Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0956430 | RHN51754.1 | 81.242 | 757 | 73 | 9 | 70 | 809 | 22 | 726 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0956430 | sp|Q9SSE9|JMJ25_ARATH | 46.655 | 568 | 216 | 11 | 275 | 838 | 415 | 899 | 2.90e-151 | 473 |
Msa0956430 | sp|Q9SSE9|JMJ25_ARATH | 42.857 | 133 | 70 | 2 | 121 | 248 | 209 | 340 | 3.10e-24 | 113 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0956430 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0956430 | MtrunA17_Chr6g0472441 | 81.242 | 757 | 73 | 9 | 70 | 809 | 22 | 726 | 0.0 | 1192 |
Msa0956430 | MtrunA17_Chr5g0420361 | 71.163 | 808 | 161 | 9 | 30 | 795 | 2 | 779 | 0.0 | 1094 |
Msa0956430 | MtrunA17_Chr1g0183311 | 65.395 | 734 | 190 | 10 | 122 | 840 | 205 | 889 | 0.0 | 941 |
Msa0956430 | MtrunA17_Chr1g0211711 | 65.247 | 728 | 181 | 11 | 117 | 840 | 399 | 1058 | 0.0 | 931 |
Msa0956430 | MtrunA17_Chr5g0426961 | 61.885 | 711 | 185 | 11 | 129 | 835 | 209 | 837 | 0.0 | 818 |
Msa0956430 | MtrunA17_Chr1g0211661 | 60.095 | 634 | 192 | 9 | 125 | 754 | 289 | 865 | 0.0 | 731 |
Msa0956430 | MtrunA17_Chr1g0211691 | 62.309 | 589 | 164 | 9 | 124 | 702 | 405 | 945 | 0.0 | 706 |
Msa0956430 | MtrunA17_Chr5g0448301 | 47.531 | 648 | 251 | 12 | 82 | 724 | 68 | 631 | 0.0 | 537 |
Msa0956430 | MtrunA17_Chr2g0289121 | 42.976 | 719 | 292 | 19 | 121 | 830 | 210 | 819 | 5.71e-163 | 494 |
Msa0956430 | MtrunA17_Chr7g0275771 | 40.323 | 744 | 344 | 20 | 143 | 819 | 218 | 928 | 1.05e-158 | 487 |
Msa0956430 | MtrunA17_Chr4g0075261 | 41.488 | 699 | 325 | 20 | 121 | 801 | 222 | 854 | 1.32e-151 | 466 |
Msa0956430 | MtrunA17_Chr2g0289031 | 47.556 | 450 | 166 | 10 | 387 | 830 | 8 | 393 | 1.73e-117 | 362 |
Msa0956430 | MtrunA17_Chr1g0192011 | 32.528 | 704 | 381 | 17 | 138 | 823 | 341 | 968 | 2.26e-107 | 353 |
Msa0956430 | MtrunA17_Chr2g0281051 | 32.600 | 727 | 398 | 21 | 143 | 834 | 289 | 958 | 6.88e-94 | 316 |
Msa0956430 | MtrunA17_Chr1g0147021 | 40.568 | 493 | 233 | 13 | 121 | 604 | 925 | 1366 | 7.68e-91 | 315 |
Msa0956430 | MtrunA17_Chr1g0147021 | 62.893 | 159 | 58 | 1 | 643 | 801 | 1528 | 1685 | 5.26e-55 | 207 |
Msa0956430 | MtrunA17_Chr4g0048531 | 33.054 | 596 | 305 | 16 | 285 | 831 | 727 | 1277 | 8.17e-86 | 298 |
Msa0956430 | MtrunA17_Chr4g0048531 | 41.250 | 80 | 46 | 1 | 143 | 222 | 347 | 425 | 2.10e-12 | 71.2 |
Msa0956430 | MtrunA17_Chr8g0364421 | 44.649 | 271 | 97 | 6 | 177 | 447 | 10 | 227 | 6.08e-61 | 206 |
Msa0956430 | MtrunA17_Chr1g0211701 | 64.539 | 141 | 31 | 1 | 700 | 840 | 4 | 125 | 4.37e-56 | 190 |
Msa0956430 | MtrunA17_Chr2g0289091 | 71.171 | 111 | 32 | 0 | 666 | 776 | 310 | 420 | 2.71e-49 | 180 |
Msa0956430 | MtrunA17_Chr2g0289091 | 50.000 | 144 | 66 | 3 | 461 | 598 | 20 | 163 | 1.35e-34 | 137 |
Msa0956430 | MtrunA17_Chr8g0361381 | 47.895 | 190 | 88 | 6 | 383 | 568 | 26 | 208 | 5.99e-45 | 160 |
Msa0956430 | MtrunA17_Chr7g0231061 | 51.205 | 166 | 77 | 2 | 451 | 612 | 12 | 177 | 8.82e-44 | 157 |
Msa0956430 | MtrunA17_Chr8g0361391 | 75.000 | 88 | 21 | 1 | 667 | 754 | 51 | 137 | 1.73e-41 | 149 |
Msa0956430 | MtrunA17_Chr8g0340381 | 54.190 | 179 | 53 | 4 | 485 | 660 | 36 | 188 | 5.16e-40 | 146 |
Msa0956430 | MtrunA17_Chr2g0289041 | 40.000 | 170 | 91 | 6 | 121 | 287 | 35 | 196 | 1.93e-26 | 107 |
Msa0956430 | MtrunA17_Chr1g0211671 | 56.790 | 81 | 16 | 1 | 753 | 833 | 15 | 76 | 2.29e-20 | 87.8 |
Msa0956430 | MtrunA17_Chr3g0119761 | 55.844 | 77 | 34 | 0 | 554 | 630 | 55 | 131 | 3.74e-17 | 78.6 |
Msa0956430 | MtrunA17_Chr2g0289101 | 36.434 | 129 | 75 | 4 | 194 | 321 | 8 | 130 | 4.13e-17 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0956430 | AT1G62310.1 | 45.770 | 662 | 278 | 18 | 142 | 794 | 288 | 877 | 7.82e-176 | 530 |
Msa0956430 | AT1G11950.1 | 44.144 | 666 | 287 | 15 | 142 | 801 | 272 | 858 | 7.11e-172 | 520 |
Msa0956430 | AT1G11950.3 | 44.144 | 666 | 287 | 15 | 142 | 801 | 272 | 858 | 7.11e-172 | 520 |
Msa0956430 | AT4G00990.1 | 40.859 | 722 | 342 | 18 | 127 | 805 | 144 | 823 | 5.36e-156 | 477 |
Msa0956430 | AT3G07610.1 | 46.655 | 568 | 216 | 11 | 275 | 838 | 415 | 899 | 2.94e-152 | 473 |
Msa0956430 | AT3G07610.1 | 42.857 | 133 | 70 | 2 | 121 | 248 | 209 | 340 | 3.15e-25 | 113 |
Msa0956430 | AT3G07610.3 | 44.974 | 587 | 220 | 12 | 275 | 838 | 415 | 921 | 2.98e-145 | 455 |
Msa0956430 | AT3G07610.3 | 42.857 | 133 | 70 | 2 | 121 | 248 | 209 | 340 | 3.15e-25 | 113 |
Msa0956430 | AT1G11950.2 | 41.544 | 609 | 271 | 15 | 142 | 744 | 272 | 801 | 3.03e-140 | 435 |
Msa0956430 | AT4G00990.3 | 39.586 | 677 | 324 | 18 | 127 | 760 | 144 | 778 | 7.09e-136 | 423 |
Msa0956430 | AT4G00990.2 | 39.910 | 669 | 317 | 18 | 127 | 752 | 144 | 770 | 4.32e-135 | 421 |
Msa0956430 | AT1G09060.4 | 31.664 | 679 | 357 | 24 | 138 | 796 | 295 | 886 | 9.30e-82 | 282 |
Msa0956430 | AT1G09060.3 | 31.664 | 679 | 357 | 24 | 138 | 796 | 295 | 886 | 9.30e-82 | 282 |
Msa0956430 | AT1G09060.2 | 31.664 | 679 | 357 | 24 | 138 | 796 | 281 | 872 | 1.29e-81 | 282 |
Msa0956430 | AT1G09060.1 | 31.664 | 679 | 357 | 24 | 138 | 796 | 281 | 872 | 1.29e-81 | 282 |
Msa0956430 | AT3G07610.2 | 46.278 | 309 | 134 | 8 | 270 | 574 | 410 | 690 | 5.21e-70 | 246 |
Msa0956430 | AT3G07610.2 | 42.857 | 133 | 70 | 2 | 121 | 248 | 209 | 340 | 7.45e-25 | 111 |
Msa0956430 | AT4G21430.1 | 33.333 | 471 | 269 | 13 | 377 | 837 | 484 | 919 | 2.49e-64 | 233 |
Find 164 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATCTAATTCTCTTAAATA+TGG | 0.219846 | 6_3:+63726875 | None:intergenic |
ATCGACTTTACCTGCTTTAT+AGG | 0.238576 | 6_3:+63723957 | None:intergenic |
TTCAGATATTCATTCAATTT+AGG | 0.248120 | 6_3:+63724017 | None:intergenic |
TTACATTCATTATTAGCTTT+TGG | 0.259405 | 6_3:+63725940 | None:intergenic |
ATATCATCTTCCTTCTTAAC+AGG | 0.276535 | 6_3:+63725724 | None:intergenic |
ATATCATCTTCCTTCTTAAC+AGG | 0.276535 | 6_3:+63725778 | None:intergenic |
AGTACGTTGCTGACAATTAC+AGG | 0.277570 | 6_3:+63725568 | None:intergenic |
AGCATGAGATTCAATTTCTA+TGG | 0.285636 | 6_3:+63726035 | None:intergenic |
CTCTTTATCTTCAAGTTTAA+CGG | 0.287927 | 6_3:+63725834 | None:intergenic |
CTTCGTCGTGGGGAGCTTCT+AGG | 0.301830 | 6_3:-63726138 | Msa0956430:CDS |
CATCAAGAAAATAGTTTAGA+TGG | 0.330265 | 6_3:-63724074 | Msa0956430:CDS |
