Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956880 | sp|A2XE31|ORR21_ORYSI | 33.579 | 271 | 123 | 5 | 8 | 225 | 16 | 282 | 6.93e-37 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956880 | A0A396HLS9 | 67.619 | 420 | 65 | 7 | 54 | 408 | 6 | 419 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0956880 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956880 | MtrunA17_Chr6g0473731 | 67.619 | 420 | 65 | 7 | 54 | 408 | 6 | 419 | 0.0 | 521 |
| Msa0956880 | MtrunA17_Chr7g0223971 | 51.376 | 218 | 68 | 3 | 60 | 241 | 1 | 216 | 8.22e-61 | 205 |
| Msa0956880 | MtrunA17_Chr7g0223971 | 38.346 | 133 | 55 | 4 | 265 | 379 | 296 | 419 | 7.13e-12 | 67.0 |
| Msa0956880 | MtrunA17_Chr4g0067981 | 31.837 | 245 | 118 | 4 | 6 | 205 | 33 | 273 | 9.53e-33 | 130 |
| Msa0956880 | MtrunA17_Chr3g0123131 | 32.707 | 266 | 132 | 4 | 6 | 228 | 15 | 276 | 1.26e-32 | 129 |
| Msa0956880 | MtrunA17_Chr2g0294911 | 32.636 | 239 | 122 | 4 | 6 | 205 | 31 | 269 | 1.52e-32 | 129 |
| Msa0956880 | MtrunA17_Chr3g0137101 | 30.120 | 249 | 119 | 3 | 8 | 205 | 12 | 256 | 4.19e-31 | 125 |
| Msa0956880 | MtrunA17_Chr1g0149841 | 32.365 | 241 | 120 | 3 | 8 | 205 | 9 | 249 | 4.44e-31 | 124 |
| Msa0956880 | MtrunA17_Chr1g0161431 | 30.859 | 256 | 126 | 4 | 6 | 210 | 13 | 268 | 5.06e-31 | 125 |
| Msa0956880 | MtrunA17_Chr8g0376881 | 31.970 | 269 | 124 | 5 | 6 | 222 | 27 | 288 | 1.22e-30 | 123 |
| Msa0956880 | MtrunA17_Chr7g0275891 | 30.709 | 254 | 120 | 5 | 8 | 205 | 9 | 262 | 2.50e-27 | 111 |
| Msa0956880 | MtrunA17_Chr4g0074411 | 30.932 | 236 | 123 | 3 | 8 | 203 | 22 | 257 | 6.97e-27 | 113 |
| Msa0956880 | MtrunA17_Chr2g0304841 | 31.873 | 251 | 113 | 5 | 8 | 203 | 22 | 269 | 1.29e-26 | 112 |
| Msa0956880 | MtrunA17_Chr7g0275401 | 30.453 | 243 | 125 | 4 | 5 | 203 | 6 | 248 | 3.03e-26 | 107 |
| Msa0956880 | MtrunA17_Chr4g0074401 | 30.126 | 239 | 124 | 3 | 8 | 203 | 21 | 259 | 1.03e-25 | 109 |
| Msa0956880 | MtrunA17_Chr6g0471041 | 31.278 | 227 | 117 | 4 | 10 | 209 | 20 | 234 | 6.46e-25 | 105 |
| Msa0956880 | MtrunA17_Chr4g0009851 | 31.148 | 244 | 131 | 7 | 8 | 224 | 15 | 248 | 1.19e-24 | 103 |
| Msa0956880 | MtrunA17_Chr1g0149851 | 31.102 | 254 | 117 | 5 | 8 | 203 | 9 | 262 | 1.33e-24 | 105 |
| Msa0956880 | MtrunA17_Chr4g0009981 | 36.424 | 151 | 86 | 2 | 57 | 207 | 36 | 176 | 2.16e-24 | 101 |
| Msa0956880 | MtrunA17_Chr1g0149831 | 36.145 | 166 | 86 | 4 | 57 | 205 | 21 | 183 | 3.03e-23 | 97.4 |
| Msa0956880 | MtrunA17_Chr4g0074421 | 35.714 | 154 | 81 | 3 | 58 | 196 | 32 | 182 | 3.57e-22 | 93.6 |
| Msa0956880 | MtrunA17_Chr3g0134461 | 28.241 | 216 | 93 | 2 | 8 | 196 | 12 | 192 | 9.70e-22 | 92.4 |
| Msa0956880 | MtrunA17_Chr4g0009901 | 28.755 | 233 | 129 | 6 | 6 | 212 | 12 | 233 | 1.38e-21 | 94.0 |
| Msa0956880 | MtrunA17_Chr3g0134481 | 26.977 | 215 | 86 | 2 | 8 | 196 | 12 | 181 | 4.58e-18 | 82.0 |
| Msa0956880 | MtrunA17_Chr4g0031961 | 53.968 | 63 | 29 | 0 | 144 | 206 | 128 | 190 | 9.52e-18 | 83.6 |
| Msa0956880 | MtrunA17_Chr7g0255711 | 54.839 | 62 | 28 | 0 | 145 | 206 | 89 | 150 | 2.75e-17 | 82.0 |
| Msa0956880 | MtrunA17_Chr4g0009991 | 33.858 | 127 | 69 | 3 | 72 | 196 | 3 | 116 | 3.84e-14 | 68.9 |
| Msa0956880 | MtrunA17_Chr7g0223991 | 35.204 | 196 | 73 | 8 | 214 | 358 | 24 | 216 | 3.13e-13 | 68.9 |
| Msa0956880 | MtrunA17_Chr5g0400241 | 46.667 | 60 | 32 | 0 | 146 | 205 | 310 | 369 | 7.61e-12 | 67.0 |
| Msa0956880 | MtrunA17_Chr4g0040481 | 42.647 | 68 | 39 | 0 | 146 | 213 | 157 | 224 | 1.25e-11 | 66.2 |
| Msa0956880 | MtrunA17_Chr8g0391911 | 26.971 | 241 | 117 | 8 | 6 | 196 | 11 | 242 | 1.99e-11 | 63.9 |
| Msa0956880 | MtrunA17_Chr2g0324891 | 42.647 | 68 | 39 | 0 | 146 | 213 | 160 | 227 | 3.15e-11 | 64.7 |
| Msa0956880 | MtrunA17_Chr4g0054981 | 44.444 | 63 | 35 | 0 | 146 | 208 | 309 | 371 | 3.84e-11 | 65.1 |
| Msa0956880 | MtrunA17_Chr1g0198601 | 47.458 | 59 | 30 | 1 | 146 | 203 | 210 | 268 | 9.52e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956880 | AT3G16857.1 | 29.392 | 296 | 135 | 6 | 6 | 233 | 35 | 324 | 1.03e-31 | 127 |
