AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0963150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0963150 MtrunA17_Chr7g0214071 90.909 99 8 1 42 139 75 173 2.18e-61 192
Msa0963150 MtrunA17_Chr7g0243371 87.671 73 9 0 42 114 27 99 2.45e-43 141
Msa0963150 MtrunA17_Chr4g0017921 47.200 125 52 5 10 127 40 157 6.98e-29 110
Msa0963150 MtrunA17_Chr1g0147421 56.383 94 40 1 40 132 89 182 8.77e-29 110
Msa0963150 MtrunA17_Chr1g0183741 50.485 103 47 2 27 126 55 156 1.64e-28 108
Msa0963150 MtrunA17_Chr7g0261411 50.495 101 46 2 27 124 55 154 2.59e-28 108
Msa0963150 MtrunA17_Chr1g0200561 45.968 124 62 4 42 164 85 204 4.16e-28 108
Msa0963150 MtrunA17_Chr3g0139331 53.191 94 43 1 40 132 72 165 5.21e-28 108
Msa0963150 MtrunA17_Chr3g0109821 43.709 151 74 5 10 153 38 184 1.58e-27 109
Msa0963150 MtrunA17_Chr4g0018391 46.789 109 49 3 26 127 51 157 2.99e-27 106
Msa0963150 MtrunA17_Chr4g0042561 54.167 96 35 3 42 130 72 165 1.29e-26 103
Msa0963150 MtrunA17_Chr5g0405211 48.454 97 47 2 42 137 74 168 1.42e-26 104
Msa0963150 MtrunA17_Chr6g0461661 43.609 133 61 3 8 126 38 170 1.72e-26 104
Msa0963150 MtrunA17_Chr2g0309891 56.322 87 32 3 44 126 73 157 1.76e-26 104
Msa0963150 MtrunA17_Chr8g0385991 48.039 102 43 2 42 134 75 175 2.78e-26 101
Msa0963150 MtrunA17_Chr8g0372121 44.068 118 62 3 42 158 72 186 2.87e-26 103
Msa0963150 MtrunA17_Chr4g0047841 38.235 170 64 6 23 155 48 213 3.21e-26 103
Msa0963150 MtrunA17_Chr4g0056541 47.706 109 48 3 26 127 51 157 3.80e-26 103
Msa0963150 MtrunA17_Chr2g0309331 52.874 87 39 2 42 127 76 161 3.83e-26 103
Msa0963150 MtrunA17_Chr7g0252971 42.308 156 60 8 23 149 41 195 4.22e-26 103
Msa0963150 MtrunA17_Chr5g0398971 44.545 110 52 3 26 127 51 159 7.38e-26 102
Msa0963150 MtrunA17_Chr2g0316971 50.000 96 43 1 40 130 84 179 8.37e-26 102
Msa0963150 MtrunA17_Chr4g0060931 43.885 139 62 5 8 132 37 173 9.15e-26 102
Msa0963150 MtrunA17_Chr3g0113001 46.281 121 49 4 40 154 26 136 1.13e-25 101
Msa0963150 MtrunA17_Chr8g0346001 50.000 98 35 2 42 127 81 176 1.19e-25 103
Msa0963150 MtrunA17_Chr3g0144271 44.068 118 59 3 9 125 55 166 1.36e-25 102
Msa0963150 MtrunA17_Chr3g0131911 50.962 104 40 2 42 134 75 178 2.51e-25 99.0
Msa0963150 MtrunA17_Chr5g0417791 52.688 93 35 2 42 127 66 156 4.09e-25 99.0
Msa0963150 MtrunA17_Chr1g0197361 37.778 180 95 6 26 193 53 227 4.17e-25 102
Msa0963150 MtrunA17_Chr2g0312321 50.549 91 39 2 42 128 72 160 6.53e-25 99.4
