Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961390 | KEH16067.1 | 75.000 | 204 | 11 | 2 | 102 | 265 | 83 | 286 | 1.88e-98 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961390 | A0A072TFB0 | 75.000 | 204 | 11 | 2 | 102 | 265 | 83 | 286 | 8.96e-99 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961390 | MtrunA17_Chr6g0480541 | 79.255 | 188 | 2 | 1 | 115 | 265 | 1015 | 1202 | 3.18e-96 | 306 |
| Msa0961390 | MtrunA17_Chr6g0480541 | 93.750 | 64 | 4 | 0 | 54 | 117 | 363 | 426 | 5.26e-32 | 124 |
| Msa0961390 | MtrunA17_Chr6g0480541 | 87.234 | 47 | 5 | 1 | 1 | 47 | 239 | 284 | 1.05e-16 | 79.7 |
| Msa0961390 | MtrunA17_Chr5g0437131 | 50.532 | 188 | 56 | 1 | 115 | 265 | 520 | 707 | 1.48e-61 | 206 |
| Msa0961390 | MtrunA17_Chr6g0480291 | 92.308 | 78 | 5 | 1 | 188 | 265 | 1 | 77 | 2.11e-45 | 147 |
| Msa0961390 | MtrunA17_Chr6g0480471 | 96.078 | 51 | 2 | 0 | 163 | 213 | 25 | 75 | 6.74e-30 | 107 |
| Msa0961390 | MtrunA17_Chr6g0480481 | 97.959 | 49 | 1 | 0 | 115 | 163 | 115 | 163 | 6.62e-28 | 106 |
| Msa0961390 | MtrunA17_Chr6g0480331 | 92.683 | 41 | 3 | 0 | 210 | 250 | 2 | 42 | 3.13e-21 | 84.0 |
| Msa0961390 | MtrunA17_Chr6g0480191 | 97.143 | 35 | 1 | 0 | 231 | 265 | 1 | 35 | 3.65e-18 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961390 | AT1G73450.1 | 69.149 | 188 | 21 | 1 | 115 | 265 | 958 | 1145 | 2.30e-85 | 276 |
| Msa0961390 | AT1G73450.1 | 65.517 | 58 | 20 | 0 | 54 | 111 | 322 | 379 | 1.78e-17 | 82.4 |
| Msa0961390 | AT1G73460.2 | 69.149 | 188 | 21 | 1 | 115 | 265 | 975 | 1162 | 3.85e-85 | 276 |
| Msa0961390 | AT1G73460.2 | 59.677 | 62 | 25 | 0 | 54 | 115 | 323 | 384 | 4.79e-17 | 81.3 |
| Msa0961390 | AT1G73460.1 | 69.149 | 188 | 21 | 1 | 115 | 265 | 975 | 1162 | 3.85e-85 | 276 |
| Msa0961390 | AT1G73460.1 | 59.677 | 62 | 25 | 0 | 54 | 115 | 323 | 384 | 4.79e-17 | 81.3 |
| Msa0961390 | AT3G17750.1 | 70.213 | 188 | 19 | 1 | 115 | 265 | 944 | 1131 | 3.43e-83 | 270 |
| Msa0961390 | AT3G17750.1 | 55.738 | 61 | 27 | 0 | 55 | 115 | 326 | 386 | 1.84e-13 | 70.5 |
| Msa0961390 | AT2G40120.1 | 47.059 | 187 | 62 | 1 | 115 | 264 | 378 | 564 | 4.56e-54 | 184 |
| Msa0961390 | AT4G03175.1 | 53.261 | 92 | 43 | 0 | 173 | 264 | 2 | 93 | 2.01e-32 | 115 |
Find 59 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGACAGCTCTTTACTTAT+TGG | 0.146422 | 6_3:-82990311 | Msa0961390:CDS |
| TTTACTTATTGGATCATATC+TGG | 0.234260 | 6_3:-82990300 | Msa0961390:CDS |
| CTTGAAGCCGGAGAATATTT+TGG | 0.240496 | 6_3:-82988835 | Msa0961390:CDS |
| ATAAGCCGTTGACTATTAAT+TGG | 0.257446 | 6_3:-82990379 | Msa0961390:CDS |
| TGCCTCAAAGATGTCTTCTT+TGG | 0.277464 | 6_3:+82986860 | None:intergenic |
| GATGCAGAAGGTCGCTTCTT+CGG | 0.294316 | 6_3:+82986776 | None:intergenic |
| ATGCAGAAGGTCGCTTCTTC+GGG | 0.331076 | 6_3:+82986777 | None:intergenic |
| CTTCTGATGTATGGAAAGAT+TGG | 0.347745 | 6_3:-82990593 | Msa0961390:CDS |
| AAGATGTCTTCTTTGGAATC+AGG | 0.354438 | 6_3:+82986867 | None:intergenic |
| GCTAGCATACTTTGACCAAT+TGG | 0.379617 | 6_3:+82987376 | None:intergenic |
| CAAATTCATCTTCTGATGTA+TGG | 0.382402 | 6_3:-82990602 | Msa0961390:CDS |
| TCATATCTGGATGTACCTAT+TGG | 0.385509 | 6_3:-82990287 | Msa0961390:CDS |
| AGATTGGGGAAGCCAGATAT+TGG | 0.390908 | 6_3:-82990577 | Msa0961390:intron |
| CGATGGATTGGCTGCTAAGC+TGG | 0.396555 | 6_3:-82990339 | Msa0961390:CDS |
| GCCCTCGCATAACCAATATC+TGG | 0.409108 | 6_3:+82990565 | None:intergenic |
| ACCCTTGCAAGTAATGTTGC+CGG | 0.412272 | 6_3:+82987415 | None:intergenic |
| TTCTGATGTATGGAAAGATT+GGG | 0.413846 | 6_3:-82990592 | Msa0961390:CDS |
| CATTACTTGCAAGGGTGATC+GGG | 0.424414 | 6_3:-82987408 | Msa0961390:CDS |
| CTTCAATATTTACATAACCT+TGG | 0.431917 | 6_3:-82988873 | Msa0961390:CDS |
| GCAAGGGTGATCGGGATTAT+CGG | 0.436470 | 6_3:-82987400 | Msa0961390:CDS |
| TTGATATGCAGGAAAGCAAC+AGG | 0.462723 | 6_3:-82986898 | Msa0961390:intron |
| ATCGGGATTATCGGTCCAAT+TGG | 0.477775 | 6_3:-82987391 | Msa0961390:CDS |
| ACATTACTTGCAAGGGTGAT+CGG | 0.483894 | 6_3:-82987409 | Msa0961390:CDS |
| AGCGAGAAGTTTGAATCCGA+TGG | 0.484971 | 6_3:-82990356 | Msa0961390:CDS |