| Msa0956880 | AT3G16857.2 | 29.392 | 296 | 135 | 6 | 6 | 233 | 35 | 324 | 1.40e-31 | 127 |
| Msa0956880 | AT2G01760.1 | 29.553 | 291 | 136 | 5 | 6 | 227 | 9 | 299 | 3.25e-29 | 117 |
| Msa0956880 | AT4G31920.1 | 32.068 | 237 | 122 | 3 | 8 | 211 | 17 | 247 | 6.46e-29 | 119 |
| Msa0956880 | AT5G58080.1 | 30.739 | 257 | 136 | 5 | 8 | 225 | 18 | 271 | 2.21e-28 | 118 |
| Msa0956880 | AT2G25180.1 | 34.034 | 238 | 116 | 4 | 8 | 205 | 17 | 253 | 2.54e-28 | 117 |
| Msa0956880 | AT5G07210.2 | 32.281 | 285 | 122 | 6 | 8 | 223 | 16 | 298 | 3.01e-28 | 117 |
| Msa0956880 | AT3G16857.3 | 31.050 | 219 | 103 | 5 | 57 | 233 | 42 | 254 | 1.27e-27 | 115 |
| Msa0956880 | AT5G07210.1 | 31.399 | 293 | 122 | 7 | 8 | 223 | 16 | 306 | 9.53e-26 | 110 |
| Msa0956880 | AT2G01760.3 | 35.465 | 172 | 88 | 3 | 57 | 205 | 22 | 193 | 2.43e-24 | 102 |
| Msa0956880 | AT5G49240.1 | 31.602 | 231 | 116 | 4 | 8 | 196 | 42 | 272 | 7.37e-24 | 100 |
| Msa0956880 | AT2G27070.1 | 36.842 | 209 | 88 | 6 | 57 | 223 | 95 | 301 | 8.80e-24 | 103 |
| Msa0956880 | AT2G01760.2 | 26.959 | 319 | 136 | 6 | 6 | 227 | 9 | 327 | 9.44e-24 | 102 |
| Msa0956880 | AT1G67710.1 | 31.008 | 258 | 126 | 6 | 7 | 214 | 10 | 265 | 1.16e-22 | 100 |
| Msa0956880 | AT1G67710.2 | 34.615 | 182 | 93 | 5 | 57 | 214 | 21 | 200 | 6.02e-19 | 89.0 |
| Msa0956880 | AT5G59570.2 | 35.606 | 132 | 75 | 3 | 106 | 229 | 92 | 221 | 9.92e-19 | 86.7 |
| Msa0956880 | AT5G59570.1 | 35.606 | 132 | 75 | 3 | 106 | 229 | 92 | 221 | 9.92e-19 | 86.7 |
| Msa0956880 | AT3G46640.3 | 48.837 | 86 | 40 | 2 | 144 | 229 | 141 | 222 | 1.88e-18 | 86.3 |
| Msa0956880 | AT3G46640.2 | 48.837 | 86 | 40 | 2 | 144 | 229 | 141 | 222 | 1.93e-18 | 86.3 |
| Msa0956880 | AT3G46640.1 | 48.837 | 86 | 40 | 2 | 144 | 229 | 141 | 222 | 1.93e-18 | 86.3 |
| Msa0956880 | AT3G10760.1 | 43.158 | 95 | 46 | 1 | 120 | 206 | 70 | 164 | 2.87e-18 | 85.9 |
| Msa0956880 | AT1G67710.3 | 33.516 | 182 | 95 | 5 | 57 | 214 | 12 | 191 | 3.46e-18 | 86.7 |
| Msa0956880 | AT5G05090.1 | 52.381 | 63 | 30 | 0 | 144 | 206 | 78 | 140 | 4.75e-17 | 81.3 |
| Msa0956880 | AT2G40970.1 | 53.226 | 62 | 29 | 0 | 145 | 206 | 103 | 164 | 4.95e-17 | 80.9 |
| Msa0956880 | AT3G62670.1 | 26.293 | 232 | 125 | 6 | 9 | 199 | 42 | 268 | 9.19e-17 | 82.4 |
| Msa0956880 | AT5G44190.2 | 47.143 | 70 | 37 | 0 | 144 | 213 | 144 | 213 | 3.63e-14 | 73.9 |
| Msa0956880 | AT5G44190.1 | 46.575 | 73 | 39 | 0 | 141 | 213 | 141 | 213 | 4.16e-14 | 73.9 |
| Msa0956880 | AT3G04030.2 | 44.615 | 65 | 32 | 1 | 140 | 200 | 34 | 98 | 2.49e-12 | 68.6 |
| Msa0956880 | AT5G18240.2 | 45.455 | 66 | 31 | 2 | 140 | 200 | 34 | 99 | 1.49e-11 | 66.2 |
| Msa0956880 | AT5G18240.3 | 45.455 | 66 | 31 | 2 | 140 | 200 | 34 | 99 | 1.49e-11 | 66.2 |
| Msa0956880 | AT5G18240.5 | 45.455 | 66 | 31 | 2 | 140 | 200 | 34 | 99 | 1.64e-11 | 65.9 |
| Msa0956880 | AT5G18240.1 | 45.455 | 66 | 31 | 2 | 140 | 200 | 34 | 99 | 1.73e-11 | 65.9 |
| Msa0956880 | AT5G18240.4 | 45.455 | 66 | 31 | 2 | 140 | 200 | 34 | 99 | 1.73e-11 | 65.9 |
| Msa0956880 | AT4G18020.3 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.14e-11 | 65.5 |
| Msa0956880 | AT4G18020.2 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.14e-11 | 65.5 |
| Msa0956880 | AT4G18020.1 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.14e-11 | 65.5 |
| Msa0956880 | AT4G18020.6 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.14e-11 | 65.5 |
| Msa0956880 | AT4G18020.9 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.14e-11 | 65.5 |
| Msa0956880 | AT4G18020.8 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT4G18020.11 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT4G18020.4 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT4G18020.5 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT4G18020.10 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT4G18020.7 | 46.667 | 60 | 32 | 0 | 149 | 208 | 298 | 357 | 3.29e-11 | 65.5 |
| Msa0956880 | AT2G20570.1 | 45.455 | 66 | 36 | 0 | 146 | 211 | 152 | 217 | 3.47e-11 | 65.1 |
| Msa0956880 | AT2G20570.2 | 48.333 | 60 | 31 | 0 | 152 | 211 | 174 | 233 | 7.40e-11 | 64.3 |