AATGTGAACGATTTCTTTAC+CGG | 0.331440 | 6_3:-63725276 | Msa0956430:CDS |
AGGCAATTGATTGCTTAAAT+TGG | 0.335529 | 6_3:-63725447 | Msa0956430:CDS |
TTCTTTACCGGGTACACAAA+TGG | 0.338422 | 6_3:-63725264 | Msa0956430:CDS |
ATGATTGTTAGTGAGATAAA+AGG | 0.342261 | 6_3:+63723770 | None:intergenic |
ACCAACTCAGAGATGCAATT+TGG | 0.347462 | 6_3:+63725883 | None:intergenic |
TCTGTGGAACAGTGATTTAC+TGG | 0.354305 | 6_3:+63723081 | None:intergenic |
GATGGTAGAGATTCAGTATC+TGG | 0.359930 | 6_3:-63727520 | Msa0956430:CDS |
AGTGATTTACTGGAAGTTTA+CGG | 0.362091 | 6_3:+63723091 | None:intergenic |
CTAGTCCATGGCTTCGTTGA+AGG | 0.367357 | 6_3:-63727542 | None:intergenic |
ATTCATGAATGGTCAAAATC+TGG | 0.368446 | 6_3:-63725997 | Msa0956430:CDS |
TCATGACTATAGATTCTTAC+TGG | 0.369789 | 6_3:-63722542 | Msa0956430:intron |
CAAGACAAGATGGAGCTTCT+TGG | 0.372889 | 6_3:-63724260 | Msa0956430:CDS |
GTTTCTTCTTCTTTGTCGCT+AGG | 0.377288 | 6_3:+63727482 | None:intergenic |
AAGAGGCTTAAGGAGGAGTA+TGG | 0.378678 | 6_3:-63723744 | Msa0956430:intron |
AGAAGCATTTCAGAGAGTTC+AGG | 0.389778 | 6_3:-63723995 | Msa0956430:CDS |
TACTAATCACAATTCAGTTT+CGG | 0.391063 | 6_3:-63725476 | Msa0956430:CDS |
TGCTCATCTGAAGCAGTTAC+GGG | 0.392512 | 6_3:+63724185 | None:intergenic |
TTCAATGGCACTGGAGAAAA+GGG | 0.397011 | 6_3:-63725594 | Msa0956430:CDS |
TTTCAATGGCACTGGAGAAA+AGG | 0.401004 | 6_3:-63725595 | Msa0956430:CDS |
TTGTGCCAAAGAGAAGAAAA+AGG | 0.402894 | 6_3:-63727275 | Msa0956430:CDS |
TCTGTGGTAGTCAAATATTA+AGG | 0.404685 | 6_3:+63726209 | None:intergenic |
GGAGCTTCTTGGTGATAATC+AGG | 0.408296 | 6_3:-63724249 | Msa0956430:CDS |
CTGGTTGTCCCCACCAAGTC+AGG | 0.408803 | 6_3:-63723570 | Msa0956430:CDS |
TTAGAGAATGATGAAGAAAC+TGG | 0.411838 | 6_3:-63727424 | Msa0956430:CDS |
TTGCTCATCTGAAGCAGTTA+CGG | 0.413932 | 6_3:+63724184 | None:intergenic |
CTGCTTCTTTGGTAACGAAC+AGG | 0.415793 | 6_3:-63722495 | Msa0956430:CDS |
CTGTTCCACAGAGGACAAAT+TGG | 0.419919 | 6_3:-63723070 | Msa0956430:CDS |
TGCAGATCCAGTTGAGTTTG+AGG | 0.420901 | 6_3:-63726112 | Msa0956430:CDS |
ATAGTTTAGATGGTGCTCTC+TGG | 0.426008 | 6_3:-63724064 | Msa0956430:CDS |
TTTGACCATTCATGAATCTC+AGG | 0.426830 | 6_3:+63726003 | None:intergenic |
AGAGAGTAATGCAGAGAAGA+AGG | 0.427096 | 6_3:-63727452 | Msa0956430:CDS |
TTGATAACCTCAAACTCAAC+TGG | 0.427926 | 6_3:+63726105 | None:intergenic |
AGGAAAATCGAGGTAGGAAA+AGG | 0.431979 | 6_3:-63727321 | Msa0956430:CDS |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_3:+63725700 | None:intergenic |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_3:+63725754 | None:intergenic |
AGAGAAGAAGAAGGAAAAGA+AGG | 0.443308 | 6_3:-63727229 | Msa0956430:CDS |
CAATCATAAGAAGAGGCTTA+AGG | 0.445426 | 6_3:-63723754 | Msa0956430:CDS |
AAAGAGGAGACTCTTGATAA+TGG | 0.452433 | 6_3:-63725817 | Msa0956430:CDS |
CCTTCAGATTCCTGACTTGG+TGG | 0.454218 | 6_3:+63723560 | None:intergenic |
GCTAATAATGAATGTAATCA+TGG | 0.455983 | 6_3:-63725934 | Msa0956430:CDS |
ACACAAATGGACGCAAAGAT+AGG | 0.456304 | 6_3:-63725251 | Msa0956430:CDS |
GACAAAATCAAGTGCAACCT+TGG | 0.456526 | 6_3:+63723158 | None:intergenic |
GGTAGTCAAATATTAAGGTT+TGG | 0.456642 | 6_3:+63726214 | None:intergenic |
CTTCAGATTCCTGACTTGGT+GGG | 0.460625 | 6_3:+63723561 | None:intergenic |
AAAGAAGGAGAAGAAAATGC+TGG | 0.464789 | 6_3:-63727214 | Msa0956430:CDS |
TTACCTTCAGATTCCTGACT+TGG | 0.467821 | 6_3:+63723557 | None:intergenic |
AAGGTATTTCAGCATATACT+TGG | 0.472386 | 6_3:+63726901 | None:intergenic |
GGATTCGTATATTCTTTAAA+CGG | 0.475206 | 6_3:+63725132 | None:intergenic |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_3:-63725709 | Msa0956430:CDS |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_3:-63725763 | Msa0956430:CDS |
TCGTATATTCTTTAAACGGC+AGG | 0.477691 | 6_3:+63725136 | None:intergenic |
GTACTTGAATCAAGCACATC+TGG | 0.479758 | 6_3:-63725550 | Msa0956430:CDS |
CACGGATTCGAGTTCCACTT+TGG | 0.480355 | 6_3:+63724325 | None:intergenic |
GAGATAGAAGCCAAGATTCA+AGG | 0.481462 | 6_3:-63726833 | Msa0956430:intron |
CAAGCACATCTGGTATAAGC+TGG | 0.481486 | 6_3:-63725540 | Msa0956430:CDS |
GCCAAATTGCATCTCTGAGT+TGG | 0.487551 | 6_3:-63725884 | Msa0956430:CDS |
GCTTGATGTGGTAGAAAAGT+TGG | 0.489208 | 6_3:-63722447 | Msa0956430:CDS |
GAAACTTGATTGCATGCATA+AGG | 0.491153 | 6_3:-63727185 | Msa0956430:intron |
GACTTGTAGGAATTGAGCCT+TGG | 0.491834 | 6_3:-63723633 | Msa0956430:intron |
ACTTGGTGGGGACAACCAGC+TGG | 0.495378 | 6_3:+63723574 | None:intergenic |
CGGAGCAGCAGCGGAGACAA+AGG | 0.495455 | 6_3:+63726163 | None:intergenic |
TTTCTTCTTCTTTGTCGCTA+GGG | 0.496852 | 6_3:+63727483 | None:intergenic |
AAGCTCCCCACGACGAAGCT+CGG | 0.497059 | 6_3:+63726143 | None:intergenic |
CTAAAGATCAGTGTGCATAC+TGG | 0.497463 | 6_3:-63726335 | Msa0956430:intron |
AAAGACCAAAGAGAAGAAGA+AGG | 0.502305 | 6_3:-63727238 | Msa0956430:CDS |
TGATTGCTTAAATTGGTGCC+AGG | 0.502959 | 6_3:-63725440 | Msa0956430:intron |
GGAACAAGTAGTGAAGAAGA+AGG | 0.503069 | 6_3:-63727341 | Msa0956430:CDS |
TAGTTTAGATGGTGCTCTCT+GGG | 0.506234 | 6_3:-63724063 | Msa0956430:CDS |
GCTGCTCCGAGCTTCGTCGT+GGG | 0.506497 | 6_3:-63726149 | Msa0956430:CDS |
AAATGAAAGTGCACTAGTCA+TGG | 0.509200 | 6_3:-63724141 | Msa0956430:CDS |
GCAAAATAGTGTTCGAGTCA+TGG | 0.509831 | 6_3:-63724165 | Msa0956430:CDS |
TCAAGAACAAATTGCTGAGA+AGG | 0.511113 | 6_3:-63726855 | Msa0956430:CDS |
CGTTAAACTTGAAGATAAAG+AGG | 0.512697 | 6_3:-63725833 | Msa0956430:CDS |
TTTGTCTCTCCTGAAAATGC+TGG | 0.513901 | 6_3:-63723141 | Msa0956430:CDS |
GCACCTTGAGCAAGACAAGA+TGG | 0.516831 | 6_3:-63724270 | Msa0956430:CDS |
CATGCAGATAATCTTGCCCT+TGG | 0.516962 | 6_3:+63726082 | None:intergenic |
TAAAAGGTCTGATCATGGAT+AGG | 0.519693 | 6_3:+63723786 | None:intergenic |
ATTCTCTTAAATATGGAAGA+AGG | 0.523817 | 6_3:+63726882 | None:intergenic |
TTCATGAATGGTCAAAATCT+GGG | 0.525657 | 6_3:-63725996 | Msa0956430:CDS |
GGGTGGCATGCCGGCAGTGA+TGG | 0.529308 | 6_3:-63725976 | Msa0956430:CDS |
GACGAAGCTCGGAGCAGCAG+CGG | 0.530073 | 6_3:+63726154 | None:intergenic |
AGGTTAAGAGCAGCTTTGAA+AGG | 0.531715 | 6_3:+63725111 | None:intergenic |
TCAAAATCTGGGTGGCATGC+CGG | 0.534124 | 6_3:-63725985 | Msa0956430:CDS |
TAGAAAAGTTGGAGAAAGCA+AGG | 0.543344 | 6_3:-63722436 | Msa0956430:intron |