| GAAGTTTGAATCCGATGGAT+TGG | 0.487840 | 6_3:-82990351 | Msa0961390:CDS |
| TATGCTTTATGAGAGGAATC+AGG | 0.494533 | 6_3:-82987314 | Msa0961390:intron |
| GGTCAAAGTATGCTAGCAAA+AGG | 0.496032 | 6_3:-82987370 | Msa0961390:CDS |
| TTCCAAAGAAGACATCTTTG+AGG | 0.496816 | 6_3:-82986862 | Msa0961390:CDS |
| CAACAAAGTCAATGAAGCCT+TGG | 0.499867 | 6_3:+82986819 | None:intergenic |
| CCCTTGCAAGTAATGTTGCC+GGG | 0.500738 | 6_3:+82987416 | None:intergenic |
| TTATGCAAAACAAAGAATCA+AGG | 0.503117 | 6_3:-82990716 | Msa0961390:CDS |
| GAGGTGAAGGTCGTTGATCT+TGG | 0.505110 | 6_3:-82988792 | Msa0961390:CDS |
| CTGAAGCTCTAAAGCACCCC+TGG | 0.508338 | 6_3:-82986754 | Msa0961390:CDS |
| CTTATTTCAAAATGATTCCC+CGG | 0.520946 | 6_3:-82987434 | Msa0961390:CDS |
| CCCCGGCAACATTACTTGCA+AGG | 0.528874 | 6_3:-82987417 | Msa0961390:CDS |
| CCCGGCAACATTACTTGCAA+GGG | 0.532375 | 6_3:-82987416 | Msa0961390:CDS |
| AGCAGAAGGAAGAGTATCAA+AGG | 0.545097 | 6_3:-82990430 | Msa0961390:CDS |
| TTTGAGGCATAGATTACCGA+TGG | 0.557764 | 6_3:-82986846 | Msa0961390:CDS |
| AAGAATCAAGGGAAATTGAT+CGG | 0.562657 | 6_3:-82990704 | Msa0961390:CDS |
| TCGCTCCAATTAATAGTCAA+CGG | 0.569420 | 6_3:+82990374 | None:intergenic |
| CTTTGTTGCTCATTTGCTCG+AGG | 0.575791 | 6_3:-82986804 | Msa0961390:CDS |
| CAGCTTAGCAGCCAATCCAT+CGG | 0.580901 | 6_3:+82990340 | None:intergenic |
| TATGCAAAACAAAGAATCAA+GGG | 0.582995 | 6_3:-82990715 | Msa0961390:CDS |
| AGTCACAATGTATTAGTCCA+AGG | 0.583347 | 6_3:+82988856 | None:intergenic |
| AATACATTGTGACTTGAAGC+CGG | 0.584972 | 6_3:-82988847 | Msa0961390:CDS |
| AAGTATGCTAGCAAAAGGAC+GGG | 0.589744 | 6_3:-82987365 | Msa0961390:CDS |
| AAAGTATGCTAGCAAAAGGA+CGG | 0.592834 | 6_3:-82987366 | Msa0961390:CDS |
| TTGAGGCATAGATTACCGAT+GGG | 0.601000 | 6_3:-82986845 | Msa0961390:CDS |
| CTATAGCCGATGTGAGGTGA+AGG | 0.619012 | 6_3:-82988805 | Msa0961390:CDS |
| AAAATCATATGCTTTATGAG+AGG | 0.623112 | 6_3:-82987321 | Msa0961390:CDS |
| TTTAGAGCTTCAGATGCAGA+AGG | 0.638379 | 6_3:+82986764 | None:intergenic |
| TCTGATGTATGGAAAGATTG+GGG | 0.642236 | 6_3:-82990591 | Msa0961390:CDS |
| CCTTGCAAGTAATGTTGCCG+GGG | 0.647394 | 6_3:+82987417 | None:intergenic |
| CTGGACGAACATATGAGCAA+AGG | 0.658269 | 6_3:+82988745 | None:intergenic |
| TAAAAGCTATAGCCGATGTG+AGG | 0.677079 | 6_3:-82988811 | Msa0961390:CDS |
| TTCATCATTTAAAGAGAACG+TGG | 0.680148 | 6_3:-82990661 | Msa0961390:CDS |
| CAACGACCTTCACCTCACAT+CGG | 0.687109 | 6_3:+82988799 | None:intergenic |
| TGAGGCATAGATTACCGATG+GGG | 0.713357 | 6_3:-82986844 | Msa0961390:CDS |
| GAGGCATAGATTACCGATGG+GGG | 0.717861 | 6_3:-82986843 | Msa0961390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTCAAAATTGAATTA+AGG | - | chr6_3:82988290-82988309 | Msa0961390:intron | 10.0% |
| !! | AAAAGATTACAAATAATCTT+TGG | + | chr6_3:82987926-82987945 | None:intergenic | 15.0% |
| !!! | TATTTGTAATCTTTTTTATC+AGG | - | chr6_3:82987931-82987950 | Msa0961390:intron | 15.0% |
| !!! | TGATTTTTTAGATTGATTTA+AGG | - | chr6_3:82988326-82988345 | Msa0961390:intron | 15.0% |
| !! | ATTTATAATACTAAATCCTA+TGG | - | chr6_3:82988958-82988977 | Msa0961390:intron | 15.0% |
| !! | CTTAAGTTTGAAAATATTTA+TGG | + | chr6_3:82989190-82989209 | None:intergenic | 15.0% |
| !!! | TAGGATTATTATACTTTTTT+GGG | - | chr6_3:82989872-82989891 | Msa0961390:intron | 15.0% |
| !!! | ATACAATCTATTGATAATAT+GGG | + | chr6_3:82990473-82990492 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTCTTGTCCAAT+AGG | + | chr6_3:82987190-82987209 | None:intergenic | 20.0% |
| !! | AATTATTAAAATACCTTTCG+AGG | - | chr6_3:82987241-82987260 | Msa0961390:intron | 20.0% |
| !!! | AACAATGTGTTACTTTTTTA+TGG | - | chr6_3:82987365-82987384 | Msa0961390:CDS | 20.0% |
| !!! | ATATTTTAAGAGATGAACAT+TGG | + | chr6_3:82987654-82987673 | None:intergenic | 20.0% |
| !! | GAAAAAATTTCACTTTACTT+TGG | - | chr6_3:82987682-82987701 | Msa0961390:intron | 20.0% |
| !! | TATTTCTTAGTTCATAAACA+AGG | - | chr6_3:82987799-82987818 | Msa0961390:intron | 20.0% |
| !! | TTCAAAATTGAATTAAGGTT+TGG | - | chr6_3:82988295-82988314 | Msa0961390:intron | 20.0% |
