Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961950 | QSD99826.1 | 71.094 | 256 | 30 | 6 | 1 | 212 | 1 | 256 | 1.79e-110 | 327 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961950 | sp|Q9FY93|NAC83_ARATH | 60.479 | 167 | 40 | 3 | 1 | 141 | 1 | 167 | 1.75e-63 | 200 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961950 | A0A896WEL3 | 71.094 | 256 | 30 | 6 | 1 | 212 | 1 | 256 | 8.56e-111 | 327 |
Gene ID | Type | Classification |
---|---|---|
Msa0961950 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961950 | MtrunA17_Chr7g0214071 | 71.815 | 259 | 24 | 9 | 1 | 213 | 1 | 256 | 1.06e-109 | 315 |
Msa0961950 | MtrunA17_Chr8g0385991 | 47.159 | 176 | 58 | 4 | 1 | 142 | 1 | 175 | 1.83e-48 | 158 |
Msa0961950 | MtrunA17_Chr3g0131911 | 41.778 | 225 | 81 | 6 | 1 | 187 | 1 | 213 | 8.10e-45 | 149 |
Msa0961950 | MtrunA17_Chr7g0243371 | 82.895 | 76 | 13 | 0 | 47 | 122 | 24 | 99 | 6.07e-41 | 135 |
Msa0961950 | MtrunA17_Chr5g0417791 | 45.570 | 158 | 50 | 4 | 12 | 135 | 1 | 156 | 2.16e-37 | 130 |
Msa0961950 | MtrunA17_Chr4g0042561 | 46.541 | 159 | 49 | 5 | 14 | 138 | 9 | 165 | 2.51e-37 | 130 |
Msa0961950 | MtrunA17_Chr4g0060931 | 40.933 | 193 | 73 | 8 | 1 | 155 | 1 | 190 | 5.66e-36 | 129 |
Msa0961950 | MtrunA17_Chr4g0047841 | 43.103 | 174 | 46 | 4 | 14 | 134 | 15 | 188 | 9.89e-36 | 128 |
Msa0961950 | MtrunA17_Chr2g0318101 | 40.426 | 188 | 60 | 5 | 14 | 149 | 15 | 202 | 7.38e-35 | 126 |
Msa0961950 | MtrunA17_Chr1g0183741 | 35.455 | 220 | 108 | 5 | 14 | 200 | 10 | 228 | 8.05e-35 | 124 |
Msa0961950 | MtrunA17_Chr4g0017921 | 41.209 | 182 | 70 | 8 | 14 | 161 | 8 | 186 | 1.61e-34 | 125 |
Msa0961950 | MtrunA17_Chr7g0263931 | 43.871 | 155 | 53 | 4 | 11 | 131 | 8 | 162 | 3.03e-34 | 124 |
Msa0961950 | MtrunA17_Chr2g0326361 | 43.421 | 152 | 52 | 3 | 14 | 131 | 14 | 165 | 4.14e-34 | 124 |
Msa0961950 | MtrunA17_Chr7g0252971 | 42.169 | 166 | 55 | 5 | 14 | 138 | 8 | 173 | 4.19e-34 | 124 |
Msa0961950 | MtrunA17_Chr2g0309331 | 43.312 | 157 | 57 | 6 | 10 | 135 | 6 | 161 | 5.94e-34 | 124 |
Msa0961950 | MtrunA17_Chr4g0018391 | 42.484 | 153 | 55 | 5 | 14 | 135 | 7 | 157 | 7.14e-34 | 124 |
Msa0961950 | MtrunA17_Chr3g0139331 | 41.772 | 158 | 64 | 3 | 11 | 140 | 8 | 165 | 7.37e-34 | 123 |
Msa0961950 | MtrunA17_Chr3g0109821 | 47.403 | 154 | 46 | 7 | 14 | 134 | 6 | 157 | 7.91e-34 | 127 |
Msa0961950 | MtrunA17_Chr1g0147421 | 43.931 | 173 | 62 | 6 | 11 | 154 | 24 | 190 | 1.01e-33 | 123 |
Msa0961950 | MtrunA17_Chr1g0200561 | 41.358 | 162 | 62 | 5 | 14 | 144 | 19 | 178 | 1.48e-33 | 123 |
Msa0961950 | MtrunA17_Chr2g0309891 | 43.590 | 156 | 53 | 5 | 12 | 134 | 4 | 157 | 2.52e-33 | 122 |
Msa0961950 | MtrunA17_Chr2g0316971 | 42.038 | 157 | 59 | 4 | 14 | 138 | 23 | 179 | 5.16e-33 | 122 |
Msa0961950 | MtrunA17_Chr3g0124761 | 44.937 | 158 | 51 | 5 | 11 | 135 | 4 | 158 | 1.05e-32 | 119 |
Msa0961950 | MtrunA17_Chr5g0405211 | 39.623 | 159 | 63 | 5 | 14 | 141 | 8 | 164 | 2.74e-32 | 119 |
Msa0961950 | MtrunA17_Chr6g0481091 | 42.484 | 153 | 54 | 5 | 14 | 134 | 6 | 156 | 2.77e-32 | 117 |
Msa0961950 | MtrunA17_Chr3g0091921 | 41.071 | 168 | 65 | 5 | 11 | 146 | 13 | 178 | 2.80e-32 | 118 |
Msa0961950 | MtrunA17_Chr7g0261411 | 42.466 | 146 | 56 | 4 | 14 | 132 | 10 | 154 | 6.11e-32 | 117 |
Msa0961950 | MtrunA17_Chr8g0384721 | 41.615 | 161 | 57 | 4 | 9 | 135 | 2 | 159 | 1.18e-31 | 116 |
Msa0961950 | MtrunA17_Chr8g0346001 | 38.021 | 192 | 70 | 7 | 2 | 151 | 3 | 187 | 1.73e-31 | 119 |
Msa0961950 | MtrunA17_Chr4g0056541 | 42.484 | 153 | 55 | 5 | 14 | 135 | 7 | 157 | 1.80e-31 | 117 |
Msa0961950 | MtrunA17_Chr5g0398971 | 40.385 | 156 | 60 | 5 | 14 | 137 | 7 | 161 | 1.98e-31 | 117 |
Msa0961950 | MtrunA17_Chr8g0372121 | 40.523 | 153 | 58 | 5 | 14 | 135 | 6 | 156 | 4.33e-31 | 115 |
Msa0961950 | MtrunA17_Chr5g0433781 | 38.674 | 181 | 69 | 7 | 14 | 162 | 6 | 176 | 5.81e-31 | 119 |
Msa0961950 | MtrunA17_Chr2g0318081 | 42.771 | 166 | 60 | 5 | 11 | 143 | 13 | 176 | 6.43e-31 | 116 |
Msa0961950 | MtrunA17_Chr6g0453451 | 38.095 | 168 | 70 | 5 | 11 | 146 | 17 | 182 | 1.59e-30 | 114 |
Msa0961950 | MtrunA17_Chr3g0130731 | 42.500 | 160 | 56 | 5 | 9 | 135 | 2 | 158 | 5.14e-30 | 112 |
Msa0961950 | MtrunA17_Chr2g0312321 | 38.220 | 191 | 82 | 7 | 11 | 172 | 8 | 191 | 6.25e-30 | 112 |
Msa0961950 | MtrunA17_Chr6g0461661 | 39.130 | 161 | 66 | 4 | 12 | 140 | 16 | 176 | 1.24e-29 | 113 |
Msa0961950 | MtrunA17_Chr5g0400461 | 34.343 | 198 | 93 | 4 | 10 | 170 | 2 | 199 | 3.10e-29 | 111 |
Msa0961950 | MtrunA17_Chr8g0361731 | 31.746 | 252 | 122 | 6 | 1 | 207 | 1 | 247 | 1.10e-28 | 110 |
Msa0961950 | MtrunA17_Chr6g0484441 | 39.241 | 158 | 66 | 4 | 11 | 140 | 2 | 157 | 1.71e-28 | 108 |
Msa0961950 | MtrunA17_Chr7g0253011 | 40.936 | 171 | 64 | 7 | 1 | 134 | 1 | 171 | 5.45e-28 | 108 |
Msa0961950 | MtrunA17_Chr8g0359921 | 41.358 | 162 | 61 | 5 | 11 | 140 | 11 | 170 | 7.53e-28 | 107 |
Msa0961950 | MtrunA17_Chr5g0417001 | 34.254 | 181 | 81 | 3 | 1 | 143 | 1 | 181 | 2.71e-27 | 107 |