CTAGTCATGGAAAATGAAAG+TGG | 0.543959 | 6_3:-63724128 | Msa0956430:CDS |
CTTAATTGCAGTAATACTCA+CGG | 0.545152 | 6_3:+63724307 | None:intergenic |
CAATTCAGTTTCGGATGTGA+AGG | 0.546118 | 6_3:-63725467 | Msa0956430:CDS |
TGAGATAAAAGGTCTGATCA+TGG | 0.546504 | 6_3:+63723781 | None:intergenic |
CTGCTCCGAGCTTCGTCGTG+GGG | 0.547255 | 6_3:-63726148 | Msa0956430:CDS |
TTTGCGTCCATTTGTGTACC+CGG | 0.548676 | 6_3:+63725257 | None:intergenic |
TCCATGGCTTCGTTGAAGGA+TGG | 0.552066 | 6_3:-63727538 | Msa0956430:CDS |
ATGGAGAGACCAATGTTGAC+AGG | 0.554177 | 6_3:-63724226 | Msa0956430:CDS |
ACCATCCTTCAACGAAGCCA+TGG | 0.557903 | 6_3:+63727537 | None:intergenic |
TTCAGATTCCTGACTTGGTG+GGG | 0.558050 | 6_3:+63723562 | None:intergenic |
AATGATGAAGAAACTGGTAA+AGG | 0.559773 | 6_3:-63727418 | Msa0956430:CDS |
CGTATATTCTTTAAACGGCA+GGG | 0.560384 | 6_3:+63725137 | None:intergenic |
GACGCAAAGATAGGCTCGAT+TGG | 0.561335 | 6_3:-63725242 | Msa0956430:CDS |
GCGGATGCTACCATCACTGC+CGG | 0.564083 | 6_3:+63725966 | None:intergenic |
CTATTGCTCTCCTATAAAGC+AGG | 0.564329 | 6_3:-63723967 | Msa0956430:intron |
AGAAGAAGGAAAATCGAGGT+AGG | 0.566155 | 6_3:-63727327 | Msa0956430:CDS |
AAAAGGTCTGATCATGGATA+GGG | 0.566516 | 6_3:+63723787 | None:intergenic |
AACTCAGAGATGCAATTTGG+CGG | 0.567921 | 6_3:+63725886 | None:intergenic |
TGCTGCTCCGAGCTTCGTCG+TGG | 0.568280 | 6_3:-63726150 | Msa0956430:CDS |
TAGCATGCAGCTTCAAAGCA+AGG | 0.568803 | 6_3:+63725091 | None:intergenic |
TCTTTCAATTTCAATAGTTG+AGG | 0.569152 | 6_3:+63725219 | None:intergenic |
TCACTAACAATCATAAGAAG+AGG | 0.571805 | 6_3:-63723761 | Msa0956430:CDS |
CTGCATGCTAATGTTCAGAT+GGG | 0.580666 | 6_3:-63725078 | Msa0956430:CDS |
CTCAGCCTGAGATTCATGAA+TGG | 0.580958 | 6_3:-63726008 | Msa0956430:CDS |
ATTATCAAGCCTGTCAACAT+TGG | 0.582130 | 6_3:+63724217 | None:intergenic |
GCTCCATCTTGTCTTGCTCA+AGG | 0.582704 | 6_3:+63724267 | None:intergenic |
GCTGCATGCTAATGTTCAGA+TGG | 0.585357 | 6_3:-63725079 | Msa0956430:CDS |
CCATTCAATTTACAGGTCTG+AGG | 0.586479 | 6_3:-63722197 | Msa0956430:intron |
AGTTTGAGGTTATCAACCAA+GGG | 0.590691 | 6_3:-63726098 | Msa0956430:CDS |
AAGCACATCTGGTATAAGCT+GGG | 0.598444 | 6_3:-63725539 | Msa0956430:CDS |
GAAGCAGTTACGGGAGAAGA+CGG | 0.599610 | 6_3:+63724194 | None:intergenic |
AAGTGGATCATGTGATATGA+AGG | 0.602990 | 6_3:-63724111 | Msa0956430:CDS |
TACCTCCAATTTGTCCTCTG+TGG | 0.606074 | 6_3:+63723065 | None:intergenic |
AGATCTGCAAAATCATGAGA+AGG | 0.607799 | 6_3:-63725629 | Msa0956430:CDS |
CGGCAGGGATGATATGAGCT+CGG | 0.608155 | 6_3:+63725152 | None:intergenic |
CTTCTTGGTGATAATCAGGA+TGG | 0.608495 | 6_3:-63724245 | Msa0956430:CDS |
CAAGGGCAAGATTATCTGCA+TGG | 0.609642 | 6_3:-63726081 | Msa0956430:CDS |
ATGTGAACGATTTCTTTACC+GGG | 0.609890 | 6_3:-63725275 | Msa0956430:CDS |
TTCCACAGAGGACAAATTGG+AGG | 0.610429 | 6_3:-63723067 | Msa0956430:intron |
GCTGGGAACCGCTTGTCATG+TGG | 0.613386 | 6_3:-63725522 | Msa0956430:CDS |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_3:-63725701 | Msa0956430:CDS |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_3:-63725755 | Msa0956430:CDS |
AGCTTCTGCACAAAACTCCA+AGG | 0.620328 | 6_3:+63723616 | None:intergenic |
ATCACAATGGAGCTTTGTCA+CGG | 0.621649 | 6_3:+63725002 | None:intergenic |
GAGTTTGAGGTTATCAACCA+AGG | 0.622153 | 6_3:-63726099 | Msa0956430:CDS |
GTTGACTCATATTGCCAAAG+TGG | 0.626432 | 6_3:-63724339 | Msa0956430:CDS |
GTGAAGAAGAAGGAAAATCG+AGG | 0.626702 | 6_3:-63727331 | Msa0956430:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_3:-63725708 | Msa0956430:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_3:-63725762 | Msa0956430:CDS |
TCATAAGAAGAGGCTTAAGG+AGG | 0.634907 | 6_3:-63723751 | Msa0956430:CDS |
GCGACAAAGAAGAAGAAACA+TGG | 0.635439 | 6_3:-63727478 | Msa0956430:CDS |
GAGTAATGCAGAGAAGAAGG+AGG | 0.638495 | 6_3:-63727449 | Msa0956430:CDS |
ATGATATGAGCTCGGCACAA+TGG | 0.653122 | 6_3:+63725160 | None:intergenic |
CGTCGTGGGGAGCTTCTAGG+TGG | 0.653994 | 6_3:-63726135 | Msa0956430:CDS |
AATGCATGCCACATGACAAG+CGG | 0.654461 | 6_3:+63725514 | None:intergenic |
GATCCAATCTCATGGAACAT+CGG | 0.659821 | 6_3:+63722171 | None:intergenic |
TGTACATGCTATGCTTGATG+TGG | 0.673006 | 6_3:-63722459 | Msa0956430:CDS |
CCACCAAGTCAGGAATCTGA+AGG | 0.679004 | 6_3:-63723560 | Msa0956430:intron |
TGGATCATGTGATATGAAGG+TGG | 0.679236 | 6_3:-63724108 | Msa0956430:CDS |
TCAATGGCACTGGAGAAAAG+GGG | 0.683003 | 6_3:-63725593 | Msa0956430:CDS |
TTCATGAATCTCAGGCTGAG+CGG | 0.683492 | 6_3:+63726011 | None:intergenic |
ATGAGCTCGGCACAATGGTG+TGG | 0.685553 | 6_3:+63725165 | None:intergenic |
GGGCAAGATTATCTGCATGG+TGG | 0.704928 | 6_3:-63726078 | Msa0956430:CDS |
TTTGTTGCAGTCATGCACCA+AGG | 0.714055 | 6_3:-63723175 | Msa0956430:intron |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_3:-63725704 | Msa0956430:CDS |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_3:-63725758 | Msa0956430:CDS |
ATGAATGGTCAAAATCTGGG+TGG | 0.728185 | 6_3:-63725993 | Msa0956430:CDS |
CTACATCAGACATATCACAA+TGG | 0.728251 | 6_3:+63724989 | None:intergenic |
AGTAAATCACTGTTCCACAG+AGG | 0.760358 | 6_3:-63723079 | Msa0956430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTTCTTAAATTATTTG+TGG | - | chr6_3:63723102-63723121 | Msa0956430:CDS | 15.0% |
!!! | CGTTTTATCTTTAAATTATT+AGG | + | chr6_3:63725159-63725178 | None:intergenic | 15.0% |
!! | TATACTCTTATCAATTAATT+TGG | - | chr6_3:63726708-63726727 | Msa0956430:intron | 15.0% |
!! | ATACTCTTATCAATTAATTT+GGG | - | chr6_3:63726709-63726728 | Msa0956430:intron | 15.0% |
!!! | TCAATTACTGAAAATTTTAT+GGG | - | chr6_3:63727009-63727028 | Msa0956430:intron | 15.0% |
!! | TGTTATGCATGTTATTAATA+AGG | - | chr6_3:63722588-63722607 | Msa0956430:intron | 20.0% |
!! | TGATCTAATTCTCTTAAATA+TGG | + | chr6_3:63722843-63722862 | None:intergenic | 20.0% |
!!! | CATTTTTTTCTTCTTTCTTT+TGG | - | chr6_3:63723216-63723235 | Msa0956430:intron | 20.0% |
!! | GAAATACAAACTTAATCAAA+AGG | + | chr6_3:63723282-63723301 | None:intergenic | 20.0% |
!!! | TTACATTCATTATTAGCTTT+TGG | + | chr6_3:63723778-63723797 | None:intergenic | 20.0% |
!!! | ATTAAGAAATTTTACAAACC+TGG | + | chr6_3:63724296-63724315 | None:intergenic | 20.0% |