| !! | TTAGATTAGATCAAATTTGA+AGG | - | chr6_3:82988383-82988402 | Msa0961390:intron | 20.0% |
| !! | TAGATTAGATCAAATTTGAA+GGG | - | chr6_3:82988384-82988403 | Msa0961390:intron | 20.0% |
| !! | TTAGTATTCTCTTTATATAC+AGG | - | chr6_3:82988471-82988490 | Msa0961390:intron | 20.0% |
| !! | ATATCAATCTGTTAGTAATA+GGG | + | chr6_3:82989088-82989107 | None:intergenic | 20.0% |
| !! | ATACTTTGTCAAGTTATTTA+AGG | + | chr6_3:82989777-82989796 | None:intergenic | 20.0% |
| !!! | GTAGGATTATTATACTTTTT+TGG | - | chr6_3:82989871-82989890 | Msa0961390:intron | 20.0% |
| !! | ATAGGGAAAGAAAAATTTAT+GGG | + | chr6_3:82989973-82989992 | None:intergenic | 20.0% |
| !! | AATAGGGAAAGAAAAATTTA+TGG | + | chr6_3:82989974-82989993 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTGAAGTACTTAT+AGG | + | chr6_3:82990123-82990142 | None:intergenic | 20.0% |
| !!! | CATACAATCTATTGATAATA+TGG | + | chr6_3:82990474-82990493 | None:intergenic | 20.0% |
| ! | AAGATCTGAACAAATAACAT+CGG | - | chr6_3:82986977-82986996 | Msa0961390:intron | 25.0% |
| !! | ATTAAATTTTCCTCTTGCAT+TGG | - | chr6_3:82987003-82987022 | Msa0961390:intron | 25.0% |
| ! | TTTACTTATTGGATCATATC+TGG | - | chr6_3:82987159-82987178 | Msa0961390:intron | 25.0% |
| !! | TTTTAATCTTCCGATTCTTA+GGG | - | chr6_3:82987388-82987407 | Msa0961390:CDS | 25.0% |
| ! | CACATTTAAGAGATGAAAAT+TGG | + | chr6_3:82987590-82987609 | None:intergenic | 25.0% |
| ! | AAACCAATTCTATTCCAATT+TGG | + | chr6_3:82987761-82987780 | None:intergenic | 25.0% |
| ! | AAATACAAAATGTGACATCA+AGG | + | chr6_3:82987784-82987803 | None:intergenic | 25.0% |
| !! | ATTAGGTAAATGCTTTTGTT+TGG | - | chr6_3:82987888-82987907 | Msa0961390:intron | 25.0% |
| ! | ATAATCTTTGGATATGTAGA+AGG | + | chr6_3:82987914-82987933 | None:intergenic | 25.0% |
| ! | TTGATTGTCCAAATGAATAT+TGG | - | chr6_3:82987987-82988006 | Msa0961390:intron | 25.0% |
| ! | TGATTGTCCAAATGAATATT+GGG | - | chr6_3:82987988-82988007 | Msa0961390:intron | 25.0% |
| ! | CTTCAATATTTACATAACCT+TGG | - | chr6_3:82988586-82988605 | Msa0961390:intron | 25.0% |
| !! | CTTTTAACCAAAATATTCTC+CGG | + | chr6_3:82988634-82988653 | None:intergenic | 25.0% |
| ! | GTATTATAAATAAGATGCAG+AGG | + | chr6_3:82988949-82988968 | None:intergenic | 25.0% |
| ! | GATATCAATCTGTTAGTAAT+AGG | + | chr6_3:82989089-82989108 | None:intergenic | 25.0% |
| ! | ATTACTAACAGATTGATATC+TGG | - | chr6_3:82989089-82989108 | Msa0961390:intron | 25.0% |
| ! | AAGGATAAACAATGAATTTC+AGG | + | chr6_3:82989297-82989316 | None:intergenic | 25.0% |
| ! | ATTTATATTCTACGTGTTTC+AGG | - | chr6_3:82989420-82989439 | Msa0961390:intron | 25.0% |
| !! | TTTTACATGTGAAAATGATG+TGG | - | chr6_3:82989551-82989570 | Msa0961390:intron | 25.0% |
| !! | AAAATGATTTGTGACATATC+AGG | - | chr6_3:82989809-82989828 | Msa0961390:intron | 25.0% |
| ! | AGCATAGTTGAATATCAATA+GGG | + | chr6_3:82989990-82990009 | None:intergenic | 25.0% |
| ! | AAGCATAGTTGAATATCAAT+AGG | + | chr6_3:82989991-82990010 | None:intergenic | 25.0% |
| ! | AAAATCATATGCTTTATGAG+AGG | - | chr6_3:82990138-82990157 | Msa0961390:intron | 25.0% |
| ! | ATTGTGTTCAAAAAGCAAAA+TGG | - | chr6_3:82990250-82990269 | Msa0961390:intron | 25.0% |
| ! | TTGTGTTCAAAAAGCAAAAT+GGG | - | chr6_3:82990251-82990270 | Msa0961390:intron | 25.0% |
| ! | TTTCCATAAACTCTTTCAAA+CGG | - | chr6_3:82990436-82990455 | Msa0961390:intron | 25.0% |
| !! | TTTTCCATGATAATTAAACG+TGG | + | chr6_3:82990518-82990537 | None:intergenic | 25.0% |
| AAGAATCAAGGGAAATTGAT+CGG | - | chr6_3:82986755-82986774 | Msa0961390:CDS | 30.0% | |
| TTCATCATTTAAAGAGAACG+TGG | - | chr6_3:82986798-82986817 | Msa0961390:CDS | 30.0% | |
| CAAATTCATCTTCTGATGTA+TGG | - | chr6_3:82986857-82986876 | Msa0961390:CDS | 30.0% | |
| TTCTGATGTATGGAAAGATT+GGG | - | chr6_3:82986867-82986886 | Msa0961390:CDS | 30.0% | |
| ! | TTTTACTTGGGAAATTTCCA+CGG | - | chr6_3:82986954-82986973 | Msa0961390:intron | 30.0% |
| AGATCTGAACAAATAACATC+GGG | - | chr6_3:82986978-82986997 | Msa0961390:intron | 30.0% | |
