AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0955510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0955510 MtrunA17_Chr6g0470971 85.512 283 26 1 1 268 1 283 2.30e-178 492
Msa0955510 MtrunA17_Chr1g0203441 54.255 282 105 7 1 268 1 272 1.02e-92 275
Msa0955510 MtrunA17_Chr1g0211161 73.636 110 29 0 11 120 10 119 7.49e-54 174
Msa0955510 MtrunA17_Chr4g0058631 48.649 185 90 3 11 191 9 192 1.50e-52 174
Msa0955510 MtrunA17_Chr3g0117091 60.714 140 48 1 11 143 9 148 2.17e-52 174
Msa0955510 MtrunA17_Chr1g0193371 73.832 107 28 0 11 117 9 115 2.43e-52 174
Msa0955510 MtrunA17_Chr7g0270891 72.897 107 29 0 11 117 9 115 2.94e-51 171
Msa0955510 MtrunA17_Chr1g0193801 71.963 107 30 0 11 117 9 115 1.18e-50 170
Msa0955510 MtrunA17_Chr7g0271241 74.257 101 26 0 11 111 9 109 7.24e-50 168
Msa0955510 MtrunA17_Chr2g0330041 61.667 120 46 0 11 130 9 128 2.09e-48 165
Msa0955510 MtrunA17_Chr2g0309911 60.163 123 47 1 11 131 8 130 9.04e-48 161
Msa0955510 MtrunA17_Chr4g0032401 40.909 242 122 6 13 241 16 249 9.06e-48 161
Msa0955510 MtrunA17_Chr8g0387421 64.486 107 38 0 11 117 9 115 1.86e-47 160
Msa0955510 MtrunA17_Chr8g0342541 64.286 112 40 0 11 122 9 120 2.84e-47 160
Msa0955510 MtrunA17_Chr1g0203411 61.607 112 43 0 6 117 4 115 7.85e-47 158
Msa0955510 MtrunA17_Chr3g0088461 66.055 109 37 0 9 117 17 125 8.31e-47 159
Msa0955510 MtrunA17_Chr2g0328771 66.019 103 35 0 15 117 21 123 1.28e-46 158
Msa0955510 MtrunA17_Chr8g0342521 66.355 107 36 0 11 117 9 115 1.33e-46 159
Msa0955510 MtrunA17_Chr5g0397231 48.837 172 79 3 11 180 9 173 3.05e-46 157
Msa0955510 MtrunA17_Chr1g0167691 39.286 224 119 4 6 217 4 222 1.67e-45 153
Msa0955510 MtrunA17_Chr7g0274581 64.815 108 38 0 15 122 13 120 1.72e-45 152
Msa0955510 MtrunA17_Chr4g0044421 50.980 153 66 3 16 159 14 166 2.18e-45 151
Msa0955510 MtrunA17_Chr5g0435101 58.182 110 46 0 11 120 8 117 1.77e-44 149
Msa0955510 MtrunA17_Chr4g0022891 39.316 234 111 6 11 213 9 242 2.07e-44 150
Msa0955510 MtrunA17_Chr8g0342481 61.739 115 43 1 11 124 9 123 2.67e-44 154
Msa0955510 MtrunA17_Chr1g0187761 63.551 107 39 0 11 117 9 115 3.80e-44 150
Msa0955510 MtrunA17_Chr3g0115821 60.909 110 43 0 11 120 9 118 4.29e-44 152
Msa0955510 MtrunA17_Chr8g0385321 63.725 102 37 0 16 117 14 115 8.02e-44 150
Msa0955510 MtrunA17_Chr5g0395281 62.617 107 40 0 11 117 9 115 1.89e-43 149
Msa0955510 MtrunA17_Chr2g0281071 61.321 106 41 0 15 120 14 119 3.61e-43 150
Msa0955510 MtrunA17_Chr4g0037141 59.813 107 43 0 11 117 9 115 8.08e-43 147
Msa0955510 MtrunA17_Chr3g0131121 60.748 107 42 0 11 117 9 115 8.62e-43 147
Msa0955510 MtrunA17_Chr1g0167661 42.000 200 101 4 6 190 4 203 1.04e-42 146
Msa0955510 MtrunA17_Chr4g0057031 59.091 110 45 0 11 120 9 118 1.31e-42 146
Msa0955510 MtrunA17_Chr6g0453471 61.818 110 42 0 11 120 9 118 1.33e-42 149
Msa0955510 MtrunA17_Chr4g0039971 61.682 107 41 0 11 117 10 116 1.38e-42 148
Msa0955510 MtrunA17_Chr3g0110351 56.557 122 51 1 11 130 9 130 2.32e-42 147
Msa0955510 MtrunA17_Chr4g0048511 60.377 106 42 0 15 120 14 119 2.76e-42 148
Msa0955510 MtrunA17_Chr7g0217741 60.000 110 44 0 11 120 9 118 4.50e-42 146
Msa0955510 MtrunA17_Chr4g0022881 52.206 136 55 1 11 136 9 144 4.88e-42 144
Msa0955510 MtrunA17_Chr5g0434571 60.748 107 42 0 11 117 45 151 5.96e-42 147
Msa0955510 MtrunA17_Chr4g0042671 62.617 107 40 0 11 117 9 115 1.41e-41 147
Msa0955510 MtrunA17_Chr4g0070641 48.366 153 75 2 16 164 14 166 1.52e-41 140
Msa0955510 MtrunA17_Chr2g0323351 58.182 110 46 0 11 120 9 118 3.97e-41 142
Msa0955510 MtrunA17_Chr5g0410961 61.321 106 41 0 15 120 13 118 4.47e-41 144
Msa0955510 MtrunA17_Chr7g0261281 58.036 112 47 0 6 117 4 115 6.31e-41 142
Msa0955510 MtrunA17_Chr4g0022901 49.265 136 69 0 11 146 10 145 7.40e-41 142
Msa0955510 MtrunA17_Chr2g0311221 58.407 113 47 0 1 113 1 113 9.64e-41 143
Msa0955510 MtrunA17_Chr2g0323411 58.559 111 46 0 11 121 9 119 1.24e-40 142
Msa0955510 MtrunA17_Chr4g0070611 51.079 139 64 2 9 143 7 145 1.34e-40 142
Msa0955510 MtrunA17_Chr3g0103281 59.813 107 43 0 11 117 9 115 1.35e-40 142
Msa0955510 MtrunA17_Chr4g0022911 52.000 125 60 0 12 136 11 135 2.06e-40 141
Msa0955510 MtrunA17_Chr4g0022931 57.944 107 45 0 11 117 10 116 3.26e-40 140
Msa0955510 MtrunA17_Chr1g0186061 53.448 116 54 0 9 124 15 130 4.36e-40 139
Msa0955510 MtrunA17_Chr8g0343831 62.745 102 38 0 16 117 10 111 5.10e-40 139
Msa0955510 MtrunA17_Chr3g0121241 56.881 109 47 0 11 119 39 147 7.00e-40 140
Msa0955510 MtrunA17_Chr7g0228891 58.879 107 44 0 11 117 9 115 8.24e-40 139
Msa0955510 MtrunA17_Chr1g0168661 59.615 104 42 0 14 117 21 124 8.67e-40 139
Msa0955510 MtrunA17_Chr7g0217221 38.785 214 113 4 11 212 9 216 1.52e-39 138
Msa0955510 MtrunA17_Chr6g0452271 55.455 110 49 0 11 120 9 118 2.41e-39 139
Msa0955510 MtrunA17_Chr4g0068061 57.143 112 48 0 6 117 4 115 3.57e-39 139
Msa0955510 MtrunA17_Chr8g0346561 49.254 134 66 1 6 139 4 135 4.35e-39 138
Msa0955510 MtrunA17_Chr8g0349261 47.712 153 72 4 11 161 10 156 4.71e-39 138
Msa0955510 MtrunA17_Chr4g0055981 46.497 157 78 2 11 163 52 206 8.94e-39 135
Msa0955510 MtrunA17_Chr1g0194301 41.808 177 91 5 15 182 34 207 1.74e-38 135
Msa0955510 MtrunA17_Chr3g0135311 41.509 212 95 7 6 206 4 197 5.29e-38 136
Msa0955510 MtrunA17_Chr3g0092401 54.386 114 52 0 11 124 10 123 7.11e-38 135
Msa0955510 MtrunA17_Chr7g0275911 55.882 102 45 0 16 117 14 115 7.82e-38 133
Msa0955510 MtrunA17_Chr7g0254411 57.944 107 45 0 11 117 9 115 9.98e-38 135
Msa0955510 MtrunA17_Chr1g0151941 54.630 108 48 1 11 117 9 116 1.69e-37 132
Msa0955510 MtrunA17_Chr1g0152011 59.259 108 43 1 11 117 9 116 1.72e-37 135
Msa0955510 MtrunA17_Chr4g0028311 57.522 113 47 1 6 117 4 116 1.80e-37 134
Msa0955510 MtrunA17_Chr5g0400821 53.125 128 49 2 11 137 9 126 2.22e-37 134
Msa0955510 MtrunA17_Chr1g0194951 56.881 109 47 0 9 117 7 115 2.83e-37 135