Find 67 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATATAGCTTTGGGTTTAA+TGG | 0.190557 | 6_3:+65665092 | Msa0956880:CDS |
| TCGTTCAATCATTTCAATTA+TGG | 0.195385 | 6_3:+65664975 | Msa0956880:CDS |
| TTAACAAGGAACTTAAAATT+TGG | 0.202387 | 6_3:+65664912 | Msa0956880:CDS |
| ATTTCATTGATGACAGAAAT+TGG | 0.248135 | 6_3:-65664681 | None:intergenic |
| CAGATCCAACATGCAAGTTT+TGG | 0.289471 | 6_3:+65661273 | Msa0956880:CDS |
| GTAGAAGCGCCATCATAAAA+TGG | 0.300930 | 6_3:-65664825 | None:intergenic |
| AAATGTATCCAGTCATTTAC+AGG | 0.301898 | 6_3:+65664047 | Msa0956880:CDS |
| CCATTAAACCCAAAGCTATA+TGG | 0.320064 | 6_3:-65665092 | None:intergenic |
| TTAAGAAACCAAGGCTTGTT+TGG | 0.322427 | 6_3:+65663719 | Msa0956880:CDS |
| GACCAAGATCAAGGGGAGTT+TGG | 0.325620 | 6_3:+65663691 | Msa0956880:CDS |
| CTGAAGTCTTCAGCACAAAA+TGG | 0.336425 | 6_3:-65663523 | None:intergenic |
| ATGTTATTCCATATAGCTTT+GGG | 0.337073 | 6_3:+65665084 | Msa0956880:CDS |
| TCAATTATGGTGTGAAGAAC+TGG | 0.359272 | 6_3:+65664988 | Msa0956880:CDS |
| AATGTTATTCCATATAGCTT+TGG | 0.374067 | 6_3:+65665083 | Msa0956880:CDS |
| GTAAATGTTTCTGAGAATAG+AGG | 0.388331 | 6_3:+65665116 | Msa0956880:CDS |
| GGACCATGATGACGAGTCTT+TGG | 0.388380 | 6_3:+65661300 | Msa0956880:CDS |
| CTGAAGACTTCAGAGACATT+TGG | 0.388892 | 6_3:+65663533 | Msa0956880:CDS |
| GGAACAGGAACTACGAATAA+AGG | 0.399758 | 6_3:+65665050 | Msa0956880:CDS |
| CTCCAAACTCCCCTTGATCT+TGG | 0.403396 | 6_3:-65663693 | None:intergenic |
| CAAAGCATGGTGAGCATCCT+TGG | 0.404636 | 6_3:-65662834 | None:intergenic |
| TTGTATGCTATTAGACAGAT+TGG | 0.429839 | 6_3:+65663766 | Msa0956880:CDS |
| CCGTCATATGGAGGAAGAAA+AGG | 0.455186 | 6_3:+65664855 | Msa0956880:CDS |
| CAAGGATGCTCACCATGCTT+TGG | 0.455806 | 6_3:+65662835 | Msa0956880:CDS |
| TGTTGTGCCAAAGAAAATCT+TGG | 0.455958 | 6_3:+65663993 | Msa0956880:CDS |
| TCTACCAGCTATCCGTCATA+TGG | 0.457430 | 6_3:+65664843 | Msa0956880:CDS |
| TATAGCAAGTGAAGAAGAAG+AGG | 0.460340 | 6_3:+65663606 | Msa0956880:intron |
| AAGTTCCTTGTTAAGAAACT+TGG | 0.471132 | 6_3:-65664903 | None:intergenic |
| AGATCAACAGAAGTGGGAAC+AGG | 0.481464 | 6_3:+65665035 | Msa0956880:CDS |
| TACCGACATCATAGTATAGT+TGG | 0.481804 | 6_3:+65664945 | Msa0956880:CDS |
| TGACGAGTCTTTGGCATCAC+TGG | 0.484509 | 6_3:+65661309 | Msa0956880:CDS |
| TGTGATGATGACCAAGATCA+AGG | 0.491694 | 6_3:+65663682 | Msa0956880:CDS |
| TTATTAGTCCAAACAAGCCT+TGG | 0.494508 | 6_3:-65663727 | None:intergenic |
| AATGACATGGAGATTATGTC+TGG | 0.501152 | 6_3:-65663469 | None:intergenic |
| GCTATTAGACAGATTGGAAT+GGG | 0.512204 | 6_3:+65663772 | Msa0956880:CDS |
| TAGAAGCGCCATCATAAAAT+GGG | 0.519791 | 6_3:-65664824 | None:intergenic |
| TCCTCCATATGACGGATAGC+TGG | 0.529760 | 6_3:-65664847 | None:intergenic |
| TTTAAGTTCAAAATTTGCAT+CGG | 0.531556 | 6_3:+65664653 | Msa0956880:CDS |
| TGAATGTTCCAAACCTAACA+AGG | 0.533568 | 6_3:+65664022 | Msa0956880:CDS |
| AGACATTTGGAAGTATGCAC+TGG | 0.537346 | 6_3:+65663546 | Msa0956880:CDS |
| TGGAGGAAGAAAAGGAATGA+TGG | 0.540522 | 6_3:+65664863 | Msa0956880:CDS |
| TGCTATTAGACAGATTGGAA+TGG | 0.548483 | 6_3:+65663771 | Msa0956880:CDS |
| ATGCCAAAGACTCGTCATCA+TGG | 0.549394 | 6_3:-65661303 | None:intergenic |
| TAAATGTTTCTGAGAATAGA+GGG | 0.551447 | 6_3:+65665117 | Msa0956880:CDS |
| GTGATGATGACCAAGATCAA+GGG | 0.559984 | 6_3:+65663683 | Msa0956880:CDS |
| ATCACTGGCTAATATACTCA+TGG | 0.566664 | 6_3:+65661324 | Msa0956880:CDS |
| CAAGAATAGATCAACAGAAG+TGG | 0.568819 | 6_3:+65665028 | Msa0956880:CDS |
| GTACAAGAGAAAGGAATGGA+AGG | 0.572179 | 6_3:+65664612 | Msa0956880:CDS |
| CAAGAGAAAGGAATGGAAGG+AGG | 0.573386 | 6_3:+65664615 | Msa0956880:CDS |
| AAGAATAGATCAACAGAAGT+GGG | 0.573718 | 6_3:+65665029 | Msa0956880:CDS |
| CACAACCAAAACTTGCATGT+TGG | 0.574671 | 6_3:-65661278 | None:intergenic |
| TGTCACCAAGTTTCTTAACA+AGG | 0.582278 | 6_3:+65664898 | Msa0956880:CDS |
| GATTCATCTGCATAAATCAA+AGG | 0.587541 | 6_3:+65665139 | Msa0956880:CDS |
| TTGGAGTTGTTAAGAAACCA+AGG | 0.591730 | 6_3:+65663710 | Msa0956880:CDS |
| AAATGTACAAGAGAAAGGAA+TGG | 0.601924 | 6_3:+65664608 | Msa0956880:CDS |