!!! | AAACTTTTCTCAAACAAATT+AGG | + | chr6_3:63724529-63724548 | None:intergenic | 20.0% |
!!! | CTTACTACATATTTTTCTTA+TGG | - | chr6_3:63724661-63724680 | Msa0956430:intron | 20.0% |
!! | AAAAAATTAAGACATGTACT+TGG | + | chr6_3:63724876-63724895 | None:intergenic | 20.0% |
!!! | AAGTACATGTCTTAATTTTT+TGG | - | chr6_3:63724875-63724894 | Msa0956430:intron | 20.0% |
!!! | GATTGTTTTACATATTTTTG+TGG | - | chr6_3:63724993-63725012 | Msa0956430:CDS | 20.0% |
!! | ATAAGTTGTATCATTAGATA+AGG | - | chr6_3:63725069-63725088 | Msa0956430:CDS | 20.0% |
!!! | TCATTAGATAAGGTATTTTT+TGG | - | chr6_3:63725079-63725098 | Msa0956430:CDS | 20.0% |
!!! | TGTTTTGTTTCTTTACAATT+TGG | - | chr6_3:63725337-63725356 | Msa0956430:intron | 20.0% |
!! | TTCAGATATTCATTCAATTT+AGG | + | chr6_3:63725701-63725720 | None:intergenic | 20.0% |
!!! | AGCTATTGATAACTAAAATA+TGG | - | chr6_3:63725841-63725860 | Msa0956430:CDS | 20.0% |
!!! | ATTGATAACTAAAATATGGT+AGG | - | chr6_3:63725845-63725864 | Msa0956430:CDS | 20.0% |
!! | TTCTTGAATGACATATATAT+TGG | - | chr6_3:63725889-63725908 | Msa0956430:CDS | 20.0% |
!! | ATGTTGAATTGTTAACAAAA+TGG | + | chr6_3:63726061-63726080 | None:intergenic | 20.0% |
!! | ATGATTGGTATTTATAACTA+TGG | - | chr6_3:63726194-63726213 | Msa0956430:CDS | 20.0% |
!!! | TATGGAAGTATACAATTATT+AGG | + | chr6_3:63726304-63726323 | None:intergenic | 20.0% |
!! | GGTAAAATATGTTTAATTCA+AGG | + | chr6_3:63726936-63726955 | None:intergenic | 20.0% |
!!! | GTCAATTACTGAAAATTTTA+TGG | - | chr6_3:63727008-63727027 | Msa0956430:intron | 20.0% |
!!! | TCTTTGAAAAAAGGTATAAT+TGG | - | chr6_3:63727082-63727101 | Msa0956430:intron | 20.0% |
!!! | TTTTTGCTTATAATAGTGAT+CGG | + | chr6_3:63727345-63727364 | None:intergenic | 20.0% |
!! | GATTGAATAACTAATGTATA+TGG | + | chr6_3:63727421-63727440 | None:intergenic | 20.0% |
! | TACAAAGAAAAAACTGAAGA+AGG | - | chr6_3:63722353-63722372 | Msa0956430:intron | 25.0% |
! | CATAGTAATAACATCTTTGA+GGG | + | chr6_3:63722616-63722635 | None:intergenic | 25.0% |
! | TCATAGTAATAACATCTTTG+AGG | + | chr6_3:63722617-63722636 | None:intergenic | 25.0% |
! | ATTCTCTTAAATATGGAAGA+AGG | + | chr6_3:63722836-63722855 | None:intergenic | 25.0% |
! | TCTTAAATTATTTGTGGTGT+CGG | - | chr6_3:63723108-63723127 | Msa0956430:CDS | 25.0% |
! | GCTAATAATGAATGTAATCA+TGG | - | chr6_3:63723781-63723800 | Msa0956430:CDS | 25.0% |
!! | CTCTTTATCTTCAAGTTTAA+CGG | + | chr6_3:63723884-63723903 | None:intergenic | 25.0% |
!! | ACAGTATAAAAAGTTTTCAC+CGG | + | chr6_3:63724055-63724074 | None:intergenic | 25.0% |
!! | AAAACTTTTTATACTGTCCT+AGG | - | chr6_3:63724058-63724077 | Msa0956430:CDS | 25.0% |
!! | AAACTTTTTATACTGTCCTA+GGG | - | chr6_3:63724059-63724078 | Msa0956430:CDS | 25.0% |
!!! | AGGATTTAAGACATTTTCAA+TGG | - | chr6_3:63724106-63724125 | Msa0956430:CDS | 25.0% |
! | TACTAATCACAATTCAGTTT+CGG | - | chr6_3:63724239-63724258 | Msa0956430:CDS | 25.0% |
! | TCTTTCAATTTCAATAGTTG+AGG | + | chr6_3:63724499-63724518 | None:intergenic | 25.0% |
! | GGATTCGTATATTCTTTAAA+CGG | + | chr6_3:63724586-63724605 | None:intergenic | 25.0% |
!! | TTTTTCTTATGGATTTTCTG+AGG | - | chr6_3:63724672-63724691 | Msa0956430:intron | 25.0% |
!! | ATAAATCTTTTGATGCTTAG+AGG | - | chr6_3:63724796-63724815 | Msa0956430:intron | 25.0% |
!! | AATCAAATGAGTGTTTTCAA+AGG | + | chr6_3:63724910-63724929 | None:intergenic | 25.0% |
! | ACTTGGAACTTCATAAATAT+TGG | + | chr6_3:63724960-63724979 | None:intergenic | 25.0% |
!!! | TACATATTTTTGTGGTGTTT+TGG | - | chr6_3:63725001-63725020 | Msa0956430:CDS | 25.0% |
! | ATGAGTTGTATCATTAGATA+AGG | - | chr6_3:63725190-63725209 | Msa0956430:CDS | 25.0% |
!!! | TCATTAGATAAGGTACTTTT+TGG | - | chr6_3:63725200-63725219 | Msa0956430:CDS | 25.0% |
!!! | TCTTTACAATTTGGCTTTTT+AGG | - | chr6_3:63725346-63725365 | Msa0956430:intron | 25.0% |
! | CATCAAGAAAATAGTTTAGA+TGG | - | chr6_3:63725641-63725660 | Msa0956430:CDS | 25.0% |
!!! | GACATATATATTGGTAATGT+AGG | - | chr6_3:63725898-63725917 | Msa0956430:CDS | 25.0% |
! | ATGATTGTTAGTGAGATAAA+AGG | + | chr6_3:63725948-63725967 | None:intergenic | 25.0% |
! | GGAATGTTTAAATGAGAATA+TGG | + | chr6_3:63726322-63726341 | None:intergenic | 25.0% |
! | TTCTCATTTAAACATTCCTA+AGG | - | chr6_3:63726324-63726343 | Msa0956430:intron | 25.0% |
! | TCTCATTTAAACATTCCTAA+GGG | - | chr6_3:63726325-63726344 | Msa0956430:intron | 25.0% |
! | ATTCTTCAATCCATATCATT+TGG | - | chr6_3:63726366-63726385 | Msa0956430:CDS | 25.0% |
! | ATCTAGATATCCAAATGATA+TGG | + | chr6_3:63726379-63726398 | None:intergenic | 25.0% |
!!! | GGTATTCTAGACTAATTTTT+TGG | - | chr6_3:63726669-63726688 | Msa0956430:intron | 25.0% |
!! | CTGAAAATTTTATGGGAAAT+AGG | - | chr6_3:63727016-63727035 | Msa0956430:intron | 25.0% |
!! | TCGAATTTCTCTTTGAAAAA+AGG | - | chr6_3:63727073-63727092 | Msa0956430:intron | 25.0% |
!! | TAGCATACTTTAGTTTCTTT+AGG | - | chr6_3:63727479-63727498 | Msa0956430:CDS | 25.0% |
TTAGAGAATGATGAAGAAAC+TGG | - | chr6_3:63722291-63722310 | Msa0956430:intron | 30.0% | |
AATGATGAAGAAACTGGTAA+AGG | - | chr6_3:63722297-63722316 | Msa0956430:intron | 30.0% | |
ATGTAGAACACAGAAAACAA+AGG | + | chr6_3:63722707-63722726 | None:intergenic | 30.0% | |
TTCATCATCTTATTCTCTAC+AGG | - | chr6_3:63722743-63722762 | Msa0956430:intron | 30.0% | |
! | AAGGTATTTCAGCATATACT+TGG | + | chr6_3:63722817-63722836 | None:intergenic | 30.0% |
GGAAAAAATACCTTGAATCT+TGG | + | chr6_3:63722895-63722914 | None:intergenic | 30.0% | |
!!! | TTCAAGGTATTTTTTCCTCA+AGG | - | chr6_3:63722898-63722917 | Msa0956430:intron | 30.0% |
! | TTTCTCTGCCTATGTTTTAT+AGG | - | chr6_3:63722951-63722970 | Msa0956430:intron | 30.0% |
TACTATGAAGTAGTCAGATA+CGG | + | chr6_3:63723163-63723182 | None:intergenic | 30.0% | |
GGTAGTCAAATATTAAGGTT+TGG | + | chr6_3:63723504-63723523 | None:intergenic | 30.0% | |
TCTGTGGTAGTCAAATATTA+AGG | + | chr6_3:63723509-63723528 | None:intergenic | 30.0% | |
AGCATGAGATTCAATTTCTA+TGG | + | chr6_3:63723683-63723702 | None:intergenic | 30.0% | |
ATTCATGAATGGTCAAAATC+TGG | - | chr6_3:63723718-63723737 | Msa0956430:intron | 30.0% | |
TTCATGAATGGTCAAAATCT+GGG | - | chr6_3:63723719-63723738 | Msa0956430:intron | 30.0% | |
CGTTAAACTTGAAGATAAAG+AGG | - | chr6_3:63723882-63723901 | Msa0956430:intron | 30.0% | |