Msa0955510 MtrunA17_Chr4g0060721 57.282 103 44 0 15 117 14 116 3.11e-37 134
Msa0955510 MtrunA17_Chr5g0417821 54.717 106 48 0 15 120 8 113 1.12e-36 131
Msa0955510 MtrunA17_Chr2g0327351 57.407 108 45 1 6 112 4 111 1.17e-36 132
Msa0955510 MtrunA17_Chr2g0327821 50.000 120 58 1 15 134 7 124 1.65e-36 129
Msa0955510 MtrunA17_Chr1g0194291 47.917 144 70 3 6 147 13 153 1.80e-36 130
Msa0955510 MtrunA17_Chr6g0487491 48.148 135 61 2 6 131 4 138 3.04e-36 129
Msa0955510 MtrunA17_Chr7g0264641 56.481 108 46 1 11 117 9 116 5.47e-36 129
Msa0955510 MtrunA17_Chr6g0453211 56.311 103 45 0 11 113 9 111 7.49e-36 130
Msa0955510 MtrunA17_Chr1g0209661 55.340 103 46 0 15 117 28 130 8.31e-36 130
Msa0955510 MtrunA17_Chr7g0228231 54.902 102 46 0 15 116 15 116 2.61e-35 125
Msa0955510 MtrunA17_Chr5g0434831 55.238 105 47 0 15 119 8 112 3.09e-35 125
Msa0955510 MtrunA17_Chr5g0434911 46.377 138 70 1 7 140 14 151 3.49e-35 127
Msa0955510 MtrunA17_Chr6g0450101 48.387 124 64 0 15 138 15 138 3.74e-35 125
Msa0955510 MtrunA17_Chr4g0054391 56.075 107 46 1 6 111 4 110 4.87e-35 127
Msa0955510 MtrunA17_Chr1g0180391 54.369 103 47 0 15 117 20 122 1.09e-34 124
Msa0955510 MtrunA17_Chr5g0434931 48.062 129 64 1 15 140 36 164 1.41e-34 125
Msa0955510 MtrunA17_Chr3g0099131 54.808 104 47 0 15 118 42 145 2.20e-34 130
Msa0955510 MtrunA17_Chr8g0354661 54.369 103 47 0 15 117 38 140 3.21e-33 127
Msa0955510 MtrunA17_Chr2g0322521 52.778 108 51 0 11 118 26 133 3.27e-33 124
Msa0955510 MtrunA17_Chr8g0360111 37.696 191 94 5 15 198 26 198 5.54e-33 121
Msa0955510 MtrunA17_Chr4g0068921 52.727 110 50 1 15 122 25 134 5.70e-33 119
Msa0955510 MtrunA17_Chr1g0154031 51.456 103 50 0 15 117 77 179 7.75e-33 124
Msa0955510 MtrunA17_Chr5g0434841 53.333 105 49 0 15 119 21 125 8.30e-33 122
Msa0955510 MtrunA17_Chr4g0072751 54.369 103 46 1 11 112 9 111 8.84e-33 122
Msa0955510 MtrunA17_Chr3g0080861 53.398 103 48 0 15 117 38 140 8.90e-33 125
Msa0955510 MtrunA17_Chr7g0220341 40.120 167 93 4 15 177 26 189 1.42e-32 120
Msa0955510 MtrunA17_Chr4g0030881 48.673 113 51 1 15 120 8 120 2.20e-32 119
Msa0955510 MtrunA17_Chr7g0269831 56.075 107 47 0 11 117 9 115 2.36e-32 121
Msa0955510 MtrunA17_Chr2g0293911 52.727 110 50 1 15 122 25 134 2.98e-32 120
Msa0955510 MtrunA17_Chr7g0240821 53.535 99 46 0 19 117 6 104 3.98e-32 118
Msa0955510 MtrunA17_Chr1g0192411 35.294 204 124 3 13 208 11 214 5.35e-32 121
Msa0955510 MtrunA17_Chr5g0441131 51.456 103 49 1 15 116 10 112 5.71e-32 116
Msa0955510 MtrunA17_Chr7g0228991 54.286 105 48 0 15 119 30 134 6.19e-32 119
Msa0955510 MtrunA17_Chr8g0342511 65.823 79 27 0 11 89 9 87 9.85e-32 113
Msa0955510 MtrunA17_Chr8g0342531 62.963 81 30 0 11 91 9 89 1.81e-31 114
Msa0955510 MtrunA17_Chr5g0440781 48.571 105 53 1 15 118 13 117 2.92e-29 109
Msa0955510 MtrunA17_Chr8g0342461 62.195 82 30 1 11 91 9 90 5.01e-29 107
Msa0955510 MtrunA17_Chr8g0334881 51.456 103 49 1 15 116 11 113 7.36e-29 111
Msa0955510 MtrunA17_Chr8g0342471 62.195 82 30 1 11 91 9 90 9.58e-29 106
Msa0955510 MtrunA17_Chr5g0440761 48.571 105 53 1 15 118 13 117 1.16e-28 110
Msa0955510 MtrunA17_Chr7g0247131 52.083 96 40 1 46 135 10 105 1.19e-28 110
Msa0955510 MtrunA17_Chr5g0441141 48.571 105 53 1 15 118 13 117 1.46e-28 110
Msa0955510 MtrunA17_Chr4g0042611 57.500 80 34 0 11 90 9 88 1.67e-28 104
Msa0955510 MtrunA17_Chr4g0013361 45.082 122 66 1 15 135 11 132 1.10e-27 108
Msa0955510 MtrunA17_Chr5g0401731 50.000 102 50 1 16 117 15 115 1.27e-27 108
Msa0955510 MtrunA17_Chr6g0454921 48.039 102 52 1 16 117 15 115 1.44e-26 103
Msa0955510 MtrunA17_Chr4g0008551 47.115 104 54 1 16 119 38 140 3.87e-26 105
Msa0955510 MtrunA17_Chr4g0053431 48.039 102 52 1 16 117 5 105 4.07e-26 103
Msa0955510 MtrunA17_Chr5g0395221 58.750 80 33 0 11 90 9 88 2.14e-25 96.3
Msa0955510 MtrunA17_Chr6g0480581 43.137 102 55 2 16 116 4 103 3.53e-25 100
Msa0955510 MtrunA17_Chr5g0417621 43.396 106 59 1 12 117 130 234 4.59e-25 103
Msa0955510 MtrunA17_Chr7g0238631 46.847 111 58 1 7 117 104 213 6.15e-25 103
Msa0955510 MtrunA17_Chr6g0460661 39.007 141 79 4 12 150 12 147 6.90e-25 97.4
Msa0955510 MtrunA17_Chr4g0042501 44.118 102 56 1 16 117 105 205 8.15e-25 102
Msa0955510 MtrunA17_Chr2g0294811 54.118 85 39 0 6 90 4 88 1.32e-24 95.1
Msa0955510 MtrunA17_Chr3g0133601 46.154 104 51 2 16 117 37 137 1.54e-24 98.2
Msa0955510 MtrunA17_Chr7g0229101 39.496 119 68 1 46 160 4 122 5.54e-24 96.3
Msa0955510 MtrunA17_Chr3g0099141 50.588 85 42 0 11 95 37 121 6.36e-24 94.0
Msa0955510 MtrunA17_Chr3g0125801 43.269 104 56 2 16 118 16 117 3.76e-23 95.9
Msa0955510 MtrunA17_Chr2g0323321 52.500 80 38 0 15 94 12 91 6.71e-23 90.5
Msa0955510 MtrunA17_Chr6g0460671 33.974 156 89 4 16 171 99 240 5.97e-22 93.6
Msa0955510 MtrunA17_Chr5g0434901 57.353 68 29 0 48 115 7 74 6.26e-22 88.2
Msa0955510 MtrunA17_Chr5g0429661 32.544 169 107 3 16 182 122 285 6.62e-22 93.6
Msa0955510 MtrunA17_Chr7g0254261 42.718 103 56 2 16 117 89 189 1.17e-21 92.8
Msa0955510 MtrunA17_Chr7g0229131 52.703 74 35 0 46 119 4 77 1.56e-21 88.6
Msa0955510 MtrunA17_Chr3g0139671 40.541 111 65 1 7 117 76 185 3.99e-21 92.8
Msa0955510 MtrunA17_Chr3g0139671 34.906 106 67 2 10 114 27 131 2.88e-12 66.6
Msa0955510 MtrunA17_Chr1g0157731 41.441 111 64 1 7 117 82 191 4.20e-21 92.8
Msa0955510 MtrunA17_Chr1g0157731 34.906 106 67 2 10 114 33 137 1.29e-12 67.8
Msa0955510 MtrunA17_Chr4g0058991 40.952 105 61 1 16 120 209 312 4.80e-21 92.0
Msa0955510 MtrunA17_Chr7g0238651 32.370 173 106 5 19 185 10 177 8.40e-21 90.5
Msa0955510 MtrunA17_Chr3g0117511 39.655 116 68 2 6 120 172 286 1.14e-20 90.9
Msa0955510 MtrunA17_Chr5g0425591 46.429 84 44 1 15 97 10 93 1.90e-20 83.6
Msa0955510 MtrunA17_Chr5g0437321 43.434 99 55 1 16 114 19 116 3.94e-20 87.4
