081 42.424 66 37 1 336 401 408 472 6.35e-14 74.3
Msa0953070 MtrunA17_Chr2g0293901 46.108 167 76 4 1 167 1 153 8.84e-14 70.5
Msa0953070 MtrunA17_Chr8g0387981 39.130 92 49 3 309 393 98 189 9.45e-14 72.8
Msa0953070 MtrunA17_Chr4g0042831 37.634 93 53 2 336 424 276 367 2.13e-13 72.0
Msa0953070 MtrunA17_Chr5g0418191 41.176 68 39 1 336 403 318 384 8.64e-13 70.5
Msa0953070 MtrunA17_Chr4g0051881 46.774 62 32 1 338 399 178 238 8.85e-13 69.7
Msa0953070 MtrunA17_Chr7g0249311 46.377 69 35 2 330 398 171 237 1.26e-12 70.5
Msa0953070 MtrunA17_Chr7g0249311 40.909 66 38 1 338 403 392 456 1.71e-11 67.0
Msa0953070 MtrunA17_Chr2g0302391 43.333 60 34 0 339 398 212 271 1.67e-12 69.7
Msa0953070 MtrunA17_Chr3g0129321 40.580 69 38 3 335 402 115 181 1.70e-12 66.6
Msa0953070 MtrunA17_Chr7g0263531 44.615 65 35 1 334 398 357 420 2.01e-12 69.3
Msa0953070 MtrunA17_Chr2g0288871 32.673 101 67 1 298 398 266 365 2.96e-12 69.3
Msa0953070 MtrunA17_Chr3g0101131 39.394 66 39 1 338 403 415 479 4.47e-12 68.9
Msa0953070 MtrunA17_Chr3g0101131 41.558 77 43 2 331 407 236 310 2.83e-11 66.2
Msa0953070 MtrunA17_Chr3g0079691 50.000 62 29 2 337 398 279 338 6.25e-12 68.6
Msa0953070 MtrunA17_Chr3g0079691 37.500 64 39 1 338 401 495 557 3.16e-11 66.2
Msa0953070 MtrunA17_Chr7g0243891 47.059 68 34 2 331 398 209 274 6.70e-12 68.2
Msa0953070 MtrunA17_Chr4g0001361 43.939 66 37 0 333 398 157 222 6.74e-12 67.0
Msa0953070 MtrunA17_Chr4g0074001 39.394 66 39 1 336 401 357 421 6.88e-12 68.2
Msa0953070 MtrunA17_Chr3g0136961 46.552 58 31 0 338 395 138 195 7.24e-12 66.6
Msa0953070 MtrunA17_Chr1g0194481 41.429 70 40 1 338 407 158 226 9.53e-12 66.6
Msa0953070 MtrunA17_Chr5g0443131 45.161 62 33 1 338 399 157 217 1.29e-11 65.9
Msa0953070 MtrunA17_Chr7g0266621 46.154 91 42 1 1 91 1 84 1.48e-11 65.5
Msa0953070 MtrunA17_Chr2g0333851 43.284 67 38 0 333 399 164 230 1.50e-11 65.9
Msa0953070 MtrunA17_Chr1g0150271 34.167 120 72 2 305 419 65 182 2.15e-11 64.3
Msa0953070 MtrunA17_Chr1g0188941 40.323 62 36 1 338 399 51 111 2.38e-11 60.8
Msa0953070 MtrunA17_Chr1g0150281 40.278 72 43 0 339 410 141 212 2.67e-11 64.7
Msa0953070 MtrunA17_Chr5g0445311 37.500 64 39 1 338 401 364 426 3.17e-11 65.9
Msa0953070 MtrunA17_Chr5g0447701 43.243 74 38 2 331 401 242 314 3.26e-11 65.5
Msa0953070 MtrunA17_Chr7g0249301 40.625 64 37 1 338 401 292 354 3.42e-11 65.1
Msa0953070 MtrunA17_Chr3g0099641 34.483 87 54 2 312 398 228 311 4.80e-11 65.1
Msa0953070 MtrunA17_Chr4g0004911 39.062 64 38 1 338 401 336 398 6.73e-11 64.7
Msa0953070 MtrunA17_Chr8g0368721 46.524 187 85 4 1 186 1 173 9.47e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0953070 AT5G52830.1 50.000 98 47 2 316 413 144 239 1.47e-24 105
Msa0953070 AT4G01250.1 35.099 151 91 3 283 428 74 222 9.09e-24 102
Msa0953070 AT4G23550.1 45.349 86 46 1 330 415 132 216 7.12e-19 88.2
Msa0953070 AT2G34830.1 52.174 69 32 1 339 407 216 283 1.01e-17 86.3
Msa0953070 AT1G30650.1 35.570 149 93 1 293 441 175 320 1.30e-17 85.9
Msa0953070 AT2G34830.2 51.471 68 33 0 339 406 225 292 1.34e-17 85.9
Msa0953070 AT5G45050.4 37.963 108 67 0 299 406 1002 1109 1.68e-17 87.0
Msa0953070 AT5G45050.1 37.963 108 67 0 299 406 1141 1248 2.10e-17 86.7
Msa0953070 AT5G45050.2 37.963 108 67 0 299 406 1113 1220 2.52e-17 86.7
Msa0953070 AT2G23320.1 41.758 91 50 1 308 395 207 297 5.56e-17 82.4
Msa0953070 AT5G28650.1 39.583 96 55 1 305 397 226 321 1.06e-16 82.0
Msa0953070 AT3G04670.1 39.583 96 55 1 305 397 226 321 1.67e-16 81.3
Msa0953070 AT4G24240.1 40.625 96 54 1 303 395 243 338 6.96e-16 79.7
Msa0953070 AT2G24570.1 36.735 98 59 1 305 399 207 304 5.29e-15 76.6
Msa0953070 AT3G58710.2 47.692 65 34 0 339 403 71 135 9.09e-15 75.1
Msa0953070 AT3G58710.1 47.692 65 34 0 339 403 72 136 9.22e-15 75.1
Msa0953070 AT4G31550.1 36.458 96 58 1 312 404 217 312 2.83e-14 74.7
Msa0953070 AT1G29280.1 48.333 60 31 0 339 398 75 134 2.83e-14 73.6
Msa0953070 AT4G31550.2 36.559 93 56 1 315 404 219 311 3.59e-14 74.3
Msa0953070 AT2G30590.1 39.130 92 42 2 312 397 289 372 2.37e-13 72.4
Msa0953070 AT2G03340.1 42.424 66 37 1 336 401 413 477 3.80e-13 72.4
Msa0953070 AT3G01080.2 36.559 93 48 2 316 398 312 403 4.17e-13 72.0
Msa0953070 AT3G01080.1 42.857 63 35 1 336 398 304 365 5.38e-13 71.6
Msa0953070 AT1G80840.1 43.284 67 38 0 333 399 141 207 5.47e-13 70.5
Msa0953070 AT5G45260.1 43.077 65 35 1 339 401 1209 1273 8.57e-13 72.0
Msa0953070 AT5G43290.1 41.096 73 42 1 323 395 99 170 1.09e-12 68.9
Msa0953070 AT2G04880.2 44.444 63 34 1 339 401 284 345 1.77e-12 70.1
Msa0953070 AT2G04880.1 44.444 63 34 1 339 401 308 369 1.78e-12 70.1
Msa0953070 AT1G13960.1 42.857 63 35 1 336 398 407 468 4.14e-12 68.9
Msa0953070 AT1G13960.2 42.857 63 35 1 336 398 254 315 4.32e-12 68.2
Msa0953070 AT2G37260.1 37.037 81 46 2 319 395 326 405 1.11e-11 67.4
Msa0953070 AT4G18170.1 45.161 62 33 1 338 399 172 232 1.13e-11 66.6
Msa0953070 AT2G37260.3 37.037 81 46 2 319 395 246 325 1.22e-11 66.6
Msa0953070 AT2G37260.2 37.037 81 46 2 319 395 244 323 1.26e-11 66.6
Msa0953070 AT2G25000.2 45.455 66 36 0 333 398 98 163 1.73e-11 64.7
Msa0953070 AT2G25000.4 45.455 66 36 0 333 398 98 163 1.73e-11 64.7
Msa0953070 AT2G25000.3 45.455 66 36 0 333 398 120 185 1.87e-11 65.1
Msa0953070 AT1G29860.1 43.548 62 34 1 338 399 136 196 2.14e-11 65.5
Msa0953070 AT4G31800.2 40.449 89 51 1 333 421 106 192 3.23e-11 64.3
Msa0953070 AT5G46350.1 42.188 64 36 1 338 401 183 245 3.26e-11 65.5
Msa0953070 AT4G04450.2 32.323 99 64 2 311 409 174 269 3.55e-11 65.9
Msa0953070 AT2G21900.1 45.161 62 33 1 338 399 109 169 4.66e-11 62.8
Msa0953070 AT2G40750.1 35.714 98 50 3 307 393 114 209 4.76e-11 65.1
Msa0953070 AT4G26640.7 39.062 64 38 1 338 401 341 403 5.23e-11 65.5
Msa0953070 AT4G26640.7 39.744 78 44 3 336 412 169 244 7.16e-11 65.1
Msa0953070 AT2G25000.1 45.455 66 36 0 333 398 141 206 5.29e-11 63.9
Msa0953070 AT5G07100.1 43.939 66 36 1 333 398 112 176 5.68e-11 64.3
Msa0953070 AT4G26640.5 39.062 64 38 1 338 401 205 267 5.87e-11 65.1
Msa0953070 AT4G26640.5 39.744 78 44 3 336 412 33 108 8.61e-11 64.3
Msa0953070 AT4G26640.6 39.062 64 38 1 338 401 205 267 5.87e-11 65.1
Msa0953070 AT4G26640.6 39.744 78 44 3 336 412 33 108 8.61e-11 64.3
Msa0953070 AT4G26640.4 39.062 64 38 1 338 401 205 267 5.87e-11 65.1
Msa0953070 AT4G26640.4 39.744 78 44 3 336 412 33 108 8.61e-11 64.3
Msa0953070 AT4G26640.3 39.062 64 38 1 338 401 205 267 5.87e-11 65.1
Msa0953070 AT4G26640.3 39.744 78 44 3 336 412 33 108 8.61e-11 64.3
Msa0953070 AT4G26640.1 39.062 64 38 1 338 401 309 371 5.94e-11 65.5
Msa0953070 AT4G26640.1 39.744 78 44 3 336 412 137 212 8.59e-11 64.7