Msa0961950 | MtrunA17_Chr3g0144271 | 39.490 | 157 | 57 | 5 | 8 | 133 | 17 | 166 | 5.17e-27 | 106 |
Msa0961950 | MtrunA17_Chr4g0054791 | 39.610 | 154 | 60 | 4 | 14 | 134 | 6 | 159 | 6.81e-27 | 104 |
Msa0961950 | MtrunA17_Chr5g0428991 | 40.645 | 155 | 58 | 4 | 13 | 135 | 24 | 176 | 2.77e-26 | 105 |
Msa0961950 | MtrunA17_Chr5g0442771 | 37.438 | 203 | 80 | 9 | 8 | 170 | 13 | 208 | 6.56e-26 | 102 |
Msa0961950 | MtrunA17_Chr3g0130101 | 37.576 | 165 | 69 | 5 | 16 | 148 | 9 | 171 | 6.99e-26 | 102 |
Msa0961950 | MtrunA17_Chr7g0217721 | 34.804 | 204 | 84 | 7 | 7 | 165 | 12 | 211 | 7.56e-26 | 102 |
Msa0961950 | MtrunA17_Chr2g0311651 | 34.574 | 188 | 77 | 6 | 6 | 148 | 13 | 199 | 1.05e-25 | 101 |
Msa0961950 | MtrunA17_Chr3g0128151 | 35.714 | 182 | 73 | 5 | 14 | 163 | 22 | 191 | 1.09e-25 | 103 |
Msa0961950 | MtrunA17_Chr1g0197361 | 37.576 | 165 | 69 | 5 | 16 | 148 | 10 | 172 | 2.13e-25 | 103 |
Msa0961950 | MtrunA17_Chr3g0128111 | 38.000 | 150 | 59 | 4 | 17 | 134 | 45 | 192 | 2.28e-25 | 99.4 |
Msa0961950 | MtrunA17_Chr3g0092671 | 37.278 | 169 | 72 | 5 | 12 | 148 | 3 | 169 | 3.92e-25 | 102 |
Msa0961950 | MtrunA17_Chr1g0201021 | 38.509 | 161 | 61 | 6 | 16 | 142 | 21 | 177 | 4.01e-25 | 102 |
Msa0961950 | MtrunA17_Chr3g0113001 | 48.039 | 102 | 45 | 3 | 48 | 143 | 26 | 125 | 1.22e-23 | 95.5 |
Msa0961950 | MtrunA17_Chr1g0197351 | 38.235 | 170 | 63 | 5 | 14 | 144 | 42 | 208 | 1.52e-23 | 97.4 |
Msa0961950 | MtrunA17_Chr6g0453131 | 36.646 | 161 | 60 | 6 | 14 | 134 | 15 | 173 | 1.73e-23 | 96.7 |
Msa0961950 | MtrunA17_Chr4g0050701 | 35.669 | 157 | 72 | 5 | 14 | 142 | 11 | 166 | 3.93e-23 | 92.0 |
Msa0961950 | MtrunA17_Chr2g0311661 | 35.227 | 176 | 69 | 6 | 16 | 147 | 23 | 197 | 3.98e-23 | 94.4 |
Msa0961950 | MtrunA17_Chr4g0076731 | 38.312 | 154 | 64 | 5 | 16 | 141 | 56 | 206 | 4.63e-23 | 95.9 |
Msa0961950 | MtrunA17_Chr8g0364791 | 33.929 | 168 | 77 | 4 | 13 | 148 | 5 | 170 | 7.24e-23 | 95.5 |
Msa0961950 | MtrunA17_Chr3g0113031 | 46.465 | 99 | 38 | 3 | 52 | 140 | 5 | 98 | 2.43e-22 | 91.7 |
Msa0961950 | MtrunA17_Chr7g0217711 | 38.235 | 136 | 53 | 4 | 7 | 114 | 12 | 144 | 2.76e-22 | 89.4 |
Msa0961950 | MtrunA17_Chr8g0384201 | 30.526 | 190 | 98 | 4 | 13 | 170 | 5 | 192 | 1.30e-21 | 92.0 |
Msa0961950 | MtrunA17_Chr4g0038751 | 36.054 | 147 | 64 | 5 | 16 | 134 | 17 | 161 | 1.43e-21 | 90.1 |
Msa0961950 | MtrunA17_Chr8g0345671 | 36.242 | 149 | 60 | 5 | 14 | 131 | 11 | 155 | 3.59e-21 | 90.1 |
Msa0961950 | MtrunA17_Chr8g0384351 | 34.899 | 149 | 69 | 5 | 12 | 142 | 8 | 146 | 3.82e-18 | 78.6 |
Msa0961950 | MtrunA17_Chr8g0345691 | 31.544 | 149 | 69 | 4 | 14 | 132 | 12 | 157 | 7.35e-18 | 81.3 |
Msa0961950 | MtrunA17_Chr2g0321741 | 39.091 | 110 | 57 | 3 | 26 | 131 | 28 | 131 | 5.44e-17 | 78.2 |
Msa0961950 | MtrunA17_Chr7g0266701 | 28.395 | 162 | 74 | 5 | 14 | 134 | 4 | 164 | 1.97e-16 | 75.5 |
Msa0961950 | MtrunA17_Chr4g0026141 | 34.161 | 161 | 61 | 7 | 14 | 133 | 5 | 161 | 2.14e-16 | 75.5 |
Msa0961950 | MtrunA17_Chr3g0130321 | 31.548 | 168 | 78 | 7 | 12 | 143 | 5 | 171 | 2.78e-16 | 74.3 |
Msa0961950 | MtrunA17_Chr8g0345711 | 38.931 | 131 | 47 | 6 | 14 | 113 | 12 | 140 | 4.18e-16 | 72.8 |
Msa0961950 | MtrunA17_Chr2g0321631 | 31.646 | 158 | 68 | 6 | 15 | 133 | 5 | 161 | 7.67e-15 | 70.9 |
Msa0961950 | MtrunA17_Chr8g0345731 | 32.353 | 136 | 52 | 4 | 14 | 113 | 24 | 155 | 6.54e-14 | 67.0 |
Msa0961950 | MtrunA17_Chr8g0345721 | 46.875 | 64 | 33 | 1 | 50 | 113 | 130 | 192 | 6.67e-13 | 65.1 |
Msa0961950 | MtrunA17_Chr8g0345741 | 34.906 | 106 | 55 | 5 | 35 | 134 | 37 | 134 | 3.13e-11 | 59.3 |
Msa0961950 | MtrunA17_Chr8g0345701 | 29.167 | 144 | 55 | 4 | 14 | 113 | 7 | 147 | 6.98e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961950 | AT5G13180.1 | 60.479 | 167 | 40 | 3 | 1 | 141 | 1 | 167 | 1.78e-64 | 200 |
Msa0961950 | AT2G33480.2 | 57.576 | 165 | 42 | 5 | 1 | 139 | 1 | 163 | 7.74e-57 | 181 |
Msa0961950 | AT2G33480.1 | 57.576 | 165 | 40 | 5 | 1 | 137 | 1 | 163 | 1.54e-56 | 180 |
Msa0961950 | AT2G33480.3 | 61.616 | 99 | 33 | 2 | 42 | 137 | 10 | 106 | 1.79e-36 | 127 |
Msa0961950 | AT1G77450.1 | 43.094 | 181 | 60 | 7 | 6 | 146 | 1 | 178 | 1.01e-35 | 126 |
Msa0961950 | AT2G24430.2 | 43.827 | 162 | 62 | 3 | 8 | 140 | 10 | 171 | 1.19e-35 | 128 |
Msa0961950 | AT2G24430.1 | 43.827 | 162 | 62 | 3 | 8 | 140 | 10 | 171 | 1.19e-35 | 128 |
Msa0961950 | AT1G61110.1 | 44.910 | 167 | 49 | 5 | 10 | 134 | 12 | 177 | 1.42e-35 | 128 |
Msa0961950 | AT1G69490.1 | 46.203 | 158 | 49 | 4 | 14 | 137 | 9 | 164 | 1.46e-35 | 126 |
Msa0961950 | AT1G33280.1 | 42.763 | 152 | 55 | 4 | 14 | 135 | 8 | 157 | 1.76e-35 | 127 |
Msa0961950 | AT1G62700.1 | 43.038 | 158 | 57 | 5 | 13 | 139 | 6 | 161 | 5.32e-35 | 128 |
Msa0961950 | AT1G62700.2 | 43.038 | 158 | 57 | 5 | 13 | 139 | 6 | 161 | 5.32e-35 | 128 |
Msa0961950 | AT4G10350.1 | 42.581 | 155 | 54 | 5 | 14 | 135 | 9 | 161 | 1.01e-34 | 126 |
Msa0961950 | AT3G04070.2 | 45.122 | 164 | 50 | 5 | 14 | 137 | 10 | 173 | 1.16e-34 | 126 |