Msa0955510 MtrunA17_Chr3g0093811 52.778 72 34 0 46 117 14 85 3.16e-19 84.7
Msa0955510 MtrunA17_Chr5g0397841 40.367 109 64 1 3 111 97 204 1.26e-18 85.1
Msa0955510 MtrunA17_Chr7g0228531 32.353 204 114 7 16 210 220 408 1.54e-18 84.7
Msa0955510 MtrunA17_Chr6g0453751 45.652 92 41 2 15 97 21 112 4.84e-17 75.5
Msa0955510 MtrunA17_Chr7g0228401 35.374 147 86 4 27 168 290 432 1.61e-16 79.0
Msa0955510 MtrunA17_Chr1g0177901 45.977 87 43 2 26 112 7 89 3.19e-16 75.5
Msa0955510 MtrunA17_Chr5g0416341 36.364 99 62 1 19 117 29 126 5.85e-15 74.3
Msa0955510 MtrunA17_Chr8g0362231 36.697 109 67 2 19 127 25 131 2.13e-14 72.4
Msa0955510 MtrunA17_Chr7g0228481 29.665 209 125 6 16 215 220 415 3.37e-14 72.0
Msa0955510 MtrunA17_Chr5g0434871 59.091 44 18 0 76 119 2 45 2.13e-13 63.9
Msa0955510 MtrunA17_Chr7g0233061 39.683 63 38 0 50 112 211 273 2.46e-12 66.2
Msa0955510 MtrunA17_Chr1g0193901 45.455 88 46 2 13 98 10 97 6.65e-12 61.2
Msa0955510 MtrunA17_Chr1g0193891 45.455 88 46 2 13 98 10 97 6.65e-12 61.2
Msa0955510 MtrunA17_Chr1g0193871 45.455 88 46 2 13 98 10 97 6.65e-12 61.2
Msa0955510 MtrunA17_Chr1g0193881 45.455 88 46 2 13 98 10 97 6.65e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0955510 AT4G25560.1 52.308 195 62 6 13 185 9 194 3.74e-61 195
Msa0955510 AT5G52260.1 53.158 190 71 2 10 185 8 193 2.52e-60 192
Msa0955510 AT3G48920.1 44.223 251 107 8 11 253 15 240 1.02e-57 185
Msa0955510 AT4G01680.3 73.832 107 28 0 11 117 9 115 1.01e-51 169
Msa0955510 AT5G26660.1 72.897 107 29 0 11 117 9 115 1.60e-51 172
Msa0955510 AT1G57560.1 70.000 110 33 0 11 120 9 118 3.54e-51 170
Msa0955510 AT1G57560.2 70.000 110 33 0 11 120 9 118 4.85e-51 169
Msa0955510 AT4G01680.1 73.832 107 28 0 11 117 9 115 5.83e-51 170
Msa0955510 AT1G09540.1 71.028 107 31 0 11 117 9 115 3.41e-49 166
Msa0955510 AT5G12870.1 65.179 112 39 0 13 124 17 128 1.23e-47 160
Msa0955510 AT3G13890.2 66.355 107 36 0 11 117 9 115 1.50e-47 162
Msa0955510 AT4G01680.2 66.387 119 28 1 11 117 9 127 1.65e-47 161
Msa0955510 AT1G63910.1 65.421 107 37 0 11 117 9 115 1.76e-47 162
Msa0955510 AT3G12720.1 65.421 107 37 0 11 117 19 125 5.56e-47 159
Msa0955510 AT5G65230.1 64.545 110 39 0 11 120 9 118 1.28e-46 158
Msa0955510 AT5G10280.1 63.303 109 40 0 12 120 10 118 1.40e-46 159
Msa0955510 AT1G79180.1 56.923 130 56 0 1 130 1 130 6.58e-46 156
Msa0955510 AT3G23250.1 46.386 166 84 2 11 176 9 169 2.17e-45 154
Msa0955510 AT3G08500.1 66.355 107 36 0 11 117 27 133 2.57e-45 155
Msa0955510 AT5G16770.4 42.194 237 105 7 15 225 13 243 1.02e-44 154
Msa0955510 AT5G16770.3 42.194 237 105 7 15 225 13 243 1.02e-44 154
Msa0955510 AT3G13890.1 61.207 116 36 1 11 117 9 124 1.61e-44 154
Msa0955510 AT5G16770.1 42.194 237 105 7 15 225 13 243 2.60e-44 153
Msa0955510 AT5G16770.2 42.194 237 105 7 15 225 13 243 2.60e-44 153
Msa0955510 AT3G12820.1 58.333 120 50 0 1 120 1 120 3.00e-44 150
Msa0955510 AT4G34990.1 52.518 139 56 1 16 144 14 152 4.64e-44 150
Msa0955510 AT1G06180.1 57.812 128 52 1 11 136 9 136 4.91e-44 149
Msa0955510 AT3G02940.2 60.000 110 44 0 11 120 9 118 7.51e-44 151
Msa0955510 AT3G02940.1 60.000 110 44 0 11 120 9 118 1.17e-43 150
Msa0955510 AT3G02940.3 60.000 110 44 0 11 120 9 118 1.17e-43 150
Msa0955510 AT4G12350.1 61.321 106 41 0 15 120 13 118 1.39e-43 149
Msa0955510 AT1G22640.1 61.682 107 41 0 11 117 9 115 1.81e-43 148
Msa0955510 AT4G05100.1 60.000 110 44 0 11 120 10 119 2.71e-43 150
Msa0955510 AT4G21440.1 60.000 110 44 0 11 120 9 118 2.98e-43 150
Msa0955510 AT5G16600.1 61.682 107 41 0 11 117 9 115 3.07e-43 150
Msa0955510 AT3G01140.2 60.909 110 43 0 11 120 9 118 3.99e-43 150
Msa0955510 AT1G16490.1 55.906 127 55 1 1 127 1 126 4.39e-43 148
Msa0955510 AT3G01140.1 60.909 110 43 0 11 120 52 161 7.93e-43 150
Msa0955510 AT1G56160.1 59.829 117 47 0 1 117 1 117 8.61e-43 148
Msa0955510 AT4G22680.1 62.264 106 40 0 15 120 13 118 1.40e-42 146
Msa0955510 AT4G38620.1 49.296 142 71 1 11 151 9 150 1.69e-42 147
Msa0955510 AT4G09460.1 60.748 107 42 0 11 117 9 115 2.35e-42 145
Msa0955510 AT5G54230.1 61.321 106 41 0 15 120 13 118 4.16e-42 147
Msa0955510 AT1G34670.1 63.208 106 39 0 15 120 13 118 4.33e-42 148
Msa0955510 AT5G15310.4 62.264 106 40 0 15 120 13 118 4.58e-42 144
Msa0955510 AT1G18570.1 59.434 106 43 0 15 120 14 119 6.86e-42 147
Msa0955510 AT5G15310.1 62.264 106 40 0 15 120 13 118 7.17e-42 146
Msa0955510 AT1G66230.1 52.672 131 60 1 11 139 9 139 8.29e-42 145
Msa0955510 AT5G15310.2 62.264 106 40 0 15 120 13 118 8.32e-42 145
Msa0955510 AT4G28110.1 57.658 111 47 0 11 121 9 119 8.83e-42 145
Msa0955510 AT2G16720.1 61.765 102 39 0 16 117 14 115 9.43e-42 144
Msa0955510 AT2G31180.1 58.929 112 46 0 6 117 4 115 1.33e-41 143
Msa0955510 AT5G35550.1 54.545 121 55 0 1 121 1 121 2.81e-41 143
Msa0955510 AT3G24310.1 61.538 104 40 0 14 117 18 121 6.65e-41 142
Msa0955510 AT3G61250.1 44.910 167 82 3 15 181 13 169 7.45e-41 143
Msa0955510 AT4G17785.2 61.165 103 40 0 15 117 14 116 9.94e-41 144
Msa0955510 AT4G17785.1 61.165 103 40 0 15 117 14 116 1.31e-40 144
Msa0955510 AT1G74430.1 58.491 106 44 0 15 120 13 118 2.01e-40 141
Msa0955510 AT3G30210.1 42.778 180 91 3 15 188 28 201 2.46e-40 141
Msa0955510 AT4G13480.1 54.701 117 53 0 14 130 6 122 2.87e-40 140
Msa0955510 AT1G35515.1 44.848 165 83 3 11 174 9 166 3.31e-40 139
Msa0955510 AT5G60890.1 60.194 103 41 0 15 117 13 115 5.16e-40 140
Msa0955510 AT5G56110.1 59.813 107 43 0 11 117 9 115 5.32e-40 141
Msa0955510 AT5G14750.1 55.660 106 47 0 12 117 14 119 5.87e-40 138
Msa0955510 AT5G52600.1 56.075 107 47 0 11 117 9 115 1.38e-39 137
Msa0955510 AT3G47600.1 53.782 119 55 0 11 129 9 127 1.51e-39 140
Msa0955510 AT5G61420.2 43.850 187 87 3 15 199 13 183 2.33e-39 140
Msa0955510 AT1G74080.1 58.491 106 44 0 15 120 13 118 2.40e-39 140
Msa0955510 AT1G79180.2 38.835 206 85 2 1 173 1 198 2.89e-39 139