| CTCGAAGAGTGACCAAAGCA+TGG | 0.605583 | 6_3:-65662847 | None:intergenic |
| TGCTCCATGTTCTAATGACA+TGG | 0.612114 | 6_3:-65663482 | None:intergenic |
| GGTGTGAAGAACTGGAGCGT+TGG | 0.621741 | 6_3:+65664996 | Msa0956880:CDS |
| TTCCAACTATACTATGATGT+CGG | 0.631257 | 6_3:-65664947 | None:intergenic |
| ATCTCCATGTCATTAGAACA+TGG | 0.631773 | 6_3:+65663478 | Msa0956880:CDS |
| ACCAGCTATCCGTCATATGG+AGG | 0.633285 | 6_3:+65664846 | Msa0956880:CDS |
| TGATGATGACCAAGATCAAG+GGG | 0.634597 | 6_3:+65663684 | Msa0956880:CDS |
| TGGCTAATATACTCATGGCA+TGG | 0.635039 | 6_3:+65661329 | Msa0956880:CDS |
| GAATGTTCCAAACCTAACAA+GGG | 0.643998 | 6_3:+65664023 | Msa0956880:CDS |
| TAAGGCTGATTTCAACAATG+AGG | 0.645850 | 6_3:+65665190 | Msa0956880:CDS |
| CAGGAACTACGAATAAAGGA+AGG | 0.649263 | 6_3:+65665054 | Msa0956880:CDS |
| ATTAGACAGATTGGAATGGG+AGG | 0.653232 | 6_3:+65663775 | Msa0956880:CDS |
| CTCATGGCATGGCAATACAA+AGG | 0.657436 | 6_3:+65661340 | Msa0956880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTAACAAAACATTTTA+GGG | - | chr6_3:65662420-65662439 | None:intergenic | 10.0% |
| !!! | TATATTTAACAAAACATTTT+AGG | - | chr6_3:65662421-65662440 | None:intergenic | 10.0% |
| !! | AAAACCAAATAAAAAAAATT+AGG | - | chr6_3:65662796-65662815 | None:intergenic | 10.0% |
| !! | ATAAAAATAAAATAATTGCA+AGG | - | chr6_3:65663317-65663336 | None:intergenic | 10.0% |
| !!! | AATAAATAGTTTATTTTTCT+TGG | - | chr6_3:65663575-65663594 | None:intergenic | 10.0% |
| !!! | TATATAAAATGGAAAATTTT+AGG | - | chr6_3:65664267-65664286 | None:intergenic | 10.0% |
| !!! | ACATATATTCTAAAAATATT+TGG | - | chr6_3:65664523-65664542 | None:intergenic | 10.0% |
| !! | TTATATTTAATTAAGTAGTC+TGG | - | chr6_3:65662261-65662280 | None:intergenic | 15.0% |
| !! | AAAACAAAGTTTAATATCAT+TGG | + | chr6_3:65662442-65662461 | Msa0956880:intron | 15.0% |
| !!! | TTTTAACTTAAATTACTGAA+TGG | - | chr6_3:65662717-65662736 | None:intergenic | 15.0% |
| !!! | ATGACCTAATTTTTTTTATT+TGG | + | chr6_3:65662789-65662808 | Msa0956880:intron | 15.0% |
| !! | TGGATGAAATTTAATAAATA+AGG | + | chr6_3:65663153-65663172 | Msa0956880:intron | 15.0% |
| !! | GGATGAAATTTAATAAATAA+GGG | + | chr6_3:65663154-65663173 | Msa0956880:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | chr6_3:65663165-65663184 | Msa0956880:intron | 15.0% |
| !! | AAAAATAATAAATGTTGCAT+TGG | + | chr6_3:65663191-65663210 | Msa0956880:intron | 15.0% |
| !!! | ATTAGTCTTCATAAAAAAAA+AGG | - | chr6_3:65664148-65664167 | None:intergenic | 15.0% |
| !!! | ACTGTTTTAAATAATAAATG+AGG | - | chr6_3:65664352-65664371 | None:intergenic | 15.0% |
| !! | AAAAATGAAAAAATTAGAGT+AGG | - | chr6_3:65664497-65664516 | None:intergenic | 15.0% |
| !!! | TTTTTGAAGATTGAAAATCT+AGG | - | chr6_3:65661427-65661446 | None:intergenic | 20.0% |
| !! | ATTAAAATACCACAATTGAA+AGG | - | chr6_3:65661570-65661589 | None:intergenic | 20.0% |
| !!! | TACAAATACTTTGTTTGTAA+AGG | + | chr6_3:65661773-65661792 | Msa0956880:intron | 20.0% |
| !!! | AATCATTCTTTGTTTTTGAA+GGG | - | chr6_3:65661810-65661829 | None:intergenic | 20.0% |
| !!! | AAATCATTCTTTGTTTTTGA+AGG | - | chr6_3:65661811-65661830 | None:intergenic | 20.0% |
| !! | AAACCAATCCTTAAAATAAA+GGG | - | chr6_3:65661846-65661865 | None:intergenic | 20.0% |
| !! | TAAACCAATCCTTAAAATAA+AGG | - | chr6_3:65661847-65661866 | None:intergenic | 20.0% |
| !! | TTATATGTATGAGTGAAAAT+GGG | + | chr6_3:65662101-65662120 | Msa0956880:intron | 20.0% |
| !!! | TTTTCCATTTTAAATTGAGA+AGG | + | chr6_3:65662184-65662203 | Msa0956880:intron | 20.0% |
| !!! | TGGTATGTTAGTTTTTTTTT+AGG | + | chr6_3:65662462-65662481 | Msa0956880:intron | 20.0% |
| !!! | GGTATGTTAGTTTTTTTTTA+GGG | + | chr6_3:65662463-65662482 | Msa0956880:intron | 20.0% |
| !!! | GTATGTTAGTTTTTTTTTAG+GGG | + | chr6_3:65662464-65662483 | Msa0956880:intron | 20.0% |
| !!! | ATTATGAATAGACTTTTAAC+CGG | + | chr6_3:65662531-65662550 | Msa0956880:intron | 20.0% |
| !! | TTATATATTTCTTCCTTATC+AGG | - | chr6_3:65662638-65662657 | None:intergenic | 20.0% |