Msa0961950 | AT1G12260.2 | 41.772 | 158 | 59 | 5 | 14 | 140 | 7 | 162 | 1.39e-34 | 125 |
Msa0961950 | AT5G07680.1 | 43.558 | 163 | 56 | 6 | 11 | 140 | 14 | 173 | 2.19e-34 | 125 |
Msa0961950 | AT5G07680.2 | 43.827 | 162 | 55 | 6 | 12 | 140 | 1 | 159 | 4.03e-34 | 124 |
Msa0961950 | AT5G61430.1 | 43.558 | 163 | 56 | 6 | 11 | 140 | 13 | 172 | 5.20e-34 | 124 |
Msa0961950 | AT1G12260.1 | 41.772 | 158 | 59 | 5 | 14 | 140 | 7 | 162 | 5.40e-34 | 125 |
Msa0961950 | AT5G39610.1 | 37.745 | 204 | 83 | 7 | 12 | 174 | 18 | 218 | 6.43e-34 | 122 |
Msa0961950 | AT1G76420.1 | 43.709 | 151 | 56 | 4 | 11 | 132 | 19 | 169 | 1.99e-33 | 122 |
Msa0961950 | AT5G66300.1 | 42.581 | 155 | 53 | 6 | 14 | 135 | 12 | 163 | 2.40e-33 | 121 |
Msa0961950 | AT1G54330.1 | 46.711 | 152 | 50 | 4 | 12 | 134 | 4 | 153 | 4.12e-33 | 121 |
Msa0961950 | AT2G18060.3 | 34.764 | 233 | 105 | 9 | 14 | 208 | 9 | 232 | 7.66e-33 | 121 |
Msa0961950 | AT2G18060.1 | 34.764 | 233 | 105 | 9 | 14 | 208 | 9 | 232 | 7.66e-33 | 121 |
Msa0961950 | AT5G62380.2 | 42.484 | 153 | 55 | 6 | 14 | 135 | 7 | 157 | 8.07e-33 | 121 |
Msa0961950 | AT5G62380.1 | 42.484 | 153 | 55 | 6 | 14 | 135 | 7 | 157 | 8.07e-33 | 121 |
Msa0961950 | AT3G04070.1 | 41.667 | 180 | 49 | 5 | 14 | 137 | 10 | 189 | 1.70e-32 | 120 |
Msa0961950 | AT3G18400.1 | 43.396 | 159 | 59 | 6 | 11 | 140 | 2 | 158 | 2.07e-32 | 119 |
Msa0961950 | AT1G79580.3 | 42.038 | 157 | 58 | 5 | 10 | 135 | 13 | 167 | 2.28e-32 | 120 |
Msa0961950 | AT1G79580.5 | 42.038 | 157 | 58 | 5 | 10 | 135 | 13 | 167 | 2.28e-32 | 120 |
Msa0961950 | AT1G79580.4 | 42.038 | 157 | 58 | 5 | 10 | 135 | 13 | 167 | 2.28e-32 | 120 |
Msa0961950 | AT1G79580.2 | 42.038 | 157 | 58 | 5 | 10 | 135 | 13 | 167 | 2.28e-32 | 120 |
Msa0961950 | AT1G79580.1 | 42.038 | 157 | 58 | 5 | 10 | 135 | 13 | 167 | 2.28e-32 | 120 |
Msa0961950 | AT3G17730.1 | 41.176 | 153 | 56 | 5 | 14 | 134 | 6 | 156 | 2.98e-32 | 117 |
Msa0961950 | AT4G36160.1 | 38.660 | 194 | 66 | 8 | 14 | 176 | 10 | 181 | 3.36e-32 | 120 |
Msa0961950 | AT4G36160.3 | 38.660 | 194 | 66 | 8 | 14 | 176 | 10 | 181 | 3.36e-32 | 120 |
Msa0961950 | AT4G36160.2 | 38.660 | 194 | 66 | 8 | 14 | 176 | 14 | 185 | 3.43e-32 | 120 |
Msa0961950 | AT1G65910.1 | 41.290 | 155 | 57 | 5 | 12 | 134 | 4 | 156 | 3.45e-32 | 122 |
Msa0961950 | AT5G17260.1 | 42.500 | 160 | 57 | 5 | 14 | 140 | 6 | 163 | 4.18e-32 | 121 |
Msa0961950 | AT3G15510.1 | 42.857 | 161 | 51 | 4 | 18 | 137 | 21 | 181 | 5.65e-32 | 119 |
Msa0961950 | AT5G53950.1 | 40.741 | 162 | 64 | 4 | 14 | 143 | 17 | 178 | 8.55e-32 | 119 |
Msa0961950 | AT4G27410.2 | 39.521 | 167 | 69 | 4 | 11 | 147 | 11 | 175 | 1.20e-31 | 117 |
Msa0961950 | AT3G15170.1 | 41.026 | 156 | 60 | 4 | 11 | 134 | 17 | 172 | 2.25e-31 | 116 |
Msa0961950 | AT3G61910.1 | 37.288 | 177 | 63 | 6 | 4 | 134 | 1 | 175 | 3.04e-31 | 117 |
Msa0961950 | AT3G03200.1 | 32.773 | 238 | 119 | 6 | 12 | 210 | 4 | 239 | 3.85e-31 | 119 |
Msa0961950 | AT5G46590.1 | 37.952 | 166 | 69 | 4 | 14 | 146 | 6 | 170 | 4.29e-31 | 115 |
Msa0961950 | AT2G46770.1 | 37.640 | 178 | 63 | 5 | 4 | 135 | 6 | 181 | 4.85e-31 | 117 |
Msa0961950 | AT3G12977.1 | 43.478 | 161 | 56 | 7 | 11 | 139 | 15 | 172 | 5.68e-31 | 115 |
Msa0961950 | AT1G71930.2 | 40.789 | 152 | 57 | 5 | 14 | 134 | 9 | 158 | 8.92e-31 | 115 |
Msa0961950 | AT1G71930.1 | 40.789 | 152 | 57 | 5 | 14 | 134 | 9 | 158 | 8.92e-31 | 115 |
Msa0961950 | AT1G32770.1 | 32.283 | 254 | 117 | 9 | 3 | 208 | 5 | 251 | 9.37e-31 | 116 |
Msa0961950 | AT1G01720.1 | 42.424 | 165 | 58 | 5 | 12 | 142 | 5 | 166 | 1.37e-30 | 114 |
Msa0961950 | AT4G35580.2 | 40.212 | 189 | 74 | 6 | 14 | 170 | 9 | 190 | 1.47e-30 | 117 |
Msa0961950 | AT4G35580.3 | 40.212 | 189 | 74 | 6 | 14 | 170 | 9 | 190 | 1.59e-30 | 117 |
Msa0961950 | AT5G63790.1 | 38.265 | 196 | 78 | 5 | 10 | 170 | 46 | 233 | 1.64e-30 | 114 |
Msa0961950 | AT1G52890.1 | 38.636 | 176 | 72 | 5 | 11 | 152 | 11 | 184 | 1.82e-30 | 114 |
Msa0961950 | AT3G04060.1 | 42.949 | 156 | 54 | 6 | 12 | 134 | 18 | 171 | 1.95e-30 | 114 |
Msa0961950 | AT4G35580.1 | 40.212 | 189 | 74 | 6 | 14 | 170 | 9 | 190 | 2.04e-30 | 117 |
Msa0961950 | AT5G63790.2 | 38.265 | 196 | 78 | 5 | 10 | 170 | 56 | 243 | 2.14e-30 | 114 |
Msa0961950 | AT5G18270.2 | 41.935 | 155 | 57 | 5 | 12 | 134 | 19 | 172 | 4.84e-30 | 114 |
Msa0961950 | AT5G18270.1 | 42.484 | 153 | 55 | 5 | 14 | 134 | 21 | 172 | 4.89e-30 | 114 |
Msa0961950 | AT1G33060.1 | 41.830 | 153 | 55 | 4 | 14 | 134 | 24 | 174 | 5.62e-30 | 116 |
Msa0961950 | AT1G33060.2 | 41.830 | 153 | 55 | 4 | 14 | 134 | 24 | 174 | 6.12e-30 | 116 |
Msa0961950 | AT5G08790.1 | 43.125 | 160 | 53 | 5 | 11 | 135 | 4 | 160 | 6.24e-30 | 112 |
Msa0961950 | AT1G56010.2 | 36.508 | 189 | 75 | 6 | 11 | 165 | 16 | 193 | 6.32e-30 | 113 |
Msa0961950 | AT4G27410.3 | 36.957 | 184 | 67 | 5 | 11 | 147 | 11 | 192 | 9.30e-30 | 112 |
Msa0961950 | AT3G10490.1 | 38.857 | 175 | 63 | 5 | 14 | 155 | 27 | 190 | 3.30e-29 | 109 |