Msa0955510 AT3G27920.1 44.578 166 73 3 13 162 13 175 2.91e-39 137
Msa0955510 AT1G08810.1 59.259 108 44 0 15 122 13 120 5.24e-39 137
Msa0955510 AT5G40330.1 55.238 105 47 0 13 117 11 115 5.49e-39 135
Msa0955510 AT3G62610.1 58.879 107 44 0 11 117 9 115 8.09e-39 139
Msa0955510 AT3G13540.1 54.545 110 50 0 11 120 20 129 1.09e-38 136
Msa0955510 AT5G14340.1 57.944 107 45 0 11 117 21 127 1.22e-38 136
Msa0955510 AT5G07700.1 45.122 164 77 3 15 167 13 174 1.64e-38 138
Msa0955510 AT5G07700.2 45.122 164 77 3 15 167 13 174 1.64e-38 138
Msa0955510 AT1G48000.1 48.077 156 72 4 15 168 33 181 1.85e-38 135
Msa0955510 AT3G28910.1 57.944 107 45 0 11 117 9 115 3.67e-38 136
Msa0955510 AT5G62470.2 57.009 107 46 0 11 117 9 115 4.17e-38 137
Msa0955510 AT5G49330.1 56.250 112 49 0 6 117 4 115 6.18e-38 136
Msa0955510 AT5G40350.1 52.212 113 54 0 12 124 15 127 6.96e-38 132
Msa0955510 AT3G01530.1 49.180 122 61 1 6 126 17 138 8.22e-38 132
Msa0955510 AT5G07690.1 60.784 102 40 0 15 116 13 114 8.40e-38 136
Msa0955510 AT5G23000.1 57.407 108 45 1 11 117 9 116 8.48e-38 135
Msa0955510 AT5G57620.1 56.410 117 50 1 11 126 9 125 9.63e-38 135
Msa0955510 AT5G62320.1 42.953 149 78 1 15 156 14 162 1.38e-37 133
Msa0955510 AT3G27810.1 49.612 129 64 1 11 138 17 145 1.95e-37 132
Msa0955510 AT5G65790.1 51.908 131 52 2 11 140 9 129 2.16e-37 135
Msa0955510 AT3G49690.1 50.746 134 55 2 6 138 4 127 3.75e-37 134
Msa0955510 AT1G18710.1 54.369 103 47 0 15 117 13 115 6.55e-37 132
Msa0955510 AT2G47460.1 55.357 112 50 0 6 117 4 115 1.00e-36 134
Msa0955510 AT1G74650.1 55.963 109 48 0 11 119 9 117 1.18e-36 132
Msa0955510 AT2G47190.1 44.295 149 78 3 12 158 18 163 1.97e-36 130
Msa0955510 AT5G62470.1 57.009 107 45 1 11 117 9 114 2.78e-36 132
Msa0955510 AT5G59780.3 48.739 119 61 0 8 126 2 120 1.40e-35 127
Msa0955510 AT3G53200.1 55.769 104 46 0 15 118 10 113 1.53e-35 127
Msa0955510 AT2G26960.1 52.830 106 50 0 11 116 17 122 2.91e-35 131
Msa0955510 AT2G32460.1 50.407 123 54 1 15 137 19 134 3.26e-35 132
Msa0955510 AT2G32460.2 50.407 123 54 1 15 137 7 122 3.54e-35 131
Msa0955510 AT3G28470.1 54.902 102 46 0 11 112 9 110 5.56e-35 128
Msa0955510 AT2G26950.1 50.000 102 51 0 11 112 13 114 7.41e-35 129
Msa0955510 AT1G68320.1 44.898 147 70 2 15 155 20 161 7.97e-35 127
Msa0955510 AT2G36890.1 53.571 112 51 1 11 121 9 120 8.69e-35 127
Msa0955510 AT2G36890.2 53.571 112 51 1 11 121 50 161 1.33e-34 127
Msa0955510 AT3G11440.2 52.778 108 51 0 11 118 38 145 1.35e-34 130
Msa0955510 AT5G06100.1 54.808 104 47 0 15 118 33 136 2.41e-34 129
Msa0955510 AT3G11440.3 52.778 108 51 0 11 118 38 145 3.43e-34 130
Msa0955510 AT3G11440.4 52.778 108 51 0 11 118 38 145 3.43e-34 130
Msa0955510 AT3G11440.1 52.778 108 51 0 11 118 38 145 3.43e-34 130
Msa0955510 AT1G66370.1 54.369 103 47 0 15 117 9 111 3.51e-34 124
Msa0955510 AT5G06100.5 54.808 104 47 0 15 118 33 136 7.19e-34 129
Msa0955510 AT5G06100.2 54.808 104 47 0 15 118 33 136 7.19e-34 129
Msa0955510 AT5G06100.3 54.808 104 47 0 15 118 33 136 7.19e-34 129
Msa0955510 AT5G06100.4 54.808 104 47 0 15 118 33 136 7.19e-34 129
Msa0955510 AT3G46130.1 52.427 103 49 0 15 117 10 112 1.05e-33 123
Msa0955510 AT5G55020.1 54.902 102 46 0 15 116 27 128 2.30e-33 127
Msa0955510 AT4G37780.1 54.630 108 48 1 11 117 9 116 2.40e-33 123
Msa0955510 AT5G49620.1 44.586 157 73 4 15 160 27 180 4.79e-33 122
Msa0955510 AT3G06490.1 50.000 122 59 1 15 134 20 141 4.94e-33 123
Msa0955510 AT4G26930.1 52.941 102 48 0 15 116 20 121 6.00e-33 124
Msa0955510 AT1G56650.1 56.311 103 45 0 15 117 9 111 3.98e-32 119
Msa0955510 AT1G25340.1 51.456 103 50 0 15 117 19 121 3.99e-32 119
Msa0955510 AT1G66380.1 55.340 103 46 0 15 117 9 111 6.61e-32 115
Msa0955510 AT1G66390.1 56.311 103 45 0 15 117 9 111 1.66e-31 117
Msa0955510 AT5G26660.2 74.648 71 18 0 47 117 14 84 7.13e-31 117
Msa0955510 AT3G53200.2 62.821 78 29 0 41 118 3 80 1.06e-29 111
Msa0955510 AT3G12820.2 70.423 71 21 0 50 120 2 72 1.22e-29 110
Msa0955510 AT5G49620.2 40.936 171 73 5 15 160 27 194 2.91e-29 113
Msa0955510 AT3G60460.1 48.598 107 54 1 11 116 8 114 3.35e-29 112
Msa0955510 AT5G59780.2 56.627 83 36 0 44 126 17 99 4.28e-29 110
Msa0955510 AT3G46130.4 62.162 74 28 0 44 117 17 90 7.46e-29 110
Msa0955510 AT5G35550.2 65.333 75 26 0 47 121 50 124 1.52e-28 109
Msa0955510 AT3G46130.3 62.500 72 27 0 46 117 9 80 2.05e-28 108
Msa0955510 AT3G47600.2 50.962 104 47 1 26 129 22 121 3.12e-28 110
Msa0955510 AT1G25340.2 48.544 103 48 1 15 117 19 116 8.08e-28 108
Msa0955510 AT5G40350.2 57.692 78 33 0 47 124 5 82 1.14e-27 105
Msa0955510 AT1G25340.3 47.170 106 51 1 12 117 16 116 1.30e-27 108
Msa0955510 AT3G27810.2 53.763 93 42 1 47 138 4 96 1.40e-27 105
Msa0955510 AT5G02320.3 42.424 132 68 2 16 147 67 190 4.17e-27 109
Msa0955510 AT5G02320.1 42.424 132 68 2 16 147 127 250 4.61e-27 110
Msa0955510 AT5G02320.2 42.424 132 68 2 16 147 127 250 4.61e-27 110
Msa0955510 AT2G23290.1 50.980 102 49 1 16 117 13 113 1.84e-26 105
Msa0955510 AT5G14750.3 61.765 68 26 0 50 117 18 85 2.82e-26 101
Msa0955510 AT4G37260.1 50.000 102 50 1 16 117 13 113 6.39e-26 104
Msa0955510 AT1G69560.1 43.519 108 58 2 11 117 102 207 1.22e-25 103
Msa0955510 AT1G69560.2 43.519 108 58 2 11 117 118 223 1.56e-25 103
Msa0955510 AT3G09230.1 37.671 146 82 3 16 161 55 191 2.96e-25 103
Msa0955510 AT5G67300.1 47.059 102 53 1 16 117 6 106 3.63e-25 102
Msa0955510 AT1G17950.1 42.157 102 58 1 16 117 5 105 3.87e-25 100
Msa0955510 AT2G39880.1 50.450 111 51 3 11 120 46 153 1.07e-24 101
Msa0955510 AT3G50060.1 39.456 147 84 3 16 161 6 148 1.13e-24 100
Msa0955510 AT1G73410.1 43.137 102 57 1 16 117 6 106 1.42e-24 99.0
Msa0955510 AT1G26780.1 44.660 103 54 2 16 117 98 198 2.06e-24 99.4
Msa0955510 AT1G73410.2 43.137 102 57 1 16 117 6 106 2.34e-24 97.4
