Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0962020 | QSD99826.1 | 82.677 | 254 | 27 | 4 | 1 | 237 | 1 | 254 | 4.57e-142 | 408 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0962020 | sp|Q9FY93|NAC83_ARATH | 71.856 | 167 | 45 | 1 | 1 | 165 | 1 | 167 | 6.21e-89 | 266 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0962020 | A0A896WEL3 | 82.677 | 254 | 27 | 4 | 1 | 237 | 1 | 254 | 2.18e-142 | 408 |
Gene ID | Type | Classification |
---|---|---|
Msa0962020 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0962020 | MtrunA17_Chr7g0214071 | 82.031 | 256 | 24 | 7 | 1 | 237 | 1 | 253 | 4.71e-137 | 385 |
Msa0962020 | MtrunA17_Chr8g0385991 | 61.047 | 172 | 56 | 3 | 1 | 162 | 1 | 171 | 8.58e-73 | 221 |
Msa0962020 | MtrunA17_Chr3g0131911 | 59.302 | 172 | 58 | 3 | 1 | 160 | 1 | 172 | 9.23e-68 | 209 |
Msa0962020 | MtrunA17_Chr4g0047841 | 53.552 | 183 | 56 | 3 | 13 | 166 | 14 | 196 | 5.63e-59 | 189 |
Msa0962020 | MtrunA17_Chr7g0252971 | 46.569 | 204 | 84 | 4 | 11 | 197 | 5 | 200 | 7.56e-58 | 186 |
Msa0962020 | MtrunA17_Chr2g0318101 | 53.191 | 188 | 63 | 5 | 14 | 176 | 15 | 202 | 8.51e-58 | 187 |
Msa0962020 | MtrunA17_Chr4g0042561 | 57.233 | 159 | 56 | 4 | 14 | 162 | 9 | 165 | 2.77e-56 | 180 |
Msa0962020 | MtrunA17_Chr5g0417791 | 56.329 | 158 | 57 | 3 | 12 | 159 | 1 | 156 | 3.11e-56 | 180 |
Msa0962020 | MtrunA17_Chr3g0124761 | 56.024 | 166 | 59 | 5 | 11 | 167 | 4 | 164 | 9.23e-55 | 177 |
Msa0962020 | MtrunA17_Chr7g0263931 | 47.120 | 191 | 90 | 4 | 9 | 189 | 6 | 195 | 2.12e-54 | 177 |
Msa0962020 | MtrunA17_Chr2g0309891 | 43.860 | 228 | 102 | 6 | 12 | 216 | 4 | 228 | 6.43e-54 | 176 |
Msa0962020 | MtrunA17_Chr7g0243371 | 89.773 | 88 | 9 | 0 | 59 | 146 | 12 | 99 | 1.06e-53 | 169 |
Msa0962020 | MtrunA17_Chr3g0109821 | 58.974 | 156 | 53 | 5 | 12 | 158 | 4 | 157 | 1.38e-53 | 182 |
Msa0962020 | MtrunA17_Chr4g0018391 | 52.500 | 160 | 67 | 4 | 14 | 166 | 7 | 164 | 1.73e-52 | 173 |
Msa0962020 | MtrunA17_Chr5g0433781 | 45.581 | 215 | 90 | 9 | 12 | 218 | 4 | 199 | 4.12e-52 | 178 |
Msa0962020 | MtrunA17_Chr2g0326361 | 53.289 | 152 | 61 | 2 | 14 | 155 | 14 | 165 | 4.94e-52 | 171 |
Msa0962020 | MtrunA17_Chr3g0139331 | 51.923 | 156 | 71 | 2 | 11 | 162 | 8 | 163 | 7.44e-52 | 171 |
Msa0962020 | MtrunA17_Chr4g0017921 | 48.087 | 183 | 77 | 5 | 14 | 181 | 8 | 187 | 1.30e-51 | 171 |
Msa0962020 | MtrunA17_Chr1g0147421 | 53.503 | 157 | 68 | 3 | 11 | 162 | 24 | 180 | 2.67e-51 | 170 |
Msa0962020 | MtrunA17_Chr4g0060931 | 46.667 | 195 | 86 | 7 | 1 | 182 | 1 | 190 | 5.15e-51 | 169 |
Msa0962020 | MtrunA17_Chr5g0405211 | 49.112 | 169 | 77 | 4 | 11 | 172 | 5 | 171 | 6.53e-51 | 169 |
Msa0962020 | MtrunA17_Chr8g0384721 | 43.548 | 248 | 104 | 10 | 10 | 232 | 3 | 239 | 7.08e-51 | 167 |
Msa0962020 | MtrunA17_Chr5g0398971 | 48.447 | 161 | 74 | 3 | 14 | 166 | 7 | 166 | 1.30e-50 | 168 |
Msa0962020 | MtrunA17_Chr2g0316971 | 50.625 | 160 | 71 | 2 | 11 | 162 | 20 | 179 | 1.59e-50 | 169 |
Msa0962020 | MtrunA17_Chr2g0309331 | 50.318 | 157 | 70 | 3 | 10 | 159 | 6 | 161 | 1.94e-50 | 167 |
Msa0962020 | MtrunA17_Chr6g0484441 | 44.444 | 207 | 98 | 5 | 11 | 213 | 2 | 195 | 2.28e-50 | 167 |
Msa0962020 | MtrunA17_Chr2g0318081 | 55.484 | 155 | 61 | 3 | 10 | 158 | 12 | 164 | 3.38e-50 | 167 |
Msa0962020 | MtrunA17_Chr1g0183741 | 41.048 | 229 | 109 | 6 | 14 | 236 | 10 | 218 | 3.83e-50 | 165 |
Msa0962020 | MtrunA17_Chr1g0200561 | 51.613 | 155 | 66 | 3 | 11 | 158 | 16 | 168 | 4.82e-50 | 167 |
Msa0962020 | MtrunA17_Chr4g0056541 | 51.948 | 154 | 65 | 3 | 13 | 159 | 6 | 157 | 9.34e-50 | 166 |
Msa0962020 | MtrunA17_Chr8g0361731 | 39.600 | 250 | 132 | 5 | 1 | 234 | 1 | 247 | 1.63e-49 | 166 |
Msa0962020 | MtrunA17_Chr6g0481091 | 50.303 | 165 | 71 | 4 | 12 | 168 | 4 | 165 | 2.03e-49 | 162 |
Msa0962020 | MtrunA17_Chr3g0091921 | 50.625 | 160 | 69 | 3 | 11 | 162 | 13 | 170 | 2.88e-49 | 163 |
Msa0962020 | MtrunA17_Chr8g0372121 | 51.634 | 153 | 65 | 4 | 14 | 159 | 6 | 156 | 3.32e-49 | 163 |
Msa0962020 | MtrunA17_Chr3g0130731 | 53.459 | 159 | 62 | 3 | 10 | 159 | 3 | 158 | 6.82e-49 | 162 |
Msa0962020 | MtrunA17_Chr8g0359921 | 55.128 | 156 | 60 | 4 | 11 | 158 | 11 | 164 | 2.29e-48 | 162 |
Msa0962020 | MtrunA17_Chr6g0453451 | 49.682 | 157 | 69 | 4 | 14 | 162 | 20 | 174 | 5.04e-48 | 160 |
Msa0962020 | MtrunA17_Chr8g0346001 | 44.886 | 176 | 77 | 3 | 2 | 159 | 3 | 176 | 1.83e-47 | 162 |
Msa0962020 | MtrunA17_Chr7g0261411 | 51.370 | 146 | 67 | 2 | 14 | 156 | 10 | 154 | 3.43e-47 | 157 |
Msa0962020 | MtrunA17_Chr2g0312321 | 44.615 | 195 | 83 | 7 | 4 | 188 | 1 | 180 | 4.58e-47 | 158 |
Msa0962020 | MtrunA17_Chr5g0417001 | 45.763 | 177 | 82 | 2 | 1 | 163 | 1 | 177 | 7.55e-47 | 159 |
Msa0962020 | MtrunA17_Chr6g0461661 | 47.097 | 155 | 74 | 2 | 12 | 158 | 16 | 170 | 1.27e-46 | 159 |
Msa0962020 | MtrunA17_Chr5g0400461 | 43.889 | 180 | 91 | 2 | 10 | 179 | 2 | 181 | 1.42e-46 | 157 |