Msa0961950 | AT3G15500.1 | 39.752 | 161 | 65 | 4 | 11 | 141 | 11 | 169 | 4.82e-29 | 110 |
Msa0961950 | AT3G10480.1 | 38.857 | 175 | 63 | 5 | 14 | 155 | 27 | 190 | 5.84e-29 | 112 |
Msa0961950 | AT3G10500.1 | 38.323 | 167 | 69 | 4 | 14 | 148 | 9 | 173 | 1.37e-28 | 112 |
Msa0961950 | AT5G04410.1 | 40.373 | 161 | 62 | 4 | 14 | 142 | 9 | 167 | 1.63e-28 | 112 |
Msa0961950 | AT4G28530.1 | 38.922 | 167 | 58 | 4 | 13 | 136 | 9 | 174 | 5.10e-28 | 108 |
Msa0961950 | AT3G10480.2 | 38.506 | 174 | 64 | 5 | 14 | 155 | 27 | 189 | 6.48e-28 | 109 |
Msa0961950 | AT3G10490.2 | 38.857 | 175 | 63 | 5 | 14 | 155 | 27 | 190 | 7.80e-28 | 109 |
Msa0961950 | AT3G29035.1 | 39.877 | 163 | 62 | 5 | 11 | 140 | 21 | 180 | 8.94e-28 | 107 |
Msa0961950 | AT5G46590.2 | 39.007 | 141 | 56 | 3 | 14 | 125 | 6 | 145 | 1.45e-27 | 106 |
Msa0961950 | AT4G17980.1 | 38.065 | 155 | 62 | 3 | 14 | 134 | 6 | 160 | 1.68e-27 | 105 |
Msa0961950 | AT4G17980.2 | 37.736 | 159 | 65 | 3 | 10 | 134 | 2 | 160 | 2.22e-27 | 105 |
Msa0961950 | AT4G10350.2 | 51.111 | 90 | 39 | 2 | 49 | 135 | 27 | 114 | 2.93e-27 | 105 |
Msa0961950 | AT1G52880.1 | 40.741 | 162 | 56 | 4 | 18 | 139 | 21 | 182 | 4.85e-26 | 102 |
Msa0961950 | AT1G34190.1 | 40.994 | 161 | 57 | 6 | 16 | 142 | 18 | 174 | 8.51e-26 | 104 |
Msa0961950 | AT3G49530.1 | 38.562 | 153 | 61 | 5 | 14 | 134 | 13 | 164 | 1.14e-25 | 103 |
Msa0961950 | AT3G49530.2 | 38.562 | 153 | 61 | 5 | 14 | 134 | 13 | 164 | 1.67e-25 | 102 |
Msa0961950 | AT5G61430.2 | 49.485 | 97 | 42 | 3 | 49 | 140 | 15 | 109 | 1.02e-24 | 98.6 |
Msa0961950 | AT1G32510.1 | 33.981 | 206 | 84 | 8 | 14 | 169 | 6 | 209 | 1.03e-24 | 98.6 |
Msa0961950 | AT2G02450.1 | 35.870 | 184 | 82 | 6 | 16 | 171 | 53 | 228 | 1.12e-24 | 100 |
Msa0961950 | AT5G39820.1 | 33.690 | 187 | 73 | 4 | 2 | 137 | 8 | 194 | 1.30e-24 | 99.4 |
Msa0961950 | AT2G02450.2 | 35.870 | 184 | 82 | 6 | 16 | 171 | 53 | 228 | 1.44e-24 | 100 |
Msa0961950 | AT5G64060.1 | 32.110 | 218 | 106 | 6 | 10 | 191 | 2 | 213 | 2.65e-24 | 99.0 |
Msa0961950 | AT3G12977.2 | 50.526 | 95 | 41 | 3 | 49 | 139 | 27 | 119 | 4.32e-24 | 95.9 |
Msa0961950 | AT1G34180.3 | 34.500 | 200 | 90 | 6 | 16 | 182 | 18 | 209 | 4.76e-24 | 99.0 |
Msa0961950 | AT5G09330.5 | 34.211 | 190 | 89 | 5 | 10 | 165 | 2 | 189 | 6.65e-24 | 99.0 |
Msa0961950 | AT5G09330.2 | 34.211 | 190 | 89 | 5 | 10 | 165 | 2 | 189 | 6.65e-24 | 99.0 |
Msa0961950 | AT5G09330.4 | 34.211 | 190 | 89 | 5 | 10 | 165 | 2 | 189 | 6.65e-24 | 99.0 |
Msa0961950 | AT5G09330.3 | 34.211 | 190 | 89 | 5 | 10 | 165 | 2 | 189 | 6.65e-24 | 99.0 |
Msa0961950 | AT5G09330.1 | 34.211 | 190 | 89 | 5 | 10 | 165 | 2 | 189 | 6.65e-24 | 99.0 |
Msa0961950 | AT1G34180.1 | 34.500 | 200 | 90 | 6 | 16 | 182 | 18 | 209 | 8.55e-24 | 99.0 |
Msa0961950 | AT5G24590.2 | 36.709 | 158 | 59 | 5 | 14 | 135 | 13 | 165 | 1.30e-23 | 97.8 |
Msa0961950 | AT1G26870.1 | 32.020 | 203 | 92 | 6 | 14 | 170 | 16 | 218 | 2.15e-23 | 97.1 |
Msa0961950 | AT1G56010.1 | 40.650 | 123 | 56 | 3 | 49 | 165 | 15 | 126 | 2.54e-23 | 94.4 |
Msa0961950 | AT2G17040.1 | 30.472 | 233 | 117 | 8 | 16 | 205 | 8 | 238 | 5.50e-23 | 94.0 |
Msa0961950 | AT1G34180.4 | 32.547 | 212 | 90 | 6 | 16 | 182 | 18 | 221 | 1.88e-22 | 94.7 |
Msa0961950 | AT5G22290.1 | 32.222 | 180 | 89 | 4 | 16 | 167 | 23 | 197 | 2.86e-22 | 93.2 |
Msa0961950 | AT1G34180.2 | 32.547 | 212 | 90 | 6 | 16 | 182 | 18 | 221 | 3.82e-22 | 94.4 |
Msa0961950 | AT5G04395.1 | 36.552 | 145 | 51 | 3 | 11 | 114 | 25 | 169 | 1.78e-21 | 87.8 |
Msa0961950 | AT2G43000.1 | 36.306 | 157 | 66 | 6 | 16 | 141 | 20 | 173 | 5.95e-21 | 88.6 |
Msa0961950 | AT3G10480.3 | 42.727 | 110 | 48 | 3 | 50 | 155 | 125 | 223 | 1.04e-20 | 90.1 |
Msa0961950 | AT3G44290.2 | 35.417 | 144 | 59 | 4 | 16 | 131 | 16 | 153 | 1.34e-20 | 86.7 |
Msa0961950 | AT1G32870.2 | 35.503 | 169 | 71 | 6 | 7 | 142 | 5 | 168 | 2.14e-20 | 89.0 |
Msa0961950 | AT1G32870.1 | 35.503 | 169 | 71 | 6 | 7 | 142 | 5 | 168 | 2.47e-20 | 89.0 |
Msa0961950 | AT1G32870.3 | 35.503 | 169 | 71 | 6 | 7 | 142 | 41 | 204 | 2.76e-20 | 89.0 |
Msa0961950 | AT5G64530.1 | 35.669 | 157 | 61 | 5 | 12 | 132 | 1 | 153 | 3.44e-20 | 84.3 |
Msa0961950 | AT3G12910.1 | 36.025 | 161 | 59 | 7 | 16 | 132 | 23 | 183 | 3.93e-20 | 86.7 |
Msa0961950 | AT2G27300.1 | 35.616 | 146 | 60 | 4 | 14 | 131 | 14 | 153 | 6.69e-20 | 86.7 |
Msa0961950 | AT3G44290.1 | 35.417 | 144 | 59 | 4 | 16 | 131 | 16 | 153 | 6.76e-20 | 86.7 |
Msa0961950 | AT5G64530.2 | 40.164 | 122 | 50 | 4 | 12 | 114 | 1 | 118 | 2.92e-19 | 81.3 |
Msa0961950 | AT3G10490.4 | 43.000 | 100 | 42 | 3 | 60 | 155 | 2 | 90 | 4.50e-18 | 81.6 |
Msa0961950 | AT3G10490.3 | 43.000 | 100 | 42 | 3 | 60 | 155 | 2 | 90 | 4.50e-18 | 81.6 |
Msa0961950 | AT2G18060.2 | 50.633 | 79 | 35 | 4 | 65 | 141 | 2 | 78 | 4.52e-18 | 80.9 |
Msa0961950 | AT4G01550.1 | 30.220 | 182 | 87 | 6 | 17 | 167 | 7 | 179 | 1.29e-17 | 80.9 |
Msa0961950 | AT5G14000.1 | 29.944 | 177 | 90 | 7 | 5 | 153 | 6 | 176 | 2.03e-16 | 75.1 |