Msa0955510 AT1G26780.2 44.660 103 54 2 16 117 98 198 4.18e-24 100
Msa0955510 AT3G55730.1 49.020 102 51 1 16 117 56 156 8.31e-24 99.8
Msa0955510 AT3G09370.2 46.078 102 54 1 16 117 135 235 6.82e-23 97.8
Msa0955510 AT3G09370.1 46.078 102 54 1 16 117 130 230 7.31e-23 97.8
Msa0955510 AT3G09370.3 46.078 102 54 1 16 117 143 243 7.72e-23 97.8
Msa0955510 AT5G11050.1 31.532 222 127 6 5 219 94 297 1.69e-22 96.3
Msa0955510 AT3G23250.2 41.880 117 63 2 60 176 1 112 2.67e-22 92.4
Msa0955510 AT4G33450.1 33.333 141 91 3 11 150 14 152 4.89e-22 92.4
Msa0955510 AT5G17800.1 38.679 106 64 1 16 121 93 197 6.08e-22 93.6
Msa0955510 AT1G66380.3 58.333 72 30 0 46 117 7 78 1.48e-21 87.0
Msa0955510 AT5G40360.1 30.769 195 121 6 16 208 158 340 1.72e-21 92.8
Msa0955510 AT5G58850.1 33.953 215 107 9 16 218 105 296 1.79e-21 93.2
Msa0955510 AT4G32730.5 41.441 111 64 1 7 117 78 187 3.65e-21 93.2
Msa0955510 AT4G32730.5 33.333 114 74 2 2 114 21 133 9.59e-12 65.5
Msa0955510 AT4G32730.4 41.441 111 64 1 7 117 78 187 3.65e-21 93.2
Msa0955510 AT4G32730.4 33.333 114 74 2 2 114 21 133 9.59e-12 65.5
Msa0955510 AT4G32730.3 41.441 111 64 1 7 117 78 187 3.65e-21 93.2
Msa0955510 AT4G32730.3 33.333 114 74 2 2 114 21 133 9.59e-12 65.5
Msa0955510 AT4G32730.2 41.441 111 64 1 7 117 78 187 3.65e-21 93.2
Msa0955510 AT4G32730.2 33.333 114 74 2 2 114 21 133 9.59e-12 65.5
Msa0955510 AT4G32730.1 41.441 111 64 1 7 117 78 187 4.16e-21 93.2
Msa0955510 AT4G32730.1 33.333 114 74 2 2 114 21 133 9.36e-12 65.5
Msa0955510 AT3G27785.1 37.719 114 70 1 4 117 177 289 9.48e-21 91.3
Msa0955510 AT2G25230.1 38.983 118 71 1 11 128 21 137 1.02e-20 88.6
Msa0955510 AT4G18770.1 39.837 123 69 2 11 129 212 333 1.03e-20 91.3
Msa0955510 AT3G29020.1 34.167 120 78 1 16 135 65 183 1.10e-20 88.2
Msa0955510 AT1G71030.1 52.500 80 37 1 41 120 8 86 1.64e-20 87.0
Msa0955510 AT4G25560.2 40.876 137 50 6 71 185 1 128 2.23e-20 87.0
Msa0955510 AT5G11510.3 39.640 111 66 1 7 117 72 181 2.63e-20 90.9
Msa0955510 AT5G11510.1 39.640 111 66 1 7 117 72 181 2.63e-20 90.9
Msa0955510 AT5G11510.4 39.640 111 66 1 7 117 72 181 2.63e-20 90.9
Msa0955510 AT5G11510.2 39.640 111 66 1 7 117 72 181 2.96e-20 90.5
Msa0955510 AT1G71030.2 57.353 68 29 0 53 120 5 72 3.04e-20 85.9
Msa0955510 AT5G11510.5 39.640 111 66 1 7 117 72 181 3.10e-20 90.5
Msa0955510 AT3G29020.2 34.167 120 78 1 16 135 67 185 5.91e-20 87.8
Msa0955510 AT1G22640.3 62.069 58 22 0 60 117 1 58 1.04e-19 85.1
Msa0955510 AT5G14750.4 56.897 58 25 0 60 117 1 58 6.90e-19 81.3
Msa0955510 AT5G14750.2 56.897 58 25 0 60 117 1 58 6.90e-19 81.3
Msa0955510 AT1G66380.2 51.948 77 37 0 15 91 9 85 1.85e-18 79.0
Msa0955510 AT5G39700.1 37.736 106 65 1 11 116 51 155 1.21e-17 79.0
Msa0955510 AT2G37630.1 36.111 108 67 1 19 124 7 114 1.49e-17 81.6
Msa0955510 AT1G18960.1 37.736 106 63 2 12 117 6 108 3.05e-17 80.1
Msa0955510 AT5G40430.1 35.593 118 74 2 11 128 49 164 8.12e-17 78.2
Msa0955510 AT4G00540.2 38.938 113 65 2 8 117 95 206 2.12e-16 78.6
Msa0955510 AT4G00540.2 30.000 120 76 3 10 121 40 159 5.26e-11 62.8
Msa0955510 AT4G00540.1 38.938 113 65 2 8 117 93 204 2.79e-16 78.6
Msa0955510 AT4G00540.1 30.000 120 76 3 10 121 38 157 6.22e-11 62.8
Msa0955510 AT2G02820.3 37.374 99 61 1 19 117 33 130 2.89e-16 77.8
Msa0955510 AT2G02820.1 37.374 99 61 1 19 117 33 130 5.36e-16 77.8
Msa0955510 AT2G02820.2 37.374 99 61 1 19 117 33 130 6.53e-16 77.4
Msa0955510 AT1G14350.2 36.364 99 62 1 19 117 28 125 3.32e-14 72.4
Msa0955510 AT1G14350.1 36.364 99 62 1 19 117 28 125 3.32e-14 72.4
Msa0955510 AT5G59780.1 54.348 46 21 0 72 117 1 46 4.45e-12 63.5
Msa0955510 AT3G46130.2 54.348 46 21 0 72 117 1 46 7.35e-12 63.2

Find 38 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAACTCACCAGCTTTAA+TGG 0.227212 6_3:+59985589 None:intergenic
ATCTCGTTGTCGGTCCTTCC+TGG 0.281267 6_3:+59983141 None:intergenic
CTGAGCTTGTCATCTTCTTC+AGG 0.325531 6_3:+59985656 None:intergenic
TCTTCACCAAACTGCCCTTC+TGG 0.337772 6_3:+59982775 None:intergenic
CAAAATACAGAAAGGGATTA+TGG 0.347936 6_3:-59985682 Msa0955510:CDS
AGAAACTCACCAGCTTTAAT+GGG 0.371716 6_3:+59985590 None:intergenic
TTCCATCATTGTTCAGATAG+TGG 0.397440 6_3:+59982662 None:intergenic
CAAATGCCAGAAGGGCAGTT+TGG 0.406471 6_3:-59982781 Msa0955510:CDS
ATGACCCTTCACCACATGTT+AGG 0.420965 6_3:-59984492 Msa0955510:CDS
TGAGCTTTGACAAACTTCAT+TGG 0.472178 6_3:+59982936 None:intergenic
TGAAGCATGGTCATAGCTGC+TGG 0.480012 6_3:-59985622 Msa0955510:CDS
ACCAAAATCAAAATACAGAA+AGG 0.483708 6_3:-59985690 Msa0955510:CDS
AGCATACCTCTCTTTAATCC+TGG 0.484900 6_3:+59984540 None:intergenic
CTCTCTTTAATCCTGGTCTC+AGG 0.486497 6_3:+59984547 None:intergenic
CACTCAGAAAATAAAAGTCT+TGG 0.488305 6_3:+59982910 None:intergenic
ATCCACTATCTGAACAATGA+TGG 0.503889 6_3:-59982664 Msa0955510:CDS
CCAAAATCAAAATACAGAAA+GGG 0.532254 6_3:-59985689 Msa0955510:CDS
ATGGAAAGAGTTGCAGACTA+AGG 0.533879 6_3:-59984581 Msa0955510:CDS
TGTTTCCTAACATGTGGTGA+AGG 0.540826 6_3:+59984487 None:intergenic
AACATTATTCAAATGCCAGA+AGG 0.548828 6_3:-59982790 Msa0955510:CDS
TACTGAGGTGTACTACTCAC+TGG 0.549488 6_3:-59982722 Msa0955510:CDS
CAGATTGCACAACAATTGCC+AGG 0.552351 6_3:-59983159 Msa0955510:CDS
TATCCAGGCTTGCAAAGGAA+TGG 0.556318 6_3:-59984600 Msa0955510:intron
CTTACTTGTTTCCTAACATG+TGG 0.564902 6_3:+59984481 None:intergenic
AGCGCTGTCCCCATTAAAGC+TGG 0.570808 6_3:-59985599 Msa0955510:intron
TTGAATATCCAGGCTTGCAA+AGG 0.574607 6_3:-59984605 Msa0955510:intron
GTTTCCTAACATGTGGTGAA+GGG 0.575079 6_3:+59984488 None:intergenic
TTGCACAACAATTGCCAGGA+AGG 0.583614 6_3:-59983155 Msa0955510:CDS
GAAAGAGTTGCAGACTAAGG+TGG 0.587797 6_3:-59984578 Msa0955510:CDS
ACATTATTCAAATGCCAGAA+GGG 0.608741 6_3:-59982789 Msa0955510:CDS
GGATCAGTTATCAAATCAAG+TGG 0.610564 6_3:-59982701 Msa0955510:CDS
AGTGATTATATAATGAAGCA+TGG 0.618334 6_3:-59985635 Msa0955510:CDS