Msa0962020 | MtrunA17_Chr7g0253011 | 49.123 | 171 | 74 | 5 | 1 | 158 | 1 | 171 | 3.30e-46 | 157 |
Msa0962020 | MtrunA17_Chr5g0442771 | 50.303 | 165 | 65 | 5 | 8 | 156 | 13 | 176 | 8.97e-46 | 154 |
Msa0962020 | MtrunA17_Chr2g0311651 | 42.932 | 191 | 84 | 5 | 6 | 175 | 13 | 199 | 1.06e-45 | 154 |
Msa0962020 | MtrunA17_Chr4g0054791 | 41.148 | 209 | 108 | 4 | 14 | 207 | 6 | 214 | 1.07e-44 | 152 |
Msa0962020 | MtrunA17_Chr7g0217721 | 40.000 | 215 | 101 | 5 | 7 | 200 | 12 | 219 | 1.99e-44 | 152 |
Msa0962020 | MtrunA17_Chr3g0144271 | 50.000 | 154 | 69 | 4 | 8 | 157 | 17 | 166 | 4.67e-44 | 153 |
Msa0962020 | MtrunA17_Chr6g0453131 | 48.125 | 160 | 67 | 4 | 14 | 158 | 15 | 173 | 1.24e-43 | 151 |
Msa0962020 | MtrunA17_Chr2g0311661 | 45.810 | 179 | 75 | 5 | 1 | 159 | 9 | 185 | 1.95e-43 | 148 |
Msa0962020 | MtrunA17_Chr3g0128111 | 48.000 | 150 | 68 | 3 | 17 | 158 | 45 | 192 | 3.48e-43 | 146 |
Msa0962020 | MtrunA17_Chr5g0428991 | 50.968 | 155 | 66 | 3 | 13 | 159 | 24 | 176 | 3.87e-43 | 154 |
Msa0962020 | MtrunA17_Chr3g0128151 | 38.095 | 231 | 112 | 7 | 14 | 236 | 22 | 229 | 1.48e-42 | 152 |
Msa0962020 | MtrunA17_Chr7g0217711 | 51.852 | 135 | 60 | 3 | 7 | 138 | 12 | 144 | 2.69e-42 | 142 |
Msa0962020 | MtrunA17_Chr3g0130101 | 41.753 | 194 | 85 | 6 | 16 | 198 | 9 | 185 | 1.02e-40 | 142 |
Msa0962020 | MtrunA17_Chr1g0197351 | 49.701 | 167 | 66 | 4 | 14 | 165 | 42 | 205 | 2.25e-40 | 144 |
Msa0962020 | MtrunA17_Chr1g0201021 | 39.450 | 218 | 102 | 7 | 16 | 222 | 21 | 219 | 1.61e-39 | 143 |
Msa0962020 | MtrunA17_Chr3g0092671 | 46.584 | 161 | 76 | 4 | 16 | 168 | 7 | 165 | 2.25e-39 | 142 |
Msa0962020 | MtrunA17_Chr1g0197361 | 43.750 | 176 | 89 | 4 | 16 | 183 | 10 | 183 | 3.21e-39 | 142 |
Msa0962020 | MtrunA17_Chr4g0076731 | 49.333 | 150 | 70 | 4 | 16 | 161 | 56 | 203 | 6.18e-38 | 137 |
Msa0962020 | MtrunA17_Chr8g0345671 | 46.980 | 149 | 70 | 4 | 14 | 156 | 11 | 156 | 1.22e-37 | 135 |
Msa0962020 | MtrunA17_Chr8g0364791 | 43.373 | 166 | 80 | 4 | 13 | 168 | 5 | 166 | 4.46e-37 | 135 |
Msa0962020 | MtrunA17_Chr4g0038751 | 43.827 | 162 | 83 | 5 | 1 | 158 | 4 | 161 | 1.92e-36 | 130 |
Msa0962020 | MtrunA17_Chr8g0384201 | 43.558 | 163 | 78 | 4 | 13 | 165 | 5 | 163 | 1.29e-35 | 131 |
Msa0962020 | MtrunA17_Chr4g0050701 | 40.260 | 154 | 74 | 3 | 14 | 156 | 11 | 157 | 5.23e-34 | 120 |
Msa0962020 | MtrunA17_Chr8g0345691 | 41.333 | 150 | 79 | 4 | 13 | 156 | 11 | 157 | 7.93e-32 | 120 |
Msa0962020 | MtrunA17_Chr4g0026141 | 40.506 | 158 | 79 | 6 | 14 | 157 | 5 | 161 | 8.56e-30 | 112 |
Msa0962020 | MtrunA17_Chr2g0321631 | 40.881 | 159 | 76 | 6 | 15 | 157 | 5 | 161 | 1.44e-29 | 110 |
Msa0962020 | MtrunA17_Chr2g0321741 | 45.299 | 117 | 54 | 3 | 43 | 155 | 21 | 131 | 4.59e-29 | 112 |
Msa0962020 | MtrunA17_Chr3g0113001 | 49.573 | 117 | 51 | 3 | 49 | 159 | 3 | 117 | 5.15e-29 | 110 |
Msa0962020 | MtrunA17_Chr8g0345711 | 44.961 | 129 | 64 | 3 | 14 | 136 | 12 | 139 | 1.52e-28 | 106 |
Msa0962020 | MtrunA17_Chr8g0384351 | 40.789 | 152 | 68 | 6 | 12 | 160 | 8 | 140 | 2.48e-27 | 103 |
Msa0962020 | MtrunA17_Chr8g0345731 | 41.667 | 132 | 67 | 4 | 14 | 136 | 24 | 154 | 3.08e-26 | 100 |
Msa0962020 | MtrunA17_Chr7g0266701 | 31.674 | 221 | 123 | 9 | 14 | 212 | 4 | 218 | 5.28e-26 | 102 |
Msa0962020 | MtrunA17_Chr8g0345721 | 38.065 | 155 | 60 | 3 | 17 | 136 | 38 | 191 | 9.14e-26 | 100 |
Msa0962020 | MtrunA17_Chr3g0113031 | 49.485 | 97 | 34 | 3 | 76 | 162 | 5 | 96 | 1.89e-24 | 98.2 |
Msa0962020 | MtrunA17_Chr8g0345741 | 42.017 | 119 | 62 | 3 | 25 | 137 | 2 | 119 | 2.75e-23 | 92.0 |
Msa0962020 | MtrunA17_Chr8g0345701 | 38.065 | 155 | 68 | 6 | 14 | 148 | 7 | 153 | 1.14e-22 | 90.9 |
Msa0962020 | MtrunA17_Chr3g0130321 | 34.132 | 167 | 76 | 7 | 12 | 156 | 5 | 159 | 4.52e-19 | 82.4 |
Msa0962020 | MtrunA17_Chr7g0251661 | 33.333 | 135 | 81 | 5 | 7 | 136 | 3 | 133 | 3.15e-18 | 79.0 |
Msa0962020 | MtrunA17_Chr7g0251671 | 32.374 | 139 | 85 | 5 | 7 | 140 | 3 | 137 | 1.46e-17 | 77.0 |
Msa0962020 | MtrunA17_Chr7g0251651 | 33.824 | 136 | 81 | 4 | 6 | 136 | 10 | 141 | 3.75e-17 | 77.0 |
Msa0962020 | MtrunA17_Chr1g0168571 | 34.722 | 144 | 81 | 5 | 22 | 154 | 13 | 154 | 9.44e-16 | 75.1 |
Msa0962020 | MtrunA17_Chr7g0274971 | 29.255 | 188 | 115 | 7 | 20 | 196 | 11 | 191 | 4.11e-15 | 71.6 |
Msa0962020 | MtrunA17_Chr3g0113011 | 48.214 | 56 | 29 | 0 | 7 | 62 | 12 | 67 | 1.04e-12 | 61.6 |
Msa0962020 | MtrunA17_Chr4g0040541 | 28.194 | 227 | 131 | 11 | 14 | 213 | 48 | 269 | 4.87e-12 | 64.3 |
Msa0962020 | MtrunA17_Chr2g0282871 | 32.653 | 147 | 71 | 8 | 14 | 138 | 53 | 193 | 9.79e-12 | 63.5 |
Msa0962020 | MtrunA17_Chr3g0113041 | 46.429 | 56 | 30 | 0 | 7 | 62 | 12 | 67 | 6.61e-11 | 57.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0962020 | AT5G13180.1 | 71.856 | 167 | 45 | 1 | 1 | 165 | 1 | 167 | 6.32e-90 | 266 |
Msa0962020 | AT2G33480.2 | 71.515 | 165 | 43 | 3 | 1 | 163 | 1 | 163 | 8.67e-84 | 251 |