!!! | TTGTTTTAAGCCTGTTAAGA+AGG | - | chr6_3:63723927-63723946 | Msa0956430:intron | 30.0% |
ATATCATCTTCCTTCTTAAC+AGG | + | chr6_3:63723940-63723959 | None:intergenic | 30.0% | |
ATATCATCTTCCTTCTTAAC+AGG | + | chr6_3:63723940-63723959 | None:intergenic | 30.0% | |
AGGCAATTGATTGCTTAAAT+TGG | - | chr6_3:63724268-63724287 | Msa0956430:CDS | 30.0% | |
! | TTGAGTTGTTGATTAAATGC+AGG | - | chr6_3:63724408-63724427 | Msa0956430:intron | 30.0% |
! | TGAGTTGTTGATTAAATGCA+GGG | - | chr6_3:63724409-63724428 | Msa0956430:intron | 30.0% |
AATGTGAACGATTTCTTTAC+CGG | - | chr6_3:63724439-63724458 | Msa0956430:intron | 30.0% | |
! | CTTTTCTCAAACAAATTAGG+AGG | + | chr6_3:63724526-63724545 | None:intergenic | 30.0% |
ACTTGGAACTTCATAATTGT+CGG | + | chr6_3:63724859-63724878 | None:intergenic | 30.0% | |
TATGAAGTTCCAAGTTCATT+TGG | - | chr6_3:63724965-63724984 | Msa0956430:intron | 30.0% | |
AATCAACAACCAAATGAACT+TGG | + | chr6_3:63724977-63724996 | None:intergenic | 30.0% | |
CTTAATTGCAGTAATACTCA+CGG | + | chr6_3:63725411-63725430 | None:intergenic | 30.0% | |
GAGAAAACAAGAGAAAATGA+AGG | + | chr6_3:63725821-63725840 | None:intergenic | 30.0% | |
TCACTAACAATCATAAGAAG+AGG | - | chr6_3:63725954-63725973 | Msa0956430:CDS | 30.0% | |
! | ATAATTTTCCGTACGTTGTT+TGG | - | chr6_3:63726006-63726025 | Msa0956430:CDS | 30.0% |
!! | ACAATTCAACATTGACTTGT+AGG | - | chr6_3:63726069-63726088 | Msa0956430:CDS | 30.0% |
AGTGATTTACTGGAAGTTTA+CGG | + | chr6_3:63726627-63726646 | None:intergenic | 30.0% | |
TCATAGCAGTTTCAAAATCT+CGG | - | chr6_3:63726788-63726807 | Msa0956430:intron | 30.0% | |
TTACAATACAGTTACTAGAG+CGG | + | chr6_3:63726987-63727006 | None:intergenic | 30.0% | |
AATCTATAGTCATGACATGA+TGG | + | chr6_3:63727168-63727187 | None:intergenic | 30.0% | |
TCATGACTATAGATTCTTAC+TGG | - | chr6_3:63727173-63727192 | Msa0956430:intron | 30.0% | |
!! | GGTATTGTGTATTGTTTTTC+TGG | - | chr6_3:63727194-63727213 | Msa0956430:CDS | 30.0% |
TTTCTTCTTCTTTGTCGCTA+GGG | + | chr6_3:63722235-63722254 | None:intergenic | 35.0% | |
! | TTTGTACCACGTCTTTTTCT+TGG | + | chr6_3:63722339-63722358 | None:intergenic | 35.0% |
TTGTGCCAAAGAGAAGAAAA+AGG | - | chr6_3:63722440-63722459 | Msa0956430:CDS | 35.0% | |
! | CTTCACCTTTTTCTTCTCTT+TGG | + | chr6_3:63722448-63722467 | None:intergenic | 35.0% |
AGAGAAGAAAAAGGTGAAGA+AGG | - | chr6_3:63722449-63722468 | Msa0956430:CDS | 35.0% | |
AAAGACCAAAGAGAAGAAGA+AGG | - | chr6_3:63722477-63722496 | Msa0956430:CDS | 35.0% | |
! | CTTTTCCTTCTTCTTCTCTT+TGG | + | chr6_3:63722485-63722504 | None:intergenic | 35.0% |
AGAGAAGAAGAAGGAAAAGA+AGG | - | chr6_3:63722486-63722505 | Msa0956430:CDS | 35.0% | |
AAAGAAGGAGAAGAAAATGC+TGG | - | chr6_3:63722501-63722520 | Msa0956430:CDS | 35.0% | |
GAAACTTGATTGCATGCATA+AGG | - | chr6_3:63722530-63722549 | Msa0956430:CDS | 35.0% | |
TTACAAATGCCACAACACAA+AGG | + | chr6_3:63722659-63722678 | None:intergenic | 35.0% | |
TCAAGAACAAATTGCTGAGA+AGG | - | chr6_3:63722860-63722879 | Msa0956430:intron | 35.0% | |
GGCAGAGAAAGAAAAAAGAA+AGG | + | chr6_3:63722941-63722960 | None:intergenic | 35.0% | |
GTGTCTGACCTATAAAACAT+AGG | + | chr6_3:63722962-63722981 | None:intergenic | 35.0% | |
TTCAGTGTAGTCATATGTGT+CGG | + | chr6_3:63723070-63723089 | None:intergenic | 35.0% | |
!!! | CTTTTGGGTTGAACATTACA+GGG | - | chr6_3:63723314-63723333 | Msa0956430:intron | 35.0% |
ACTGGTAGGGACTTATAATT+TGG | - | chr6_3:63723398-63723417 | Msa0956430:intron | 35.0% | |
! | TTGATAACCTCAAACTCAAC+TGG | + | chr6_3:63723613-63723632 | None:intergenic | 35.0% |
! | AGTTTGAGGTTATCAACCAA+GGG | - | chr6_3:63723617-63723636 | Msa0956430:CDS | 35.0% |
TTTGACCATTCATGAATCTC+AGG | + | chr6_3:63723715-63723734 | None:intergenic | 35.0% | |
!!! | CATTATTAGCTTTTGGACAG+CGG | + | chr6_3:63723771-63723790 | None:intergenic | 35.0% |
AAAGAGGAGACTCTTGATAA+TGG | - | chr6_3:63723898-63723917 | Msa0956430:intron | 35.0% | |
ATGATATACCGAATGATCCA+GGG | - | chr6_3:63723953-63723972 | Msa0956430:intron | 35.0% | |
!! | GGTTTTTAAGCCTGTTAAGA+AGG | - | chr6_3:63723981-63724000 | Msa0956430:CDS | 35.0% |
ATGATATACCGAATGATCCA+GGG | - | chr6_3:63723953-63723972 | Msa0956430:intron | 35.0% | |
AGATCTGCAAAATCATGAGA+AGG | - | chr6_3:63724086-63724105 | Msa0956430:CDS | 35.0% | |
! | TAAGACATTTTCAATGGCAC+TGG | - | chr6_3:63724112-63724131 | Msa0956430:CDS | 35.0% |
ATGTGAACGATTTCTTTACC+GGG | - | chr6_3:63724440-63724459 | Msa0956430:intron | 35.0% | |
CGTATATTCTTTAAACGGCA+GGG | + | chr6_3:63724581-63724600 | None:intergenic | 35.0% | |
TCGTATATTCTTTAAACGGC+AGG | + | chr6_3:63724582-63724601 | None:intergenic | 35.0% | |
CTACATCAGACATATCACAA+TGG | + | chr6_3:63724729-63724748 | None:intergenic | 35.0% | |
! | CATTCTAGAAAACACAGTTC+AGG | + | chr6_3:63724772-63724791 | None:intergenic | 35.0% |
GATGTGTACAATGTCTTTGT+AGG | - | chr6_3:63724818-63724837 | Msa0956430:intron | 35.0% | |
ATTATCAAGCCTGTCAACAT+TGG | + | chr6_3:63725501-63725520 | None:intergenic | 35.0% | |
! | AAATGAAAGTGCACTAGTCA+TGG | - | chr6_3:63725574-63725593 | Msa0956430:CDS | 35.0% |
CTAGTCATGGAAAATGAAAG+TGG | - | chr6_3:63725587-63725606 | Msa0956430:CDS | 35.0% | |
AAGTGGATCATGTGATATGA+AGG | - | chr6_3:63725604-63725623 | Msa0956430:CDS | 35.0% | |
! | ATCGACTTTACCTGCTTTAT+AGG | + | chr6_3:63725761-63725780 | None:intergenic | 35.0% |
AAAAGGTCTGATCATGGATA+GGG | + | chr6_3:63725931-63725950 | None:intergenic | 35.0% | |
TAAAAGGTCTGATCATGGAT+AGG | + | chr6_3:63725932-63725951 | None:intergenic | 35.0% | |
TGAGATAAAAGGTCTGATCA+TGG | + | chr6_3:63725937-63725956 | None:intergenic | 35.0% | |
CAATCATAAGAAGAGGCTTA+AGG | - | chr6_3:63725961-63725980 | Msa0956430:CDS | 35.0% | |
AACAAAATGGCACAAGTCTA+TGG | + | chr6_3:63726048-63726067 | None:intergenic | 35.0% | |
GTCTCAAACTTTCAAGAACT+TGG | + | chr6_3:63726278-63726297 | None:intergenic | 35.0% | |
CATTTAAACATTCCTAAGGG+AGG | - | chr6_3:63726328-63726347 | Msa0956430:intron | 35.0% | |
AAGATATCAGAACCTCCATT+GGG | + | chr6_3:63726431-63726450 | None:intergenic | 35.0% | |
TAAGATATCAGAACCTCCAT+TGG | + | chr6_3:63726432-63726451 | None:intergenic | 35.0% | |
CAGTAAACTTCACCAATTGT+TGG | - | chr6_3:63726850-63726869 | Msa0956430:CDS | 35.0% | |