Msa0953070 AT4G26640.2 39.062 64 38 1 338 401 381 443 5.99e-11 65.5
Msa0953070 AT4G26640.2 39.744 78 44 3 336 412 209 284 8.35e-11 65.1
Msa0953070 AT1G69810.2 31.298 131 71 4 294 409 91 217 6.05e-11 64.3
Msa0953070 AT4G04450.1 32.323 99 64 2 311 409 268 363 6.87e-11 65.5
Msa0953070 AT2G46400.1 39.785 93 48 3 309 393 69 161 6.98e-11 63.9
Msa0953070 AT1G69810.1 31.298 131 71 4 294 409 149 275 7.08e-11 64.7
Msa0953070 AT1G68150.1 26.543 162 89 4 244 400 161 297 7.48e-11 64.7
Msa0953070 AT5G07100.2 43.939 66 36 1 333 398 19 83 7.92e-11 62.4
Msa0953070 AT5G07100.4 43.939 66 36 1 333 398 19 83 7.92e-11 62.4
Msa0953070 AT5G07100.5 43.939 66 36 1 333 398 19 83 7.92e-11 62.4
Msa0953070 AT5G07100.3 43.939 66 36 1 333 398 19 83 7.92e-11 62.4
Msa0953070 AT5G56270.1 37.500 64 39 1 338 401 487 549 8.39e-11 65.5
Msa0953070 AT4G31800.1 40.449 89 51 1 333 421 171 257 8.62e-11 63.9
Msa0953070 AT4G23810.1 40.000 85 45 2 315 393 131 215 9.17e-11 63.9
Msa0953070 AT4G30935.1 38.095 63 38 1 339 401 332 393 9.62e-11 64.7

Find 145 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCAGGAAACAAACTTAT+TGG 0.153110 6_3:-48454220 Msa0953070:CDS
TTTCTCTAGCAGCGGGTAAA+TGG 0.192922 6_3:+48454356 None:intergenic
TACCCGCTGTTGGAAATTTC+AGG 0.250971 6_3:-48454510 Msa0953070:CDS
TTGAGGAGATATGACATTAT+TGG 0.264254 6_3:+48456378 None:intergenic
TGTGATTGATTGAGCTTTCT+TGG 0.276762 6_3:+48455653 None:intergenic
GGTGGGAGTATTGAAATTAT+TGG 0.287618 6_3:+48455955 None:intergenic
TGGTGGTCGTGGACAAAATA+TGG 0.287824 6_3:-48455391 Msa0953070:CDS
TAGTCTTTGATGACTTGTTC+TGG 0.291346 6_3:+48454536 None:intergenic
TATGTCAGAGGATTTCTTAT+TGG 0.311118 6_3:-48454152 Msa0953070:CDS
ATCCCACCATTGTACGTTGA+TGG 0.346137 6_3:-48456352 Msa0953070:CDS
GTGATTGATTGAGCTTTCTT+GGG 0.361329 6_3:+48455654 None:intergenic
AGTCTTTGATGACTTGTTCT+GGG 0.370924 6_3:+48454537 None:intergenic
TAGTGGTGGTCGAAGGGGTT+TGG 0.373460 6_3:+48456149 None:intergenic
TTGGTGTTTGAGATGGAGAT+GGG 0.375368 6_3:+48456425 None:intergenic
GGGTTTGGATAATAGTGATT+GGG 0.385706 6_3:+48456164 None:intergenic
TTAGCTCGTGCCCATTTGAT+TGG 0.393851 6_3:+48456020 None:intergenic
TTGGTAGGCATGGGGTTAAC+GGG 0.398141 6_3:+48455974 None:intergenic
ATTGGTAGGCATGGGGTTAA+CGG 0.400087 6_3:+48455973 None:intergenic
AATTAACAACAAGGTAACTT+TGG 0.407679 6_3:-48455449 Msa0953070:CDS
GTCAAGTTGGTGGTGGTGCT+AGG 0.408314 6_3:+48455824 None:intergenic
TAGTGGTAGTAGTTGGGATG+GGG 0.409163 6_3:+48456215 None:intergenic
AAGGCGTTGGTAGTGGTCAT+GGG 0.410054 6_3:+48455899 None:intergenic
TGTAATGAGGGTTGGGATAG+TGG 0.411087 6_3:+48456198 None:intergenic
TTGGAGAGAGGTGGTGGGAT+TGG 0.411580 6_3:+48456240 None:intergenic
AATTACCCAACACCAGATCT+AGG 0.412137 6_3:-48455625 Msa0953070:CDS
AAGGAACAGGGTTATTGTCT+TGG 0.412589 6_3:+48456317 None:intergenic
TCCAATGGACATTGACGATT+GGG 0.412894 6_3:-48456515 None:intergenic
GTGATTCACCGGAGTAATCA+TGG 0.421109 6_3:+48454251 None:intergenic
ATTCCCGACCACATAACATT+TGG 0.422243 6_3:-48456127 Msa0953070:CDS
CAACAAGAAATCCAATCAAA+TGG 0.425635 6_3:-48456031 Msa0953070:CDS
TTCTCTAGCAGCGGGTAAAT+GGG 0.428823 6_3:+48454357 None:intergenic
GAATCACAAATCCTTCCTTC+AGG 0.431729 6_3:-48454235 Msa0953070:CDS
AAGTGGTTGTAATGAGGGTT+GGG 0.438687 6_3:+48456191 None:intergenic
AGGAACAGGGTTATTGTCTT+GGG 0.439157 6_3:+48456318 None:intergenic
CTCCAATGGACATTGACGAT+TGG 0.439949 6_3:-48456516 None:intergenic
AACACTTGACTGTTATTGTT+TGG 0.445737 6_3:+48455716 None:intergenic
GAAGGCGTTGGTAGTGGTCA+TGG 0.446538 6_3:+48455898 None:intergenic
TTGAAATTATTGGTAGGCAT+GGG 0.449529 6_3:+48455965 None:intergenic
GAACCCGGCTTTGAAATGTT+TGG 0.453733 6_3:+48454481 None:intergenic
GTTGGTGTTTGAGATGGAGA+TGG 0.454612 6_3:+48456424 None:intergenic
TTGGGATAGTGGTAGTAGTT+GGG 0.457739 6_3:+48456209 None:intergenic
AGTGATAATGTTAGTCAAGT+TGG 0.462717 6_3:+48455811 None:intergenic
GTTGGGATAGTGGTAGTAGT+TGG 0.463365 6_3:+48456208 None:intergenic
CGGGAATAGTGGTGGTCGAA+GGG 0.465973 6_3:+48456143 None:intergenic
AACATTATCACTAGTGTTCG+TGG 0.470531 6_3:-48455800 Msa0953070:CDS
GGGGTTTGGATAATAGTGAT+TGG 0.471326 6_3:+48456163 None:intergenic
ATTAGGTAAAATCCTAGATC+TGG 0.473232 6_3:+48455613 None:intergenic
GAAGTGGTGGTGACAGTGGT+TGG 0.476900 6_3:+48456406 None:intergenic
AGATATGACATTATTGGTGG+TGG 0.477605 6_3:+48456384 None:intergenic
GTACCAAATGTTATGTGGTC+GGG 0.477811 6_3:+48456124 None:intergenic
GTGGTGGTGCTAGGGCTAAT+AGG 0.483423 6_3:+48455833 None:intergenic
GACATTATTGGTGGTGGAAG+TGG 0.484818 6_3:+48456390 None:intergenic
GTCACCAAACATTTCAAAGC+CGG 0.485938 6_3:-48454485 Msa0953070:CDS
AACAAGAAATCCAATCAAAT+GGG 0.486164 6_3:-48456030 Msa0953070:CDS
TCATGGGCATTGCTACTCAT+TGG 0.492500 6_3:+48454268 None:intergenic
TGTTATGTGGTCGGGAATAG+TGG 0.492886 6_3:+48456132 None:intergenic
TCGGGAATAGTGGTGGTCGA+AGG 0.494738 6_3:+48456142 None:intergenic
AGTGGTAGTAGTTGGGATGG+GGG 0.495977 6_3:+48456216 None:intergenic
GTTAGCGAAGGCGTTGGTAG+TGG 0.498129 6_3:+48455892 None:intergenic
TTCAATAAAAGAGGCGAGGT+TGG 0.501765 6_3:+48456450 None:intergenic
ATTGAAATTATTGGTAGGCA+TGG 0.502253 6_3:+48455964 None:intergenic
TCAAGTTGGTGGTGGTGCTA+GGG 0.503913 6_3:+48455825 None:intergenic
GAAGTGGTTGTAATGAGGGT+TGG 0.505846 6_3:+48456190 None:intergenic
GGGGCTTGGAGAGAGGTGGT+GGG 0.506802 6_3:+48456235 None:intergenic
ACAGGTAAATGGAACTTCAT+TGG 0.508070 6_3:-48454568 Msa0953070:CDS
AAGGGATTTCTGATTGACTA+GGG 0.508289 6_3:+48454401 None:intergenic
GGTGGAAGTGGTGGTGACAG+TGG 0.510312 6_3:+48456402 None:intergenic
GAAGGGATTTCTGATTGACT+AGG 0.516175 6_3:+48454400 None:intergenic
TAAGTTTGTTTCCTGAAGGA+AGG 0.517251 6_3:+48454224 None:intergenic
GATTCAATTTCTCTAGCAGC+GGG 0.517766 6_3:+48454349 None:intergenic
TCACCAAACATTTCAAAGCC+GGG 0.523908 6_3:-48454484 Msa0953070:CDS
GGATGAAGTGGTTGTAATGA+GGG 0.524605 6_3:+48456186 None:intergenic
AAAATCCTAGATCTGGTGTT+GGG 0.524682 6_3:+48455620 None:intergenic
AAGACTAGATTACCCGCTGT+TGG 0.528458 6_3:-48454520 Msa0953070:CDS
ACAGTGGTTGGTGTTTGAGA+TGG 0.528977 6_3:+48456418 None:intergenic
CCAATAAGTTTGTTTCCTGA+AGG 0.534237 6_3:+48454220 None:intergenic
GGGATGAAGTGGTTGTAATG+AGG 0.534322 6_3:+48456185 None:intergenic
CAAGCAAGCTCTCAGAGGAT+TGG 0.535640 6_3:-48455411 Msa0953070:CDS
GTAAATCTAGTTGGGGTGCA+AGG 0.537115 6_3:+48455923 None:intergenic
GATAGTGGTAGTAGTTGGGA+TGG 0.537972 6_3:+48456213 None:intergenic
GAGTATTGCATAATCTGAAA+TGG 0.538274 6_3:+48455760 None:intergenic
TCCCAATCGTCAATGTCCAT+TGG 0.539210 6_3:+48456514 None:intergenic
GGAGTATTGAAATTATTGGT+AGG 0.540131 6_3:+48455959 None:intergenic
CACAACAAAAGTGTCCTCTT+CGG 0.542763 6_3:+48454624 None:intergenic
GGTGCAAGGAGTAGTGAGGG+TGG 0.542792 6_3:+48455937 None:intergenic