Msa0962020 | AT2G33480.1 | 70.659 | 167 | 43 | 3 | 1 | 163 | 1 | 165 | 1.69e-83 | 250 |
Msa0962020 | AT1G61110.1 | 55.618 | 178 | 58 | 5 | 1 | 158 | 1 | 177 | 2.93e-57 | 185 |
Msa0962020 | AT3G04070.2 | 55.689 | 167 | 58 | 4 | 8 | 158 | 4 | 170 | 9.93e-57 | 184 |
Msa0962020 | AT1G69490.1 | 55.758 | 165 | 61 | 3 | 14 | 168 | 9 | 171 | 2.00e-56 | 181 |
Msa0962020 | AT1G77450.1 | 48.259 | 201 | 90 | 4 | 10 | 200 | 6 | 202 | 4.08e-55 | 177 |
Msa0962020 | AT1G65910.1 | 43.723 | 231 | 111 | 6 | 12 | 232 | 4 | 225 | 9.81e-55 | 185 |
Msa0962020 | AT3G04070.1 | 51.366 | 183 | 57 | 4 | 8 | 158 | 4 | 186 | 1.20e-54 | 179 |
Msa0962020 | AT3G15510.1 | 56.962 | 158 | 51 | 3 | 18 | 158 | 21 | 178 | 4.66e-54 | 178 |
Msa0962020 | AT3G03200.1 | 43.891 | 221 | 107 | 4 | 12 | 217 | 4 | 222 | 2.52e-53 | 179 |
Msa0962020 | AT5G17260.1 | 50.289 | 173 | 75 | 3 | 12 | 175 | 4 | 174 | 4.57e-53 | 178 |
Msa0962020 | AT2G24430.2 | 54.487 | 156 | 66 | 2 | 8 | 158 | 10 | 165 | 7.05e-53 | 173 |
Msa0962020 | AT2G24430.1 | 54.487 | 156 | 66 | 2 | 8 | 158 | 10 | 165 | 7.05e-53 | 173 |
Msa0962020 | AT5G07680.1 | 52.500 | 160 | 66 | 4 | 11 | 162 | 14 | 171 | 1.10e-52 | 173 |
Msa0962020 | AT5G61430.1 | 53.750 | 160 | 64 | 5 | 11 | 162 | 13 | 170 | 1.45e-52 | 173 |
Msa0962020 | AT5G07680.2 | 53.503 | 157 | 63 | 4 | 14 | 162 | 3 | 157 | 1.73e-52 | 172 |
Msa0962020 | AT1G33280.1 | 52.632 | 152 | 64 | 2 | 14 | 159 | 8 | 157 | 2.07e-52 | 172 |
Msa0962020 | AT4G27410.2 | 54.140 | 157 | 64 | 3 | 11 | 161 | 11 | 165 | 2.77e-52 | 171 |
Msa0962020 | AT1G12260.2 | 52.500 | 160 | 66 | 5 | 14 | 166 | 7 | 163 | 3.18e-52 | 172 |
Msa0962020 | AT1G54330.1 | 57.143 | 154 | 55 | 3 | 12 | 158 | 4 | 153 | 3.58e-52 | 171 |
Msa0962020 | AT5G39610.1 | 51.875 | 160 | 67 | 3 | 12 | 163 | 18 | 175 | 3.77e-52 | 171 |
Msa0962020 | AT1G62700.1 | 52.174 | 161 | 68 | 4 | 13 | 166 | 6 | 164 | 5.13e-52 | 173 |
Msa0962020 | AT1G62700.2 | 52.174 | 161 | 68 | 4 | 13 | 166 | 6 | 164 | 5.13e-52 | 173 |
Msa0962020 | AT4G10350.1 | 52.727 | 165 | 65 | 5 | 4 | 159 | 1 | 161 | 7.72e-52 | 171 |
Msa0962020 | AT1G12260.1 | 52.500 | 160 | 66 | 5 | 14 | 166 | 7 | 163 | 1.03e-51 | 172 |
Msa0962020 | AT3G15170.1 | 50.303 | 165 | 72 | 4 | 11 | 167 | 17 | 179 | 1.67e-51 | 170 |
Msa0962020 | AT1G01720.1 | 55.152 | 165 | 59 | 5 | 12 | 166 | 5 | 164 | 4.27e-51 | 168 |
Msa0962020 | AT3G18400.1 | 54.248 | 153 | 63 | 4 | 11 | 158 | 2 | 152 | 4.44e-51 | 169 |
Msa0962020 | AT5G46590.1 | 51.266 | 158 | 67 | 3 | 10 | 158 | 2 | 158 | 9.94e-51 | 167 |
Msa0962020 | AT5G53950.1 | 49.189 | 185 | 83 | 4 | 14 | 187 | 17 | 201 | 1.02e-50 | 169 |
Msa0962020 | AT2G18060.3 | 41.453 | 234 | 117 | 7 | 14 | 236 | 9 | 233 | 1.37e-50 | 169 |
Msa0962020 | AT2G18060.1 | 41.453 | 234 | 117 | 7 | 14 | 236 | 9 | 233 | 1.37e-50 | 169 |
Msa0962020 | AT5G66300.1 | 51.515 | 165 | 68 | 5 | 4 | 159 | 2 | 163 | 3.46e-50 | 166 |
Msa0962020 | AT5G62380.2 | 53.846 | 156 | 61 | 5 | 12 | 159 | 5 | 157 | 4.94e-50 | 167 |
Msa0962020 | AT5G62380.1 | 53.846 | 156 | 61 | 5 | 12 | 159 | 5 | 157 | 4.94e-50 | 167 |
Msa0962020 | AT1G76420.1 | 52.597 | 154 | 66 | 3 | 11 | 158 | 19 | 171 | 5.20e-50 | 166 |
Msa0962020 | AT3G12977.1 | 47.594 | 187 | 86 | 7 | 11 | 189 | 15 | 197 | 7.81e-50 | 164 |
Msa0962020 | AT3G04060.1 | 53.548 | 155 | 63 | 4 | 12 | 158 | 18 | 171 | 1.26e-49 | 166 |
Msa0962020 | AT4G27410.3 | 48.851 | 174 | 64 | 3 | 11 | 161 | 11 | 182 | 1.35e-49 | 165 |
Msa0962020 | AT5G18270.2 | 52.258 | 155 | 65 | 3 | 12 | 158 | 19 | 172 | 1.56e-49 | 165 |
Msa0962020 | AT3G17730.1 | 50.968 | 155 | 66 | 3 | 12 | 158 | 4 | 156 | 1.63e-49 | 162 |
Msa0962020 | AT1G52890.1 | 52.903 | 155 | 65 | 3 | 11 | 159 | 11 | 163 | 2.87e-49 | 164 |
Msa0962020 | AT5G18270.1 | 52.258 | 155 | 65 | 3 | 12 | 158 | 19 | 172 | 3.52e-49 | 164 |
Msa0962020 | AT5G63790.1 | 47.236 | 199 | 81 | 6 | 10 | 195 | 46 | 233 | 3.96e-49 | 164 |
Msa0962020 | AT5G63790.2 | 47.236 | 199 | 81 | 6 | 10 | 195 | 56 | 243 | 4.89e-49 | 164 |
Msa0962020 | AT1G71930.2 | 50.000 | 152 | 67 | 3 | 14 | 158 | 9 | 158 | 6.94e-49 | 163 |
Msa0962020 | AT1G71930.1 | 50.000 | 152 | 67 | 3 | 14 | 158 | 9 | 158 | 6.94e-49 | 163 |
Msa0962020 | AT4G36160.2 | 47.159 | 176 | 82 | 4 | 1 | 167 | 1 | 174 | 9.95e-49 | 164 |
Msa0962020 | AT4G36160.1 | 49.693 | 163 | 71 | 4 | 14 | 167 | 10 | 170 | 1.15e-48 | 164 |
Msa0962020 | AT4G36160.3 | 49.693 | 163 | 71 | 4 | 14 | 167 | 10 | 170 | 1.15e-48 | 164 |
Msa0962020 | AT1G79580.3 | 50.318 | 157 | 69 | 3 | 10 | 159 | 13 | 167 | 1.59e-48 | 164 |
Msa0962020 | AT1G79580.5 | 50.318 | 157 | 69 | 3 | 10 | 159 | 13 | 167 | 1.59e-48 | 164 |
Msa0962020 | AT1G79580.4 | 50.318 | 157 | 69 | 3 | 10 | 159 | 13 | 167 | 1.59e-48 | 164 |
Msa0962020 | AT1G79580.2 | 50.318 | 157 | 69 | 3 | 10 | 159 | 13 | 167 | 1.59e-48 | 164 |
Msa0962020 | AT1G79580.1 | 50.318 | 157 | 69 | 3 | 10 | 159 | 13 | 167 | 1.59e-48 | 164 |