Msa0963150 MtrunA17_Chr3g0091921 42.446 139 64 4 8 132 36 172 1.21e-24 98.6
Msa0963150 MtrunA17_Chr5g0433781 47.154 123 55 6 10 126 38 156 1.23e-24 101
Msa0963150 MtrunA17_Chr2g0318101 43.411 129 48 4 23 126 48 176 1.41e-24 99.4
Msa0963150 MtrunA17_Chr3g0113031 44.628 121 44 4 44 154 5 112 1.54e-24 97.8
Msa0963150 MtrunA17_Chr7g0263931 35.028 177 103 5 44 211 76 249 2.79e-24 98.2
Msa0963150 MtrunA17_Chr6g0484441 44.167 120 57 3 31 142 50 167 3.13e-24 97.8
Msa0963150 MtrunA17_Chr7g0217721 38.816 152 64 5 8 132 39 188 3.16e-24 98.2
Msa0963150 MtrunA17_Chr6g0481091 47.959 98 45 3 42 136 71 165 3.17e-24 96.3
Msa0963150 MtrunA17_Chr5g0428991 55.172 87 34 2 44 127 92 176 3.88e-24 99.8
Msa0963150 MtrunA17_Chr2g0318081 52.128 94 40 2 42 132 79 170 1.35e-23 96.7
Msa0963150 MtrunA17_Chr3g0128151 52.809 89 37 2 41 126 86 172 2.48e-23 97.4
Msa0963150 MtrunA17_Chr6g0453451 40.714 140 65 5 8 132 40 176 2.69e-23 95.5
Msa0963150 MtrunA17_Chr3g0092671 44.444 117 56 3 26 135 50 164 4.33e-23 96.7
Msa0963150 MtrunA17_Chr3g0128111 49.438 89 40 2 41 126 106 192 4.64e-23 93.2
Msa0963150 MtrunA17_Chr2g0326361 49.425 87 37 1 44 123 79 165 7.70e-23 94.0
Msa0963150 MtrunA17_Chr3g0124761 53.261 92 34 3 42 127 70 158 8.21e-23 93.6
Msa0963150 MtrunA17_Chr4g0052061 57.895 95 30 2 134 218 58 152 1.13e-22 90.1
Msa0963150 MtrunA17_Chr7g0217711 44.444 108 49 3 8 106 39 144 1.46e-22 90.1
Msa0963150 MtrunA17_Chr8g0384721 51.613 93 35 3 42 127 70 159 2.11e-22 92.4
Msa0963150 MtrunA17_Chr3g0130731 52.174 92 35 3 42 127 70 158 3.98e-22 91.7
Msa0963150 MtrunA17_Chr8g0364791 44.898 98 49 2 42 136 71 166 4.47e-22 93.2
Msa0963150 MtrunA17_Chr7g0253011 51.087 92 38 3 42 126 80 171 5.06e-22 92.8
Msa0963150 MtrunA17_Chr5g0417001 44.000 100 45 1 44 132 79 178 8.41e-22 92.0
Msa0963150 MtrunA17_Chr8g0359921 48.113 106 47 5 42 142 77 179 9.23e-22 91.3
Msa0963150 MtrunA17_Chr1g0201021 42.623 122 60 5 22 136 61 179 1.42e-21 92.4
Msa0963150 MtrunA17_Chr8g0361731 44.554 101 44 2 44 132 79 179 1.64e-21 91.3
Msa0963150 MtrunA17_Chr3g0130101 48.454 97 43 3 44 136 74 167 3.66e-21 90.1
Msa0963150 MtrunA17_Chr5g0400461 47.727 88 41 1 44 126 73 160 4.92e-21 89.4
Msa0963150 MtrunA17_Chr8g0384201 39.344 122 64 3 23 136 47 166 2.11e-20 89.0
Msa0963150 MtrunA17_Chr4g0054791 50.602 83 34 2 26 107 61 137 1.03e-19 85.5
Msa0963150 MtrunA17_Chr4g0038751 44.186 86 45 2 42 126 78 161 1.44e-19 84.7