| !!! | ATTTTATGACAACATACTAT+AGG | - | chr6_3:65662663-65662682 | None:intergenic | 20.0% |
| !!! | TTTCATATATTTGGAATGAA+TGG | + | chr6_3:65662905-65662924 | Msa0956880:intron | 20.0% |
| !! | AAATGATATTTACCTATAAC+AGG | - | chr6_3:65662971-65662990 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTCAA+TGG | + | chr6_3:65663070-65663089 | Msa0956880:intron | 20.0% |
| !!! | TTAGTTAGCTTTCTATATAA+TGG | - | chr6_3:65663935-65663954 | None:intergenic | 20.0% |
| !!! | AGACTAATGAAATTTTTTGA+AGG | + | chr6_3:65664160-65664179 | Msa0956880:intron | 20.0% |
| !! | AGATATTCTAAATATTGTTG+AGG | + | chr6_3:65664184-65664203 | Msa0956880:intron | 20.0% |
| !! | GTTATGGTGTATATATAAAA+TGG | - | chr6_3:65664278-65664297 | None:intergenic | 20.0% |
| !!! | TTTAAGTTCAAAATTTGCAT+CGG | + | chr6_3:65664653-65664672 | Msa0956880:CDS | 20.0% |
| !! | TTAACAAGGAACTTAAAATT+TGG | + | chr6_3:65664912-65664931 | Msa0956880:CDS | 20.0% |
| ! | AAAGTAATTCAATCATGTGA+TGG | - | chr6_3:65661388-65661407 | None:intergenic | 25.0% |
| ! | AAACAGTAGAATACATTGTT+TGG | - | chr6_3:65661455-65661474 | None:intergenic | 25.0% |
| ! | ATTAATTATCAGAAGCCAAA+GGG | - | chr6_3:65661606-65661625 | None:intergenic | 25.0% |
| ! | AACCAATCCTTAAAATAAAG+GGG | - | chr6_3:65661845-65661864 | None:intergenic | 25.0% |
| !!! | ATTTTAAGGATTGGTTTATG+TGG | + | chr6_3:65661849-65661868 | Msa0956880:intron | 25.0% |
| ! | CTTATATGTATGAGTGAAAA+TGG | + | chr6_3:65662100-65662119 | Msa0956880:intron | 25.0% |
| !! | TTAGCCTTCTCAATTTAAAA+TGG | - | chr6_3:65662191-65662210 | None:intergenic | 25.0% |
| ! | GTTTATTTAGGTAAAATCTC+CGG | + | chr6_3:65662228-65662247 | Msa0956880:intron | 25.0% |
| ! | TGAATCAAATTAACCTGATA+AGG | + | chr6_3:65662622-65662641 | Msa0956880:intron | 25.0% |
| ! | AATATTAATGCACACTCAAT+AGG | + | chr6_3:65662680-65662699 | Msa0956880:intron | 25.0% |
| ! | ATCAGTGAGTTTCATATATT+TGG | + | chr6_3:65662896-65662915 | Msa0956880:intron | 25.0% |
| !!! | AGAGTATTTTTTAGTTGGAA+GGG | - | chr6_3:65662996-65663015 | None:intergenic | 25.0% |
| !!! | TAGAGAGAGTATTTTTTAGT+TGG | - | chr6_3:65663001-65663020 | None:intergenic | 25.0% |
| ! | CTCTAAATTATAGTCGTTTA+AGG | + | chr6_3:65663022-65663041 | Msa0956880:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | - | chr6_3:65663122-65663141 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr6_3:65663123-65663142 | None:intergenic | 25.0% |
| !! | CATCACTATTTGAAACAAAA+AGG | - | chr6_3:65663434-65663453 | None:intergenic | 25.0% |
| !! | ATTATCTCCAAGATTTTCTT+TGG | - | chr6_3:65664003-65664022 | None:intergenic | 25.0% |
| ! | AAAAAAAACCTGTAAATGAC+TGG | - | chr6_3:65664058-65664077 | None:intergenic | 25.0% |
| ! | TACAAAAATAAACGGATAAC+AGG | - | chr6_3:65664300-65664319 | None:intergenic | 25.0% |
| ! | GTATGCAAAGAATATTATGT+TGG | + | chr6_3:65664372-65664391 | Msa0956880:intron | 25.0% |
| !! | ATGAAATTGGTAACTGAATT+TGG | - | chr6_3:65664469-65664488 | None:intergenic | 25.0% |
| ! | AGAGTAGGAAAAAATGAAAT+TGG | - | chr6_3:65664482-65664501 | None:intergenic | 25.0% |
| !! | AATTTTGAACTTAAAGCTCT+CGG | - | chr6_3:65664648-65664667 | None:intergenic | 25.0% |
| !! | ATTTCATTGATGACAGAAAT+TGG | - | chr6_3:65664684-65664703 | None:intergenic | 25.0% |
| ! | TCGTTCAATCATTTCAATTA+TGG | + | chr6_3:65664975-65664994 | Msa0956880:CDS | 25.0% |
| ! | AATGTTATTCCATATAGCTT+TGG | + | chr6_3:65665083-65665102 | Msa0956880:CDS | 25.0% |
| ! | ATGTTATTCCATATAGCTTT+GGG | + | chr6_3:65665084-65665103 | Msa0956880:CDS | 25.0% |
| !! | TAAATGTTTCTGAGAATAGA+GGG | + | chr6_3:65665117-65665136 | Msa0956880:CDS | 25.0% |
| ! | AGATTTTCAATGCATACACA+AGG | - | chr6_3:65661488-65661507 | None:intergenic | 30.0% |
| ! | AAAGTTTTGCCTTTCAATTG+TGG | + | chr6_3:65661558-65661577 | Msa0956880:intron | 30.0% |
| ATTGTTAGATATCAACCCTT+TGG | + | chr6_3:65661588-65661607 | Msa0956880:intron | 30.0% | |
| GATTAATTATCAGAAGCCAA+AGG | - | chr6_3:65661607-65661626 | None:intergenic | 30.0% | |
| ! | ATCTTGGCTAAAGCAAATTT+TGG | - | chr6_3:65661666-65661685 | None:intergenic | 30.0% |