Msa0962020 | AT1G33060.1 | 52.941 | 153 | 62 | 3 | 14 | 158 | 24 | 174 | 1.62e-48 | 169 |
Msa0962020 | AT1G33060.2 | 52.941 | 153 | 62 | 3 | 14 | 158 | 24 | 174 | 1.76e-48 | 169 |
Msa0962020 | AT1G52880.1 | 53.704 | 162 | 59 | 3 | 18 | 163 | 21 | 182 | 2.04e-48 | 162 |
Msa0962020 | AT4G35580.1 | 45.366 | 205 | 90 | 5 | 14 | 210 | 9 | 199 | 3.83e-48 | 166 |
Msa0962020 | AT4G35580.3 | 45.366 | 205 | 90 | 5 | 14 | 210 | 9 | 199 | 4.52e-48 | 166 |
Msa0962020 | AT4G35580.2 | 45.366 | 205 | 90 | 5 | 14 | 210 | 9 | 199 | 4.84e-48 | 166 |
Msa0962020 | AT3G15500.1 | 52.258 | 155 | 66 | 3 | 11 | 159 | 11 | 163 | 1.92e-47 | 159 |
Msa0962020 | AT1G56010.2 | 44.149 | 188 | 85 | 5 | 11 | 188 | 16 | 193 | 2.33e-47 | 159 |
Msa0962020 | AT5G46590.2 | 50.345 | 145 | 66 | 2 | 10 | 149 | 2 | 145 | 3.17e-47 | 158 |
Msa0962020 | AT3G61910.1 | 44.633 | 177 | 74 | 5 | 4 | 158 | 1 | 175 | 3.72e-47 | 159 |
Msa0962020 | AT2G46770.1 | 45.000 | 180 | 75 | 4 | 2 | 159 | 4 | 181 | 4.05e-47 | 160 |
Msa0962020 | AT1G32770.1 | 43.956 | 182 | 81 | 4 | 3 | 165 | 5 | 184 | 4.96e-47 | 159 |
Msa0962020 | AT4G17980.1 | 47.170 | 159 | 74 | 2 | 10 | 158 | 2 | 160 | 5.89e-47 | 156 |
Msa0962020 | AT5G08790.1 | 52.795 | 161 | 60 | 5 | 11 | 159 | 4 | 160 | 6.94e-47 | 157 |
Msa0962020 | AT4G17980.2 | 47.170 | 159 | 74 | 2 | 10 | 158 | 2 | 160 | 8.78e-47 | 157 |
Msa0962020 | AT3G10490.1 | 51.948 | 154 | 63 | 3 | 14 | 158 | 27 | 178 | 9.61e-47 | 155 |
Msa0962020 | AT3G10480.1 | 51.899 | 158 | 65 | 3 | 14 | 162 | 27 | 182 | 1.25e-46 | 160 |
Msa0962020 | AT3G29035.1 | 47.191 | 178 | 82 | 4 | 11 | 180 | 21 | 194 | 1.30e-46 | 157 |
Msa0962020 | AT2G33480.3 | 68.571 | 105 | 28 | 2 | 59 | 160 | 3 | 105 | 1.59e-46 | 154 |
Msa0962020 | AT3G10480.2 | 51.592 | 157 | 66 | 3 | 14 | 162 | 27 | 181 | 1.77e-45 | 157 |
Msa0962020 | AT3G10500.1 | 49.080 | 163 | 73 | 3 | 14 | 168 | 9 | 169 | 3.98e-45 | 158 |
Msa0962020 | AT5G04410.1 | 50.307 | 163 | 71 | 3 | 14 | 168 | 9 | 169 | 6.91e-45 | 158 |
Msa0962020 | AT3G10490.2 | 51.266 | 158 | 66 | 3 | 14 | 162 | 27 | 182 | 6.99e-45 | 156 |
Msa0962020 | AT5G39820.1 | 41.584 | 202 | 91 | 3 | 2 | 176 | 8 | 209 | 4.78e-44 | 151 |
Msa0962020 | AT1G26870.1 | 39.381 | 226 | 113 | 6 | 14 | 215 | 16 | 241 | 3.54e-43 | 150 |
Msa0962020 | AT4G28530.1 | 44.633 | 177 | 78 | 4 | 7 | 164 | 3 | 178 | 4.05e-43 | 149 |
Msa0962020 | AT3G49530.2 | 39.130 | 230 | 111 | 7 | 14 | 220 | 13 | 236 | 2.55e-42 | 148 |
Msa0962020 | AT3G49530.1 | 39.130 | 230 | 111 | 7 | 14 | 220 | 13 | 236 | 4.55e-42 | 149 |
Msa0962020 | AT3G10480.3 | 42.932 | 191 | 65 | 3 | 14 | 162 | 27 | 215 | 6.22e-42 | 149 |
Msa0962020 | AT1G32510.1 | 45.029 | 171 | 79 | 4 | 14 | 170 | 6 | 175 | 9.73e-42 | 144 |
Msa0962020 | AT1G34180.3 | 48.765 | 162 | 71 | 4 | 16 | 168 | 18 | 176 | 3.73e-41 | 146 |
Msa0962020 | AT2G17040.1 | 49.660 | 147 | 68 | 3 | 16 | 158 | 8 | 152 | 4.98e-41 | 142 |
Msa0962020 | AT5G24590.2 | 44.751 | 181 | 80 | 5 | 14 | 179 | 13 | 188 | 5.86e-41 | 145 |
Msa0962020 | AT1G34190.1 | 49.080 | 163 | 69 | 5 | 16 | 168 | 18 | 176 | 6.13e-41 | 147 |
Msa0962020 | AT5G64060.1 | 42.708 | 192 | 88 | 4 | 10 | 193 | 2 | 179 | 9.04e-41 | 143 |
Msa0962020 | AT1G34180.1 | 48.765 | 162 | 71 | 4 | 16 | 168 | 18 | 176 | 1.95e-40 | 146 |
Msa0962020 | AT1G34180.4 | 45.402 | 174 | 71 | 4 | 16 | 168 | 18 | 188 | 4.85e-40 | 143 |
Msa0962020 | AT2G02450.1 | 50.000 | 150 | 69 | 4 | 16 | 161 | 53 | 200 | 9.41e-40 | 141 |
Msa0962020 | AT2G43000.1 | 48.649 | 148 | 67 | 4 | 16 | 156 | 20 | 165 | 1.19e-39 | 138 |
Msa0962020 | AT2G02450.2 | 50.000 | 150 | 69 | 4 | 16 | 161 | 53 | 200 | 1.24e-39 | 141 |
Msa0962020 | AT1G34180.2 | 45.402 | 174 | 71 | 4 | 16 | 168 | 18 | 188 | 1.81e-39 | 143 |
Msa0962020 | AT3G12910.1 | 46.584 | 161 | 66 | 5 | 16 | 156 | 23 | 183 | 3.00e-39 | 138 |
Msa0962020 | AT5G09330.5 | 39.732 | 224 | 101 | 6 | 10 | 224 | 2 | 200 | 7.96e-38 | 138 |
Msa0962020 | AT5G09330.2 | 39.732 | 224 | 101 | 6 | 10 | 224 | 2 | 200 | 7.96e-38 | 138 |
Msa0962020 | AT5G09330.4 | 39.732 | 224 | 101 | 6 | 10 | 224 | 2 | 200 | 7.96e-38 | 138 |
Msa0962020 | AT5G09330.3 | 39.732 | 224 | 101 | 6 | 10 | 224 | 2 | 200 | 7.96e-38 | 138 |
Msa0962020 | AT5G09330.1 | 39.732 | 224 | 101 | 6 | 10 | 224 | 2 | 200 | 7.96e-38 | 138 |
Msa0962020 | AT5G22290.1 | 40.331 | 181 | 95 | 5 | 16 | 191 | 23 | 195 | 3.43e-37 | 133 |
Msa0962020 | AT2G27300.1 | 44.521 | 146 | 71 | 3 | 14 | 155 | 14 | 153 | 3.25e-36 | 130 |
Msa0962020 | AT3G44290.2 | 43.750 | 144 | 71 | 3 | 16 | 155 | 16 | 153 | 9.38e-36 | 127 |
Msa0962020 | AT3G44290.1 | 43.750 | 144 | 71 | 3 | 16 | 155 | 16 | 153 | 9.76e-35 | 127 |
Msa0962020 | AT5G04395.1 | 43.537 | 147 | 66 | 2 | 10 | 139 | 24 | 170 | 1.37e-34 | 122 |
Msa0962020 | AT4G10350.2 | 54.545 | 99 | 40 | 2 | 64 | 159 | 18 | 114 | 1.23e-33 | 123 |
Msa0962020 | AT5G64530.1 | 40.244 | 164 | 68 | 4 | 12 | 156 | 1 | 153 | 3.56e-32 | 116 |