| ! | TCTTCAGACTTAATTTTCAC+AGG | + | chr6_3:82987061-82987080 | None:intergenic | 30.0% |
| ! | ATAAGCCGTTGACTATTAAT+TGG | - | chr6_3:82987080-82987099 | Msa0961390:intron | 30.0% |
| GGACAAGAAATTAAAAATGC+AGG | - | chr6_3:82987193-82987212 | Msa0961390:intron | 30.0% | |
| ! | CAAATTACTGTCTGATTTGT+TGG | - | chr6_3:82987266-82987285 | Msa0961390:intron | 30.0% |
| !! | GTTTTAATCTTCCGATTCTT+AGG | - | chr6_3:82987387-82987406 | Msa0961390:CDS | 30.0% |
| CTTTCATCTCTTGTAATTGA+TGG | - | chr6_3:82987711-82987730 | Msa0961390:intron | 30.0% | |
| GTTCCAAATTGGAATAGAAT+TGG | - | chr6_3:82987755-82987774 | Msa0961390:intron | 30.0% | |
| AAATGAAAACTAACATCCTG+AGG | + | chr6_3:82988118-82988137 | None:intergenic | 30.0% | |
| TTCAAACTTAATTTCCGTGA+AGG | + | chr6_3:82988214-82988233 | None:intergenic | 30.0% | |
| ! | GGAAATTAAGTTTGAAGCTT+TGG | - | chr6_3:82988218-82988237 | Msa0961390:intron | 30.0% |
| ACACAGAAGAGTTTAAATGA+AGG | - | chr6_3:82988416-82988435 | Msa0961390:intron | 30.0% | |
| CACAGAAGAGTTTAAATGAA+GGG | - | chr6_3:82988417-82988436 | Msa0961390:intron | 30.0% | |
| GTTTAAATGAAGGGTGAAAT+TGG | - | chr6_3:82988426-82988445 | Msa0961390:intron | 30.0% | |
| GTCAATTACCATTCAATGTT+TGG | - | chr6_3:82988558-82988577 | Msa0961390:intron | 30.0% | |
| ! | GTTTTCCTCTCTAATACATT+AGG | - | chr6_3:82989261-82989280 | Msa0961390:intron | 30.0% |
| TTAGACCTAATGTATTAGAG+AGG | + | chr6_3:82989269-82989288 | None:intergenic | 30.0% | |
| AAGAGTGATACAACAAAAGT+TGG | + | chr6_3:82989361-82989380 | None:intergenic | 30.0% | |
| !! | ACTTTTGTTGTATCACTCTT+AGG | - | chr6_3:82989361-82989380 | Msa0961390:intron | 30.0% |
| GAACACAAATGGAATGAAAT+GGG | + | chr6_3:82989506-82989525 | None:intergenic | 30.0% | |
| TTATTTGAGTGGAACACAAA+TGG | + | chr6_3:82989517-82989536 | None:intergenic | 30.0% | |
| ACTTCATCAGTTTATTTGAG+TGG | + | chr6_3:82989528-82989547 | None:intergenic | 30.0% | |
| !!! | TAGTTTCTGTGTTGTTTTAG+TGG | - | chr6_3:82989691-82989710 | Msa0961390:intron | 30.0% |
| !!! | GTTGTTTTAGTGGAACTATA+TGG | - | chr6_3:82989701-82989720 | Msa0961390:intron | 30.0% |
| ! | TTATAGTGCAGTGCTTTATT+TGG | - | chr6_3:82989930-82989949 | Msa0961390:intron | 30.0% |
| !! | AACTATGCTTGTTGTATTGT+AGG | - | chr6_3:82990001-82990020 | Msa0961390:intron | 30.0% |
| CTTATTTCAAAATGATTCCC+CGG | - | chr6_3:82990025-82990044 | Msa0961390:intron | 30.0% | |
| TAAGCTGTTAATCCAAACAT+GGG | + | chr6_3:82990328-82990347 | None:intergenic | 30.0% | |
| TTAAGCTGTTAATCCAAACA+TGG | + | chr6_3:82990329-82990348 | None:intergenic | 30.0% | |
| CTTCTGATGTATGGAAAGAT+TGG | - | chr6_3:82986866-82986885 | Msa0961390:CDS | 35.0% | |
| TCTGATGTATGGAAAGATTG+GGG | - | chr6_3:82986868-82986887 | Msa0961390:CDS | 35.0% | |
| TTATTTGTTCAGATCTTCCG+TGG | + | chr6_3:82986974-82986993 | None:intergenic | 35.0% | |
| ! | TCAGACTTAATTTTCACAGG+AGG | + | chr6_3:82987058-82987077 | None:intergenic | 35.0% |
| TCGCTCCAATTAATAGTCAA+CGG | + | chr6_3:82987088-82987107 | None:intergenic | 35.0% | |
| TCATATCTGGATGTACCTAT+TGG | - | chr6_3:82987172-82987191 | Msa0961390:intron | 35.0% | |
| ! | AATGCGATTTTTCTCTCTCT+GGG | - | chr6_3:82987318-82987337 | Msa0961390:CDS | 35.0% |
| TATGTCCTTTCCCTAAGAAT+CGG | + | chr6_3:82987401-82987420 | None:intergenic | 35.0% | |
| ATGTCGAAATTCAATCCAAC+TGG | + | chr6_3:82987440-82987459 | None:intergenic | 35.0% | |
| AGATGAAAATTGGCAAGACT+TGG | + | chr6_3:82987580-82987599 | None:intergenic | 35.0% | |
| AGAGATGAACATTGGAAAGT+TGG | + | chr6_3:82987646-82987665 | None:intergenic | 35.0% | |
| TCATTGTTAGCGTTCCAAAT+TGG | - | chr6_3:82987744-82987763 | Msa0961390:intron | 35.0% | |
| AAGCATTTACCTAATTTCCG+TGG | + | chr6_3:82987883-82987902 | None:intergenic | 35.0% | |
| !! | GGTTTTGCTACATTTGTTGA+TGG | - | chr6_3:82987952-82987971 | Msa0961390:intron | 35.0% |
| TCAGAGTCCCAATATTCATT+TGG | + | chr6_3:82987998-82988017 | None:intergenic | 35.0% | |
| TATCTACAACTAGCATGCAA+TGG | - | chr6_3:82988138-82988157 | Msa0961390:intron | 35.0% | |
| TATAATGTCTGTAGTGTGAC+AGG | + | chr6_3:82988514-82988533 | None:intergenic | 35.0% | |