Msa0961950 | AT1G02230.1 | 32.895 | 152 | 66 | 5 | 15 | 134 | 4 | 151 | 2.94e-16 | 76.6 |
Msa0961950 | AT5G22380.1 | 32.278 | 158 | 62 | 5 | 17 | 133 | 8 | 161 | 4.17e-16 | 74.7 |
Msa0961950 | AT2G43000.2 | 42.553 | 94 | 47 | 4 | 52 | 141 | 5 | 95 | 3.14e-15 | 71.6 |
Msa0961950 | AT4G01520.1 | 30.189 | 159 | 77 | 4 | 12 | 138 | 2 | 158 | 3.21e-15 | 73.2 |
Msa0961950 | AT4G01540.2 | 30.519 | 154 | 73 | 4 | 17 | 138 | 7 | 158 | 3.93e-15 | 73.6 |
Msa0961950 | AT4G01540.1 | 30.519 | 154 | 73 | 4 | 17 | 138 | 7 | 158 | 4.15e-15 | 73.6 |
Msa0961950 | AT3G44350.2 | 31.818 | 154 | 68 | 5 | 17 | 134 | 8 | 160 | 5.08e-15 | 71.6 |
Msa0961950 | AT5G14000.2 | 31.081 | 148 | 71 | 5 | 7 | 126 | 8 | 152 | 5.38e-15 | 70.1 |
Msa0961950 | AT4G01540.3 | 30.519 | 154 | 73 | 4 | 17 | 138 | 7 | 158 | 5.52e-15 | 73.2 |
Msa0961950 | AT4G01540.4 | 30.519 | 154 | 73 | 4 | 17 | 138 | 7 | 158 | 5.62e-15 | 73.2 |
Msa0961950 | AT1G02250.1 | 32.237 | 152 | 67 | 5 | 15 | 134 | 4 | 151 | 1.48e-14 | 71.6 |
Msa0961950 | AT3G04420.1 | 31.126 | 151 | 69 | 4 | 15 | 134 | 4 | 150 | 1.64e-13 | 68.6 |
Msa0961950 | AT1G02220.1 | 31.373 | 153 | 67 | 6 | 12 | 133 | 1 | 146 | 1.84e-13 | 68.9 |
Msa0961950 | AT3G04420.2 | 31.126 | 151 | 69 | 4 | 15 | 134 | 4 | 150 | 2.36e-13 | 67.8 |
Msa0961950 | AT3G44350.1 | 32.593 | 135 | 58 | 4 | 17 | 119 | 8 | 141 | 2.88e-13 | 65.5 |
Msa0961950 | AT5G22290.2 | 35.294 | 102 | 61 | 2 | 66 | 167 | 2 | 98 | 4.19e-12 | 63.9 |
Msa0961950 | AT5G50820.1 | 32.374 | 139 | 70 | 6 | 5 | 120 | 7 | 144 | 4.48e-11 | 60.1 |
Find 49 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGTTCTGCAGAATGAAAAT+TGG | 0.264479 | 6_3:+84591118 | Msa0961950:intron |
TTGGTTCCCATTTGGATACT+TGG | 0.294541 | 6_3:-84590813 | None:intergenic |
ACGGTGCTCCCATCCTCTTT+TGG | 0.306942 | 6_3:+84591372 | Msa0961950:CDS |
GGGCTACAAACTCTGGTTAC+TGG | 0.347454 | 6_3:+84590843 | Msa0961950:CDS |
CTGTTGGATTGGTTCCCATT+TGG | 0.365074 | 6_3:-84590821 | None:intergenic |
CCAAAGTTGTTGCCACTGCT+TGG | 0.398431 | 6_3:-84591204 | None:intergenic |
TTCATGTTCATTTGTGATTG+AGG | 0.408967 | 6_3:-84591325 | None:intergenic |
TCAAAGACTCATGAAGTTGT+TGG | 0.413398 | 6_3:+84590899 | Msa0961950:CDS |
ATTCATGATCCAATCAGTTC+TGG | 0.414917 | 6_3:-84590969 | None:intergenic |
CTTCATCTGTTGGATGAAAA+CGG | 0.429980 | 6_3:-84590458 | None:intergenic |
CAAATGGGAACCAATCCAAC+AGG | 0.433663 | 6_3:+84590822 | Msa0961950:CDS |
GGTTCTGCAGAATGAAAATT+GGG | 0.434250 | 6_3:+84591119 | Msa0961950:intron |
AAAGAAGCCAAGTATCCAAA+TGG | 0.440359 | 6_3:+84590806 | Msa0961950:CDS |
ACAACAAGTTCTTCATCTGT+TGG | 0.444211 | 6_3:-84590468 | None:intergenic |
AGTTTGTAGCCCTGTTGGAT+TGG | 0.451662 | 6_3:-84590832 | None:intergenic |
TCTGGTTACTGGAAAGCAAC+TGG | 0.454286 | 6_3:+84590854 | Msa0961950:CDS |
AGAAAGACTGACCAAGGGAT+TGG | 0.457513 | 6_3:-84591017 | None:intergenic |
TTACTGGAAAGCAACTGGTT+TGG | 0.462280 | 6_3:+84590859 | Msa0961950:CDS |
CCAAGCAGTGGCAACAACTT+TGG | 0.462790 | 6_3:+84591204 | Msa0961950:CDS |
GACTTGCAAAGATCAACTTC+AGG | 0.465462 | 6_3:-84590543 | None:intergenic |
AAGATCAACTTCAGGAATGA+TGG | 0.468508 | 6_3:-84590535 | None:intergenic |
TCCAACAGGGCTACAAACTC+TGG | 0.476642 | 6_3:+84590836 | Msa0961950:CDS |
TTCCTCTCACTCCAATCCCT+TGG | 0.478825 | 6_3:+84591006 | Msa0961950:CDS |
CTCATAGTTCCAGAACTGAT+TGG | 0.479030 | 6_3:+84590960 | Msa0961950:CDS |
ACCAGAGTTTGTAGCCCTGT+TGG | 0.493653 | 6_3:-84590837 | None:intergenic |
TTCATTTGTGATTGAGGAGG+AGG | 0.495223 | 6_3:-84591319 | None:intergenic |
GAATGATGGAAGCAGGTAAA+GGG | 0.510410 | 6_3:-84590521 | None:intergenic |
GATTGGAGTGAGAGGAAGTG+AGG | 0.511570 | 6_3:-84591000 | None:intergenic |
AGCTTCAGCTTCAAGTTCAA+AGG | 0.511579 | 6_3:+84591245 | Msa0961950:CDS |
TAAGCATTTCCAAAAGAGGA+TGG | 0.518802 | 6_3:-84591381 | None:intergenic |
GGATTAAGCATTTCCAAAAG+AGG | 0.521576 | 6_3:-84591385 | None:intergenic |
GGAATGATGGAAGCAGGTAA+AGG | 0.533367 | 6_3:-84590522 | None:intergenic |
ACTTCAGGAATGATGGAAGC+AGG | 0.542259 | 6_3:-84590528 | None:intergenic |
AAGAAGCCAAGTATCCAAAT+GGG | 0.544681 | 6_3:+84590807 | Msa0961950:CDS |
AGACAGCAGTAACTCATTCA+CGG | 0.562566 | 6_3:+84591353 | Msa0961950:CDS |
AAGCATTTCCAAAAGAGGAT+GGG | 0.563013 | 6_3:-84591380 | None:intergenic |
ATATTTCTGAAGAGGAGAGC+TGG | 0.573188 | 6_3:+84591153 | Msa0961950:CDS |
TGTGTCGCATATTTCTGAAG+AGG | 0.578122 | 6_3:+84591145 | Msa0961950:CDS |
CAATCAGTTCTGGAACTATG+AGG | 0.582807 | 6_3:-84590959 | None:intergenic |
TTCAGCTTCAAGTTCAAAGG+TGG | 0.584967 | 6_3:+84591248 | Msa0961950:CDS |
ATGTTCATTTGTGATTGAGG+AGG | 0.585375 | 6_3:-84591322 | None:intergenic |
AAAGGAGTGAAGCCAAGCAG+TGG | 0.615889 | 6_3:+84591192 | Msa0961950:CDS |
GTTGGATGAAAACGGAAACC+TGG | 0.621096 | 6_3:-84590450 | None:intergenic |
GGTGAATTGAGATTGCCACC+AGG | 0.622269 | 6_3:+84590432 | Msa0961950:CDS |
GACCAAGGGATTGGAGTGAG+AGG | 0.626159 | 6_3:-84591008 | None:intergenic |
TCAGTTCTGGAACTATGAGG+TGG | 0.658933 | 6_3:-84590956 | None:intergenic |