Msa0962020 | AT5G61430.2 | 53.846 | 104 | 41 | 3 | 64 | 162 | 6 | 107 | 7.65e-32 | 117 |
Msa0962020 | AT5G64530.2 | 45.736 | 129 | 57 | 3 | 12 | 138 | 1 | 118 | 1.48e-31 | 114 |
Msa0962020 | AT3G12977.2 | 45.736 | 129 | 63 | 4 | 65 | 189 | 19 | 144 | 9.90e-31 | 114 |
Msa0962020 | AT1G56010.1 | 44.882 | 127 | 54 | 3 | 68 | 188 | 10 | 126 | 2.57e-30 | 113 |
Msa0962020 | AT1G32870.2 | 45.349 | 172 | 78 | 5 | 7 | 168 | 5 | 170 | 2.95e-30 | 117 |
Msa0962020 | AT1G32870.1 | 45.349 | 172 | 78 | 5 | 7 | 168 | 5 | 170 | 2.98e-30 | 117 |
Msa0962020 | AT1G32870.3 | 45.349 | 172 | 78 | 5 | 7 | 168 | 41 | 206 | 3.69e-30 | 117 |
Msa0962020 | AT5G14000.1 | 36.747 | 166 | 98 | 4 | 6 | 168 | 7 | 168 | 9.66e-29 | 108 |
Msa0962020 | AT5G14000.2 | 39.456 | 147 | 84 | 3 | 7 | 150 | 8 | 152 | 1.89e-28 | 105 |
Msa0962020 | AT1G02230.1 | 42.105 | 152 | 76 | 6 | 15 | 158 | 4 | 151 | 7.39e-28 | 109 |
Msa0962020 | AT5G50820.1 | 41.259 | 143 | 76 | 4 | 5 | 144 | 7 | 144 | 9.35e-28 | 105 |
Msa0962020 | AT4G01550.1 | 35.484 | 186 | 101 | 5 | 17 | 195 | 7 | 180 | 5.81e-27 | 108 |
Msa0962020 | AT1G02250.1 | 42.105 | 152 | 76 | 5 | 15 | 158 | 4 | 151 | 2.91e-26 | 105 |
Msa0962020 | AT4G01520.1 | 38.509 | 161 | 89 | 5 | 15 | 167 | 5 | 163 | 4.22e-26 | 103 |
Msa0962020 | AT4G01540.4 | 38.994 | 159 | 87 | 5 | 17 | 167 | 7 | 163 | 1.19e-25 | 103 |
Msa0962020 | AT4G01540.3 | 38.994 | 159 | 87 | 5 | 17 | 167 | 7 | 163 | 1.65e-25 | 103 |
Msa0962020 | AT4G01540.2 | 38.994 | 159 | 87 | 5 | 17 | 167 | 7 | 163 | 1.93e-25 | 103 |
Msa0962020 | AT4G01540.1 | 38.994 | 159 | 87 | 5 | 17 | 167 | 7 | 163 | 2.45e-25 | 103 |
Msa0962020 | AT3G44350.2 | 33.628 | 226 | 121 | 8 | 17 | 218 | 8 | 228 | 7.43e-25 | 99.0 |
Msa0962020 | AT5G22380.1 | 38.462 | 156 | 79 | 5 | 17 | 157 | 8 | 161 | 4.70e-24 | 96.7 |
Msa0962020 | AT3G04420.2 | 38.411 | 151 | 82 | 5 | 15 | 158 | 4 | 150 | 3.19e-23 | 95.5 |
Msa0962020 | AT3G04420.1 | 38.411 | 151 | 82 | 5 | 15 | 158 | 4 | 150 | 4.37e-23 | 95.9 |
Msa0962020 | AT3G44350.1 | 39.568 | 139 | 73 | 4 | 14 | 143 | 5 | 141 | 5.99e-23 | 91.7 |
Msa0962020 | AT2G18060.2 | 50.000 | 82 | 38 | 2 | 89 | 169 | 2 | 81 | 8.99e-22 | 91.3 |
Msa0962020 | AT4G28530.2 | 32.768 | 177 | 62 | 4 | 7 | 164 | 3 | 141 | 3.93e-21 | 90.5 |
Msa0962020 | AT1G02220.1 | 37.179 | 156 | 72 | 7 | 15 | 157 | 4 | 146 | 4.59e-21 | 91.3 |
Msa0962020 | AT3G10490.4 | 49.398 | 83 | 36 | 2 | 84 | 162 | 2 | 82 | 1.94e-19 | 86.3 |
Msa0962020 | AT3G10490.3 | 49.398 | 83 | 36 | 2 | 84 | 162 | 2 | 82 | 1.94e-19 | 86.3 |
Msa0962020 | AT2G43000.2 | 48.235 | 85 | 38 | 3 | 76 | 156 | 5 | 87 | 7.25e-18 | 79.3 |
Msa0962020 | AT1G01010.1 | 35.443 | 158 | 79 | 7 | 17 | 158 | 6 | 156 | 5.33e-17 | 79.7 |
Msa0962020 | AT3G55210.1 | 32.948 | 173 | 88 | 8 | 14 | 165 | 11 | 176 | 9.28e-17 | 77.8 |
Msa0962020 | AT5G22290.2 | 40.777 | 103 | 52 | 4 | 90 | 191 | 2 | 96 | 5.90e-15 | 72.0 |
Msa0962020 | AT3G56530.1 | 32.911 | 158 | 89 | 7 | 11 | 157 | 49 | 200 | 2.06e-14 | 71.6 |
Msa0962020 | AT5G14000.3 | 54.545 | 55 | 25 | 0 | 7 | 61 | 8 | 62 | 9.02e-13 | 66.2 |
Msa0962020 | AT4G29230.3 | 30.387 | 181 | 95 | 9 | 12 | 165 | 46 | 222 | 7.02e-12 | 64.7 |
Msa0962020 | AT4G29230.1 | 30.387 | 181 | 95 | 9 | 12 | 165 | 46 | 222 | 9.14e-12 | 64.7 |
Msa0962020 | AT4G29230.2 | 30.387 | 181 | 95 | 9 | 12 | 165 | 45 | 221 | 9.48e-12 | 64.7 |
Msa0962020 | AT5G56620.1 | 31.210 | 157 | 75 | 7 | 12 | 138 | 41 | 194 | 1.58e-11 | 63.5 |
Msa0962020 | AT5G56620.3 | 31.210 | 157 | 75 | 7 | 12 | 138 | 41 | 194 | 1.63e-11 | 63.5 |
Msa0962020 | AT5G56620.2 | 31.210 | 157 | 75 | 7 | 12 | 138 | 41 | 194 | 1.71e-11 | 63.5 |
Msa0962020 | AT1G28470.1 | 31.792 | 173 | 92 | 11 | 14 | 164 | 77 | 245 | 1.81e-11 | 63.2 |
Msa0962020 | AT4G28500.1 | 29.670 | 182 | 100 | 9 | 14 | 171 | 59 | 236 | 7.36e-11 | 61.2 |
Find 50 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAACCCCTTGAATGAAAAT+TGG | 0.154078 | 6_3:-84702286 | Msa0962020:CDS |
CCAAGCAGTGGCAGCAGTTT+TGG | 0.254576 | 6_3:-84702191 | Msa0962020:CDS |
TAGACAGACCTAATAATAAA+AGG | 0.323180 | 6_3:+84702010 | None:intergenic |
CTCTTCAATCACAAATGAAT+TGG | 0.329188 | 6_3:-84702081 | Msa0962020:CDS |
CTGTCAGATCGGTTCCCATT+TGG | 0.351135 | 6_3:+84702482 | None:intergenic |
CAACCCCTTGAATGAAAATT+GGG | 0.357689 | 6_3:-84702285 | Msa0962020:CDS |
GAGGTACAAACTCTGGTTAC+TGG | 0.358242 | 6_3:-84702460 | Msa0962020:CDS |
ATCTTTGCAAGTCTGATCCT+TGG | 0.370348 | 6_3:-84702731 | Msa0962020:CDS |
TCGGTTCCCATTTGGATACT+TGG | 0.390108 | 6_3:+84702490 | None:intergenic |
TCTTTGCAAGTCTGATCCTT+GGG | 0.393386 | 6_3:-84702730 | Msa0962020:CDS |
TCAAAGACTCATGAAGTTGT+TGG | 0.413398 | 6_3:-84702404 | Msa0962020:CDS |
AAAGAAGCCAAGTATCCAAA+TGG | 0.440359 | 6_3:-84702497 | Msa0962020:CDS |
ACTTCAGGAATGATGGAAAC+AGG | 0.442694 | 6_3:+84702756 | None:intergenic |
TCTGGTTACTGGAAAGCAAC+TGG | 0.454286 | 6_3:-84702449 | Msa0962020:CDS |