| AAGTGCTTCCAAACATTGAA+TGG | + | chr6_3:82988569-82988588 | None:intergenic | 35.0% | |
| AGTCACAATGTATTAGTCCA+AGG | + | chr6_3:82988606-82988625 | None:intergenic | 35.0% | |
| AATACATTGTGACTTGAAGC+CGG | - | chr6_3:82988612-82988631 | Msa0961390:intron | 35.0% | |
| TAAGATGCAGAGGAAAAGAA+AGG | + | chr6_3:82988939-82988958 | None:intergenic | 35.0% | |
| AACTTCTATGTAACAGCCAT+AGG | + | chr6_3:82988977-82988996 | None:intergenic | 35.0% | |
| ATTCTATAACTTCTGCCCTT+AGG | - | chr6_3:82989060-82989079 | Msa0961390:intron | 35.0% | |
| GATTCATGTCAAATTCGTGT+TGG | - | chr6_3:82989218-82989237 | Msa0961390:intron | 35.0% | |
| !! | TATCACTCTTAGGAAGTATC+TGG | - | chr6_3:82989371-82989390 | Msa0961390:intron | 35.0% |
| GGAACACAAATGGAATGAAA+TGG | + | chr6_3:82989507-82989526 | None:intergenic | 35.0% | |
| ACAGCGATAATGCATTACAA+TGG | + | chr6_3:82989593-82989612 | None:intergenic | 35.0% | |
| ! | TATTTTCTGCTATCCACGAT+TGG | - | chr6_3:82989658-82989677 | Msa0961390:intron | 35.0% |
| ! | ATTTTCTGCTATCCACGATT+GGG | - | chr6_3:82989659-82989678 | Msa0961390:intron | 35.0% |
| AAAGTATGCTAGCAAAAGGA+CGG | - | chr6_3:82990093-82990112 | Msa0961390:intron | 35.0% | |
| TATGCTTTATGAGAGGAATC+AGG | - | chr6_3:82990145-82990164 | Msa0961390:intron | 35.0% | |
| AGACCGTTTGAAAGAGTTTA+TGG | + | chr6_3:82990442-82990461 | None:intergenic | 35.0% | |
| GTATGTTACAATTGTTGCCA+TGG | - | chr6_3:82990489-82990508 | Msa0961390:intron | 35.0% | |
| TCCATGATAATTAAACGTGG+AGG | + | chr6_3:82990515-82990534 | None:intergenic | 35.0% | |
| CATGGAAAAGTTATTCAGTG+AGG | - | chr6_3:82990529-82990548 | Msa0961390:intron | 35.0% | |
| !! | AAGATGTCTTCTTTGGAATC+AGG | + | chr6_3:82990595-82990614 | None:intergenic | 35.0% |
| TTCCAAAGAAGACATCTTTG+AGG | - | chr6_3:82990597-82990616 | Msa0961390:CDS | 35.0% | |
| GGCATATATAAAAGAGCAGC+TGG | - | chr6_3:82986914-82986933 | Msa0961390:intron | 40.0% | |
| !!! | AGTGGGGAGAGTTTTTTACT+TGG | - | chr6_3:82986941-82986960 | Msa0961390:intron | 40.0% |
| !!! | GTGGGGAGAGTTTTTTACTT+GGG | - | chr6_3:82986942-82986961 | Msa0961390:intron | 40.0% |
| !! | AGCAGAAGGAAGAGTATCAA+AGG | - | chr6_3:82987029-82987048 | Msa0961390:intron | 40.0% |
| GAAGTTTGAATCCGATGGAT+TGG | - | chr6_3:82987108-82987127 | Msa0961390:intron | 40.0% | |
| GCTGACAGCTCTTTACTTAT+TGG | - | chr6_3:82987148-82987167 | Msa0961390:intron | 40.0% | |
| ACAGTAATTTGAGCCTCGAA+AGG | + | chr6_3:82987257-82987276 | None:intergenic | 40.0% | |
| ! | CAATGCGATTTTTCTCTCTC+TGG | - | chr6_3:82987317-82987336 | Msa0961390:CDS | 40.0% |
| ATCTTCCGATTCTTAGGGAA+AGG | - | chr6_3:82987393-82987412 | Msa0961390:CDS | 40.0% | |
| ! | TGAATCTCCTGACTTTGAAG+AGG | - | chr6_3:82987502-82987521 | Msa0961390:intron | 40.0% |
| ! | GAATCTCCTGACTTTGAAGA+GGG | - | chr6_3:82987503-82987522 | Msa0961390:intron | 40.0% |
| ! | ACTTTGAAGAGGGAAAGTCA+GGG | - | chr6_3:82987513-82987532 | Msa0961390:intron | 40.0% |
| ATCGATCAAACGTATGAGAG+TGG | + | chr6_3:82987549-82987568 | None:intergenic | 40.0% | |
| CATACGTTTGATCGATCATG+TGG | - | chr6_3:82987553-82987572 | Msa0961390:intron | 40.0% | |
| !! | AACATTGGAAAGTTGGTAGC+AGG | + | chr6_3:82987639-82987658 | None:intergenic | 40.0% |
| CAATTGGCATTAGCACAGAA+GGG | + | chr6_3:82987859-82987878 | None:intergenic | 40.0% | |
| TCAATTGGCATTAGCACAGA+AGG | + | chr6_3:82987860-82987879 | None:intergenic | 40.0% | |
| ACCTAATTTCCGTGGTCAAT+TGG | + | chr6_3:82987875-82987894 | None:intergenic | 40.0% | |
| ! | TATGATGACGACGATGATGT+TGG | - | chr6_3:82988022-82988041 | Msa0961390:intron | 40.0% |
| ! | ATGATGACGACGATGATGTT+GGG | - | chr6_3:82988023-82988042 | Msa0961390:intron | 40.0% |
| !! | AAACCTATTGATTCCCCTAG+TGG | - | chr6_3:82988055-82988074 | Msa0961390:intron | 40.0% |
| TGGCATCTGTTAGAGAAAAG+TGG | + | chr6_3:82988184-82988203 | None:intergenic | 40.0% | |
| TCTCTAACAGATGCCATAGT+CGG | - | chr6_3:82988188-82988207 | Msa0961390:intron | 40.0% | |
| ! | CTTGAAGCCGGAGAATATTT+TGG | - | chr6_3:82988624-82988643 | Msa0961390:intron | 40.0% |