| ! | AATTTGCTTTAGCCAAGATT+TGG | + | chr6_3:65661667-65661686 | Msa0956880:intron | 30.0% |
| ACCAATCCTTAAAATAAAGG+GGG | - | chr6_3:65661844-65661863 | None:intergenic | 30.0% | |
| AGACAATCAAAAGGGAAAAA+AGG | - | chr6_3:65662067-65662086 | None:intergenic | 30.0% | |
| !! | AAGTGTTGAGACAATCAAAA+GGG | - | chr6_3:65662075-65662094 | None:intergenic | 30.0% |
| !! | AAAGTGTTGAGACAATCAAA+AGG | - | chr6_3:65662076-65662095 | None:intergenic | 30.0% |
| ! | TAATTAAGTAGTCTGGTTTG+TGG | - | chr6_3:65662254-65662273 | None:intergenic | 30.0% |
| !!! | TGTTAGTTTTTTTTTAGGGG+AGG | + | chr6_3:65662467-65662486 | Msa0956880:intron | 30.0% |
| !!! | GTTAGTTTTTTTTTAGGGGA+GGG | + | chr6_3:65662468-65662487 | Msa0956880:intron | 30.0% |
| !!! | TTAGTTTTTTTTTAGGGGAG+GGG | + | chr6_3:65662469-65662488 | Msa0956880:intron | 30.0% |
| ! | AGAATAAGTTGAGCAAAGTT+AGG | - | chr6_3:65662579-65662598 | None:intergenic | 30.0% |
| ! | TATTCTCAAACAGGAGTTTT+AGG | + | chr6_3:65662593-65662612 | Msa0956880:intron | 30.0% |
| !! | ACTCATCTTGAATTTGCTTT+TGG | - | chr6_3:65662940-65662959 | None:intergenic | 30.0% |
| !!! | GAGTATTTTTTAGTTGGAAG+GGG | - | chr6_3:65662995-65663014 | None:intergenic | 30.0% |
| !!! | GAGAGTATTTTTTAGTTGGA+AGG | - | chr6_3:65662997-65663016 | None:intergenic | 30.0% |
| CCCTTATTAATTGTAGTTAG+TGG | + | chr6_3:65663119-65663138 | Msa0956880:intron | 30.0% | |
| TTGTATGCTATTAGACAGAT+TGG | + | chr6_3:65663766-65663785 | Msa0956880:CDS | 30.0% | |
| AAATGTATCCAGTCATTTAC+AGG | + | chr6_3:65664047-65664066 | Msa0956880:CDS | 30.0% | |
| AATAAACGGATAACAGGTTA+TGG | - | chr6_3:65664294-65664313 | None:intergenic | 30.0% | |
| CTGAAAAATGTACAAGAGAA+AGG | + | chr6_3:65664603-65664622 | Msa0956880:CDS | 30.0% | |
| AAATGTACAAGAGAAAGGAA+TGG | + | chr6_3:65664608-65664627 | Msa0956880:CDS | 30.0% | |
| ! | TTTTCGCTTGAAAAAGTGAA+AGG | - | chr6_3:65664740-65664759 | None:intergenic | 30.0% |
| AAGTTCCTTGTTAAGAAACT+TGG | - | chr6_3:65664906-65664925 | None:intergenic | 30.0% | |
| TTCCAACTATACTATGATGT+CGG | - | chr6_3:65664950-65664969 | None:intergenic | 30.0% | |
| AAGAATAGATCAACAGAAGT+GGG | + | chr6_3:65665029-65665048 | Msa0956880:CDS | 30.0% | |
| ! | GTAAATGTTTCTGAGAATAG+AGG | + | chr6_3:65665116-65665135 | Msa0956880:CDS | 30.0% |
| GATTCATCTGCATAAATCAA+AGG | + | chr6_3:65665139-65665158 | Msa0956880:CDS | 30.0% | |
| !!! | GAATGCTACTTTTGTCAATA+AGG | + | chr6_3:65665172-65665191 | Msa0956880:CDS | 30.0% |
| ! | ATCACTGGCTAATATACTCA+TGG | + | chr6_3:65661324-65661343 | Msa0956880:CDS | 35.0% |
| AGACACTAGATTCCAAATCT+TGG | - | chr6_3:65661682-65661701 | None:intergenic | 35.0% | |
| !!! | TCCCCCTTTATTTTAAGGAT+TGG | + | chr6_3:65661840-65661859 | Msa0956880:intron | 35.0% |
| !!! | AGGATTGGTTTATGTGGTTT+TGG | + | chr6_3:65661855-65661874 | Msa0956880:intron | 35.0% |
| CTACATTGTAGGATTCTCAA+GGG | - | chr6_3:65662135-65662154 | None:intergenic | 35.0% | |
| !!! | TAGTTTTTTTTTAGGGGAGG+GGG | + | chr6_3:65662470-65662489 | Msa0956880:intron | 35.0% |
| ! | CTTTTAACCGGACTATACTT+AGG | + | chr6_3:65662543-65662562 | Msa0956880:intron | 35.0% |
| TGCTCAACTTATTCTCAAAC+AGG | + | chr6_3:65662584-65662603 | Msa0956880:intron | 35.0% | |
| GAGTTTCAACTACCTGTTAT+AGG | + | chr6_3:65662956-65662975 | Msa0956880:intron | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr6_3:65663133-65663152 | Msa0956880:intron | 35.0% | |
| AGACAATTATTGTGAGACGT+AGG | + | chr6_3:65663260-65663279 | Msa0956880:intron | 35.0% | |
| GACAATTATTGTGAGACGTA+GGG | + | chr6_3:65663261-65663280 | Msa0956880:intron | 35.0% | |
| AATGACATGGAGATTATGTC+TGG | - | chr6_3:65663472-65663491 | None:intergenic | 35.0% | |
| ATCTCCATGTCATTAGAACA+TGG | + | chr6_3:65663478-65663497 | Msa0956880:CDS | 35.0% | |
| TATAGCAAGTGAAGAAGAAG+AGG | + | chr6_3:65663606-65663625 | Msa0956880:intron | 35.0% | |
| TTGGAGTTGTTAAGAAACCA+AGG | + | chr6_3:65663710-65663729 | Msa0956880:CDS | 35.0% | |
| ! | TTAAGAAACCAAGGCTTGTT+TGG | + | chr6_3:65663719-65663738 | Msa0956880:CDS | 35.0% |
| TTATTAGTCCAAACAAGCCT+TGG | - | chr6_3:65663730-65663749 | None:intergenic | 35.0% | |