AAGATCAACTTCAGGAATGA+TGG | 0.456137 | 6_3:+84702749 | None:intergenic |
CTCAGATTCAAGTTCAAAAG+TGG | 0.459591 | 6_3:-84702153 | Msa0962020:CDS |
TTACTGGAAAGCAACTGGTT+TGG | 0.462280 | 6_3:-84702444 | Msa0962020:CDS |
ACAACAAGTTCTTCATCTGT+TGG | 0.464543 | 6_3:+84702816 | None:intergenic |
GACTTGCAAAGATCAACTTC+AGG | 0.465462 | 6_3:+84702741 | None:intergenic |
CTTCATCTGTTGGATGGAAA+CGG | 0.472612 | 6_3:+84702826 | None:intergenic |
CCAAAACTGCTGCCACTGCT+TGG | 0.485586 | 6_3:+84702191 | None:intergenic |
TTCATTTGTGATTGAAGAGG+AGG | 0.501069 | 6_3:+84702085 | None:intergenic |
CAAGTTCTTCATCTGTTGGA+TGG | 0.505979 | 6_3:+84702820 | None:intergenic |
GGTTGGAGTGAGAGGAAGTG+AGG | 0.514880 | 6_3:+84702303 | None:intergenic |
CAGACCTAATAATAAAAGGA+TGG | 0.518055 | 6_3:+84702014 | None:intergenic |
CAATTCATTTGTGATTGAAG+AGG | 0.539046 | 6_3:+84702082 | None:intergenic |
TAGGTGATATGGAACAAGAA+AGG | 0.539726 | 6_3:-84702535 | Msa0962020:CDS |
AAGAAGCCAAGTATCCAAAT+GGG | 0.544681 | 6_3:-84702496 | Msa0962020:CDS |
CTCATGGTTCAAGAACTGAT+TGG | 0.548704 | 6_3:-84702343 | Msa0962020:CDS |
TGTGTCGCATATTTCTGAAG+AGG | 0.550703 | 6_3:-84702259 | Msa0962020:CDS |
TGTTCAATACTTGAAGCGTA+AGG | 0.553435 | 6_3:-84702796 | Msa0962020:CDS |
ATTCAAGGGGTTGGAGTGAG+AGG | 0.553608 | 6_3:+84702295 | None:intergenic |
AGACCTAATAATAAAAGGAT+GGG | 0.565706 | 6_3:+84702015 | None:intergenic |
AATCGAGAGGAGACAGTGAA+AGG | 0.569341 | 6_3:-84702221 | Msa0962020:CDS |
TCTGATCCTTGGGATTTACC+TGG | 0.570788 | 6_3:-84702720 | Msa0962020:intron |
TACAGAGGCAAACCACCTCA+TGG | 0.581454 | 6_3:-84702359 | Msa0962020:CDS |
GGAATGATGGAAACAGGTAA+AGG | 0.582679 | 6_3:+84702762 | None:intergenic |
TCTGACAGAGGTACAAACTC+TGG | 0.582841 | 6_3:-84702467 | Msa0962020:CDS |
AGTTTGTACCTCTGTCAGAT+CGG | 0.588797 | 6_3:+84702471 | None:intergenic |
GTTGGATGGAAACGGAAACC+TGG | 0.589751 | 6_3:+84702834 | None:intergenic |
AAAGGAGTGAAGCCAAGCAG+TGG | 0.603258 | 6_3:-84702203 | Msa0962020:CDS |
CGCATATTTCTGAAGAGGAG+AGG | 0.611502 | 6_3:-84702254 | Msa0962020:CDS |
TCAGTTCTTGAACCATGAGG+TGG | 0.615010 | 6_3:+84702347 | None:intergenic |
TACATACCAGGTAAATCCCA+AGG | 0.624010 | 6_3:+84702714 | None:intergenic |
GGTGAAGTTAGATTGCCACC+AGG | 0.651695 | 6_3:-84702852 | Msa0962020:CDS |
AGGTGGTGCTATAAATCGAG+AGG | 0.661415 | 6_3:-84702234 | Msa0962020:CDS |
ATATTTCTGAAGAGGAGAGG+TGG | 0.674268 | 6_3:-84702251 | Msa0962020:CDS |
CAATCAGTTCTTGAACCATG+AGG | 0.707588 | 6_3:+84702344 | None:intergenic |
AATGGGAACCGATCTGACAG+AGG | 0.720450 | 6_3:-84702479 | Msa0962020:CDS |
GGATGGAAACGGAAACCTGG+TGG | 0.781347 | 6_3:+84702837 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATGAATTTTGTGAAGAA+TGG | - | chr6_3:84702025-84702044 | Msa0962020:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | + | chr6_3:84702211-84702230 | None:intergenic | 25.0% |
!! | AAAACCCAATTTTCATTCAA+GGG | + | chr6_3:84702620-84702639 | None:intergenic | 25.0% |
!! | AAGATGAATTTTGTGAAGAA+TGG | - | chr6_3:84702025-84702044 | Msa0962020:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | + | chr6_3:84702211-84702230 | None:intergenic | 25.0% |
!! | AAAACCCAATTTTCATTCAA+GGG | + | chr6_3:84702620-84702639 | None:intergenic | 25.0% |
!!! | AAAACTCTTGTTTTCTACAG+AGG | - | chr6_3:84702524-84702543 | Msa0962020:CDS | 30.0% |
! | AAACCCAATTTTCATTCAAG+GGG | + | chr6_3:84702619-84702638 | None:intergenic | 30.0% |
! | CAAAACCCAATTTTCATTCA+AGG | + | chr6_3:84702621-84702640 | None:intergenic | 30.0% |
CAATTCATTTGTGATTGAAG+AGG | + | chr6_3:84702819-84702838 | None:intergenic | 30.0% | |
CTCTTCAATCACAAATGAAT+TGG | - | chr6_3:84702817-84702836 | Msa0962020:CDS | 30.0% | |
!!! | AAAACTCTTGTTTTCTACAG+AGG | - | chr6_3:84702524-84702543 | Msa0962020:CDS | 30.0% |
! | AAACCCAATTTTCATTCAAG+GGG | + | chr6_3:84702619-84702638 | None:intergenic | 30.0% |
! | CAAAACCCAATTTTCATTCA+AGG | + | chr6_3:84702621-84702640 | None:intergenic | 30.0% |
CAATTCATTTGTGATTGAAG+AGG | + | chr6_3:84702819-84702838 | None:intergenic | 30.0% | |
CTCTTCAATCACAAATGAAT+TGG | - | chr6_3:84702817-84702836 | Msa0962020:CDS | 30.0% | |
ACAACAAGTTCTTCATCTGT+TGG | + | chr6_3:84702085-84702104 | None:intergenic | 35.0% | |
TGTTCAATACTTGAAGCGTA+AGG | - | chr6_3:84702102-84702121 | Msa0962020:CDS | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | + | chr6_3:84702152-84702171 | None:intergenic | 35.0% | |
GAAAAGAAAGGTTACATACC+AGG | + | chr6_3:84702199-84702218 | None:intergenic | 35.0% | |
TAGAAGAAGTTAGCATGTTC+CGG | + | chr6_3:84702294-84702313 | None:intergenic | 35.0% | |
!! | TGGTGTTCTTTTAGGTGATA+TGG | - | chr6_3:84702352-84702371 | Msa0962020:CDS | 35.0% |
TAGGTGATATGGAACAAGAA+AGG | - | chr6_3:84702363-84702382 | Msa0962020:CDS | 35.0% | |
AAAGAAGCCAAGTATCCAAA+TGG | - | chr6_3:84702401-84702420 | Msa0962020:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | - | chr6_3:84702402-84702421 | Msa0962020:CDS | 35.0% | |