Msa0963150 MtrunA17_Chr5g0442771 44.898 98 41 3 40 124 79 176 1.68e-19 84.7
Msa0963150 MtrunA17_Chr1g0197351 44.737 114 48 4 42 143 107 217 3.29e-19 85.5
Msa0963150 MtrunA17_Chr6g0453131 43.299 97 42 3 42 126 78 173 8.90e-19 83.6
Msa0963150 MtrunA17_Chr2g0311651 46.392 97 36 3 44 124 88 184 1.43e-18 82.4
Msa0963150 MtrunA17_Chr4g0076731 49.438 89 42 3 42 129 117 203 2.93e-18 82.4
Msa0963150 MtrunA17_Chr2g0311661 47.000 100 36 4 44 127 87 185 5.38e-18 80.5
Msa0963150 MtrunA17_Chr2g0321741 46.250 80 37 2 44 123 58 131 2.28e-17 79.3
Msa0963150 MtrunA17_Chr8g0345671 40.171 117 62 4 10 123 44 155 3.85e-17 79.0
Msa0963150 MtrunA17_Chr4g0050701 35.294 136 70 5 18 137 36 169 1.20e-16 75.1
Msa0963150 MtrunA17_Chr2g0321631 42.857 84 41 3 48 125 79 161 2.17e-14 70.1
Msa0963150 MtrunA17_Chr7g0266701 38.202 89 46 3 48 128 79 166 2.94e-14 69.7
Msa0963150 MtrunA17_Chr4g0026141 45.238 84 39 3 48 125 79 161 5.78e-14 68.9
Msa0963150 MtrunA17_Chr8g0345721 49.206 63 31 1 42 104 130 191 8.38e-14 67.8
Msa0963150 MtrunA17_Chr8g0345691 38.750 80 46 2 44 123 80 156 4.16e-13 67.4
Msa0963150 MtrunA17_Chr8g0345741 45.312 64 34 1 42 105 57 119 1.01e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0963150 AT5G13180.1 61.818 110 40 1 26 133 58 167 2.17e-42 144
Msa0963150 AT2G33480.3 67.778 90 24 2 42 128 18 105 2.15e-38 132
Msa0963150 AT2G33480.2 67.033 91 27 2 42 131 75 163 1.07e-37 132
Msa0963150 AT2G33480.1 65.591 93 27 2 42 131 75 165 2.49e-37 131
Msa0963150 AT2G24430.2 59.551 89 34 1 40 126 77 165 1.77e-30 114
Msa0963150 AT2G24430.1 59.551 89 34 1 40 126 77 165 1.77e-30 114
Msa0963150 AT1G33280.1 44.355 124 57 3 10 127 40 157 1.77e-30 114
Msa0963150 AT4G10350.1 44.882 127 55 4 10 127 41 161 1.91e-29 112
Msa0963150 AT4G10350.2 55.056 89 35 2 42 127 28 114 1.92e-29 111
Msa0963150 AT2G18060.3 49.057 106 51 3 42 146 75 178 4.81e-28 109
Msa0963150 AT2G18060.1 49.057 106 51 3 42 146 75 178 4.81e-28 109
Msa0963150 AT5G61430.2 54.082 98 38 3 40 132 14 109 5.31e-28 107
Msa0963150 AT5G07680.2 46.043 139 59 5 8 132 23 159 7.87e-28 107
Msa0963150 AT5G07680.1 46.043 139 59 5 8 132 37 173 1.01e-27 107
Msa0963150 AT5G61430.1 54.082 98 38 3 40 132 77 172 1.58e-27 107
Msa0963150 AT1G76420.1 49.074 108 52 2 40 145 83 189 2.50e-27 106
Msa0963150 AT4G35580.3 54.369 103 39 3 44 140 76 176 2.68e-27 108