TGGATTAACTACCTGAGACC+AGG 0.627368 6_3:-59984558 Msa0955510:CDS
AATTCAAAATCTAGATACTG+AGG 0.628820 6_3:-59982737 Msa0955510:CDS
AGGTATGCTCAGCAAACATG+AGG 0.642467 6_3:-59984526 Msa0955510:CDS
CTGAGACCAGGATTAAAGAG+AGG 0.661053 6_3:-59984546 Msa0955510:CDS
GAAACTCACCAGCTTTAATG+GGG 0.663208 6_3:+59985591 None:intergenic
TCACTAGATCAAGTAAACTG+TGG 0.709539 6_3:-59982883 Msa0955510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTAAAAATTAATAAA+AGG - chr6_3:59984360-59984379 Msa0955510:intron 0.0%
!! TTTACATTAAATAATGTAAT+TGG - chr6_3:59984288-59984307 Msa0955510:intron 10.0%
!!! AGTCATTTTATTTTATTTTT+TGG + chr6_3:59984970-59984989 None:intergenic 10.0%
!! TATATAATAGTAGAAAAATA+TGG - chr6_3:59985092-59985111 Msa0955510:intron 10.0%
!!! TTTTTAGGTATTATCAAATA+TGG + chr6_3:59983550-59983569 None:intergenic 15.0%
!!! TCTCTTATAAACATATTTTT+AGG + chr6_3:59983565-59983584 None:intergenic 15.0%
!! TAGAATAACAAAATAGTATT+AGG + chr6_3:59983705-59983724 None:intergenic 15.0%
!! ATAATATATATATATGGAGT+AGG - chr6_3:59983937-59983956 Msa0955510:intron 15.0%
!!! AAGTTAGGTTTTTTTTTATA+AGG + chr6_3:59984040-59984059 None:intergenic 15.0%
!!! ATTTTCAAAAAGTAAAAGTT+AGG + chr6_3:59984055-59984074 None:intergenic 15.0%
!! AATAAAAGGAAAAAATTGAT+AGG - chr6_3:59984374-59984393 Msa0955510:intron 15.0%
!!! TGATTTGATTTAAGAAATTA+AGG + chr6_3:59984471-59984490 None:intergenic 15.0%
!! GTCTTAAAAAATTATGATTA+TGG + chr6_3:59984598-59984617 None:intergenic 15.0%
!! TATTACATCATATAAACTTT+GGG + chr6_3:59984642-59984661 None:intergenic 15.0%
!! ATATTACATCATATAAACTT+TGG + chr6_3:59984643-59984662 None:intergenic 15.0%
!! TAATCCCTTATCAATTATAT+TGG - chr6_3:59982821-59982840 Msa0955510:CDS 20.0%
!! AAAAAAGAGGAAAAATACTT+GGG + chr6_3:59983076-59983095 None:intergenic 20.0%
!! TAAAAAAGAGGAAAAATACT+TGG + chr6_3:59983077-59983096 None:intergenic 20.0%
!! TTAAAATACGTGTAAAAAAG+AGG + chr6_3:59983089-59983108 None:intergenic 20.0%
!!! TCTTTTTTACACGTATTTTA+AGG - chr6_3:59983088-59983107 Msa0955510:CDS 20.0%
!!! TATTTTTAGTTTTTATGCTG+AGG + chr6_3:59983166-59983185 None:intergenic 20.0%
!! TACAATCTCAAAATTTGTAT+TGG + chr6_3:59983600-59983619 None:intergenic 20.0%
!! TAGTTTGAAAATGTGTTTAT+AGG + chr6_3:59983638-59983657 None:intergenic 20.0%
!! TATTCAATGTATATTCACAT+TGG + chr6_3:59983749-59983768 None:intergenic 20.0%
!! TTATTCAAAAAGTAAAAGTG+AGG + chr6_3:59983921-59983940 None:intergenic 20.0%
!! ACAATTTAATATTTAACCCA+AGG - chr6_3:59984191-59984210 Msa0955510:intron 20.0%
!! CAATTTAATATTTAACCCAA+GGG - chr6_3:59984192-59984211 Msa0955510:intron 20.0%
!! AATTTAATATTTAACCCAAG+GGG - chr6_3:59984193-59984212 Msa0955510:intron 20.0%
!! CTTCTCTTATTAATTTAAGT+AGG + chr6_3:59984331-59984350 None:intergenic 20.0%
!! GTACATTATGTTAACAAAAT+GGG + chr6_3:59984422-59984441 None:intergenic 20.0%
!! TGTACATTATGTTAACAAAA+TGG + chr6_3:59984423-59984442 None:intergenic 20.0%
!! AAATTAATCATTGTATGTGA+TGG + chr6_3:59984527-59984546 None:intergenic 20.0%
!! ATTACATCATATAAACTTTG+GGG + chr6_3:59984641-59984660 None:intergenic 20.0%
!!! GAATTCATCTTTGTTTTAAA+TGG - chr6_3:59984663-59984682 Msa0955510:intron 20.0%
!! ACTTAATAACATAAAATCAC+AGG - chr6_3:59984775-59984794 Msa0955510:intron 20.0%
!! TAAAACAAACTAGATCATTT+GGG + chr6_3:59985022-59985041 None:intergenic 20.0%
!! TTAAAACAAACTAGATCATT+TGG + chr6_3:59985023-59985042 None:intergenic 20.0%
!!! ATAATTTTTAATCTCGTTGT+CGG + chr6_3:59985239-59985258 None:intergenic 20.0%
!! ACAACGAGATTAAAAATTAT+TGG - chr6_3:59985239-59985258 Msa0955510:intron 20.0%
!!! TTTTCTAACAACACATATTT+AGG + chr6_3:59985349-59985368 None:intergenic 20.0%
!!! TCTAAATTCAGATGATTTTT+TGG - chr6_3:59985513-59985532 Msa0955510:intron 20.0%
! ACCAAAATCAAAATACAGAA+AGG - chr6_3:59982677-59982696 Msa0955510:CDS 25.0%
! CCAAAATCAAAATACAGAAA+GGG - chr6_3:59982678-59982697 Msa0955510:CDS 25.0%
! AGTGATTATATAATGAAGCA+TGG - chr6_3:59982732-59982751 Msa0955510:CDS 25.0%
! GCTACCAATATAATTGATAA+GGG + chr6_3:59982828-59982847 None:intergenic 25.0%
! TGCTACCAATATAATTGATA+AGG + chr6_3:59982829-59982848 None:intergenic 25.0%
!! TTTGAGGTCAAATAAATTCT+AGG + chr6_3:59982935-59982954 None:intergenic 25.0%
! TGTTTGAAGACTTAAATTTG+AGG + chr6_3:59982951-59982970 None:intergenic 25.0%
! AAGTCTTCAAACATAAATGT+AGG - chr6_3:59982958-59982977 Msa0955510:CDS 25.0%
!! ATATTGGTAACATTAGTGTA+AGG + chr6_3:59983035-59983054 None:intergenic 25.0%
!!! ATATTGAGTTTTGGTGATAT+TGG + chr6_3:59983051-59983070 None:intergenic 25.0%
!!! AGGTTGTTTTGTAAAAATCA+AGG - chr6_3:59983108-59983127 Msa0955510:CDS 25.0%
! GTAAAAATCAAGGAATGATA+AGG - chr6_3:59983118-59983137 Msa0955510:CDS 25.0%
!! CATGGATAACAAATGATTTT+GGG + chr6_3:59983276-59983295 None:intergenic 25.0%
!! ACATGGATAACAAATGATTT+TGG + chr6_3:59983277-59983296 None:intergenic 25.0%
!!! AAAATCATTTGTTATCCATG+TGG - chr6_3:59983276-59983295 Msa0955510:intron 25.0%
! TTGAAAATGTGTTTATAGGT+GGG + chr6_3:59983634-59983653 None:intergenic 25.0%
! TTTGAAAATGTGTTTATAGG+TGG + chr6_3:59983635-59983654 None:intergenic 25.0%
! TGAATATACATTGAATATCC+AGG - chr6_3:59983752-59983771 Msa0955510:intron 25.0%
! ATATATATATATGGAGTAGG+CGG - chr6_3:59983940-59983959 Msa0955510:intron 25.0%
!!! TTTTTTATAAGGCAAGAAGT+AGG + chr6_3:59984029-59984048 None:intergenic 25.0%
! TAATTTAAGTAGGAATTAGC+TGG + chr6_3:59984321-59984340 None:intergenic 25.0%
! ATGTACAAAGAAAAGACATA+TGG - chr6_3:59984436-59984455 Msa0955510:intron 25.0%
! TATAGTGTATTTGTGTGTAT+AGG + chr6_3:59984718-59984737 None:intergenic 25.0%
! TATACACACAAATACACTAT+AGG - chr6_3:59984717-59984736 Msa0955510:intron 25.0%
! CAAATACACTATAGGAAAAA+AGG - chr6_3:59984725-59984744 Msa0955510:intron 25.0%
! TGACTTTCTATTCCAAATTT+GGG + chr6_3:59984807-59984826 None:intergenic 25.0%