ATGAAGTTCCATTTACCTGT+TGG 0.543493 6_3:+48454571 None:intergenic
TGGGGTGCAAGGAGTAGTGA+GGG 0.543951 6_3:+48455934 None:intergenic
AACCATCAACGTACAATGGT+GGG 0.544404 6_3:+48456350 None:intergenic
AGGAAGGATTTGTGATTCAC+CGG 0.548075 6_3:+48454240 None:intergenic
TGGTGTTTGAGATGGAGATG+GGG 0.548223 6_3:+48456426 None:intergenic
GCAAGCTCTCAGAGGATTGG+TGG 0.548538 6_3:-48455408 Msa0953070:CDS
GGTTTGGATAATAGTGATTG+GGG 0.549958 6_3:+48456165 None:intergenic
ATAGTGGTAGTAGTTGGGAT+GGG 0.552114 6_3:+48456214 None:intergenic
AAAAGAGGCGAGGTTGGTAA+AGG 0.554925 6_3:+48456456 None:intergenic
ATCACTAACACTAGTGCTCA+TGG 0.555133 6_3:-48456100 Msa0953070:CDS
AGGCGTTGGTAGTGGTCATG+GGG 0.556274 6_3:+48455900 None:intergenic
GTGCAAGGAGTAGTGAGGGT+GGG 0.556644 6_3:+48455938 None:intergenic
TCTGACATATCAGTCATGCT+TGG 0.560481 6_3:+48454166 None:intergenic
TGATTCACCGGAGTAATCAT+GGG 0.561593 6_3:+48454252 None:intergenic
TGATTGATTGAGCTTTCTTG+GGG 0.561989 6_3:+48455655 None:intergenic
TAAAATCCTAGATCTGGTGT+TGG 0.562048 6_3:+48455619 None:intergenic
AGCCTTGTTGCTATTGACAA+AGG 0.567049 6_3:+48456483 None:intergenic
AGAGCTTGCTTGTTCTCACA+TGG 0.567985 6_3:+48455422 None:intergenic
CAGGGTTATTGTCTTGGGCA+AGG 0.568974 6_3:+48456323 None:intergenic
TGAAATTATTGGTAGGCATG+GGG 0.572356 6_3:+48455966 None:intergenic
AATAGTGATTGGGGATGAAG+TGG 0.575835 6_3:+48456174 None:intergenic
ATGTGAAAAGACCTTGGATG+TGG 0.577521 6_3:+48455346 None:intergenic
TGAAATGGTAGGATATTGAC+TGG 0.578765 6_3:+48455775 None:intergenic
ATTATTGGTGGTGGAAGTGG+TGG 0.581471 6_3:+48456393 None:intergenic
AAACCATCAACGTACAATGG+TGG 0.582270 6_3:+48456349 None:intergenic
AGGAGATATGACATTATTGG+TGG 0.586877 6_3:+48456381 None:intergenic
TCTCAGAGGATTGGTGGTCG+TGG 0.587898 6_3:-48455402 Msa0953070:CDS
AGATGGGGTTTCAATAAAAG+AGG 0.589549 6_3:+48456441 None:intergenic
TGTGGGGTTAGCGAAGGCGT+TGG 0.590761 6_3:+48455886 None:intergenic
ATTGCATAATCTGAAATGGT+AGG 0.596503 6_3:+48455764 None:intergenic
CTAATAGGTCCAGTGGTGGT+CGG 0.599128 6_3:+48455848 None:intergenic
GACCTGAAATTTCCAACAGC+GGG 0.604025 6_3:+48454508 None:intergenic
TTGGGGTGCAAGGAGTAGTG+AGG 0.605374 6_3:+48455933 None:intergenic
TGATTGTACCAAATGTTATG+TGG 0.605424 6_3:+48456119 None:intergenic
TGATTCAATTTCTCTAGCAG+CGG 0.608307 6_3:+48454348 None:intergenic
GGTAAATGGAACTTCATTGG+TGG 0.611754 6_3:-48454565 Msa0953070:CDS
CTTTGATGACTTGTTCTGGG+AGG 0.611922 6_3:+48454540 None:intergenic
TTCCTTTGTCAATAGCAACA+AGG 0.614355 6_3:-48456485 Msa0953070:CDS
GGGAATAGTGGTGGTCGAAG+GGG 0.619032 6_3:+48456144 None:intergenic
GCTAGGGCTAATAGGTCCAG+TGG 0.619531 6_3:+48455841 None:intergenic
GAAATAGAAAACCATCATTG+AGG 0.620026 6_3:+48454119 None:intergenic
TTAGCGGGTCCCCACATCCA+AGG 0.623038 6_3:-48455357 Msa0953070:intron
AGCAATGCCCATGATTACTC+CGG 0.626209 6_3:-48454259 Msa0953070:CDS
TGTGAAAAGACCTTGGATGT+GGG 0.630725 6_3:+48455347 None:intergenic
GTAAATGGAACTTCATTGGT+GGG 0.632707 6_3:-48454564 Msa0953070:CDS
TGTACCAAATGTTATGTGGT+CGG 0.633920 6_3:+48456123 None:intergenic
AGTTGATGTGGGGTTAGCGA+AGG 0.635640 6_3:+48455880 None:intergenic
CTAAAACCATCAACGTACAA+TGG 0.636116 6_3:+48456346 None:intergenic
GATAATGTTAGTCAAGTTGG+TGG 0.636625 6_3:+48455814 None:intergenic
GTGAAAAGACCTTGGATGTG+GGG 0.637723 6_3:+48455348 None:intergenic
AATGTTAGTCAAGTTGGTGG+TGG 0.642962 6_3:+48455817 None:intergenic
ATAGAAAACCATCATTGAGG+TGG 0.645904 6_3:+48454122 None:intergenic
GGGTTTCAATAAAAGAGGCG+AGG 0.650323 6_3:+48456446 None:intergenic
AAGCATGACTGATATGTCAG+AGG 0.660878 6_3:-48454164 Msa0953070:CDS
GATTGATTGAGCTTTCTTGG+GGG 0.688353 6_3:+48455656 None:intergenic
GGCGTTGGTAGTGGTCATGG+GGG 0.692398 6_3:+48455901 None:intergenic
AGGGCTAATAGGTCCAGTGG+TGG 0.699877 6_3:+48455844 None:intergenic
CGACCTGAAATTTCCAACAG+CGG 0.704425 6_3:+48454507 None:intergenic
GAGAACAAGCAAGCTCTCAG+AGG 0.713970 6_3:-48455416 Msa0953070:CDS
TATGTGGTCGGGAATAGTGG+TGG 0.724076 6_3:+48456135 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAAATTAATGTATTTT+TGG - chr6_3:48455576-48455595 Msa0953070:intron 10.0%
!!! TATCAAAATTAATGTATTTT+TGG - chr6_3:48455576-48455595 Msa0953070:intron 10.0%
!! ACTAAAAATATCTGTTTATT+TGG + chr6_3:48455841-48455860 None:intergenic 15.0%
!! ACTAAAAATATCTGTTTATT+TGG + chr6_3:48455841-48455860 None:intergenic 15.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_3:48454338-48454357 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_3:48454339-48454358 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_3:48455167-48455186 Msa0953070:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_3:48455592-48455611 Msa0953070:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_3:48455637-48455656 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+AGG + chr6_3:48455751-48455770 None:intergenic 20.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_3:48454338-48454357 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_3:48454339-48454358 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_3:48455167-48455186 Msa0953070:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_3:48455592-48455611 Msa0953070:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_3:48455637-48455656 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+AGG + chr6_3:48455751-48455770 None:intergenic 20.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_3:48454337-48454356 None:intergenic 25.0%
! AAGTGTTTGACAATCAAAAA+AGG + chr6_3:48454568-48454587 None:intergenic 25.0%
! AACAAGAAATCCAATCAAAT+GGG - chr6_3:48454595-48454614 Msa0953070:CDS 25.0%
! AAGCAAAAAATTCAAGAATC+AGG - chr6_3:48455048-48455067 Msa0953070:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_3:48455176-48455195 Msa0953070:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_3:48455252-48455271 Msa0953070:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_3:48455365-48455384 Msa0953070:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_3:48455777-48455796 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_3:48455779-48455798 Msa0953070:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_3:48455780-48455799 Msa0953070:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_3:48455875-48455894 Msa0953070:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_3:48455914-48455933 Msa0953070:CDS 25.0%
!! CTATAAGTTCAGTTTTTGAA+GGG + chr6_3:48456245-48456264 None:intergenic 25.0%
!! TCTATAAGTTCAGTTTTTGA+AGG + chr6_3:48456246-48456265 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_3:48456306-48456325 None:intergenic 25.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_3:48454337-48454356 None:intergenic 25.0%