| TGCTATTAGACAGATTGGAA+TGG | + | chr6_3:65663771-65663790 | Msa0956880:CDS | 35.0% | |
| GCTATTAGACAGATTGGAAT+GGG | + | chr6_3:65663772-65663791 | Msa0956880:CDS | 35.0% | |
| TGTTGTGCCAAAGAAAATCT+TGG | + | chr6_3:65663993-65664012 | Msa0956880:CDS | 35.0% | |
| TGAATGTTCCAAACCTAACA+AGG | + | chr6_3:65664022-65664041 | Msa0956880:CDS | 35.0% | |
| GAATGTTCCAAACCTAACAA+GGG | + | chr6_3:65664023-65664042 | Msa0956880:CDS | 35.0% | |
| ! | ACATTTTCCCTTGTTAGGTT+TGG | - | chr6_3:65664033-65664052 | None:intergenic | 35.0% |
| ! | TGGATACATTTTCCCTTGTT+AGG | - | chr6_3:65664038-65664057 | None:intergenic | 35.0% |
| !! | GAATATTATGTTGGTTCGAG+TGG | + | chr6_3:65664381-65664400 | Msa0956880:intron | 35.0% |
| GCGAAAAACTCTTTCAATGA+TGG | + | chr6_3:65664753-65664772 | Msa0956880:CDS | 35.0% | |
| ! | TTTTCGCTTGAAAAGGTGAA+AGG | - | chr6_3:65664803-65664822 | None:intergenic | 35.0% |
| !! | AATGGGTTTTTCGCTTGAAA+AGG | - | chr6_3:65664810-65664829 | None:intergenic | 35.0% |
| ! | GCGAAAAACCCATTTTATGA+TGG | + | chr6_3:65664816-65664835 | Msa0956880:CDS | 35.0% |
| !! | TAGAAGCGCCATCATAAAAT+GGG | - | chr6_3:65664827-65664846 | None:intergenic | 35.0% |
| TGTCACCAAGTTTCTTAACA+AGG | + | chr6_3:65664898-65664917 | Msa0956880:CDS | 35.0% | |
| TACCGACATCATAGTATAGT+TGG | + | chr6_3:65664945-65664964 | Msa0956880:CDS | 35.0% | |
| TCAATTATGGTGTGAAGAAC+TGG | + | chr6_3:65664988-65665007 | Msa0956880:CDS | 35.0% | |
| CAAGAATAGATCAACAGAAG+TGG | + | chr6_3:65665028-65665047 | Msa0956880:CDS | 35.0% | |
| CCATTAAACCCAAAGCTATA+TGG | - | chr6_3:65665095-65665114 | None:intergenic | 35.0% | |
| !! | CCATATAGCTTTGGGTTTAA+TGG | + | chr6_3:65665092-65665111 | Msa0956880:CDS | 35.0% |
| ! | TAAGGCTGATTTCAACAATG+AGG | + | chr6_3:65665190-65665209 | Msa0956880:CDS | 35.0% |
| ! | CAGATCCAACATGCAAGTTT+TGG | + | chr6_3:65661273-65661292 | Msa0956880:CDS | 40.0% |
| CACAACCAAAACTTGCATGT+TGG | - | chr6_3:65661281-65661300 | None:intergenic | 40.0% | |
| !!! | CAACATGCAAGTTTTGGTTG+TGG | + | chr6_3:65661279-65661298 | Msa0956880:CDS | 40.0% |
| TGGCTAATATACTCATGGCA+TGG | + | chr6_3:65661329-65661348 | Msa0956880:CDS | 40.0% | |
| TAATCCAGAATCTAGCTGAG+AGG | + | chr6_3:65661622-65661641 | Msa0956880:intron | 40.0% | |
| !!! | TGCGATCCCCCTTTATTTTA+AGG | + | chr6_3:65661835-65661854 | Msa0956880:intron | 40.0% |
| TGACACAATTCAAAGACTCG+AGG | - | chr6_3:65662004-65662023 | None:intergenic | 40.0% | |
| GCTACATTGTAGGATTCTCA+AGG | - | chr6_3:65662136-65662155 | None:intergenic | 40.0% | |
| AGAATCCTACAATGTAGCCT+AGG | + | chr6_3:65662138-65662157 | Msa0956880:intron | 40.0% | |
| AACTTGATCTGATCTGACCT+AGG | - | chr6_3:65662158-65662177 | None:intergenic | 40.0% | |
| !!! | AGTTTTTTTTTAGGGGAGGG+GGG | + | chr6_3:65662471-65662490 | Msa0956880:intron | 40.0% |
| CACAATGCCTAAGTATAGTC+CGG | - | chr6_3:65662553-65662572 | None:intergenic | 40.0% | |
| ! | ATTTTCAGTTCGAACTGCCA+AGG | + | chr6_3:65662817-65662836 | Msa0956880:intron | 40.0% |
| TGCTCCATGTTCTAATGACA+TGG | - | chr6_3:65663485-65663504 | None:intergenic | 40.0% | |
| CTGAAGTCTTCAGCACAAAA+TGG | - | chr6_3:65663526-65663545 | None:intergenic | 40.0% | |
| CTGAAGACTTCAGAGACATT+TGG | + | chr6_3:65663533-65663552 | Msa0956880:CDS | 40.0% | |
| ! | AGACATTTGGAAGTATGCAC+TGG | + | chr6_3:65663546-65663565 | Msa0956880:CDS | 40.0% |
| ! | TGTGATGATGACCAAGATCA+AGG | + | chr6_3:65663682-65663701 | Msa0956880:CDS | 40.0% |
| ! | GTGATGATGACCAAGATCAA+GGG | + | chr6_3:65663683-65663702 | Msa0956880:CDS | 40.0% |
| ! | TGATGATGACCAAGATCAAG+GGG | + | chr6_3:65663684-65663703 | Msa0956880:CDS | 40.0% |
| ATTAGACAGATTGGAATGGG+AGG | + | chr6_3:65663775-65663794 | Msa0956880:CDS | 40.0% | |
| GTACAAGAGAAAGGAATGGA+AGG | + | chr6_3:65664612-65664631 | Msa0956880:CDS | 40.0% | |
| !! | GTAGAAGCGCCATCATAAAA+TGG | - | chr6_3:65664828-65664847 | None:intergenic | 40.0% |
| ! | CCTTTTCTTCCTCCATATGA+CGG | - | chr6_3:65664858-65664877 | None:intergenic | 40.0% |
| TGGAGGAAGAAAAGGAATGA+TGG | + | chr6_3:65664863-65664882 | Msa0956880:CDS | 40.0% | |