| TAAAAGCTATAGCCGATGTG+AGG | - | chr6_3:82988648-82988667 | Msa0961390:intron | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | + | chr6_3:82988848-82988867 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | + | chr6_3:82988849-82988868 | None:intergenic | 40.0% | |
| ! | GTTGGGATAAAGGATTGGTA+GGG | + | chr6_3:82988907-82988926 | None:intergenic | 40.0% |
| !! | AGGAAAAGAAAGGCATTCAG+GGG | + | chr6_3:82988929-82988948 | None:intergenic | 40.0% |
| !! | GAGGAAAAGAAAGGCATTCA+GGG | + | chr6_3:82988930-82988949 | None:intergenic | 40.0% |
| !! | AGAGGAAAAGAAAGGCATTC+AGG | + | chr6_3:82988931-82988950 | None:intergenic | 40.0% |
| GTTAGTAATAGGGCTCCTAA+GGG | + | chr6_3:82989078-82989097 | None:intergenic | 40.0% | |
| TGTTAGTAATAGGGCTCCTA+AGG | + | chr6_3:82989079-82989098 | None:intergenic | 40.0% | |
| ATCTTGGCAGAACTTTGTAC+TGG | - | chr6_3:82989124-82989143 | Msa0961390:intron | 40.0% | |
| TCATGTCAAATTCGTGTTGG+AGG | - | chr6_3:82989221-82989240 | Msa0961390:intron | 40.0% | |
| GGGGAGAAAATCACATTTCA+AGG | + | chr6_3:82989316-82989335 | None:intergenic | 40.0% | |
| ! | TGAAATGTGATTTTCTCCCC+TGG | - | chr6_3:82989316-82989335 | Msa0961390:intron | 40.0% |
| TCTAAACAATGCCATCACCA+GGG | + | chr6_3:82989336-82989355 | None:intergenic | 40.0% | |
| ATCTAAACAATGCCATCACC+AGG | + | chr6_3:82989337-82989356 | None:intergenic | 40.0% | |
| !! | TTAGGAAGTATCTGGTAGAC+AGG | - | chr6_3:82989379-82989398 | Msa0961390:intron | 40.0% |
| !! | TGAAATGGGACAGCTTGTTT+TGG | + | chr6_3:82989492-82989511 | None:intergenic | 40.0% |
| GTAATGCATTATCGCTGTAG+TGG | - | chr6_3:82989595-82989614 | Msa0961390:intron | 40.0% | |
| TGTATGCTCTTTGCAGTTGT+AGG | - | chr6_3:82989853-82989872 | Msa0961390:intron | 40.0% | |
| TTTGGGTGAAACTGTGAAAG+CGG | - | chr6_3:82989889-82989908 | Msa0961390:intron | 40.0% | |
| ACATTACTTGCAAGGGTGAT+CGG | - | chr6_3:82990050-82990069 | Msa0961390:intron | 40.0% | |
| GCTAGCATACTTTGACCAAT+TGG | + | chr6_3:82990086-82990105 | None:intergenic | 40.0% | |
| GGTCAAAGTATGCTAGCAAA+AGG | - | chr6_3:82990089-82990108 | Msa0961390:intron | 40.0% | |
| AAGTATGCTAGCAAAAGGAC+GGG | - | chr6_3:82990094-82990113 | Msa0961390:intron | 40.0% | |
| TCGTGTATATTGCCCATGTT+TGG | - | chr6_3:82990313-82990332 | Msa0961390:CDS | 40.0% | |
| TCTTTCAAACGGTCTCGTAA+GGG | - | chr6_3:82990447-82990466 | Msa0961390:intron | 40.0% | |
| ATAATTAAACGTGGAGGCCA+TGG | + | chr6_3:82990509-82990528 | None:intergenic | 40.0% | |
| GCCTCCACGTTTAATTATCA+TGG | - | chr6_3:82990511-82990530 | Msa0961390:intron | 40.0% | |
| ! | GGTACTGTGTATTGATATGC+AGG | - | chr6_3:82990550-82990569 | Msa0961390:intron | 40.0% |
| TTGATATGCAGGAAAGCAAC+AGG | - | chr6_3:82990561-82990580 | Msa0961390:intron | 40.0% | |
| TGCCTCAAAGATGTCTTCTT+TGG | + | chr6_3:82990602-82990621 | None:intergenic | 40.0% | |
| ! | TTTGAGGCATAGATTACCGA+TGG | - | chr6_3:82990613-82990632 | Msa0961390:CDS | 40.0% |
| TTGAGGCATAGATTACCGAT+GGG | - | chr6_3:82990614-82990633 | Msa0961390:CDS | 40.0% | |
| CAACAAAGTCAATGAAGCCT+TGG | + | chr6_3:82990643-82990662 | None:intergenic | 40.0% | |
| ! | TTTAGAGCTTCAGATGCAGA+AGG | + | chr6_3:82990698-82990717 | None:intergenic | 40.0% |
| AGATTGGGGAAGCCAGATAT+TGG | - | chr6_3:82986882-82986901 | Msa0961390:CDS | 45.0% | |
| ! | AGCCAGATATTGGTTATGCG+AGG | - | chr6_3:82986892-82986911 | Msa0961390:intron | 45.0% |
| ! | GCCAGATATTGGTTATGCGA+GGG | - | chr6_3:82986893-82986912 | Msa0961390:intron | 45.0% |
| TTCTGCTTCACCAATGCAAG+AGG | + | chr6_3:82987016-82987035 | None:intergenic | 45.0% | |
| ! | TCTTGCATTGGTGAAGCAGA+AGG | - | chr6_3:82987015-82987034 | Msa0961390:intron | 45.0% |
| AGCGAGAAGTTTGAATCCGA+TGG | - | chr6_3:82987103-82987122 | Msa0961390:intron | 45.0% | |
| CTCTCTGGGCTTACATTAAG+TGG | - | chr6_3:82987332-82987351 | Msa0961390:CDS | 45.0% | |
| TCATTCACTCTGATGCCAGT+TGG | - | chr6_3:82987422-82987441 | Msa0961390:CDS | 45.0% | |
| ! | TGCACTTACCAGCTTTAGCA+CGG | - | chr6_3:82987476-82987495 | Msa0961390:intron | 45.0% |