! AAGTGTTTGACAATCAAAAA+AGG + chr6_3:48454568-48454587 None:intergenic 25.0%
! AACAAGAAATCCAATCAAAT+GGG - chr6_3:48454595-48454614 Msa0953070:CDS 25.0%
! AAGCAAAAAATTCAAGAATC+AGG - chr6_3:48455048-48455067 Msa0953070:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_3:48455176-48455195 Msa0953070:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_3:48455252-48455271 Msa0953070:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_3:48455365-48455384 Msa0953070:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_3:48455777-48455796 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_3:48455779-48455798 Msa0953070:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_3:48455780-48455799 Msa0953070:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_3:48455875-48455894 Msa0953070:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_3:48455914-48455933 Msa0953070:CDS 25.0%
!! CTATAAGTTCAGTTTTTGAA+GGG + chr6_3:48456245-48456264 None:intergenic 25.0%
!! TCTATAAGTTCAGTTTTTGA+AGG + chr6_3:48456246-48456265 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_3:48456306-48456325 None:intergenic 25.0%
TTGAGGAGATATGACATTAT+TGG + chr6_3:48454250-48454269 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_3:48454330-48454349 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_3:48454509-48454528 None:intergenic 30.0%
GTTTGACAATCAAAAAAGGT+GGG + chr6_3:48454564-48454583 None:intergenic 30.0%
TGTTTGACAATCAAAAAAGG+TGG + chr6_3:48454565-48454584 None:intergenic 30.0%
CAACAAGAAATCCAATCAAA+TGG - chr6_3:48454594-48454613 Msa0953070:CDS 30.0%
TTGAAATTATTGGTAGGCAT+GGG + chr6_3:48454663-48454682 None:intergenic 30.0%
ATTGAAATTATTGGTAGGCA+TGG + chr6_3:48454664-48454683 None:intergenic 30.0%
!! GGAGTATTGAAATTATTGGT+AGG + chr6_3:48454669-48454688 None:intergenic 30.0%
! AGTGATAATGTTAGTCAAGT+TGG + chr6_3:48454817-48454836 None:intergenic 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_3:48454864-48454883 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_3:48454868-48454887 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_3:48454912-48454931 None:intergenic 30.0%
ATTAGGTAAAATCCTAGATC+TGG + chr6_3:48455015-48455034 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+AGG + chr6_3:48455032-48455051 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_3:48455253-48455272 Msa0953070:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_3:48455288-48455307 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_3:48455364-48455383 Msa0953070:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_3:48455378-48455397 Msa0953070:CDS 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_3:48455770-48455789 None:intergenic 30.0%
!!! ATTTACCTGTTGGTTTTTCA+TGG + chr6_3:48456047-48456066 None:intergenic 30.0%
ATGAAAAACCAACAGGTAAA+TGG - chr6_3:48456046-48456065 Msa0953070:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_3:48456473-48456492 Msa0953070:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_3:48456509-48456528 None:intergenic 30.0%
TTGAGGAGATATGACATTAT+TGG + chr6_3:48454250-48454269 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_3:48454330-48454349 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_3:48454509-48454528 None:intergenic 30.0%
GTTTGACAATCAAAAAAGGT+GGG + chr6_3:48454564-48454583 None:intergenic 30.0%
TGTTTGACAATCAAAAAAGG+TGG + chr6_3:48454565-48454584 None:intergenic 30.0%
CAACAAGAAATCCAATCAAA+TGG - chr6_3:48454594-48454613 Msa0953070:CDS 30.0%
TTGAAATTATTGGTAGGCAT+GGG + chr6_3:48454663-48454682 None:intergenic 30.0%
ATTGAAATTATTGGTAGGCA+TGG + chr6_3:48454664-48454683 None:intergenic 30.0%
!! GGAGTATTGAAATTATTGGT+AGG + chr6_3:48454669-48454688 None:intergenic 30.0%
! AGTGATAATGTTAGTCAAGT+TGG + chr6_3:48454817-48454836 None:intergenic 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_3:48454864-48454883 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_3:48454868-48454887 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_3:48454912-48454931 None:intergenic 30.0%
ATTAGGTAAAATCCTAGATC+TGG + chr6_3:48455015-48455034 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+AGG + chr6_3:48455032-48455051 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_3:48455253-48455272 Msa0953070:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_3:48455288-48455307 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_3:48455364-48455383 Msa0953070:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_3:48455378-48455397 Msa0953070:CDS 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_3:48455770-48455789 None:intergenic 30.0%
!!! ATTTACCTGTTGGTTTTTCA+TGG + chr6_3:48456047-48456066 None:intergenic 30.0%
ATGAAAAACCAACAGGTAAA+TGG - chr6_3:48456046-48456065 Msa0953070:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_3:48456473-48456492 Msa0953070:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_3:48456509-48456528 None:intergenic 30.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_3:48454140-48454159 Msa0953070:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_3:48454187-48454206 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_3:48454244-48454263 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_3:48454247-48454266 None:intergenic 35.0%
!! TACAATGGTGGGATATTTTG+AGG + chr6_3:48454267-48454286 None:intergenic 35.0%
CTAAAACCATCAACGTACAA+TGG + chr6_3:48454282-48454301 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_3:48454463-48454482 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_3:48454464-48454483 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_3:48454505-48454524 None:intergenic 35.0%
TGAAATTATTGGTAGGCATG+GGG + chr6_3:48454662-48454681 None:intergenic 35.0%
!! GGTGGGAGTATTGAAATTAT+TGG + chr6_3:48454673-48454692 None:intergenic 35.0%
!! GAGTGAAAAAAGTTGATGTG+GGG + chr6_3:48454758-48454777 None:intergenic 35.0%
!! GGAGTGAAAAAAGTTGATGT+GGG + chr6_3:48454759-48454778 None:intergenic 35.0%
!! GATAATGTTAGTCAAGTTGG+TGG + chr6_3:48454814-48454833 None:intergenic 35.0%
AACATTATCACTAGTGTTCG+TGG - chr6_3:48454825-48454844 Msa0953070:intron 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_3:48454853-48454872 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_3:48454973-48454992 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_3:48454974-48454993 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_3:48454975-48454994 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_3:48455008-48455027 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_3:48455009-48455028 None:intergenic 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_3:48455384-48455403 None:intergenic 35.0%