CAGTGGCAACAACTTTGGTG+AGG | 0.677310 | 6_3:+84591209 | Msa0961950:CDS |
AAATGGGAACCAATCCAACA+GGG | 0.692548 | 6_3:+84590823 | Msa0961950:CDS |
GGATGAAAACGGAAACCTGG+TGG | 0.761895 | 6_3:-84590447 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTATTAATATGAATGAAT+TGG | + | chr6_3:84591097-84591116 | Msa0961950:intron | 10.0% |
!! | ATTATTAATATGAATGAATT+GGG | + | chr6_3:84591098-84591117 | Msa0961950:intron | 10.0% |
!! | TATTATTAATATGAATGAAT+TGG | + | chr6_3:84591097-84591116 | Msa0961950:intron | 10.0% |
!! | ATTATTAATATGAATGAATT+GGG | + | chr6_3:84591098-84591117 | Msa0961950:intron | 10.0% |
!! | TCTTTCTTTGAATATGTATT+TGG | + | chr6_3:84591033-84591052 | Msa0961950:intron | 20.0% |
!! | CTTTCTTTGAATATGTATTT+GGG | + | chr6_3:84591034-84591053 | Msa0961950:intron | 20.0% |
!!! | ATTTGGGTTTTGTAATTTAA+AGG | + | chr6_3:84591050-84591069 | Msa0961950:intron | 20.0% |
!! | TCTTTCTTTGAATATGTATT+TGG | + | chr6_3:84591033-84591052 | Msa0961950:intron | 20.0% |
!! | CTTTCTTTGAATATGTATTT+GGG | + | chr6_3:84591034-84591053 | Msa0961950:intron | 20.0% |
!!! | ATTTGGGTTTTGTAATTTAA+AGG | + | chr6_3:84591050-84591069 | Msa0961950:intron | 20.0% |
!! | AAGATGAATTTTGTGAAGAA+TGG | + | chr6_3:84590411-84590430 | Msa0961950:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | - | chr6_3:84590596-84590615 | None:intergenic | 25.0% |
!! | AAGATGAATTTTGTGAAGAA+TGG | + | chr6_3:84590411-84590430 | Msa0961950:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | - | chr6_3:84590596-84590615 | None:intergenic | 25.0% |
TGTTTAATACTTGAAGCGTA+AGG | + | chr6_3:84590488-84590507 | Msa0961950:intron | 30.0% | |
TAGTAGAAGTTATCATGTTC+CGG | - | chr6_3:84590689-84590708 | None:intergenic | 30.0% | |
!! | TGTTGTTCTTTTAGGTGATA+TGG | + | chr6_3:84590757-84590776 | Msa0961950:intron | 30.0% |
!! | GGTTGTTTTCTATGATTTCT+TGG | + | chr6_3:84591269-84591288 | Msa0961950:CDS | 30.0% |
TTCATGTTCATTTGTGATTG+AGG | - | chr6_3:84591328-84591347 | None:intergenic | 30.0% | |
TGTTTAATACTTGAAGCGTA+AGG | + | chr6_3:84590488-84590507 | Msa0961950:intron | 30.0% | |
TAGTAGAAGTTATCATGTTC+CGG | - | chr6_3:84590689-84590708 | None:intergenic | 30.0% | |
!! | TGTTGTTCTTTTAGGTGATA+TGG | + | chr6_3:84590757-84590776 | Msa0961950:intron | 30.0% |
!! | GGTTGTTTTCTATGATTTCT+TGG | + | chr6_3:84591269-84591288 | Msa0961950:CDS | 30.0% |
TTCATGTTCATTTGTGATTG+AGG | - | chr6_3:84591328-84591347 | None:intergenic | 30.0% | |
CTTCATCTGTTGGATGAAAA+CGG | - | chr6_3:84590461-84590480 | None:intergenic | 35.0% | |
ACAACAAGTTCTTCATCTGT+TGG | - | chr6_3:84590471-84590490 | None:intergenic | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | - | chr6_3:84590538-84590557 | None:intergenic | 35.0% | |
GAAAAGAAAGGTTACATACC+AGG | - | chr6_3:84590584-84590603 | None:intergenic | 35.0% | |
!! | TGAGTGTGTGTTGTTCTTTT+AGG | + | chr6_3:84590749-84590768 | Msa0961950:intron | 35.0% |
AAAGAAGCCAAGTATCCAAA+TGG | + | chr6_3:84590806-84590825 | Msa0961950:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | + | chr6_3:84590807-84590826 | Msa0961950:CDS | 35.0% | |
TCAAAGACTCATGAAGTTGT+TGG | + | chr6_3:84590899-84590918 | Msa0961950:CDS | 35.0% | |
ATTCATGATCCAATCAGTTC+TGG | - | chr6_3:84590972-84590991 | None:intergenic | 35.0% | |
TTCAAAGAAAGACTGACCAA+GGG | - | chr6_3:84591025-84591044 | None:intergenic | 35.0% | |
ATTCAAAGAAAGACTGACCA+AGG | - | chr6_3:84591026-84591045 | None:intergenic | 35.0% | |
GGTTCTGCAGAATGAAAATT+GGG | + | chr6_3:84591119-84591138 | Msa0961950:intron | 35.0% | |
ATGTTCATTTGTGATTGAGG+AGG | - | chr6_3:84591325-84591344 | None:intergenic | 35.0% | |
AAGCATTTCCAAAAGAGGAT+GGG | - | chr6_3:84591383-84591402 | None:intergenic | 35.0% | |
TAAGCATTTCCAAAAGAGGA+TGG | - | chr6_3:84591384-84591403 | None:intergenic | 35.0% | |
CTTCATCTGTTGGATGAAAA+CGG | - | chr6_3:84590461-84590480 | None:intergenic | 35.0% | |
ACAACAAGTTCTTCATCTGT+TGG | - | chr6_3:84590471-84590490 | None:intergenic | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | - | chr6_3:84590538-84590557 | None:intergenic | 35.0% | |
GAAAAGAAAGGTTACATACC+AGG | - | chr6_3:84590584-84590603 | None:intergenic | 35.0% | |
!! | TGAGTGTGTGTTGTTCTTTT+AGG | + | chr6_3:84590749-84590768 | Msa0961950:intron | 35.0% |
AAAGAAGCCAAGTATCCAAA+TGG | + | chr6_3:84590806-84590825 | Msa0961950:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | + | chr6_3:84590807-84590826 | Msa0961950:CDS | 35.0% | |
TCAAAGACTCATGAAGTTGT+TGG | + | chr6_3:84590899-84590918 | Msa0961950:CDS | 35.0% | |
ATTCATGATCCAATCAGTTC+TGG | - | chr6_3:84590972-84590991 | None:intergenic | 35.0% | |
TTCAAAGAAAGACTGACCAA+GGG | - | chr6_3:84591025-84591044 | None:intergenic | 35.0% | |
ATTCAAAGAAAGACTGACCA+AGG | - | chr6_3:84591026-84591045 | None:intergenic | 35.0% | |
GGTTCTGCAGAATGAAAATT+GGG | + | chr6_3:84591119-84591138 | Msa0961950:intron | 35.0% | |
ATGTTCATTTGTGATTGAGG+AGG | - | chr6_3:84591325-84591344 | None:intergenic | 35.0% | |