TCAAAGACTCATGAAGTTGT+TGG | - | chr6_3:84702494-84702513 | Msa0962020:CDS | 35.0% | |
CAACCCCTTGAATGAAAATT+GGG | - | chr6_3:84702613-84702632 | Msa0962020:intron | 35.0% | |
! | CTCAGATTCAAGTTCAAAAG+TGG | - | chr6_3:84702745-84702764 | Msa0962020:CDS | 35.0% |
TTCATTTGTGATTGAAGAGG+AGG | + | chr6_3:84702816-84702835 | None:intergenic | 35.0% | |
ACAACAAGTTCTTCATCTGT+TGG | + | chr6_3:84702085-84702104 | None:intergenic | 35.0% | |
TGTTCAATACTTGAAGCGTA+AGG | - | chr6_3:84702102-84702121 | Msa0962020:CDS | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | + | chr6_3:84702152-84702171 | None:intergenic | 35.0% | |
GAAAAGAAAGGTTACATACC+AGG | + | chr6_3:84702199-84702218 | None:intergenic | 35.0% | |
TAGAAGAAGTTAGCATGTTC+CGG | + | chr6_3:84702294-84702313 | None:intergenic | 35.0% | |
!! | TGGTGTTCTTTTAGGTGATA+TGG | - | chr6_3:84702352-84702371 | Msa0962020:CDS | 35.0% |
TAGGTGATATGGAACAAGAA+AGG | - | chr6_3:84702363-84702382 | Msa0962020:CDS | 35.0% | |
AAAGAAGCCAAGTATCCAAA+TGG | - | chr6_3:84702401-84702420 | Msa0962020:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | - | chr6_3:84702402-84702421 | Msa0962020:CDS | 35.0% | |
TCAAAGACTCATGAAGTTGT+TGG | - | chr6_3:84702494-84702513 | Msa0962020:CDS | 35.0% | |
CAACCCCTTGAATGAAAATT+GGG | - | chr6_3:84702613-84702632 | Msa0962020:intron | 35.0% | |
! | CTCAGATTCAAGTTCAAAAG+TGG | - | chr6_3:84702745-84702764 | Msa0962020:CDS | 35.0% |
TTCATTTGTGATTGAAGAGG+AGG | + | chr6_3:84702816-84702835 | None:intergenic | 35.0% | |
CTTCATCTGTTGGATGGAAA+CGG | + | chr6_3:84702075-84702094 | None:intergenic | 40.0% | |
CAAGTTCTTCATCTGTTGGA+TGG | + | chr6_3:84702081-84702100 | None:intergenic | 40.0% | |
! | GGAATGATGGAAACAGGTAA+AGG | + | chr6_3:84702139-84702158 | None:intergenic | 40.0% |
! | ACTTCAGGAATGATGGAAAC+AGG | + | chr6_3:84702145-84702164 | None:intergenic | 40.0% |
GACTTGCAAAGATCAACTTC+AGG | + | chr6_3:84702160-84702179 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+TGG | - | chr6_3:84702167-84702186 | Msa0962020:CDS | 40.0% | |
TCTTTGCAAGTCTGATCCTT+GGG | - | chr6_3:84702168-84702187 | Msa0962020:CDS | 40.0% | |
TACATACCAGGTAAATCCCA+AGG | + | chr6_3:84702187-84702206 | None:intergenic | 40.0% | |
CTACTGCAAACAATGTCATG+TGG | - | chr6_3:84702314-84702333 | Msa0962020:CDS | 40.0% | |
AGTTTGTACCTCTGTCAGAT+CGG | + | chr6_3:84702430-84702449 | None:intergenic | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | - | chr6_3:84702454-84702473 | Msa0962020:CDS | 40.0% | |
CAATCAGTTCTTGAACCATG+AGG | + | chr6_3:84702557-84702576 | None:intergenic | 40.0% | |
CTCATGGTTCAAGAACTGAT+TGG | - | chr6_3:84702555-84702574 | Msa0962020:intron | 40.0% | |
! | CCAATTTTCATTCAAGGGGT+TGG | + | chr6_3:84702615-84702634 | None:intergenic | 40.0% |
CCAACCCCTTGAATGAAAAT+TGG | - | chr6_3:84702612-84702631 | Msa0962020:intron | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | - | chr6_3:84702639-84702658 | Msa0962020:intron | 40.0% |
! | ATATTTCTGAAGAGGAGAGG+TGG | - | chr6_3:84702647-84702666 | Msa0962020:intron | 40.0% |
CTTCATCTGTTGGATGGAAA+CGG | + | chr6_3:84702075-84702094 | None:intergenic | 40.0% | |
CAAGTTCTTCATCTGTTGGA+TGG | + | chr6_3:84702081-84702100 | None:intergenic | 40.0% | |
! | GGAATGATGGAAACAGGTAA+AGG | + | chr6_3:84702139-84702158 | None:intergenic | 40.0% |
! | ACTTCAGGAATGATGGAAAC+AGG | + | chr6_3:84702145-84702164 | None:intergenic | 40.0% |
GACTTGCAAAGATCAACTTC+AGG | + | chr6_3:84702160-84702179 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+TGG | - | chr6_3:84702167-84702186 | Msa0962020:CDS | 40.0% | |
TCTTTGCAAGTCTGATCCTT+GGG | - | chr6_3:84702168-84702187 | Msa0962020:CDS | 40.0% | |
TACATACCAGGTAAATCCCA+AGG | + | chr6_3:84702187-84702206 | None:intergenic | 40.0% | |
CTACTGCAAACAATGTCATG+TGG | - | chr6_3:84702314-84702333 | Msa0962020:CDS | 40.0% | |
AGTTTGTACCTCTGTCAGAT+CGG | + | chr6_3:84702430-84702449 | None:intergenic | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | - | chr6_3:84702454-84702473 | Msa0962020:CDS | 40.0% | |
CAATCAGTTCTTGAACCATG+AGG | + | chr6_3:84702557-84702576 | None:intergenic | 40.0% | |
CTCATGGTTCAAGAACTGAT+TGG | - | chr6_3:84702555-84702574 | Msa0962020:intron | 40.0% | |
! | CCAATTTTCATTCAAGGGGT+TGG | + | chr6_3:84702615-84702634 | None:intergenic | 40.0% |
CCAACCCCTTGAATGAAAAT+TGG | - | chr6_3:84702612-84702631 | Msa0962020:intron | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | - | chr6_3:84702639-84702658 | Msa0962020:intron | 40.0% |
! | ATATTTCTGAAGAGGAGAGG+TGG | - | chr6_3:84702647-84702666 | Msa0962020:intron | 40.0% |
TCTGATCCTTGGGATTTACC+TGG | - | chr6_3:84702178-84702197 | Msa0962020:CDS | 45.0% | |
ACACTGACACATTCGAACAC+CGG | - | chr6_3:84702272-84702291 | Msa0962020:CDS | 45.0% | |
!! | TGTGGATTGATTTGAGCGTG+TGG | - | chr6_3:84702332-84702351 | Msa0962020:CDS | 45.0% |