! CTGAATTGTGGTCTTAATCT+AGG - chr6_3:48455430-48455449 Msa0953070:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_3:48455783-48455802 Msa0953070:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_3:48455784-48455803 Msa0953070:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_3:48456012-48456031 Msa0953070:CDS 35.0%
ATGAAGTTCCATTTACCTGT+TGG + chr6_3:48456057-48456076 None:intergenic 35.0%
ACAGGTAAATGGAACTTCAT+TGG - chr6_3:48456057-48456076 Msa0953070:CDS 35.0%
GTAAATGGAACTTCATTGGT+GGG - chr6_3:48456061-48456080 Msa0953070:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_3:48456091-48456110 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_3:48456092-48456111 None:intergenic 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_3:48456227-48456246 None:intergenic 35.0%
TGATTCAATTTCTCTAGCAG+CGG + chr6_3:48456280-48456299 None:intergenic 35.0%
! TAAGTTTGTTTCCTGAAGGA+AGG + chr6_3:48456404-48456423 None:intergenic 35.0%
! CCAATAAGTTTGTTTCCTGA+AGG + chr6_3:48456408-48456427 None:intergenic 35.0%
CCTTCAGGAAACAAACTTAT+TGG - chr6_3:48456405-48456424 Msa0953070:CDS 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_3:48456506-48456525 None:intergenic 35.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_3:48454140-48454159 Msa0953070:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_3:48454187-48454206 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_3:48454244-48454263 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_3:48454247-48454266 None:intergenic 35.0%
!! TACAATGGTGGGATATTTTG+AGG + chr6_3:48454267-48454286 None:intergenic 35.0%
CTAAAACCATCAACGTACAA+TGG + chr6_3:48454282-48454301 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_3:48454463-48454482 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_3:48454464-48454483 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_3:48454505-48454524 None:intergenic 35.0%
TGAAATTATTGGTAGGCATG+GGG + chr6_3:48454662-48454681 None:intergenic 35.0%
!! GGTGGGAGTATTGAAATTAT+TGG + chr6_3:48454673-48454692 None:intergenic 35.0%
!! GAGTGAAAAAAGTTGATGTG+GGG + chr6_3:48454758-48454777 None:intergenic 35.0%
!! GGAGTGAAAAAAGTTGATGT+GGG + chr6_3:48454759-48454778 None:intergenic 35.0%
!! GATAATGTTAGTCAAGTTGG+TGG + chr6_3:48454814-48454833 None:intergenic 35.0%
AACATTATCACTAGTGTTCG+TGG - chr6_3:48454825-48454844 Msa0953070:intron 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_3:48454853-48454872 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_3:48454973-48454992 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_3:48454974-48454993 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_3:48454975-48454994 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_3:48455008-48455027 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_3:48455009-48455028 None:intergenic 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_3:48455384-48455403 None:intergenic 35.0%
! CTGAATTGTGGTCTTAATCT+AGG - chr6_3:48455430-48455449 Msa0953070:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_3:48455783-48455802 Msa0953070:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_3:48455784-48455803 Msa0953070:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_3:48456012-48456031 Msa0953070:CDS 35.0%
ATGAAGTTCCATTTACCTGT+TGG + chr6_3:48456057-48456076 None:intergenic 35.0%
ACAGGTAAATGGAACTTCAT+TGG - chr6_3:48456057-48456076 Msa0953070:CDS 35.0%
GTAAATGGAACTTCATTGGT+GGG - chr6_3:48456061-48456080 Msa0953070:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_3:48456091-48456110 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_3:48456092-48456111 None:intergenic 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_3:48456227-48456246 None:intergenic 35.0%
TGATTCAATTTCTCTAGCAG+CGG + chr6_3:48456280-48456299 None:intergenic 35.0%
! TAAGTTTGTTTCCTGAAGGA+AGG + chr6_3:48456404-48456423 None:intergenic 35.0%
! CCAATAAGTTTGTTTCCTGA+AGG + chr6_3:48456408-48456427 None:intergenic 35.0%
CCTTCAGGAAACAAACTTAT+TGG - chr6_3:48456405-48456424 Msa0953070:CDS 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_3:48456506-48456525 None:intergenic 35.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_3:48454145-48454164 None:intergenic 40.0%
TTCAATAAAAGAGGCGAGGT+TGG + chr6_3:48454178-48454197 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_3:48454203-48454222 None:intergenic 40.0%
AACCATCAACGTACAATGGT+GGG + chr6_3:48454278-48454297 None:intergenic 40.0%
AAACCATCAACGTACAATGG+TGG + chr6_3:48454279-48454298 None:intergenic 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_3:48454310-48454329 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_3:48454311-48454330 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_3:48454323-48454342 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_3:48454324-48454343 None:intergenic 40.0%
ATAGTGGTAGTAGTTGGGAT+GGG + chr6_3:48454414-48454433 None:intergenic 40.0%
! TTGGGATAGTGGTAGTAGTT+GGG + chr6_3:48454419-48454438 None:intergenic 40.0%
AAGTGGTTGTAATGAGGGTT+GGG + chr6_3:48454437-48454456 None:intergenic 40.0%
GGATGAAGTGGTTGTAATGA+GGG + chr6_3:48454442-48454461 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_3:48454454-48454473 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_3:48454465-48454484 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_3:48454498-48454517 Msa0953070:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_3:48454504-48454523 None:intergenic 40.0%
ATCACTAACACTAGTGCTCA+TGG - chr6_3:48454525-48454544 Msa0953070:CDS 40.0%
TCATGGGGGTAAATCTAGTT+GGG + chr6_3:48454713-48454732 None:intergenic 40.0%
!! CGGAGTGAAAAAAGTTGATG+TGG + chr6_3:48454760-48454779 None:intergenic 40.0%
!! AATGTTAGTCAAGTTGGTGG+TGG + chr6_3:48454811-48454830 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_3:48454972-48454991 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_3:48455000-48455019 Msa0953070:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_3:48455281-48455300 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_3:48455282-48455301 None:intergenic 40.0%
AAGACCACAATTCAGTGCAA+TGG + chr6_3:48455425-48455444 None:intergenic 40.0%
ACAAAAAAGTGACACCGAAG+AGG - chr6_3:48455987-48456006 Msa0953070:CDS 40.0%
!! CACAACAAAAGTGTCCTCTT+CGG + chr6_3:48456004-48456023 None:intergenic 40.0%
CACAACCATGAAAAACCAAC+AGG - chr6_3:48456039-48456058 Msa0953070:CDS 40.0%