Msa0963150 AT4G35580.2 54.369 103 39 3 44 140 76 176 2.83e-27 108
Msa0963150 AT5G39610.1 45.865 133 54 5 10 132 52 176 2.86e-27 105
Msa0963150 AT4G28530.1 55.172 87 38 1 42 128 89 174 2.92e-27 107
Msa0963150 AT4G35580.1 54.369 103 39 3 44 140 76 176 3.07e-27 108
Msa0963150 AT1G62700.1 45.600 125 55 5 10 127 39 157 4.03e-27 107
Msa0963150 AT1G62700.2 45.600 125 55 5 10 127 39 157 4.03e-27 107
Msa0963150 AT1G12260.2 45.614 114 53 3 26 132 51 162 4.45e-27 106
Msa0963150 AT1G69490.1 52.294 109 40 4 42 141 72 177 4.91e-27 104
Msa0963150 AT4G36160.2 52.577 97 41 3 42 135 80 174 5.81e-27 106
Msa0963150 AT4G36160.1 52.577 97 41 3 42 135 76 170 6.44e-27 106
Msa0963150 AT4G36160.3 52.577 97 41 3 42 135 76 170 6.44e-27 106
Msa0963150 AT5G62380.2 56.322 87 35 2 42 127 73 157 9.71e-27 105
Msa0963150 AT5G62380.1 56.322 87 35 2 42 127 73 157 9.71e-27 105
Msa0963150 AT1G12260.1 45.614 114 53 3 26 132 51 162 1.00e-26 105
Msa0963150 AT3G15170.1 44.361 133 60 4 8 126 40 172 1.38e-26 104
Msa0963150 AT5G66300.1 55.056 89 34 3 42 127 78 163 1.56e-26 103
Msa0963150 AT3G04070.2 37.968 187 81 7 11 162 30 216 3.35e-26 103
Msa0963150 AT3G18400.1 47.541 122 49 5 24 132 39 158 4.08e-26 103
Msa0963150 AT3G12977.2 53.191 94 38 3 42 131 28 119 7.09e-26 100
Msa0963150 AT5G18270.2 50.476 105 41 3 32 126 69 172 1.93e-25 101
Msa0963150 AT3G12977.1 53.191 94 38 3 42 131 81 172 2.42e-25 100
Msa0963150 AT5G18270.1 54.444 90 35 2 42 126 84 172 3.16e-25 101
Msa0963150 AT5G04410.1 46.429 112 52 3 42 147 74 183 4.86e-25 102
Msa0963150 AT1G56010.1 49.474 95 40 2 42 130 16 108 5.05e-25 99.0
Msa0963150 AT1G71930.2 53.571 84 36 2 44 126 77 158 7.01e-25 100
Msa0963150 AT1G71930.1 53.571 84 36 2 44 126 77 158 7.01e-25 100
Msa0963150 AT1G79580.3 52.874 87 38 2 42 127 83 167 7.65e-25 100
Msa0963150 AT1G79580.5 52.874 87 38 2 42 127 83 167 7.65e-25 100
Msa0963150 AT1G79580.4 52.874 87 38 2 42 127 83 167 7.65e-25 100
Msa0963150 AT1G79580.2 52.874 87 38 2 42 127 83 167 7.65e-25 100
Msa0963150 AT1G79580.1 52.874 87 38 2 42 127 83 167 7.65e-25 100
Msa0963150 AT1G61110.1 41.317 167 67 8 11 149 36 199 8.67e-25 99.8
Msa0963150 AT1G56010.2 48.958 96 41 2 42 131 83 176 1.10e-24 99.4
Msa0963150 AT4G27410.2 53.846 91 37 2 42 129 77 165 1.19e-24 99.0
Msa0963150 AT3G15510.1 44.186 129 47 4 23 126 50 178 1.25e-24 100
Msa0963150 AT3G10500.1 48.980 98 45 2 42 136 74 169 1.38e-24 101