| ATTCAGATCCGTGCTAAAGC+TGG | + | chr6_3:82987487-82987506 | None:intergenic | 45.0% | |
| GACTTTCCCTCTTCAAAGTC+AGG | + | chr6_3:82987512-82987531 | None:intergenic | 45.0% | |
| ! | GACTTTGAAGAGGGAAAGTC+AGG | - | chr6_3:82987512-82987531 | Msa0961390:intron | 45.0% |
| GTGCTAATGCCAATTGACCA+CGG | - | chr6_3:82987863-82987882 | Msa0961390:intron | 45.0% | |
| GCCAATTGACCACGGAAATT+AGG | - | chr6_3:82987871-82987890 | Msa0961390:intron | 45.0% | |
| TTGCCACTAGGGGAATCAAT+AGG | + | chr6_3:82988061-82988080 | None:intergenic | 45.0% | |
| TTCCCCTAGTGGCAATGAAA+AGG | - | chr6_3:82988066-82988085 | Msa0961390:intron | 45.0% | |
| TCCCCTAGTGGCAATGAAAA+GGG | - | chr6_3:82988067-82988086 | Msa0961390:intron | 45.0% | |
| ! | TCCCCTTTTCATTGCCACTA+GGG | + | chr6_3:82988072-82988091 | None:intergenic | 45.0% |
| AATGAAAAGGGGACTGGACA+TGG | - | chr6_3:82988079-82988098 | Msa0961390:intron | 45.0% | |
| TGGCAGAGTTTCATATCCTC+AGG | - | chr6_3:82988099-82988118 | Msa0961390:intron | 45.0% | |
| CTGGACGAACATATGAGCAA+AGG | + | chr6_3:82988717-82988736 | None:intergenic | 45.0% | |
| CTTTGCTCATATGTTCGTCC+AGG | - | chr6_3:82988715-82988734 | Msa0961390:intron | 45.0% | |
| TGAAAGCCCGAGAATAACCT+CGG | + | chr6_3:82988754-82988773 | None:intergenic | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | - | chr6_3:82988845-82988864 | Msa0961390:CDS | 45.0% | |
| AAGCTCTCGAATTCTTGGAG+CGG | + | chr6_3:82988877-82988896 | None:intergenic | 45.0% | |
| AGACCAAGCTCTCGAATTCT+TGG | + | chr6_3:82988882-82988901 | None:intergenic | 45.0% | |
| ! | GGTTGGGATAAAGGATTGGT+AGG | + | chr6_3:82988908-82988927 | None:intergenic | 45.0% |
| !! | AAGAAAGGCATTCAGGGGTT+GGG | + | chr6_3:82988924-82988943 | None:intergenic | 45.0% |
| !! | AAAGAAAGGCATTCAGGGGT+TGG | + | chr6_3:82988925-82988944 | None:intergenic | 45.0% |
| CAGATTGATATCTGGTCCCT+TGG | - | chr6_3:82989097-82989116 | Msa0961390:intron | 45.0% | |
| TTCTGCCAAGATGCATCCAA+GGG | + | chr6_3:82989116-82989135 | None:intergenic | 45.0% | |
| CTAAACAATGCCATCACCAG+GGG | + | chr6_3:82989335-82989354 | None:intergenic | 45.0% | |
| ! | GAAGTATCTGGTAGACAGGT+TGG | - | chr6_3:82989383-82989402 | Msa0961390:intron | 45.0% |
| CTAACTAGTGTTCCCAATCG+TGG | + | chr6_3:82989674-82989693 | None:intergenic | 45.0% | |
| ACCCTTGCAAGTAATGTTGC+CGG | + | chr6_3:82990047-82990066 | None:intergenic | 45.0% | |
| CATTACTTGCAAGGGTGATC+GGG | - | chr6_3:82990051-82990070 | Msa0961390:intron | 45.0% | |
| ATCGGGATTATCGGTCCAAT+TGG | - | chr6_3:82990068-82990087 | Msa0961390:intron | 45.0% | |
| CTCTTTCAAACGGTCTCGTA+AGG | - | chr6_3:82990446-82990465 | Msa0961390:intron | 45.0% | |
| TGAGGCATAGATTACCGATG+GGG | - | chr6_3:82990615-82990634 | Msa0961390:CDS | 45.0% | |
| CTTTGTTGCTCATTTGCTCG+AGG | - | chr6_3:82990655-82990674 | Msa0961390:CDS | 45.0% | |
| !!! | ATTTGATTTAAAATTTAATT+AGG | - | chr6_3:82988359-82988378 | Msa0961390:intron | 5.0% |
| !! | TATAATTAAAGATAAAATAA+AGG | - | chr6_3:82990404-82990423 | Msa0961390:CDS | 5.0% |
| GCCCTCGCATAACCAATATC+TGG | + | chr6_3:82986897-82986916 | None:intergenic | 50.0% | |
| AAAAGAGCAGCTGGACGAAG+TGG | - | chr6_3:82986923-82986942 | Msa0961390:intron | 50.0% | |
| AAAGAGCAGCTGGACGAAGT+GGG | - | chr6_3:82986924-82986943 | Msa0961390:intron | 50.0% | |
| CAGCTTAGCAGCCAATCCAT+CGG | + | chr6_3:82987122-82987141 | None:intergenic | 50.0% | |
| ! | CCCCTTTTCATTGCCACTAG+GGG | + | chr6_3:82988071-82988090 | None:intergenic | 50.0% |
| CCCCTAGTGGCAATGAAAAG+GGG | - | chr6_3:82988068-82988087 | Msa0961390:intron | 50.0% | |
| ! | GTCCCCTTTTCATTGCCACT+AGG | + | chr6_3:82988073-82988092 | None:intergenic | 50.0% |
| AGTGGCAATGAAAAGGGGAC+TGG | - | chr6_3:82988073-82988092 | Msa0961390:intron | 50.0% | |
| ATTTCCGTGAAGGCCGACTA+TGG | + | chr6_3:82988204-82988223 | None:intergenic | 50.0% | |
| CTATAGCCGATGTGAGGTGA+AGG | - | chr6_3:82988654-82988673 | Msa0961390:intron | 50.0% | |
| CAACGACCTTCACCTCACAT+CGG | + | chr6_3:82988663-82988682 | None:intergenic | 50.0% | |
| GAGGTGAAGGTCGTTGATCT+TGG | - | chr6_3:82988667-82988686 | Msa0961390:intron | 50.0% | |