GGTAAATGGAACTTCATTGG+TGG - chr6_3:48456060-48456079 Msa0953070:CDS 40.0%
GTCACCAAACATTTCAAAGC+CGG - chr6_3:48456140-48456159 Msa0953070:CDS 40.0%
TCACCAAACATTTCAAAGCC+GGG - chr6_3:48456141-48456160 Msa0953070:CDS 40.0%
!! ATCGTCACATTTTGAGAACC+CGG + chr6_3:48456162-48456181 None:intergenic 40.0%
GAAGGGATTTCTGATTGACT+AGG + chr6_3:48456228-48456247 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+GGG + chr6_3:48456279-48456298 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_3:48456376-48456395 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_3:48456388-48456407 None:intergenic 40.0%
GAATCACAAATCCTTCCTTC+AGG - chr6_3:48456390-48456409 Msa0953070:CDS 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_3:48456462-48456481 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_3:48456461-48456480 Msa0953070:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_3:48456495-48456514 Msa0953070:CDS 40.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_3:48454145-48454164 None:intergenic 40.0%
TTCAATAAAAGAGGCGAGGT+TGG + chr6_3:48454178-48454197 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_3:48454203-48454222 None:intergenic 40.0%
AACCATCAACGTACAATGGT+GGG + chr6_3:48454278-48454297 None:intergenic 40.0%
AAACCATCAACGTACAATGG+TGG + chr6_3:48454279-48454298 None:intergenic 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_3:48454310-48454329 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_3:48454311-48454330 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_3:48454323-48454342 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_3:48454324-48454343 None:intergenic 40.0%
ATAGTGGTAGTAGTTGGGAT+GGG + chr6_3:48454414-48454433 None:intergenic 40.0%
! TTGGGATAGTGGTAGTAGTT+GGG + chr6_3:48454419-48454438 None:intergenic 40.0%
AAGTGGTTGTAATGAGGGTT+GGG + chr6_3:48454437-48454456 None:intergenic 40.0%
GGATGAAGTGGTTGTAATGA+GGG + chr6_3:48454442-48454461 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_3:48454454-48454473 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_3:48454465-48454484 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_3:48454498-48454517 Msa0953070:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_3:48454504-48454523 None:intergenic 40.0%
ATCACTAACACTAGTGCTCA+TGG - chr6_3:48454525-48454544 Msa0953070:CDS 40.0%
TCATGGGGGTAAATCTAGTT+GGG + chr6_3:48454713-48454732 None:intergenic 40.0%
!! CGGAGTGAAAAAAGTTGATG+TGG + chr6_3:48454760-48454779 None:intergenic 40.0%
!! AATGTTAGTCAAGTTGGTGG+TGG + chr6_3:48454811-48454830 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_3:48454972-48454991 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_3:48455000-48455019 Msa0953070:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_3:48455281-48455300 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_3:48455282-48455301 None:intergenic 40.0%
AAGACCACAATTCAGTGCAA+TGG + chr6_3:48455425-48455444 None:intergenic 40.0%
ACAAAAAAGTGACACCGAAG+AGG - chr6_3:48455987-48456006 Msa0953070:CDS 40.0%
!! CACAACAAAAGTGTCCTCTT+CGG + chr6_3:48456004-48456023 None:intergenic 40.0%
CACAACCATGAAAAACCAAC+AGG - chr6_3:48456039-48456058 Msa0953070:CDS 40.0%
GGTAAATGGAACTTCATTGG+TGG - chr6_3:48456060-48456079 Msa0953070:CDS 40.0%
GTCACCAAACATTTCAAAGC+CGG - chr6_3:48456140-48456159 Msa0953070:CDS 40.0%
TCACCAAACATTTCAAAGCC+GGG - chr6_3:48456141-48456160 Msa0953070:CDS 40.0%
!! ATCGTCACATTTTGAGAACC+CGG + chr6_3:48456162-48456181 None:intergenic 40.0%
GAAGGGATTTCTGATTGACT+AGG + chr6_3:48456228-48456247 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+GGG + chr6_3:48456279-48456298 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_3:48456376-48456395 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_3:48456388-48456407 None:intergenic 40.0%
GAATCACAAATCCTTCCTTC+AGG - chr6_3:48456390-48456409 Msa0953070:CDS 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_3:48456462-48456481 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_3:48456461-48456480 Msa0953070:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_3:48456495-48456514 Msa0953070:CDS 40.0%
!! AAAAGAGGCGAGGTTGGTAA+AGG + chr6_3:48454172-48454191 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+AGG + chr6_3:48454182-48454201 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_3:48454202-48454221 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_3:48454204-48454223 None:intergenic 45.0%
! ACAGTGGTTGGTGTTTGAGA+TGG + chr6_3:48454210-48454229 None:intergenic 45.0%
!! ATTATTGGTGGTGGAAGTGG+TGG + chr6_3:48454235-48454254 None:intergenic 45.0%
!! GACATTATTGGTGGTGGAAG+TGG + chr6_3:48454238-48454257 None:intergenic 45.0%
ATCCCACCATTGTACGTTGA+TGG - chr6_3:48454273-48454292 Msa0953070:CDS 45.0%
TAGTGGTAGTAGTTGGGATG+GGG + chr6_3:48454413-48454432 None:intergenic 45.0%
! GATAGTGGTAGTAGTTGGGA+TGG + chr6_3:48454415-48454434 None:intergenic 45.0%
! GTTGGGATAGTGGTAGTAGT+TGG + chr6_3:48454420-48454439 None:intergenic 45.0%
TGTAATGAGGGTTGGGATAG+TGG + chr6_3:48454430-48454449 None:intergenic 45.0%
GAAGTGGTTGTAATGAGGGT+TGG + chr6_3:48454438-48454457 None:intergenic 45.0%
GGGATGAAGTGGTTGTAATG+AGG + chr6_3:48454443-48454462 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_3:48454496-48454515 None:intergenic 45.0%
TTAGCTCGTGCCCATTTGAT+TGG + chr6_3:48454608-48454627 None:intergenic 45.0%
ATTGGTAGGCATGGGGTTAA+CGG + chr6_3:48454655-48454674 None:intergenic 45.0%
GTAAATCTAGTTGGGGTGCA+AGG + chr6_3:48454705-48454724 None:intergenic 45.0%
CATGGGGGTAAATCTAGTTG+GGG + chr6_3:48454712-48454731 None:intergenic 45.0%
GTCATGGGGGTAAATCTAGT+TGG + chr6_3:48454714-48454733 None:intergenic 45.0%
! AGAGCTTGCTTGTTCTCACA+TGG + chr6_3:48455206-48455225 None:intergenic 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_3:48455234-48455253 Msa0953070:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_3:48455280-48455299 None:intergenic 45.0%
ATTCAGTGCAATGGCAAGGA+TGG + chr6_3:48455416-48455435 None:intergenic 45.0%
CACAATTCAGTGCAATGGCA+AGG + chr6_3:48455420-48455439 None:intergenic 45.0%
CTTGCCATTGCACTGAATTG+TGG - chr6_3:48455418-48455437 Msa0953070:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_3:48456088-48456107 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_3:48456105-48456124 Msa0953070:CDS 45.0%
TACCCGCTGTTGGAAATTTC+AGG - chr6_3:48456115-48456134 Msa0953070:CDS 45.0%
GACCTGAAATTTCCAACAGC+GGG + chr6_3:48456120-48456139 None:intergenic 45.0%
CGACCTGAAATTTCCAACAG+CGG + chr6_3:48456121-48456140 None:intergenic 45.0%
!! GAACCCGGCTTTGAAATGTT+TGG + chr6_3:48456147-48456166 None:intergenic 45.0%