| GGAACAGGAACTACGAATAA+AGG | + | chr6_3:65665050-65665069 | Msa0956880:CDS | 40.0% | |
| CAGGAACTACGAATAAAGGA+AGG | + | chr6_3:65665054-65665073 | Msa0956880:CDS | 40.0% | |
| ATGCCAAAGACTCGTCATCA+TGG | - | chr6_3:65661306-65661325 | None:intergenic | 45.0% | |
| CTCATGGCATGGCAATACAA+AGG | + | chr6_3:65661340-65661359 | Msa0956880:CDS | 45.0% | |
| TCTGACCTAGGCTACATTGT+AGG | - | chr6_3:65662146-65662165 | None:intergenic | 45.0% | |
| ! | TAAGTAGTCTGGTTTGTGGC+CGG | - | chr6_3:65662250-65662269 | None:intergenic | 45.0% |
| !!! | GTTTTTTTTTAGGGGAGGGG+GGG | + | chr6_3:65662472-65662491 | Msa0956880:intron | 45.0% |
| !! | TATGTTGGTTCGAGTGGAAC+TGG | + | chr6_3:65664387-65664406 | Msa0956880:intron | 45.0% |
| CAAGAGAAAGGAATGGAAGG+AGG | + | chr6_3:65664615-65664634 | Msa0956880:CDS | 45.0% | |
| TCTACCAGCTATCCGTCATA+TGG | + | chr6_3:65664843-65664862 | Msa0956880:CDS | 45.0% | |
| CCGTCATATGGAGGAAGAAA+AGG | + | chr6_3:65664855-65664874 | Msa0956880:CDS | 45.0% | |
| AGATCAACAGAAGTGGGAAC+AGG | + | chr6_3:65665035-65665054 | Msa0956880:CDS | 45.0% | |
| !!! | TTTTTTTTTTAAGTTTATTT+AGG | + | chr6_3:65662216-65662235 | Msa0956880:intron | 5.0% |
| !!! | TAAAATATTCAATATTTTAA+TGG | + | chr6_3:65662732-65662751 | Msa0956880:intron | 5.0% |
| !! | ATATATTATACAAAAATAAA+CGG | - | chr6_3:65664308-65664327 | None:intergenic | 5.0% |
| ! | GGACCATGATGACGAGTCTT+TGG | + | chr6_3:65661300-65661319 | Msa0956880:CDS | 50.0% |
| TGACGAGTCTTTGGCATCAC+TGG | + | chr6_3:65661309-65661328 | Msa0956880:CDS | 50.0% | |
| CCAACCTCTCAGCTAGATTC+TGG | - | chr6_3:65661629-65661648 | None:intergenic | 50.0% | |
| CCAGAATCTAGCTGAGAGGT+TGG | + | chr6_3:65661626-65661645 | Msa0956880:intron | 50.0% | |
| CAAAGCATGGTGAGCATCCT+TGG | - | chr6_3:65662837-65662856 | None:intergenic | 50.0% | |
| CAAGGATGCTCACCATGCTT+TGG | + | chr6_3:65662835-65662854 | Msa0956880:CDS | 50.0% | |
| CTCGAAGAGTGACCAAAGCA+TGG | - | chr6_3:65662850-65662869 | None:intergenic | 50.0% | |
| GACCAAGATCAAGGGGAGTT+TGG | + | chr6_3:65663691-65663710 | Msa0956880:CDS | 50.0% | |
| CTCCAAACTCCCCTTGATCT+TGG | - | chr6_3:65663696-65663715 | None:intergenic | 50.0% | |
| GACAGATTGGAATGGGAGGT+AGG | + | chr6_3:65663779-65663798 | Msa0956880:intron | 50.0% | |
| ACCAGCTATCCGTCATATGG+AGG | + | chr6_3:65664846-65664865 | Msa0956880:CDS | 50.0% | |
| !! | TCCTCCATATGACGGATAGC+TGG | - | chr6_3:65664850-65664869 | None:intergenic | 50.0% |
| GGTGTGAAGAACTGGAGCGT+TGG | + | chr6_3:65664996-65665015 | Msa0956880:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 65661262 | 65665259 | 65661262 | ID=Msa0956880;Name=Msa0956880 |
| chr6_3 | mRNA | 65661262 | 65665259 | 65661262 | ID=Msa0956880-mRNA-1;Parent=Msa0956880;Name=Msa0956880-mRNA-1;_AED=0.11;_eAED=0.13;_QI=0|0|0|1|0.8|0.66|6|0|419 |
| chr6_3 | exon | 65661262 | 65661361 | 65661262 | ID=Msa0956880-mRNA-1:exon:12372;Parent=Msa0956880-mRNA-1 |
| chr6_3 | exon | 65662825 | 65662899 | 65662825 | ID=Msa0956880-mRNA-1:exon:12373;Parent=Msa0956880-mRNA-1 |
| chr6_3 | exon | 65663449 | 65663598 | 65663449 | ID=Msa0956880-mRNA-1:exon:12374;Parent=Msa0956880-mRNA-1 |
| chr6_3 | exon | 65663611 | 65663796 | 65663611 | ID=Msa0956880-mRNA-1:exon:12375;Parent=Msa0956880-mRNA-1 |
| chr6_3 | exon | 65663992 | 65664068 | 65663992 | ID=Msa0956880-mRNA-1:exon:12376;Parent=Msa0956880-mRNA-1 |
| chr6_3 | exon | 65664588 | 65665259 | 65664588 | ID=Msa0956880-mRNA-1:exon:12377;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65661262 | 65661361 | 65661262 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65662825 | 65662899 | 65662825 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65663449 | 65663598 | 65663449 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65663611 | 65663796 | 65663611 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65663992 | 65664068 | 65663992 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| chr6_3 | CDS | 65664588 | 65665259 | 65664588 | ID=Msa0956880-mRNA-1:cds;Parent=Msa0956880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