| ! | AATAACCTCGGGAGCACGAT+AGG | + | chr6_3:82988742-82988761 | None:intergenic | 50.0% |
| GAAAGCCCGAGAATAACCTC+GGG | + | chr6_3:82988753-82988772 | None:intergenic | 50.0% | |
| GCTCCAAGAATTCGAGAGCT+TGG | - | chr6_3:82988876-82988895 | Msa0961390:CDS | 50.0% | |
| CAGGGGTTGGGATAAAGGAT+TGG | + | chr6_3:82988912-82988931 | None:intergenic | 50.0% | |
| GCATTCAGGGGTTGGGATAA+AGG | + | chr6_3:82988917-82988936 | None:intergenic | 50.0% | |
| GTTCTGCCAAGATGCATCCA+AGG | + | chr6_3:82989117-82989136 | None:intergenic | 50.0% | |
| ! | GTGATTTTCTCCCCTGGTGA+TGG | - | chr6_3:82989322-82989341 | Msa0961390:intron | 50.0% |
| ! | TCTGGTAGACAGGTTGGAGT+AGG | - | chr6_3:82989389-82989408 | Msa0961390:intron | 50.0% |
| CCTTGCAAGTAATGTTGCCG+GGG | + | chr6_3:82990045-82990064 | None:intergenic | 50.0% | |
| CCCTTGCAAGTAATGTTGCC+GGG | + | chr6_3:82990046-82990065 | None:intergenic | 50.0% | |
| CCCGGCAACATTACTTGCAA+GGG | - | chr6_3:82990043-82990062 | Msa0961390:intron | 50.0% | |
| GCAAGGGTGATCGGGATTAT+CGG | - | chr6_3:82990059-82990078 | Msa0961390:intron | 50.0% | |
| GAGGCATAGATTACCGATGG+GGG | - | chr6_3:82990616-82990635 | Msa0961390:CDS | 50.0% | |
| ATGCAGAAGGTCGCTTCTTC+GGG | + | chr6_3:82990685-82990704 | None:intergenic | 50.0% | |
| GATGCAGAAGGTCGCTTCTT+CGG | + | chr6_3:82990686-82990705 | None:intergenic | 50.0% | |
| AAGAGCAGCTGGACGAAGTG+GGG | - | chr6_3:82986925-82986944 | Msa0961390:intron | 55.0% | |
| !! | CGATGGATTGGCTGCTAAGC+TGG | - | chr6_3:82987120-82987139 | Msa0961390:intron | 55.0% |
| GCATGCAATGGACACTGACG+TGG | - | chr6_3:82988150-82988169 | Msa0961390:intron | 55.0% | |
| TGCAATGGACACTGACGTGG+TGG | - | chr6_3:82988153-82988172 | Msa0961390:intron | 55.0% | |
| GATGCCATAGTCGGCCTTCA+CGG | - | chr6_3:82988197-82988216 | Msa0961390:intron | 55.0% | |
| CGTGCTCCCGAGGTTATTCT+CGG | - | chr6_3:82988744-82988763 | Msa0961390:intron | 55.0% | |
| GTGCTCCCGAGGTTATTCTC+GGG | - | chr6_3:82988745-82988764 | Msa0961390:intron | 55.0% | |
| CTGGTCCCTTGGATGCATCT+TGG | - | chr6_3:82989108-82989127 | Msa0961390:intron | 55.0% | |
| CCCCGGCAACATTACTTGCA+AGG | - | chr6_3:82990042-82990061 | Msa0961390:intron | 55.0% | |
| AGATTACCGATGGGGGACCA+AGG | - | chr6_3:82990623-82990642 | Msa0961390:CDS | 55.0% | |
| ATGAAGCCTTGGTCCCCCAT+CGG | + | chr6_3:82990632-82990651 | None:intergenic | 55.0% | |
| !! | CTGAAGCTCTAAAGCACCCC+TGG | - | chr6_3:82990705-82990724 | Msa0961390:CDS | 55.0% |
| ! | CTCGGGAGCACGATAGGACC+TGG | + | chr6_3:82988736-82988755 | None:intergenic | 65.0% |
| CAGGTCCTATCGTGCTCCCG+AGG | - | chr6_3:82988734-82988753 | Msa0961390:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 82986745 | 82990736 | 82986745 | ID=Msa0961390;Name=Msa0961390 |
| chr6_3 | mRNA | 82986745 | 82990736 | 82986745 | ID=Msa0961390-mRNA-1;Parent=Msa0961390;Name=Msa0961390-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.25|0|0.6|0.5|0.8|5|0|265 |
| chr6_3 | exon | 82986745 | 82986909 | 82986745 | ID=Msa0961390-mRNA-1:exon:14843;Parent=Msa0961390-mRNA-1 |
| chr6_3 | exon | 82987315 | 82987458 | 82987315 | ID=Msa0961390-mRNA-1:exon:14842;Parent=Msa0961390-mRNA-1 |
| chr6_3 | exon | 82988755 | 82988897 | 82988755 | ID=Msa0961390-mRNA-1:exon:14841;Parent=Msa0961390-mRNA-1 |
| chr6_3 | exon | 82990267 | 82990450 | 82990267 | ID=Msa0961390-mRNA-1:exon:14840;Parent=Msa0961390-mRNA-1 |
| chr6_3 | exon | 82990578 | 82990736 | 82990578 | ID=Msa0961390-mRNA-1:exon:14839;Parent=Msa0961390-mRNA-1 |
| chr6_3 | CDS | 82990578 | 82990736 | 82990578 | ID=Msa0961390-mRNA-1:cds;Parent=Msa0961390-mRNA-1 |
| chr6_3 | CDS | 82990267 | 82990450 | 82990267 | ID=Msa0961390-mRNA-1:cds;Parent=Msa0961390-mRNA-1 |
| chr6_3 | CDS | 82988755 | 82988897 | 82988755 | ID=Msa0961390-mRNA-1:cds;Parent=Msa0961390-mRNA-1 |
| chr6_3 | CDS | 82987315 | 82987458 | 82987315 | ID=Msa0961390-mRNA-1:cds;Parent=Msa0961390-mRNA-1 |
| chr6_3 | CDS | 82986745 | 82986909 | 82986745 | ID=Msa0961390-mRNA-1:cds;Parent=Msa0961390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