TTCTCTAGCAGCGGGTAAAT+GGG + chr6_3:48456271-48456290 None:intergenic 45.0%
TTTCTCTAGCAGCGGGTAAA+TGG + chr6_3:48456272-48456291 None:intergenic 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_3:48456360-48456379 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_3:48456366-48456385 Msa0953070:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_3:48456377-48456396 None:intergenic 45.0%
!! AAAAGAGGCGAGGTTGGTAA+AGG + chr6_3:48454172-48454191 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+AGG + chr6_3:48454182-48454201 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_3:48454202-48454221 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_3:48454204-48454223 None:intergenic 45.0%
! ACAGTGGTTGGTGTTTGAGA+TGG + chr6_3:48454210-48454229 None:intergenic 45.0%
!! ATTATTGGTGGTGGAAGTGG+TGG + chr6_3:48454235-48454254 None:intergenic 45.0%
!! GACATTATTGGTGGTGGAAG+TGG + chr6_3:48454238-48454257 None:intergenic 45.0%
ATCCCACCATTGTACGTTGA+TGG - chr6_3:48454273-48454292 Msa0953070:CDS 45.0%
TAGTGGTAGTAGTTGGGATG+GGG + chr6_3:48454413-48454432 None:intergenic 45.0%
! GATAGTGGTAGTAGTTGGGA+TGG + chr6_3:48454415-48454434 None:intergenic 45.0%
! GTTGGGATAGTGGTAGTAGT+TGG + chr6_3:48454420-48454439 None:intergenic 45.0%
TGTAATGAGGGTTGGGATAG+TGG + chr6_3:48454430-48454449 None:intergenic 45.0%
GAAGTGGTTGTAATGAGGGT+TGG + chr6_3:48454438-48454457 None:intergenic 45.0%
GGGATGAAGTGGTTGTAATG+AGG + chr6_3:48454443-48454462 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_3:48454496-48454515 None:intergenic 45.0%
TTAGCTCGTGCCCATTTGAT+TGG + chr6_3:48454608-48454627 None:intergenic 45.0%
ATTGGTAGGCATGGGGTTAA+CGG + chr6_3:48454655-48454674 None:intergenic 45.0%
GTAAATCTAGTTGGGGTGCA+AGG + chr6_3:48454705-48454724 None:intergenic 45.0%
CATGGGGGTAAATCTAGTTG+GGG + chr6_3:48454712-48454731 None:intergenic 45.0%
GTCATGGGGGTAAATCTAGT+TGG + chr6_3:48454714-48454733 None:intergenic 45.0%
! AGAGCTTGCTTGTTCTCACA+TGG + chr6_3:48455206-48455225 None:intergenic 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_3:48455234-48455253 Msa0953070:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_3:48455280-48455299 None:intergenic 45.0%
ATTCAGTGCAATGGCAAGGA+TGG + chr6_3:48455416-48455435 None:intergenic 45.0%
CACAATTCAGTGCAATGGCA+AGG + chr6_3:48455420-48455439 None:intergenic 45.0%
CTTGCCATTGCACTGAATTG+TGG - chr6_3:48455418-48455437 Msa0953070:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_3:48456088-48456107 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_3:48456105-48456124 Msa0953070:CDS 45.0%
TACCCGCTGTTGGAAATTTC+AGG - chr6_3:48456115-48456134 Msa0953070:CDS 45.0%
GACCTGAAATTTCCAACAGC+GGG + chr6_3:48456120-48456139 None:intergenic 45.0%
CGACCTGAAATTTCCAACAG+CGG + chr6_3:48456121-48456140 None:intergenic 45.0%
!! GAACCCGGCTTTGAAATGTT+TGG + chr6_3:48456147-48456166 None:intergenic 45.0%
TTCTCTAGCAGCGGGTAAAT+GGG + chr6_3:48456271-48456290 None:intergenic 45.0%
TTTCTCTAGCAGCGGGTAAA+TGG + chr6_3:48456272-48456291 None:intergenic 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_3:48456360-48456379 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_3:48456366-48456385 Msa0953070:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_3:48456377-48456396 None:intergenic 45.0%
!!! TTAAGATAAATAAATTTTAT+TGG + chr6_3:48455720-48455739 None:intergenic 5.0%
!!! TTAAGATAAATAAATTTTAT+TGG + chr6_3:48455720-48455739 None:intergenic 5.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_3:48454305-48454324 None:intergenic 50.0%
AGTGGTAGTAGTTGGGATGG+GGG + chr6_3:48454412-48454431 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_3:48454493-48454512 None:intergenic 50.0%
TTGGTAGGCATGGGGTTAAC+GGG + chr6_3:48454654-48454673 None:intergenic 50.0%
!! AAGGCGTTGGTAGTGGTCAT+GGG + chr6_3:48454729-48454748 None:intergenic 50.0%
! AGTTGATGTGGGGTTAGCGA+AGG + chr6_3:48454748-48454767 None:intergenic 50.0%
! TTTTTCACTCCGACCACCAC+TGG - chr6_3:48454768-48454787 Msa0953070:intron 50.0%
CTAATAGGTCCAGTGGTGGT+CGG + chr6_3:48454780-48454799 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGTGCTA+GGG + chr6_3:48454803-48454822 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_3:48454963-48454982 None:intergenic 50.0%
GAGAACAAGCAAGCTCTCAG+AGG - chr6_3:48455209-48455228 Msa0953070:intron 50.0%
CAAGCAAGCTCTCAGAGGAT+TGG - chr6_3:48455214-48455233 Msa0953070:intron 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_3:48455790-48455809 Msa0953070:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_3:48455791-48455810 Msa0953070:CDS 50.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_3:48454305-48454324 None:intergenic 50.0%
AGTGGTAGTAGTTGGGATGG+GGG + chr6_3:48454412-48454431 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_3:48454493-48454512 None:intergenic 50.0%
TTGGTAGGCATGGGGTTAAC+GGG + chr6_3:48454654-48454673 None:intergenic 50.0%
!! AAGGCGTTGGTAGTGGTCAT+GGG + chr6_3:48454729-48454748 None:intergenic 50.0%
! AGTTGATGTGGGGTTAGCGA+AGG + chr6_3:48454748-48454767 None:intergenic 50.0%
! TTTTTCACTCCGACCACCAC+TGG - chr6_3:48454768-48454787 Msa0953070:intron 50.0%
CTAATAGGTCCAGTGGTGGT+CGG + chr6_3:48454780-48454799 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGTGCTA+GGG + chr6_3:48454803-48454822 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_3:48454963-48454982 None:intergenic 50.0%
GAGAACAAGCAAGCTCTCAG+AGG - chr6_3:48455209-48455228 Msa0953070:intron 50.0%
CAAGCAAGCTCTCAGAGGAT+TGG - chr6_3:48455214-48455233 Msa0953070:intron 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_3:48455790-48455809 Msa0953070:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_3:48455791-48455810 Msa0953070:CDS 50.0%
! GAAGTGGTGGTGACAGTGGT+TGG + chr6_3:48454222-48454241 None:intergenic 55.0%
!! TTGGAGAGAGGTGGTGGGAT+TGG + chr6_3:48454388-48454407 None:intergenic 55.0%
TAGTAGTTGGGATGGGGGCT+TGG + chr6_3:48454407-48454426 None:intergenic 55.0%
TAGTGGTGGTCGAAGGGGTT+TGG + chr6_3:48454479-48454498 None:intergenic 55.0%
GGGAATAGTGGTGGTCGAAG+GGG + chr6_3:48454484-48454503 None:intergenic 55.0%
CGGGAATAGTGGTGGTCGAA+GGG + chr6_3:48454485-48454504 None:intergenic 55.0%
TCGGGAATAGTGGTGGTCGA+AGG + chr6_3:48454486-48454505 None:intergenic 55.0%
GTGCAAGGAGTAGTGAGGGT+GGG + chr6_3:48454690-48454709 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_3:48454694-48454713 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_3:48454695-48454714 None:intergenic 55.0%
!! AGGCGTTGGTAGTGGTCATG+GGG + chr6_3:48454728-48454747 None:intergenic 55.0%