Msa0963150 AT5G53950.1 51.087 92 40 1 40 126 78 169 1.52e-24 99.8
Msa0963150 AT2G46770.1 41.129 124 49 3 26 127 60 181 1.56e-24 99.8
Msa0963150 AT1G65910.1 54.651 86 34 3 44 126 73 156 1.67e-24 101
Msa0963150 AT1G33060.2 55.814 86 33 2 44 126 91 174 1.69e-24 101
Msa0963150 AT1G33060.1 55.814 86 33 2 44 126 91 174 1.76e-24 101
Msa0963150 AT4G27410.3 53.846 91 37 2 42 129 94 182 1.94e-24 98.6
Msa0963150 AT1G77450.1 52.688 93 35 3 41 127 72 161 2.92e-24 97.1
Msa0963150 AT1G54330.1 45.000 120 59 3 10 126 38 153 3.10e-24 97.8
Msa0963150 AT3G04070.1 35.468 203 80 7 11 162 30 232 3.49e-24 98.6
Msa0963150 AT3G61910.1 41.463 123 48 4 26 126 55 175 3.59e-24 98.2
Msa0963150 AT3G04060.1 55.556 90 34 3 42 126 83 171 3.60e-24 98.2
Msa0963150 AT3G17730.1 50.000 88 39 3 42 126 71 156 5.59e-24 95.9
Msa0963150 AT5G17260.1 43.548 124 59 4 10 126 38 157 7.69e-24 99.0
Msa0963150 AT3G10480.1 45.536 112 53 3 42 147 92 201 8.62e-24 98.6
Msa0963150 AT3G10490.2 37.805 164 83 5 42 188 92 253 1.03e-23 98.2
Msa0963150 AT3G10480.3 36.364 176 93 5 42 200 125 298 1.03e-23 98.6
Msa0963150 AT3G03200.1 43.548 124 59 4 10 126 38 157 1.57e-23 98.2
Msa0963150 AT1G32770.1 46.465 99 38 3 42 127 82 178 2.41e-23 96.3
Msa0963150 AT5G46590.1 50.562 89 39 2 42 126 71 158 2.43e-23 95.1
Msa0963150 AT3G10490.1 41.985 131 65 4 22 143 69 197 2.72e-23 94.0
Msa0963150 AT3G49530.1 42.636 129 63 5 5 126 40 164 2.75e-23 97.4
Msa0963150 AT3G49530.2 43.651 126 60 5 8 126 43 164 3.71e-23 96.3
Msa0963150 AT5G63790.1 52.128 94 34 3 42 127 113 203 3.93e-23 95.1
Msa0963150 AT5G08790.1 53.261 92 32 3 44 127 72 160 4.07e-23 94.4
Msa0963150 AT5G63790.2 52.128 94 34 3 42 127 123 213 4.86e-23 95.1
Msa0963150 AT1G34190.1 47.748 111 46 5 44 146 83 189 9.57e-23 95.9
Msa0963150 AT3G10480.2 45.045 111 54 3 42 147 92 200 1.06e-22 95.5
Msa0963150 AT5G24590.2 48.544 103 39 4 44 137 80 177 1.54e-22 95.1
Msa0963150 AT3G15500.1 38.971 136 74 3 42 174 77 206 1.54e-22 93.6
Msa0963150 AT3G29035.1 44.361 133 56 5 10 132 56 180 2.35e-22 93.2
Msa0963150 AT1G01720.1 42.748 131 63 4 42 163 70 197 2.45e-22 92.4
Msa0963150 AT1G52890.1 50.000 94 42 2 42 132 77 168 4.55e-22 92.4
Msa0963150 AT2G18060.2 47.253 91 45 3 57 146 2 90 1.28e-21 90.5
Msa0963150 AT1G52880.1 39.850 133 56 4 23 131 50 182 3.46e-21 90.1
Msa0963150 AT5G46590.2 50.000 76 37 1 42 117 71 145 3.68e-21 89.4
Msa0963150 AT3G10490.4 37.013 154 78 5 52 188 2 153 5.11e-21 89.7