! TTGACTTTCTATTCCAAATT+TGG + chr6_3:59984808-59984827 None:intergenic 25.0%
!!! AGTTGAAAATGTGCTATTTT+TGG - chr6_3:59984855-59984874 Msa0955510:intron 25.0%
!!! GTTGAAAATGTGCTATTTTT+GGG - chr6_3:59984856-59984875 Msa0955510:intron 25.0%
!!! TTGAAAATGTGCTATTTTTG+GGG - chr6_3:59984857-59984876 Msa0955510:intron 25.0%
!!! CAAAACAACTTAACTTGTAT+TGG - chr6_3:59985174-59985193 Msa0955510:intron 25.0%
!!! GATTTTTTGGTCTTGAAAAA+TGG - chr6_3:59985526-59985545 Msa0955510:intron 25.0%
! AATTCAAAATCTAGATACTG+AGG - chr6_3:59985630-59985649 Msa0955510:CDS 25.0%
!!! CCCTTTCTGTATTTTGATTT+TGG + chr6_3:59982681-59982700 None:intergenic 30.0%
CAAAATACAGAAAGGGATTA+TGG - chr6_3:59982685-59982704 Msa0955510:CDS 30.0%
TACAACAATCTCAAATTCAC+CGG + chr6_3:59983000-59983019 None:intergenic 30.0%
AAAATCAAGGAATGATAAGG+AGG - chr6_3:59983121-59983140 Msa0955510:CDS 30.0%
!!! TTTAGTTTTTATGCTGAGGA+TGG + chr6_3:59983162-59983181 None:intergenic 30.0%
AACTCTTAGTAGCATCAAAA+GGG + chr6_3:59983527-59983546 None:intergenic 30.0%
AACTAATCTCATCCAATGTT+TGG - chr6_3:59983653-59983672 Msa0955510:intron 30.0%
! TGGAAGTACACAAAATTTGA+TGG - chr6_3:59984683-59984702 Msa0955510:intron 30.0%
!!! ATGTTTTTGAGTTGAGAGTA+AGG + chr6_3:59985314-59985333 None:intergenic 30.0%
CACTCAGAAAATAAAAGTCT+TGG + chr6_3:59985460-59985479 None:intergenic 30.0%
!!! CAAGACTTTTATTTTCTGAG+TGG - chr6_3:59985458-59985477 Msa0955510:intron 30.0%
AACATTATTCAAATGCCAGA+AGG - chr6_3:59985577-59985596 Msa0955510:intron 30.0%
ACATTATTCAAATGCCAGAA+GGG - chr6_3:59985578-59985597 Msa0955510:intron 30.0%
! AGAAACTCACCAGCTTTAAT+GGG + chr6_3:59982780-59982799 None:intergenic 35.0%
! AAGAAACTCACCAGCTTTAA+TGG + chr6_3:59982781-59982800 None:intergenic 35.0%
! ACTTGGGTGATATTGAGTTT+TGG + chr6_3:59983060-59983079 None:intergenic 35.0%
TTTGATGCTACTAAGAGTTG+AGG - chr6_3:59983331-59983350 Msa0955510:intron 35.0%
TTGATGCTACTAAGAGTTGA+GGG - chr6_3:59983332-59983351 Msa0955510:intron 35.0%
GAACTCTTAGTAGCATCAAA+AGG + chr6_3:59983528-59983547 None:intergenic 35.0%
CATGTTAAGAGTCCAAACAT+TGG + chr6_3:59983668-59983687 None:intergenic 35.0%
ATGTTTGGACTCTTAACATG+AGG - chr6_3:59983668-59983687 Msa0955510:intron 35.0%
CTTACTTGTTTCCTAACATG+TGG + chr6_3:59983889-59983908 None:intergenic 35.0%
CACATGTTAGGAAACAAGTA+AGG - chr6_3:59983887-59983906 Msa0955510:intron 35.0%
! CAACCTAATTGGGATTTTTC+CGG - chr6_3:59983990-59984009 Msa0955510:intron 35.0%
GTCTCGTTTAATTGTTTCGA+TGG - chr6_3:59984264-59984283 Msa0955510:intron 35.0%
AAAATGGGAATGCTAAGTCA+TGG + chr6_3:59984407-59984426 None:intergenic 35.0%
GGACGGAGGAAATATTAAAT+AGG + chr6_3:59985001-59985020 None:intergenic 35.0%
ACAAACTAGATCATTTGGGA+CGG + chr6_3:59985018-59985037 None:intergenic 35.0%
!! CAACTTAACTTGTATTGGTC+AGG - chr6_3:59985179-59985198 Msa0955510:intron 35.0%
! TGAGCTTTGACAAACTTCAT+TGG + chr6_3:59985434-59985453 None:intergenic 35.0%
TCACTAGATCAAGTAAACTG+TGG - chr6_3:59985484-59985503 Msa0955510:intron 35.0%
GGATCAGTTATCAAATCAAG+TGG - chr6_3:59985666-59985685 Msa0955510:CDS 35.0%
ATCCACTATCTGAACAATGA+TGG - chr6_3:59985703-59985722 Msa0955510:CDS 35.0%
TTCCATCATTGTTCAGATAG+TGG + chr6_3:59985708-59985727 None:intergenic 35.0%
! GAAACTCACCAGCTTTAATG+GGG + chr6_3:59982779-59982798 None:intergenic 40.0%
AAATGTAGGCATACTTCCCT+TGG - chr6_3:59982972-59982991 Msa0955510:CDS 40.0%
ATCCATGTGGTAGCATTAGA+AGG - chr6_3:59983289-59983308 Msa0955510:intron 40.0%
ATGTGGTAGCATTAGAAGGT+GGG - chr6_3:59983293-59983312 Msa0955510:intron 40.0%
TGATGCTACTAAGAGTTGAG+GGG - chr6_3:59983333-59983352 Msa0955510:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr6_3:59983378-59983397 Msa0955510:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr6_3:59983421-59983440 Msa0955510:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr6_3:59983422-59983441 Msa0955510:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr6_3:59983429-59983448 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr6_3:59983427-59983446 Msa0955510:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr6_3:59983453-59983472 Msa0955510:intron 40.0%
TTGAATATCCAGGCTTGCAA+AGG - chr6_3:59983762-59983781 Msa0955510:intron 40.0%
ATGGAAAGAGTTGCAGACTA+AGG - chr6_3:59983786-59983805 Msa0955510:intron 40.0%
AGCATACCTCTCTTTAATCC+TGG + chr6_3:59983830-59983849 None:intergenic 40.0%
GTTTCCTAACATGTGGTGAA+GGG + chr6_3:59983882-59983901 None:intergenic 40.0%
TGTTTCCTAACATGTGGTGA+AGG + chr6_3:59983883-59983902 None:intergenic 40.0%
!! AATTAGGTTGGCAAACAACC+GGG + chr6_3:59983980-59983999 None:intergenic 40.0%
!! CAATTAGGTTGGCAAACAAC+CGG + chr6_3:59983981-59984000 None:intergenic 40.0%
GGTTGTTTGCCAACCTAATT+GGG - chr6_3:59983980-59983999 Msa0955510:intron 40.0%
CGGAAAAATCCCAATTAGGT+TGG + chr6_3:59983992-59984011 None:intergenic 40.0%
AGACCGGAAAAATCCCAATT+AGG + chr6_3:59983996-59984015 None:intergenic 40.0%
TATTTAACCCAAGGGGTTGT+TGG - chr6_3:59984200-59984219 Msa0955510:intron 40.0%
AATTACACCAACAACCCCTT+GGG + chr6_3:59984210-59984229 None:intergenic 40.0%
TAATTACACCAACAACCCCT+TGG + chr6_3:59984211-59984230 None:intergenic 40.0%
!! CTTAACTTGTATTGGTCAGG+TGG - chr6_3:59985182-59985201 Msa0955510:intron 40.0%
CTGAGCTTGTCATCTTCTTC+AGG + chr6_3:59982714-59982733 None:intergenic 45.0%
CACCTTCTAATGCTACCACA+TGG + chr6_3:59983294-59983313 None:intergenic 45.0%
CATGTGGTAGCATTAGAAGG+TGG - chr6_3:59983292-59983311 Msa0955510:intron 45.0%
TAAGAGTTGAGGGGTAACCT+TGG - chr6_3:59983342-59983361 Msa0955510:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr6_3:59983384-59983403 Msa0955510:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr6_3:59983385-59983404 Msa0955510:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr6_3:59983418-59983437 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr6_3:59983449-59983468 Msa0955510:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr6_3:59983452-59983471 Msa0955510:intron 45.0%