!! GAAGGCGTTGGTAGTGGTCA+TGG + chr6_3:48454730-48454749 None:intergenic 55.0%
!! GTTAGCGAAGGCGTTGGTAG+TGG + chr6_3:48454736-48454755 None:intergenic 55.0%
AGGGCTAATAGGTCCAGTGG+TGG + chr6_3:48454784-48454803 None:intergenic 55.0%
GCTAGGGCTAATAGGTCCAG+TGG + chr6_3:48454787-48454806 None:intergenic 55.0%
! GTGGTGGTGCTAGGGCTAAT+AGG + chr6_3:48454795-48454814 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGTGCT+AGG + chr6_3:48454804-48454823 None:intergenic 55.0%
GCAAGCTCTCAGAGGATTGG+TGG - chr6_3:48455217-48455236 Msa0953070:intron 55.0%
! TCTCAGAGGATTGGTGGTCG+TGG - chr6_3:48455223-48455242 Msa0953070:intron 55.0%
! GAAGTGGTGGTGACAGTGGT+TGG + chr6_3:48454222-48454241 None:intergenic 55.0%
!! TTGGAGAGAGGTGGTGGGAT+TGG + chr6_3:48454388-48454407 None:intergenic 55.0%
TAGTAGTTGGGATGGGGGCT+TGG + chr6_3:48454407-48454426 None:intergenic 55.0%
TAGTGGTGGTCGAAGGGGTT+TGG + chr6_3:48454479-48454498 None:intergenic 55.0%
GGGAATAGTGGTGGTCGAAG+GGG + chr6_3:48454484-48454503 None:intergenic 55.0%
CGGGAATAGTGGTGGTCGAA+GGG + chr6_3:48454485-48454504 None:intergenic 55.0%
TCGGGAATAGTGGTGGTCGA+AGG + chr6_3:48454486-48454505 None:intergenic 55.0%
GTGCAAGGAGTAGTGAGGGT+GGG + chr6_3:48454690-48454709 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_3:48454694-48454713 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_3:48454695-48454714 None:intergenic 55.0%
!! AGGCGTTGGTAGTGGTCATG+GGG + chr6_3:48454728-48454747 None:intergenic 55.0%
!! GAAGGCGTTGGTAGTGGTCA+TGG + chr6_3:48454730-48454749 None:intergenic 55.0%
!! GTTAGCGAAGGCGTTGGTAG+TGG + chr6_3:48454736-48454755 None:intergenic 55.0%
AGGGCTAATAGGTCCAGTGG+TGG + chr6_3:48454784-48454803 None:intergenic 55.0%
GCTAGGGCTAATAGGTCCAG+TGG + chr6_3:48454787-48454806 None:intergenic 55.0%
! GTGGTGGTGCTAGGGCTAAT+AGG + chr6_3:48454795-48454814 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGTGCT+AGG + chr6_3:48454804-48454823 None:intergenic 55.0%
GCAAGCTCTCAGAGGATTGG+TGG - chr6_3:48455217-48455236 Msa0953070:intron 55.0%
! TCTCAGAGGATTGGTGGTCG+TGG - chr6_3:48455223-48455242 Msa0953070:intron 55.0%
! GGTGGAAGTGGTGGTGACAG+TGG + chr6_3:48454226-48454245 None:intergenic 60.0%
GGTGCAAGGAGTAGTGAGGG+TGG + chr6_3:48454691-48454710 None:intergenic 60.0%
!! GGCGTTGGTAGTGGTCATGG+GGG + chr6_3:48454727-48454746 None:intergenic 60.0%
! TGTGGGGTTAGCGAAGGCGT+TGG + chr6_3:48454742-48454761 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_3:48455268-48455287 Msa0953070:intron 60.0%
! GGTGGAAGTGGTGGTGACAG+TGG + chr6_3:48454226-48454245 None:intergenic 60.0%
GGTGCAAGGAGTAGTGAGGG+TGG + chr6_3:48454691-48454710 None:intergenic 60.0%
!! GGCGTTGGTAGTGGTCATGG+GGG + chr6_3:48454727-48454746 None:intergenic 60.0%
! TGTGGGGTTAGCGAAGGCGT+TGG + chr6_3:48454742-48454761 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_3:48455268-48455287 Msa0953070:intron 60.0%
GGGGCTTGGAGAGAGGTGGT+GGG + chr6_3:48454393-48454412 None:intergenic 65.0%
GATGGGGGCTTGGAGAGAGG+TGG + chr6_3:48454397-48454416 None:intergenic 65.0%
TGGGATGGGGGCTTGGAGAG+AGG + chr6_3:48454400-48454419 None:intergenic 65.0%
GGGGCTTGGAGAGAGGTGGT+GGG + chr6_3:48454393-48454412 None:intergenic 65.0%
GATGGGGGCTTGGAGAGAGG+TGG + chr6_3:48454397-48454416 None:intergenic 65.0%
TGGGATGGGGGCTTGGAGAG+AGG + chr6_3:48454400-48454419 None:intergenic 65.0%
GGGGGCTTGGAGAGAGGTGG+TGG + chr6_3:48454394-48454413 None:intergenic 70.0%
GGGGGCTTGGAGAGAGGTGG+TGG + chr6_3:48454394-48454413 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 48454114 48456533 48454114 ID=Msa0953070;Name=Msa0953070
chr6_3 mRNA 48454114 48456533 48454114 ID=Msa0953070-mRNA-1;Parent=Msa0953070;Name=Msa0953070-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|556
chr6_3 exon 48455578 48456533 48455578 ID=Msa0953070-mRNA-1:exon:10666;Parent=Msa0953070-mRNA-1
chr6_3 exon 48455358 48455474 48455358 ID=Msa0953070-mRNA-1:exon:10665;Parent=Msa0953070-mRNA-1
chr6_3 exon 48454114 48454711 48454114 ID=Msa0953070-mRNA-1:exon:10664;Parent=Msa0953070-mRNA-1
chr6_3 CDS 48455578 48456533 48455578 ID=Msa0953070-mRNA-1:cds;Parent=Msa0953070-mRNA-1
chr6_3 CDS 48455358 48455474 48455358 ID=Msa0953070-mRNA-1:cds;Parent=Msa0953070-mRNA-1
chr6_3 CDS 48454114 48454711 48454114 ID=Msa0953070-mRNA-1:cds;Parent=Msa0953070-mRNA-1
Gene Sequence

>Msa0953070

ATGGACATTGACGATTGGGATCTCTTTTCCTTTGTCAATAGCAACAAGGCTACAACCTTTACCAACCTCGCCTCTTTTATTGAAACCCCATCTCCATCTCAAACACCAACCACTGTCACCACCACTTCCACCACCAATAATGTCATATCTCCTCAAAATATCCCACCATTGTACGTTGATGGTTTTAGCCTTGCCCAAGACAATAACCCTGTTCCTTTTTCCCCACTTAAACAAAATGATTTCATAGATCTAGACAAATTGAAAATCAATTCCAATCCCACCACCTCTCTCCAAGCCCCCATCCCAACTACTACCACTATCCCAACCCTCATTACAACCACTTCATCCCCAATCACTATTATCCAAACCCCTTCGACCACCACTATTCCCGACCACATAACATTTGGTACAATCACTAACACTAGTGCTCATGGTTTCAATAAAAAACCCACCTTTTTTGATTGTCAAACACTTATCGAACAACAAGAAATCCAATCAAATGGGCACGAGCTAAATAAATTTATATTCAACAAAAATCCCGTTAACCCCATGCCTACCAATAATTTCAATACTCCCACCCTCACTACTCCTTGCACCCCAACTAGATTTACCCCCATGACCACTACCAACGCCTTCGCTAACCCCACATCAACTTTTTTCACTCCGACCACCACTGGACCTATTAGCCCTAGCACCACCACCAACTTGACTAACATTATCACTAGTGTTCGTGGAACCAGTCAATATCCTACCATTTCAGATTATGCAATACTCATCAAACAACAACAAATTCAACCAAACAATAACAGTCAAGTGTTTGATCATGCATACAACTATTCATTTGTTCCACAACAACCCCCAAGAAAGCTCAATCAATCACAAATTCAATTACCCAACACCAGATCTAGGATTTTACCTAATTCAGATTCACAAAAAGCAAAAAATTCAAGAATCAGAAAAATTAACAACAAGGTAACTTTGGAATGCCATGTGAGAACAAGCAAGCTCTCAGAGGATTGGTGGTCGTGGACAAAATATGGACAAAAAAACATTAGCGGGTCCCCACATCCAAGGAGCTACTTTAAATGTAGCAGTTCTAAAGATTGTTCAGCAAAAAAACTAGTACAAAAAAGTGACACCGAAGAGGACACTTTTGTTGTGACGTTTGTTGGAGCACACAACCATGAAAAACCAACAGGTAAATGGAACTTCATTGGTGGGACCTCCCAGAACAAGTCATCAAAGACTAGATTACCCGCTGTTGGAAATTTCAGGTCGTCACCAAACATTTCAAAGCCGGGTTCTCAAAATGTGACGATGATGCATGTCGATCATTTAAAGAGCATGAATATTCAAGTTCTCCCTAGTCAATCAGAAATCCCTTCAAAAACTGAACTTATAGAGACCCATTTACCCGCTGCTAGAGAAATTGAATCATCTCCTAATGTTGAAAACTTGTTTTCATATGATGTGACGATGCTACAATCTGATGAGCCAATGAGTAGCAATGCCCATGATTACTCCGGTGAATCACAAATCCTTCCTTCAGGAAACAAACTTATTGGAAACTCTGATGACGATGAAGAAATTATGATACCAAGCATGACTGATATGTCAGAGGATTTCTTATTGGATTTTGACCACCTCAATGATGGTTTTCTATTTCCTTAG
Protein sequence

>Msa0953070

MDIDDWDLFSFVNSNKATTFTNLASFIETPSPSQTPTTVTTTSTTNNVISPQNIPPLYVDGFSLAQDNNPVPFSPLKQNDFIDLDKLKINSNPTTSLQAPIPTTTTIPTLITTTSSPITIIQTPSTTTIPDHITFGTITNTSAHGFNKKPTFFDCQTLIEQQEIQSNGHELNKFIFNKNPVNPMPTNNFNTPTLTTPCTPTRFTPMTTTNAFANPTSTFFTPTTTGPISPSTTTNLTNIITSVRGTSQYPTISDYAILIKQQQIQPNNNSQVFDHAYNYSFVPQQPPRKLNQSQIQLPNTRSRILPNSDSQKAKNSRIRKINNKVTLECHVRTSKLSEDWWSWTKYGQKNISGSPHPRSYFKCSSSKDCSAKKLVQKSDTEEDTFVVTFVGAHNHEKPTGKWNFIGGTSQNKSSKTRLPAVGNFRSSPNISKPGSQNVTMMHVDHLKSMNIQVLPSQSEIPSKTELIETHLPAAREIESSPNVENLFSYDVTMLQSDEPMSSNAHDYSGESQILPSGNKLIGNSDDDEEIMIPSMTDMSEDFLLDFDHLNDGFLFP*