AAGCATTTCCAAAAGAGGAT+GGG | - | chr6_3:84591383-84591402 | None:intergenic | 35.0% | |
TAAGCATTTCCAAAAGAGGA+TGG | - | chr6_3:84591384-84591403 | None:intergenic | 35.0% | |
! | GAATGATGGAAGCAGGTAAA+GGG | - | chr6_3:84590524-84590543 | None:intergenic | 40.0% |
GACTTGCAAAGATCAACTTC+AGG | - | chr6_3:84590546-84590565 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+GGG | + | chr6_3:84590553-84590572 | Msa0961950:intron | 40.0% | |
TTACATACCAGGTAAATCCC+AGG | - | chr6_3:84590573-84590592 | None:intergenic | 40.0% | |
TGAAGCACAGACACAAACAT+CGG | + | chr6_3:84590633-84590652 | Msa0961950:intron | 40.0% | |
TTGTTTGCAGTAGTAGTACG+TGG | - | chr6_3:84590712-84590731 | None:intergenic | 40.0% | |
CTACTGCAAACAATGTCATG+TGG | + | chr6_3:84590719-84590738 | Msa0961950:intron | 40.0% | |
TAGGTGATATGGAACAAGAG+AGG | + | chr6_3:84590768-84590787 | Msa0961950:intron | 40.0% | |
TTGGTTCCCATTTGGATACT+TGG | - | chr6_3:84590816-84590835 | None:intergenic | 40.0% | |
AAATGGGAACCAATCCAACA+GGG | + | chr6_3:84590823-84590842 | Msa0961950:CDS | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | + | chr6_3:84590859-84590878 | Msa0961950:CDS | 40.0% | |
!! | CAATCAGTTCTGGAACTATG+AGG | - | chr6_3:84590962-84590981 | None:intergenic | 40.0% |
CTCATAGTTCCAGAACTGAT+TGG | + | chr6_3:84590960-84590979 | Msa0961950:CDS | 40.0% | |
GGGTTCTGCAGAATGAAAAT+TGG | + | chr6_3:84591118-84591137 | Msa0961950:intron | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | + | chr6_3:84591145-84591164 | Msa0961950:CDS | 40.0% |
! | ATATTTCTGAAGAGGAGAGC+TGG | + | chr6_3:84591153-84591172 | Msa0961950:CDS | 40.0% |
GGTGCTAAAAATGGAGTGAA+AGG | + | chr6_3:84591174-84591193 | Msa0961950:CDS | 40.0% | |
! | AGCTTCAGCTTCAAGTTCAA+AGG | + | chr6_3:84591245-84591264 | Msa0961950:CDS | 40.0% |
! | TTCAGCTTCAAGTTCAAAGG+TGG | + | chr6_3:84591248-84591267 | Msa0961950:CDS | 40.0% |
TTCATTTGTGATTGAGGAGG+AGG | - | chr6_3:84591322-84591341 | None:intergenic | 40.0% | |
AGACAGCAGTAACTCATTCA+CGG | + | chr6_3:84591353-84591372 | Msa0961950:CDS | 40.0% | |
! | GAATGATGGAAGCAGGTAAA+GGG | - | chr6_3:84590524-84590543 | None:intergenic | 40.0% |
GACTTGCAAAGATCAACTTC+AGG | - | chr6_3:84590546-84590565 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+GGG | + | chr6_3:84590553-84590572 | Msa0961950:intron | 40.0% | |
TTACATACCAGGTAAATCCC+AGG | - | chr6_3:84590573-84590592 | None:intergenic | 40.0% | |
TGAAGCACAGACACAAACAT+CGG | + | chr6_3:84590633-84590652 | Msa0961950:intron | 40.0% | |
TTGTTTGCAGTAGTAGTACG+TGG | - | chr6_3:84590712-84590731 | None:intergenic | 40.0% | |
CTACTGCAAACAATGTCATG+TGG | + | chr6_3:84590719-84590738 | Msa0961950:intron | 40.0% | |
TAGGTGATATGGAACAAGAG+AGG | + | chr6_3:84590768-84590787 | Msa0961950:intron | 40.0% | |
TTGGTTCCCATTTGGATACT+TGG | - | chr6_3:84590816-84590835 | None:intergenic | 40.0% | |
AAATGGGAACCAATCCAACA+GGG | + | chr6_3:84590823-84590842 | Msa0961950:CDS | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | + | chr6_3:84590859-84590878 | Msa0961950:CDS | 40.0% | |
!! | CAATCAGTTCTGGAACTATG+AGG | - | chr6_3:84590962-84590981 | None:intergenic | 40.0% |
CTCATAGTTCCAGAACTGAT+TGG | + | chr6_3:84590960-84590979 | Msa0961950:CDS | 40.0% | |
GGGTTCTGCAGAATGAAAAT+TGG | + | chr6_3:84591118-84591137 | Msa0961950:intron | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | + | chr6_3:84591145-84591164 | Msa0961950:CDS | 40.0% |
! | ATATTTCTGAAGAGGAGAGC+TGG | + | chr6_3:84591153-84591172 | Msa0961950:CDS | 40.0% |
GGTGCTAAAAATGGAGTGAA+AGG | + | chr6_3:84591174-84591193 | Msa0961950:CDS | 40.0% | |
! | AGCTTCAGCTTCAAGTTCAA+AGG | + | chr6_3:84591245-84591264 | Msa0961950:CDS | 40.0% |
! | TTCAGCTTCAAGTTCAAAGG+TGG | + | chr6_3:84591248-84591267 | Msa0961950:CDS | 40.0% |
TTCATTTGTGATTGAGGAGG+AGG | - | chr6_3:84591322-84591341 | None:intergenic | 40.0% | |
AGACAGCAGTAACTCATTCA+CGG | + | chr6_3:84591353-84591372 | Msa0961950:CDS | 40.0% | |
GTTGGATGAAAACGGAAACC+TGG | - | chr6_3:84590453-84590472 | None:intergenic | 45.0% | |
! | GGAATGATGGAAGCAGGTAA+AGG | - | chr6_3:84590525-84590544 | None:intergenic | 45.0% |
! | ACTTCAGGAATGATGGAAGC+AGG | - | chr6_3:84590531-84590550 | None:intergenic | 45.0% |
GATCTTTGCAAGTCTGATCC+TGG | + | chr6_3:84590552-84590571 | Msa0961950:intron | 45.0% | |
CACAAACATCGGACACAACA+TGG | + | chr6_3:84590644-84590663 | Msa0961950:intron | 45.0% | |
ACACTGACACATTCAGACAC+CGG | + | chr6_3:84590667-84590686 | Msa0961950:intron | 45.0% | |
!! | CTGTTGGATTGGTTCCCATT+TGG | - | chr6_3:84590824-84590843 | None:intergenic | 45.0% |
CAAATGGGAACCAATCCAAC+AGG | + | chr6_3:84590822-84590841 | Msa0961950:CDS | 45.0% | |
AGTTTGTAGCCCTGTTGGAT+TGG | - | chr6_3:84590835-84590854 | None:intergenic | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | + | chr6_3:84590854-84590873 | Msa0961950:CDS | 45.0% | |
!! | TCAGTTCTGGAACTATGAGG+TGG | - | chr6_3:84590959-84590978 | None:intergenic | 45.0% |