TTTGTCGAAATCGGTTGAAA+TGG | - | chr6_3:63726888-63726907 | Msa0956430:CDS | 35.0% | |
TTTACCATCTAGATTCTGCA+AGG | - | chr6_3:63726950-63726969 | Msa0956430:CDS | 35.0% | |
!! | AGATTCTGCAAGGTGTTATT+TGG | - | chr6_3:63726960-63726979 | Msa0956430:intron | 35.0% |
TAGAAAAGTTGGAGAAAGCA+AGG | - | chr6_3:63727279-63727298 | Msa0956430:CDS | 35.0% | |
GGTTAGTGATTGCAAACTTA+AGG | - | chr6_3:63727300-63727319 | Msa0956430:CDS | 35.0% | |
TGCTTATAATAGTGATCGGA+TGG | + | chr6_3:63727341-63727360 | None:intergenic | 35.0% | |
ATTGAATAACTGACGTGTGT+CGG | - | chr6_3:63727381-63727400 | Msa0956430:CDS | 35.0% | |
TTGCCTACCATTCAATTTAC+AGG | - | chr6_3:63727511-63727530 | Msa0956430:CDS | 35.0% | |
AGACCTGTAAATTGAATGGT+AGG | + | chr6_3:63727517-63727536 | None:intergenic | 35.0% | |
GATGGTAGAGATTCAGTATC+TGG | - | chr6_3:63722195-63722214 | Msa0956430:intron | 40.0% | |
GTTTCTTCTTCTTTGTCGCT+AGG | + | chr6_3:63722236-63722255 | None:intergenic | 40.0% | |
GCGACAAAGAAGAAGAAACA+TGG | - | chr6_3:63722237-63722256 | Msa0956430:intron | 40.0% | |
AGAGAGTAATGCAGAGAAGA+AGG | - | chr6_3:63722263-63722282 | Msa0956430:intron | 40.0% | |
GGAACAAGTAGTGAAGAAGA+AGG | - | chr6_3:63722374-63722393 | Msa0956430:intron | 40.0% | |
GTGAAGAAGAAGGAAAATCG+AGG | - | chr6_3:63722384-63722403 | Msa0956430:intron | 40.0% | |
AGAAGAAGGAAAATCGAGGT+AGG | - | chr6_3:63722388-63722407 | Msa0956430:intron | 40.0% | |
AGGAAAATCGAGGTAGGAAA+AGG | - | chr6_3:63722394-63722413 | Msa0956430:intron | 40.0% | |
GAGATAGAAGCCAAGATTCA+AGG | - | chr6_3:63722882-63722901 | Msa0956430:intron | 40.0% | |
TTTATAGGTCAGACACTCCT+CGG | - | chr6_3:63722966-63722985 | Msa0956430:intron | 40.0% | |
!! | AATTATTTGTGGTGTCGGTG+TGG | - | chr6_3:63723113-63723132 | Msa0956430:CDS | 40.0% |
! | TTTCATCTCATGCCTGCTTT+TGG | - | chr6_3:63723298-63723317 | Msa0956430:intron | 40.0% |
!! | TTCATCTCATGCCTGCTTTT+GGG | - | chr6_3:63723299-63723318 | Msa0956430:intron | 40.0% |
GTAATGTTCAACCCAAAAGC+AGG | + | chr6_3:63723313-63723332 | None:intergenic | 40.0% | |
!!! | GCTTTTGGGTTGAACATTAC+AGG | - | chr6_3:63723313-63723332 | Msa0956430:intron | 40.0% |
CTAAAGATCAGTGTGCATAC+TGG | - | chr6_3:63723380-63723399 | Msa0956430:intron | 40.0% | |
! | AGCATTTTGTACAGCTTCTG+TGG | + | chr6_3:63723525-63723544 | None:intergenic | 40.0% |
! | GAGTTTGAGGTTATCAACCA+AGG | - | chr6_3:63723616-63723635 | Msa0956430:CDS | 40.0% |
ATGAATGGTCAAAATCTGGG+TGG | - | chr6_3:63723722-63723741 | Msa0956430:intron | 40.0% | |
AACTCAGAGATGCAATTTGG+CGG | + | chr6_3:63723832-63723851 | None:intergenic | 40.0% | |
ACCAACTCAGAGATGCAATT+TGG | + | chr6_3:63723835-63723854 | None:intergenic | 40.0% | |
GATGATATACCGAATGATCC+AGG | - | chr6_3:63723952-63723971 | Msa0956430:intron | 40.0% | |
GATGATATACCGAATGATCC+AGG | - | chr6_3:63723952-63723971 | Msa0956430:intron | 40.0% | |
! | GTGGTTTTTCGTGAAGATTC+CGG | - | chr6_3:63724033-63724052 | Msa0956430:CDS | 40.0% |
! | TTTTGCAGATCTATAGCCCT+AGG | + | chr6_3:63724078-63724097 | None:intergenic | 40.0% |
! | TTTCAATGGCACTGGAGAAA+AGG | - | chr6_3:63724120-63724139 | Msa0956430:CDS | 40.0% |
! | TTCAATGGCACTGGAGAAAA+GGG | - | chr6_3:63724121-63724140 | Msa0956430:CDS | 40.0% |
AGTACGTTGCTGACAATTAC+AGG | + | chr6_3:63724150-63724169 | None:intergenic | 40.0% | |
GTACTTGAATCAAGCACATC+TGG | - | chr6_3:63724165-63724184 | Msa0956430:CDS | 40.0% | |
AAGCACATCTGGTATAAGCT+GGG | - | chr6_3:63724176-63724195 | Msa0956430:CDS | 40.0% | |
CAATTCAGTTTCGGATGTGA+AGG | - | chr6_3:63724248-63724267 | Msa0956430:CDS | 40.0% | |
! | TGATTGCTTAAATTGGTGCC+AGG | - | chr6_3:63724275-63724294 | Msa0956430:CDS | 40.0% |
TTCTTTACCGGGTACACAAA+TGG | - | chr6_3:63724451-63724470 | Msa0956430:intron | 40.0% | |
ACACAAATGGACGCAAAGAT+AGG | - | chr6_3:63724464-63724483 | Msa0956430:intron | 40.0% | |
!! | AGGTTAAGAGCAGCTTTGAA+AGG | + | chr6_3:63724607-63724626 | None:intergenic | 40.0% |
CTGCATGCTAATGTTCAGAT+GGG | - | chr6_3:63724637-63724656 | Msa0956430:intron | 40.0% | |
!! | TATGGATTTTCTGAGGAGCT+TGG | - | chr6_3:63724679-63724698 | Msa0956430:intron | 40.0% |
!! | ATGGATTTTCTGAGGAGCTT+GGG | - | chr6_3:63724680-63724699 | Msa0956430:intron | 40.0% |
! | ATCACAATGGAGCTTTGTCA+CGG | + | chr6_3:63724716-63724735 | None:intergenic | 40.0% |
TGAAGCATGAACGATGACTT+CGG | - | chr6_3:63725226-63725245 | Msa0956430:CDS | 40.0% | |
! | GTTGACTCATATTGCCAAAG+TGG | - | chr6_3:63725376-63725395 | Msa0956430:intron | 40.0% |
! | CTTCTTGGTGATAATCAGGA+TGG | - | chr6_3:63725470-63725489 | Msa0956430:CDS | 40.0% |
! | TTGCTCATCTGAAGCAGTTA+CGG | + | chr6_3:63725534-63725553 | None:intergenic | 40.0% |
GCAAAATAGTGTTCGAGTCA+TGG | - | chr6_3:63725550-63725569 | Msa0956430:CDS | 40.0% | |
TGGATCATGTGATATGAAGG+TGG | - | chr6_3:63725607-63725626 | Msa0956430:CDS | 40.0% | |
ATAGTTTAGATGGTGCTCTC+TGG | - | chr6_3:63725651-63725670 | Msa0956430:CDS | 40.0% | |
TAGTTTAGATGGTGCTCTCT+GGG | - | chr6_3:63725652-63725671 | Msa0956430:CDS | 40.0% | |
!!! | GTGCTCTCTGGGATATTTTT+CGG | - | chr6_3:63725663-63725682 | Msa0956430:CDS | 40.0% |
!! | AGAAGCATTTCAGAGAGTTC+AGG | - | chr6_3:63725720-63725739 | Msa0956430:CDS | 40.0% |
CTATTGCTCTCCTATAAAGC+AGG | - | chr6_3:63725748-63725767 | Msa0956430:CDS | 40.0% | |
TCATAAGAAGAGGCTTAAGG+AGG | - | chr6_3:63725964-63725983 | Msa0956430:CDS | 40.0% | |
TCCACAAACCAAACAACGTA+CGG | + | chr6_3:63726017-63726036 | None:intergenic | 40.0% | |
TTAAACATTCCTAAGGGAGG+CGG | - | chr6_3:63726331-63726350 | Msa0956430:intron | 40.0% | |
GACTCGAATAGCGTGATAAT+TGG | - | chr6_3:63726402-63726421 | Msa0956430:intron | 40.0% | |
ACATAACAGTGATCAGCTAC+TGG | + | chr6_3:63726462-63726481 | None:intergenic | 40.0% | |
GACAAAATCAAGTGCAACCT+TGG | + | chr6_3:63726560-63726579 | None:intergenic | 40.0% | |
TTTGTCTCTCCTGAAAATGC+TGG | - | chr6_3:63726574-63726593 | Msa0956430:intron | 40.0% | |
TCTGTGGAACAGTGATTTAC+TGG | + | chr6_3:63726637-63726656 | None:intergenic | 40.0% | |
AGTAAATCACTGTTCCACAG+AGG | - | chr6_3:63726636-63726655 | Msa0956430:intron | 40.0% | |
CTTGACCTACCAAAACAGTT+GGG | - | chr6_3:63726811-63726830 | Msa0956430:intron | 40.0% | |
CATGCTGCATTTGTCGAAAT+CGG | - | chr6_3:63726879-63726898 | Msa0956430:CDS | 40.0% | |