TATCCAGGCTTGCAAAGGAA+TGG - chr6_3:59983767-59983786 Msa0955510:intron 45.0%
TTTCCATTCCTTTGCAAGCC+TGG + chr6_3:59983773-59983792 None:intergenic 45.0%
GAAAGAGTTGCAGACTAAGG+TGG - chr6_3:59983789-59983808 Msa0955510:intron 45.0%
TGGATTAACTACCTGAGACC+AGG - chr6_3:59983809-59983828 Msa0955510:intron 45.0%
CTCTCTTTAATCCTGGTCTC+AGG + chr6_3:59983823-59983842 None:intergenic 45.0%
CTGAGACCAGGATTAAAGAG+AGG - chr6_3:59983821-59983840 Msa0955510:intron 45.0%
AGGTATGCTCAGCAAACATG+AGG - chr6_3:59983841-59983860 Msa0955510:intron 45.0%
ATGACCCTTCACCACATGTT+AGG - chr6_3:59983875-59983894 Msa0955510:intron 45.0%
ATATATGGAGTAGGCGGTAG+AGG - chr6_3:59983946-59983965 Msa0955510:intron 45.0%
CGGTTGTTTGCCAACCTAAT+TGG - chr6_3:59983979-59983998 Msa0955510:intron 45.0%
CACAGGTCAGTTCCCAAATT+TGG - chr6_3:59984792-59984811 Msa0955510:intron 45.0%
! AACTAGATCATTTGGGACGG+AGG + chr6_3:59985015-59985034 None:intergenic 45.0%
CAGATTGCACAACAATTGCC+AGG - chr6_3:59985208-59985227 Msa0955510:intron 45.0%
TTGCACAACAATTGCCAGGA+AGG - chr6_3:59985212-59985231 Msa0955510:intron 45.0%
TACTGAGGTGTACTACTCAC+TGG - chr6_3:59985645-59985664 Msa0955510:CDS 45.0%
!!! TCTTTTATTTTATTTTTAAA+CGG + chr6_3:59983199-59983218 None:intergenic 5.0%
!!! TTTTGAATAATATATATATA+TGG - chr6_3:59983931-59983950 Msa0955510:intron 5.0%
TGAAGCATGGTCATAGCTGC+TGG - chr6_3:59982745-59982764 Msa0955510:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr6_3:59983362-59983381 None:intergenic 50.0%
GTAGCATCAAAAGGGCAACC+CGG + chr6_3:59983519-59983538 None:intergenic 50.0%
AGTAGGTGAGTGTGAGAGAC+CGG + chr6_3:59984012-59984031 None:intergenic 50.0%
CAAATGCCAGAAGGGCAGTT+TGG - chr6_3:59985586-59985605 Msa0955510:intron 50.0%
TCTTCACCAAACTGCCCTTC+TGG + chr6_3:59985595-59985614 None:intergenic 50.0%
AGCGCTGTCCCCATTAAAGC+TGG - chr6_3:59982768-59982787 Msa0955510:CDS 55.0%
CTCAAATTCACCGGCGCCAA+GGG + chr6_3:59982991-59983010 None:intergenic 55.0%
TCTCAAATTCACCGGCGCCA+AGG + chr6_3:59982992-59983011 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr6_3:59983397-59983416 Msa0955510:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + chr6_3:59983492-59983511 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG + chr6_3:59983493-59983512 None:intergenic 55.0%
ATGGAGTAGGCGGTAGAGGA+TGG - chr6_3:59983950-59983969 Msa0955510:intron 55.0%
TGGAGTAGGCGGTAGAGGAT+GGG - chr6_3:59983951-59983970 Msa0955510:intron 55.0%
ATCTCGTTGTCGGTCCTTCC+TGG + chr6_3:59985229-59985248 None:intergenic 55.0%
AGGCATACTTCCCTTGGCGC+CGG - chr6_3:59982978-59982997 Msa0955510:CDS 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr6_3:59983351-59983370 Msa0955510:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr6_3:59983465-59983484 Msa0955510:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr6_3:59983480-59983499 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr6_3:59983481-59983500 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr6_3:59983480-59983499 Msa0955510:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr6_3:59983481-59983500 Msa0955510:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - chr6_3:59983497-59983516 Msa0955510:intron 60.0%
CGGGAAGGGGTCCCACCATT+TGG + chr6_3:59983467-59983486 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr6_3:59983482-59983501 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr6_3:59983486-59983505 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr6_3:59983487-59983506 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - chr6_3:59983498-59983517 Msa0955510:intron 65.0%
GCGGTAGAGGATGGGAGTCC+CGG - chr6_3:59983959-59983978 Msa0955510:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 59982651 59985738 59982651 ID=Msa0955510;Name=Msa0955510
chr6_3 mRNA 59982651 59985738 59982651 ID=Msa0955510-mRNA-1;Parent=Msa0955510;Name=Msa0955510-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|268
chr6_3 exon 59985600 59985738 59985600 ID=Msa0955510-mRNA-1:exon:11803;Parent=Msa0955510-mRNA-1
chr6_3 exon 59984486 59984615 59984486 ID=Msa0955510-mRNA-1:exon:11802;Parent=Msa0955510-mRNA-1
chr6_3 exon 59982651 59983188 59982651 ID=Msa0955510-mRNA-1:exon:11801;Parent=Msa0955510-mRNA-1
chr6_3 CDS 59985600 59985738 59985600 ID=Msa0955510-mRNA-1:cds;Parent=Msa0955510-mRNA-1
chr6_3 CDS 59984486 59984615 59984486 ID=Msa0955510-mRNA-1:cds;Parent=Msa0955510-mRNA-1
chr6_3 CDS 59982651 59983188 59982651 ID=Msa0955510-mRNA-1:cds;Parent=Msa0955510-mRNA-1
Gene Sequence

>Msa0955510

ATGGGATTTCAGCTAGCAGAAAAAGTACCAAAATCAAAATACAGAAAGGGATTATGGTCACCTGAAGAAGATGACAAGCTCAGTGATTATATAATGAAGCATGGTCATAGCTGCTGGAGCGCTGTCCCCATTAAAGCTGGCTTGCAAAGGAATGGAAAGAGTTGCAGACTAAGGTGGATTAACTACCTGAGACCAGGATTAAAGAGAGGTATGCTCAGCAAACATGAGGAAGATAAAATCATGACCCTTCACCACATGTTAGGAAACAAGTGGTCTCAGATTGCACAACAATTGCCAGGAAGGACCGACAACGAGATTAAAAATTATTGGCATTCATATCTGAAAAAGAAAGAAGTCAAAAGTGATGATACAATGAACTCCTTACTCTCAACTCAAAAACATGAAATTCAAGATCCTAAATATGTGTTGTTAGAAAACATTAACAAATCAACAGCTACAACACACTCTGATCAATATATTTCAAAGAATTATAACACTGCCAATGAAGTTTGTCAAAGCTCATTACCAAGACTTTTATTTTCTGAGTGGCTCTCACTAGATCAAGTAAACTGTGGCAGCTCTCTAAATTCAGATGATTTTTTGGTCTTGAAAAATGGCTATGATCAAAATTTAATTTTTCAAGAAAACATTATTCAAATGCCAGAAGGGCAGTTTGGTGAAGAGTATCATGATAGTTTAATTCAAAATCTAGATACTGAGGTGTACTACTCACTGGATCAGTTATCAAATCAAGTGGATGAAAATGAATTGATCCACTATCTGAACAATGATGGAATGTATGTATGA
Protein sequence

>Msa0955510

MGFQLAEKVPKSKYRKGLWSPEEDDKLSDYIMKHGHSCWSAVPIKAGLQRNGKSCRLRWINYLRPGLKRGMLSKHEEDKIMTLHHMLGNKWSQIAQQLPGRTDNEIKNYWHSYLKKKEVKSDDTMNSLLSTQKHEIQDPKYVLLENINKSTATTHSDQYISKNYNTANEVCQSSLPRLLFSEWLSLDQVNCGSSLNSDDFLVLKNGYDQNLIFQENIIQMPEGQFGEEYHDSLIQNLDTEVYYSLDQLSNQVDENELIHYLNNDGMYV*