AGAAAGACTGACCAAGGGAT+TGG | - | chr6_3:84591020-84591039 | None:intergenic | 45.0% | |
! | AGGAGAGCTGGTGCTAAAAA+TGG | + | chr6_3:84591165-84591184 | Msa0961950:CDS | 45.0% |
GTTGGATGAAAACGGAAACC+TGG | - | chr6_3:84590453-84590472 | None:intergenic | 45.0% | |
! | GGAATGATGGAAGCAGGTAA+AGG | - | chr6_3:84590525-84590544 | None:intergenic | 45.0% |
! | ACTTCAGGAATGATGGAAGC+AGG | - | chr6_3:84590531-84590550 | None:intergenic | 45.0% |
GATCTTTGCAAGTCTGATCC+TGG | + | chr6_3:84590552-84590571 | Msa0961950:intron | 45.0% | |
CACAAACATCGGACACAACA+TGG | + | chr6_3:84590644-84590663 | Msa0961950:intron | 45.0% | |
ACACTGACACATTCAGACAC+CGG | + | chr6_3:84590667-84590686 | Msa0961950:intron | 45.0% | |
!! | CTGTTGGATTGGTTCCCATT+TGG | - | chr6_3:84590824-84590843 | None:intergenic | 45.0% |
CAAATGGGAACCAATCCAAC+AGG | + | chr6_3:84590822-84590841 | Msa0961950:CDS | 45.0% | |
AGTTTGTAGCCCTGTTGGAT+TGG | - | chr6_3:84590835-84590854 | None:intergenic | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | + | chr6_3:84590854-84590873 | Msa0961950:CDS | 45.0% | |
!! | TCAGTTCTGGAACTATGAGG+TGG | - | chr6_3:84590959-84590978 | None:intergenic | 45.0% |
AGAAAGACTGACCAAGGGAT+TGG | - | chr6_3:84591020-84591039 | None:intergenic | 45.0% | |
! | AGGAGAGCTGGTGCTAAAAA+TGG | + | chr6_3:84591165-84591184 | Msa0961950:CDS | 45.0% |
GGTGAATTGAGATTGCCACC+AGG | + | chr6_3:84590432-84590451 | Msa0961950:CDS | 50.0% | |
GGATGAAAACGGAAACCTGG+TGG | - | chr6_3:84590450-84590469 | None:intergenic | 50.0% | |
GTCTGATCCTGGGATTTACC+TGG | + | chr6_3:84590563-84590582 | Msa0961950:intron | 50.0% | |
TCCAACAGGGCTACAAACTC+TGG | + | chr6_3:84590836-84590855 | Msa0961950:CDS | 50.0% | |
ACCAGAGTTTGTAGCCCTGT+TGG | - | chr6_3:84590840-84590859 | None:intergenic | 50.0% | |
GGGCTACAAACTCTGGTTAC+TGG | + | chr6_3:84590843-84590862 | Msa0961950:CDS | 50.0% | |
GATTGGAGTGAGAGGAAGTG+AGG | - | chr6_3:84591003-84591022 | None:intergenic | 50.0% | |
TTCCTCTCACTCCAATCCCT+TGG | + | chr6_3:84591006-84591025 | Msa0961950:CDS | 50.0% | |
AAAGGAGTGAAGCCAAGCAG+TGG | + | chr6_3:84591192-84591211 | Msa0961950:CDS | 50.0% | |
CCAAAGTTGTTGCCACTGCT+TGG | - | chr6_3:84591207-84591226 | None:intergenic | 50.0% | |
CCAAGCAGTGGCAACAACTT+TGG | + | chr6_3:84591204-84591223 | Msa0961950:CDS | 50.0% | |
CAGTGGCAACAACTTTGGTG+AGG | + | chr6_3:84591209-84591228 | Msa0961950:CDS | 50.0% | |
GGTGAATTGAGATTGCCACC+AGG | + | chr6_3:84590432-84590451 | Msa0961950:CDS | 50.0% | |
GGATGAAAACGGAAACCTGG+TGG | - | chr6_3:84590450-84590469 | None:intergenic | 50.0% | |
GTCTGATCCTGGGATTTACC+TGG | + | chr6_3:84590563-84590582 | Msa0961950:intron | 50.0% | |
TCCAACAGGGCTACAAACTC+TGG | + | chr6_3:84590836-84590855 | Msa0961950:CDS | 50.0% | |
ACCAGAGTTTGTAGCCCTGT+TGG | - | chr6_3:84590840-84590859 | None:intergenic | 50.0% | |
GGGCTACAAACTCTGGTTAC+TGG | + | chr6_3:84590843-84590862 | Msa0961950:CDS | 50.0% | |
GATTGGAGTGAGAGGAAGTG+AGG | - | chr6_3:84591003-84591022 | None:intergenic | 50.0% | |
TTCCTCTCACTCCAATCCCT+TGG | + | chr6_3:84591006-84591025 | Msa0961950:CDS | 50.0% | |
AAAGGAGTGAAGCCAAGCAG+TGG | + | chr6_3:84591192-84591211 | Msa0961950:CDS | 50.0% | |
CCAAAGTTGTTGCCACTGCT+TGG | - | chr6_3:84591207-84591226 | None:intergenic | 50.0% | |
CCAAGCAGTGGCAACAACTT+TGG | + | chr6_3:84591204-84591223 | Msa0961950:CDS | 50.0% | |
CAGTGGCAACAACTTTGGTG+AGG | + | chr6_3:84591209-84591228 | Msa0961950:CDS | 50.0% | |
GACCAAGGGATTGGAGTGAG+AGG | - | chr6_3:84591011-84591030 | None:intergenic | 55.0% | |
! | ACGGTGCTCCCATCCTCTTT+TGG | + | chr6_3:84591372-84591391 | Msa0961950:CDS | 55.0% |
GACCAAGGGATTGGAGTGAG+AGG | - | chr6_3:84591011-84591030 | None:intergenic | 55.0% | |
! | ACGGTGCTCCCATCCTCTTT+TGG | + | chr6_3:84591372-84591391 | Msa0961950:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 84590405 | 84591404 | 84590405 | ID=Msa0961950;Name=Msa0961950 |
chr6_3 | mRNA | 84590405 | 84591404 | 84590405 | ID=Msa0961950-mRNA-1;Parent=Msa0961950;Name=Msa0961950-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|0.33|0.5|4|0|213 |
chr6_3 | exon | 84590405 | 84590485 | 84590405 | ID=Msa0961950-mRNA-1:exon:15175;Parent=Msa0961950-mRNA-1 |
chr6_3 | exon | 84590504 | 84590562 | 84590504 | ID=Msa0961950-mRNA-1:exon:15176;Parent=Msa0961950-mRNA-1 |
chr6_3 | exon | 84590802 | 84591027 | 84590802 | ID=Msa0961950-mRNA-1:exon:15177;Parent=Msa0961950-mRNA-1 |
chr6_3 | exon | 84591129 | 84591404 | 84591129 | ID=Msa0961950-mRNA-1:exon:15178;Parent=Msa0961950-mRNA-1 |
chr6_3 | CDS | 84590405 | 84590485 | 84590405 | ID=Msa0961950-mRNA-1:cds;Parent=Msa0961950-mRNA-1 |
chr6_3 | CDS | 84590504 | 84590562 | 84590504 | ID=Msa0961950-mRNA-1:cds;Parent=Msa0961950-mRNA-1 |
chr6_3 | CDS | 84590802 | 84591027 | 84590802 | ID=Msa0961950-mRNA-1:cds;Parent=Msa0961950-mRNA-1 |
chr6_3 | CDS | 84591129 | 84591404 | 84591129 | ID=Msa0961950-mRNA-1:cds;Parent=Msa0961950-mRNA-1 |
Gene Sequence |
Protein sequence |