AACACCTTGCAGAATCTAGA+TGG | + | chr6_3:63726957-63726976 | None:intergenic | 40.0% | |
!!! | TTTTCTGGTTGCTGCTTCTT+TGG | - | chr6_3:63727209-63727228 | Msa0956430:CDS | 40.0% |
TGTACATGCTATGCTTGATG+TGG | - | chr6_3:63727256-63727275 | Msa0956430:CDS | 40.0% | |
GCTTGATGTGGTAGAAAAGT+TGG | - | chr6_3:63727268-63727287 | Msa0956430:CDS | 40.0% | |
GATTGCAAACTTAAGGCGAA+AGG | - | chr6_3:63727307-63727326 | Msa0956430:CDS | 40.0% | |
CCTCAGACCTGTAAATTGAA+TGG | + | chr6_3:63727521-63727540 | None:intergenic | 40.0% | |
CCATTCAATTTACAGGTCTG+AGG | - | chr6_3:63727518-63727537 | Msa0956430:CDS | 40.0% | |
GAGTAATGCAGAGAAGAAGG+AGG | - | chr6_3:63722266-63722285 | Msa0956430:intron | 45.0% | |
AGCGATCCAAGAAAAAGACG+TGG | - | chr6_3:63722330-63722349 | Msa0956430:intron | 45.0% | |
CATGCATGTCCTTTGTGTTG+TGG | - | chr6_3:63722647-63722666 | Msa0956430:intron | 45.0% | |
AGATCAGTGTGCATACTGGT+AGG | - | chr6_3:63723384-63723403 | Msa0956430:intron | 45.0% | |
GATCAGTGTGCATACTGGTA+GGG | - | chr6_3:63723385-63723404 | Msa0956430:intron | 45.0% | |
TGCAGATCCAGTTGAGTTTG+AGG | - | chr6_3:63723603-63723622 | Msa0956430:CDS | 45.0% | |
CATGCAGATAATCTTGCCCT+TGG | + | chr6_3:63723636-63723655 | None:intergenic | 45.0% | |
CAAGGGCAAGATTATCTGCA+TGG | - | chr6_3:63723634-63723653 | Msa0956430:intron | 45.0% | |
TTCATGAATCTCAGGCTGAG+CGG | + | chr6_3:63723707-63723726 | None:intergenic | 45.0% | |
CTCAGCCTGAGATTCATGAA+TGG | - | chr6_3:63723707-63723726 | Msa0956430:intron | 45.0% | |
GCCAAATTGCATCTCTGAGT+TGG | - | chr6_3:63723831-63723850 | Msa0956430:intron | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | - | chr6_3:63723957-63723976 | Msa0956430:intron | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | - | chr6_3:63723957-63723976 | Msa0956430:intron | 45.0% | |
! | TCAATGGCACTGGAGAAAAG+GGG | - | chr6_3:63724122-63724141 | Msa0956430:CDS | 45.0% |
CAAGCACATCTGGTATAAGC+TGG | - | chr6_3:63724175-63724194 | Msa0956430:CDS | 45.0% | |
AATGCATGCCACATGACAAG+CGG | + | chr6_3:63724204-63724223 | None:intergenic | 45.0% | |
TTTGCGTCCATTTGTGTACC+CGG | + | chr6_3:63724461-63724480 | None:intergenic | 45.0% | |
ATGATATGAGCTCGGCACAA+TGG | + | chr6_3:63724558-63724577 | None:intergenic | 45.0% | |
TAGCATGCAGCTTCAAAGCA+AGG | + | chr6_3:63724627-63724646 | None:intergenic | 45.0% | |
GCTGCATGCTAATGTTCAGA+TGG | - | chr6_3:63724636-63724655 | Msa0956430:intron | 45.0% | |
CAAGACAAGATGGAGCTTCT+TGG | - | chr6_3:63725455-63725474 | Msa0956430:CDS | 45.0% | |
! | GGAGCTTCTTGGTGATAATC+AGG | - | chr6_3:63725466-63725485 | Msa0956430:CDS | 45.0% |
ATGGAGAGACCAATGTTGAC+AGG | - | chr6_3:63725489-63725508 | Msa0956430:CDS | 45.0% | |
! | TGCTCATCTGAAGCAGTTAC+GGG | + | chr6_3:63725533-63725552 | None:intergenic | 45.0% |
!! | CTGGGATATTTTTCGGAGAG+AGG | - | chr6_3:63725670-63725689 | Msa0956430:CDS | 45.0% |
AAGAGGCTTAAGGAGGAGTA+TGG | - | chr6_3:63725971-63725990 | Msa0956430:CDS | 45.0% | |
!! | TCCGTACGTTGTTTGGTTTG+TGG | - | chr6_3:63726013-63726032 | Msa0956430:CDS | 45.0% |
GACTTGTAGGAATTGAGCCT+TGG | - | chr6_3:63726082-63726101 | Msa0956430:CDS | 45.0% | |
AGCTTCTGCACAAAACTCCA+AGG | + | chr6_3:63726102-63726121 | None:intergenic | 45.0% | |
!! | TGGAGTTTTGTGCAGAAGCT+AGG | - | chr6_3:63726102-63726121 | Msa0956430:CDS | 45.0% |
!!! | GATGCTGTTTTCATTCCAGC+TGG | - | chr6_3:63726126-63726145 | Msa0956430:CDS | 45.0% |
!! | TTCAGATTCCTGACTTGGTG+GGG | + | chr6_3:63726156-63726175 | None:intergenic | 45.0% |
!! | CTTCAGATTCCTGACTTGGT+GGG | + | chr6_3:63726157-63726176 | None:intergenic | 45.0% |
! | CGTGATAATTGGTAGCCCAA+TGG | - | chr6_3:63726413-63726432 | Msa0956430:intron | 45.0% |
! | GATAATTGGTAGCCCAATGG+AGG | - | chr6_3:63726416-63726435 | Msa0956430:intron | 45.0% |
TTTGTTGCAGTCATGCACCA+AGG | - | chr6_3:63726540-63726559 | Msa0956430:intron | 45.0% | |
! | CGAGTGCTTGCATTTTACAG+AGG | - | chr6_3:63726597-63726616 | Msa0956430:intron | 45.0% |
CTGTTCCACAGAGGACAAAT+TGG | - | chr6_3:63726645-63726664 | Msa0956430:intron | 45.0% | |
TTCCACAGAGGACAAATTGG+AGG | - | chr6_3:63726648-63726667 | Msa0956430:intron | 45.0% | |
TACCTCCAATTTGTCCTCTG+TGG | + | chr6_3:63726653-63726672 | None:intergenic | 45.0% | |
GCTTGACCTACCAAAACAGT+TGG | - | chr6_3:63726810-63726829 | Msa0956430:intron | 45.0% | |
CAAAACAGTTGGGCCTGATT+GGG | - | chr6_3:63726821-63726840 | Msa0956430:intron | 45.0% | |
AAAACAGTTGGGCCTGATTG+GGG | - | chr6_3:63726822-63726841 | Msa0956430:intron | 45.0% | |
TTTACTGAAAGCCCCCAATC+AGG | + | chr6_3:63726837-63726856 | None:intergenic | 45.0% | |
AGCATGACAGTGCCAACAAT+TGG | + | chr6_3:63726865-63726884 | None:intergenic | 45.0% | |
!! | CTGCTTCTTTGGTAACGAAC+AGG | - | chr6_3:63727220-63727239 | Msa0956430:CDS | 45.0% |
GCAAGAAGAGAGAGTCCTTG+AGG | + | chr6_3:63722916-63722935 | None:intergenic | 50.0% | |
GGCAGTGTACGTGTCGTATT+CGG | - | chr6_3:63723134-63723153 | Msa0956430:CDS | 50.0% | |
GGGCAAGATTATCTGCATGG+TGG | - | chr6_3:63723637-63723656 | Msa0956430:intron | 50.0% | |
TCAAAATCTGGGTGGCATGC+CGG | - | chr6_3:63723730-63723749 | Msa0956430:intron | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | + | chr6_3:63723964-63723983 | None:intergenic | 50.0% | |
GGCTTAAAAACCACCTTCCC+TGG | + | chr6_3:63723973-63723992 | None:intergenic | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | + | chr6_3:63723964-63723983 | None:intergenic | 50.0% | |
TCACGAAAAACCACCTTCCC+TGG | + | chr6_3:63724027-63724046 | None:intergenic | 50.0% | |
ATCAGTCGTCTGAGAAGCTC+AGG | + | chr6_3:63724319-63724338 | None:intergenic | 50.0% | |
GACGCAAAGATAGGCTCGAT+TGG | - | chr6_3:63724473-63724492 | Msa0956430:intron | 50.0% | |
!! | GATTTTCTGAGGAGCTTGGG+CGG | - | chr6_3:63724683-63724702 | Msa0956430:intron | 50.0% |
!! | ATTTTCTGAGGAGCTTGGGC+GGG | - | chr6_3:63724684-63724703 | Msa0956430:intron | 50.0% |
! | CACGGATTCGAGTTCCACTT+TGG | + | chr6_3:63725393-63725412 | None:intergenic | 50.0% |
GCACCTTGAGCAAGACAAGA+TGG | - | chr6_3:63725445-63725464 | Msa0956430:CDS | 50.0% | |
GCTCCATCTTGTCTTGCTCA+AGG | + | chr6_3:63725451-63725470 | None:intergenic | 50.0% | |
GAAGCAGTTACGGGAGAAGA+CGG | + | chr6_3:63725524-63725543 | None:intergenic | 50.0% | |