! | TGAGCGTGTGGTGTTCTTTT+AGG | - | chr6_3:84702344-84702363 | Msa0962020:CDS | 45.0% |
TCGGTTCCCATTTGGATACT+TGG | + | chr6_3:84702411-84702430 | None:intergenic | 45.0% | |
! | TCTGACAGAGGTACAAACTC+TGG | - | chr6_3:84702431-84702450 | Msa0962020:CDS | 45.0% |
GAGGTACAAACTCTGGTTAC+TGG | - | chr6_3:84702438-84702457 | Msa0962020:CDS | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | - | chr6_3:84702449-84702468 | Msa0962020:CDS | 45.0% | |
TCAGTTCTTGAACCATGAGG+TGG | + | chr6_3:84702554-84702573 | None:intergenic | 45.0% | |
! | CGCATATTTCTGAAGAGGAG+AGG | - | chr6_3:84702644-84702663 | Msa0962020:intron | 45.0% |
!! | AGGTGGTGCTATAAATCGAG+AGG | - | chr6_3:84702664-84702683 | Msa0962020:intron | 45.0% |
AATCGAGAGGAGACAGTGAA+AGG | - | chr6_3:84702677-84702696 | Msa0962020:intron | 45.0% | |
TCTGATCCTTGGGATTTACC+TGG | - | chr6_3:84702178-84702197 | Msa0962020:CDS | 45.0% | |
ACACTGACACATTCGAACAC+CGG | - | chr6_3:84702272-84702291 | Msa0962020:CDS | 45.0% | |
!! | TGTGGATTGATTTGAGCGTG+TGG | - | chr6_3:84702332-84702351 | Msa0962020:CDS | 45.0% |
! | TGAGCGTGTGGTGTTCTTTT+AGG | - | chr6_3:84702344-84702363 | Msa0962020:CDS | 45.0% |
TCGGTTCCCATTTGGATACT+TGG | + | chr6_3:84702411-84702430 | None:intergenic | 45.0% | |
! | TCTGACAGAGGTACAAACTC+TGG | - | chr6_3:84702431-84702450 | Msa0962020:CDS | 45.0% |
GAGGTACAAACTCTGGTTAC+TGG | - | chr6_3:84702438-84702457 | Msa0962020:CDS | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | - | chr6_3:84702449-84702468 | Msa0962020:CDS | 45.0% | |
TCAGTTCTTGAACCATGAGG+TGG | + | chr6_3:84702554-84702573 | None:intergenic | 45.0% | |
! | CGCATATTTCTGAAGAGGAG+AGG | - | chr6_3:84702644-84702663 | Msa0962020:intron | 45.0% |
!! | AGGTGGTGCTATAAATCGAG+AGG | - | chr6_3:84702664-84702683 | Msa0962020:intron | 45.0% |
AATCGAGAGGAGACAGTGAA+AGG | - | chr6_3:84702677-84702696 | Msa0962020:intron | 45.0% | |
GGTGAAGTTAGATTGCCACC+AGG | - | chr6_3:84702046-84702065 | Msa0962020:CDS | 50.0% | |
GTTGGATGGAAACGGAAACC+TGG | + | chr6_3:84702067-84702086 | None:intergenic | 50.0% | |
GAAGCAGACACGACACAACA+TGG | - | chr6_3:84702249-84702268 | Msa0962020:CDS | 50.0% | |
! | CTGTCAGATCGGTTCCCATT+TGG | + | chr6_3:84702419-84702438 | None:intergenic | 50.0% |
AATGGGAACCGATCTGACAG+AGG | - | chr6_3:84702419-84702438 | Msa0962020:CDS | 50.0% | |
TACAGAGGCAAACCACCTCA+TGG | - | chr6_3:84702539-84702558 | Msa0962020:intron | 50.0% | |
ATTCAAGGGGTTGGAGTGAG+AGG | + | chr6_3:84702606-84702625 | None:intergenic | 50.0% | |
AAAGGAGTGAAGCCAAGCAG+TGG | - | chr6_3:84702695-84702714 | Msa0962020:intron | 50.0% | |
GGTGAAGTTAGATTGCCACC+AGG | - | chr6_3:84702046-84702065 | Msa0962020:CDS | 50.0% | |
GTTGGATGGAAACGGAAACC+TGG | + | chr6_3:84702067-84702086 | None:intergenic | 50.0% | |
GAAGCAGACACGACACAACA+TGG | - | chr6_3:84702249-84702268 | Msa0962020:CDS | 50.0% | |
! | CTGTCAGATCGGTTCCCATT+TGG | + | chr6_3:84702419-84702438 | None:intergenic | 50.0% |
AATGGGAACCGATCTGACAG+AGG | - | chr6_3:84702419-84702438 | Msa0962020:CDS | 50.0% | |
TACAGAGGCAAACCACCTCA+TGG | - | chr6_3:84702539-84702558 | Msa0962020:intron | 50.0% | |
ATTCAAGGGGTTGGAGTGAG+AGG | + | chr6_3:84702606-84702625 | None:intergenic | 50.0% | |
AAAGGAGTGAAGCCAAGCAG+TGG | - | chr6_3:84702695-84702714 | Msa0962020:intron | 50.0% | |
GGATGGAAACGGAAACCTGG+TGG | + | chr6_3:84702064-84702083 | None:intergenic | 55.0% | |
GGTTGGAGTGAGAGGAAGTG+AGG | + | chr6_3:84702598-84702617 | None:intergenic | 55.0% | |
CCAAAACTGCTGCCACTGCT+TGG | + | chr6_3:84702710-84702729 | None:intergenic | 55.0% | |
! | CCAAGCAGTGGCAGCAGTTT+TGG | - | chr6_3:84702707-84702726 | Msa0962020:intron | 55.0% |
!! | CAGTGGCAGCAGTTTTGGTG+AGG | - | chr6_3:84702712-84702731 | Msa0962020:intron | 55.0% |
GGATGGAAACGGAAACCTGG+TGG | + | chr6_3:84702064-84702083 | None:intergenic | 55.0% | |
GGTTGGAGTGAGAGGAAGTG+AGG | + | chr6_3:84702598-84702617 | None:intergenic | 55.0% | |
CCAAAACTGCTGCCACTGCT+TGG | + | chr6_3:84702710-84702729 | None:intergenic | 55.0% | |
! | CCAAGCAGTGGCAGCAGTTT+TGG | - | chr6_3:84702707-84702726 | Msa0962020:intron | 55.0% |
!! | CAGTGGCAGCAGTTTTGGTG+AGG | - | chr6_3:84702712-84702731 | Msa0962020:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 84702019 | 84702901 | 84702019 | ID=Msa0962020;Name=Msa0962020 |
chr6_3 | mRNA | 84702019 | 84702901 | 84702019 | ID=Msa0962020-mRNA-1;Parent=Msa0962020;Name=Msa0962020-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|2|0|238 |
chr6_3 | exon | 84702721 | 84702901 | 84702721 | ID=Msa0962020-mRNA-1:exon:15214;Parent=Msa0962020-mRNA-1 |
chr6_3 | exon | 84702019 | 84702554 | 84702019 | ID=Msa0962020-mRNA-1:exon:15213;Parent=Msa0962020-mRNA-1 |
chr6_3 | CDS | 84702721 | 84702901 | 84702721 | ID=Msa0962020-mRNA-1:cds;Parent=Msa0962020-mRNA-1 |
chr6_3 | CDS | 84702019 | 84702554 | 84702019 | ID=Msa0962020-mRNA-1:cds;Parent=Msa0962020-mRNA-1 |
Gene Sequence |
Protein sequence |