!! | CCTTCAGATTCCTGACTTGG+TGG | + | chr6_3:63726158-63726177 | None:intergenic | 50.0% |
CCACCAAGTCAGGAATCTGA+AGG | - | chr6_3:63726155-63726174 | Msa0956430:CDS | 50.0% | |
! | AAGCACTCGCCAGCATTTTC+AGG | + | chr6_3:63726586-63726605 | None:intergenic | 50.0% |
!!! | TCAGGCCCAACTGTTTTGGT+AGG | + | chr6_3:63726819-63726838 | None:intergenic | 50.0% |
! | CCAATCAGGCCCAACTGTTT+TGG | + | chr6_3:63726823-63726842 | None:intergenic | 50.0% |
CCAAAACAGTTGGGCCTGAT+TGG | - | chr6_3:63726820-63726839 | Msa0956430:intron | 50.0% | |
AAACAGTTGGGCCTGATTGG+GGG | - | chr6_3:63726823-63726842 | Msa0956430:intron | 50.0% | |
GGTCAGACACTCCTCGGATT+AGG | - | chr6_3:63722972-63722991 | Msa0956430:intron | 55.0% | |
! | TCCTCGGATTAGGCGTGTCT+CGG | - | chr6_3:63722982-63723001 | Msa0956430:intron | 55.0% |
! | GATTAGGCGTGTCTCGGTGT+CGG | - | chr6_3:63722988-63723007 | Msa0956430:intron | 55.0% |
!!! | CGGTAGGCGTGTTTTGGTGT+CGG | - | chr6_3:63723014-63723033 | Msa0956430:intron | 55.0% |
!! | TGTCGGTGTCGTGTCAGTGT+CGG | + | chr6_3:63723053-63723072 | None:intergenic | 55.0% |
ACCGAATGATCCAGGGAAGG+TGG | - | chr6_3:63723960-63723979 | Msa0956430:intron | 55.0% | |
ACCGAATGATCCAGGGAAGG+TGG | - | chr6_3:63723960-63723979 | Msa0956430:intron | 55.0% | |
ATGAGCTCGGCACAATGGTG+TGG | + | chr6_3:63724553-63724572 | None:intergenic | 55.0% | |
CGGCAGGGATGATATGAGCT+CGG | + | chr6_3:63724566-63724585 | None:intergenic | 55.0% | |
!! | TTTTCTGAGGAGCTTGGGCG+GGG | - | chr6_3:63724685-63724704 | Msa0956430:intron | 55.0% |
ACATTCCTAAGGGAGGCGGT+CGG | - | chr6_3:63726335-63726354 | Msa0956430:intron | 55.0% | |
ACCGAGACACGCCTAATCCG+AGG | + | chr6_3:63722986-63723005 | None:intergenic | 60.0% | |
! | CGGACACGGTAGGCGTGTTT+TGG | - | chr6_3:63723008-63723027 | Msa0956430:intron | 60.0% |
! | TGTCGTGTCAGTGTCGGGCA+CGG | + | chr6_3:63723047-63723066 | None:intergenic | 60.0% |
!! | GTCGGTGTCGTGTCAGTGTC+GGG | + | chr6_3:63723052-63723071 | None:intergenic | 60.0% |
AAGCTCCCCACGACGAAGCT+CGG | + | chr6_3:63723575-63723594 | None:intergenic | 60.0% | |
CTTCGTCGTGGGGAGCTTCT+AGG | - | chr6_3:63723577-63723596 | Msa0956430:CDS | 60.0% | |
GCGGATGCTACCATCACTGC+CGG | + | chr6_3:63723752-63723771 | None:intergenic | 60.0% | |
GCTGGGAACCGCTTGTCATG+TGG | - | chr6_3:63724193-63724212 | Msa0956430:CDS | 60.0% | |
! | ACTTGGTGGGGACAACCAGC+TGG | + | chr6_3:63726144-63726163 | None:intergenic | 60.0% |
CTGGTTGTCCCCACCAAGTC+AGG | - | chr6_3:63726145-63726164 | Msa0956430:CDS | 60.0% | |
CATTCCTAAGGGAGGCGGTC+GGG | - | chr6_3:63726336-63726355 | Msa0956430:CDS | 60.0% | |
! | TTTTCCCGACCGCCTCCCTT+AGG | + | chr6_3:63726343-63726362 | None:intergenic | 60.0% |
AAGGGAGGCGGTCGGGAAAA+TGG | - | chr6_3:63726343-63726362 | Msa0956430:CDS | 60.0% | |
!! | GCGTGTCTCGGTGTCGGACA+CGG | - | chr6_3:63722994-63723013 | Msa0956430:intron | 65.0% |
!! | GTCTCGGTGTCGGACACGGT+AGG | - | chr6_3:63722998-63723017 | Msa0956430:intron | 65.0% |
CGGAGCAGCAGCGGAGACAA+AGG | + | chr6_3:63723555-63723574 | None:intergenic | 65.0% | |
GACGAAGCTCGGAGCAGCAG+CGG | + | chr6_3:63723564-63723583 | None:intergenic | 65.0% | |
TGCTGCTCCGAGCTTCGTCG+TGG | - | chr6_3:63723565-63723584 | Msa0956430:CDS | 65.0% | |
GCTGCTCCGAGCTTCGTCGT+GGG | - | chr6_3:63723566-63723585 | Msa0956430:CDS | 65.0% | |
CTGCTCCGAGCTTCGTCGTG+GGG | - | chr6_3:63723567-63723586 | Msa0956430:CDS | 65.0% | |
CGTCGTGGGGAGCTTCTAGG+TGG | - | chr6_3:63723580-63723599 | Msa0956430:CDS | 65.0% | |
GGGTGGCATGCCGGCAGTGA+TGG | - | chr6_3:63723739-63723758 | Msa0956430:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 63722180 | 63727557 | 63722180 | ID=Msa0956430;Name=Msa0956430 |
chr6_3 | mRNA | 63722180 | 63727557 | 63722180 | ID=Msa0956430-mRNA-1;Parent=Msa0956430;Name=Msa0956430-mRNA-1;_AED=0.18;_eAED=0.21;_QI=0|0|0|0.81|1|1|11|0|840 |
chr6_3 | exon | 63727186 | 63727557 | 63727186 | ID=Msa0956430-mRNA-1:exon:12182;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63726834 | 63726972 | 63726834 | ID=Msa0956430-mRNA-1:exon:12181;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63726336 | 63726402 | 63726336 | ID=Msa0956430-mRNA-1:exon:12180;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63725441 | 63726245 | 63725441 | ID=Msa0956430-mRNA-1:exon:12179;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63724990 | 63725307 | 63724990 | ID=Msa0956430-mRNA-1:exon:12178;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63723968 | 63724369 | 63723968 | ID=Msa0956430-mRNA-1:exon:12177;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63723745 | 63723817 | 63723745 | ID=Msa0956430-mRNA-1:exon:12176;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63723561 | 63723646 | 63723561 | ID=Msa0956430-mRNA-1:exon:12175;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63723068 | 63723187 | 63723068 | ID=Msa0956430-mRNA-1:exon:12174;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63722437 | 63722552 | 63722437 | ID=Msa0956430-mRNA-1:exon:12173;Parent=Msa0956430-mRNA-1 |
chr6_3 | exon | 63722180 | 63722204 | 63722180 | ID=Msa0956430-mRNA-1:exon:12172;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63727186 | 63727557 | 63727186 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63726834 | 63726972 | 63726834 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63726336 | 63726402 | 63726336 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63725441 | 63726245 | 63725441 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63724990 | 63725307 | 63724990 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63723968 | 63724369 | 63723968 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63723745 | 63723817 | 63723745 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63723561 | 63723646 | 63723561 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63723068 | 63723187 | 63723068 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63722437 | 63722552 | 63722437 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
chr6_3 | CDS | 63722180 | 63722204 | 63722180 | ID=Msa0956430-mRNA-1:cds;Parent=Msa0956430-mRNA-1 |
Gene Sequence |
Protein sequence |