Msa0963150 AT3G10490.3 37.013 154 78 5 52 188 2 153 5.11e-21 89.7
Msa0963150 AT2G17040.1 48.837 86 41 2 42 126 69 152 5.25e-21 88.6
Msa0963150 AT1G34180.4 47.423 97 44 3 44 136 95 188 9.49e-21 90.1
Msa0963150 AT1G34180.3 47.423 97 44 3 44 136 83 176 9.57e-21 90.1
Msa0963150 AT1G34180.1 47.423 97 44 3 44 136 83 176 1.32e-20 90.1
Msa0963150 AT1G34180.2 47.423 97 44 3 44 136 95 188 1.32e-20 90.1
Msa0963150 AT4G17980.1 54.545 66 30 0 42 107 71 136 2.16e-20 86.7
Msa0963150 AT4G17980.2 54.545 66 30 0 42 107 71 136 4.12e-20 86.7
Msa0963150 AT5G09330.5 39.130 138 71 5 42 173 71 201 5.42e-20 88.2
Msa0963150 AT5G09330.2 39.130 138 71 5 42 173 71 201 5.42e-20 88.2
Msa0963150 AT5G09330.4 39.130 138 71 5 42 173 71 201 5.42e-20 88.2
Msa0963150 AT5G09330.3 39.130 138 71 5 42 173 71 201 5.42e-20 88.2
Msa0963150 AT5G09330.1 39.130 138 71 5 42 173 71 201 5.42e-20 88.2
Msa0963150 AT2G02450.1 50.562 89 41 3 42 129 114 200 2.30e-19 85.5
Msa0963150 AT2G02450.2 50.562 89 41 3 42 129 114 200 2.75e-19 85.5
Msa0963150 AT1G32510.1 47.253 91 39 2 42 123 71 161 3.52e-19 84.0
Msa0963150 AT3G12910.1 36.957 138 66 4 8 124 46 183 5.25e-19 84.0
Msa0963150 AT5G64060.1 40.816 98 53 2 42 136 71 166 7.91e-19 84.0
Msa0963150 AT5G39820.1 39.450 109 42 2 42 126 83 191 1.51e-18 82.8
Msa0963150 AT1G26870.1 42.268 97 44 2 42 126 79 175 2.06e-18 83.2
Msa0963150 AT2G43000.2 47.059 85 39 3 44 124 5 87 1.92e-17 77.4
Msa0963150 AT5G22290.1 46.250 80 38 2 44 123 87 161 3.06e-17 79.3
Msa0963150 AT2G43000.1 47.059 85 39 3 44 124 83 165 4.12e-17 78.2
Msa0963150 AT2G27300.1 46.250 80 37 2 44 123 80 153 9.57e-17 77.8
Msa0963150 AT1G32870.3 44.681 94 45 3 48 136 115 206 1.88e-16 77.8
Msa0963150 AT1G32870.1 44.681 94 45 3 48 136 79 170 2.41e-16 77.4
Msa0963150 AT1G32870.2 44.681 94 45 3 48 136 79 170 2.54e-16 77.4
Msa0963150 AT3G44290.2 43.750 80 39 2 44 123 80 153 8.97e-16 73.6
Msa0963150 AT3G44290.1 43.750 80 39 2 44 123 80 153 1.43e-15 74.7
Msa0963150 AT4G01540.2 37.500 104 57 3 26 123 50 151 3.23e-15 73.9
Msa0963150 AT4G01540.1 41.573 89 46 2 26 108 50 138 3.24e-15 74.3
Msa0963150 AT4G01540.3 41.573 89 46 2 26 108 50 138 3.50e-15 73.9
Msa0963150 AT4G01540.4 41.573 89 46 2 26 108 50 138 6.34e-15 73.2
Msa0963150 AT4G01520.1 40.449 89 47 2 26 108 50 138 6.73e-15 72.4
Msa0963150 AT3G44350.2 34.416 154 86 6 48 190 79 228 9.35e-15 71.2
Msa0963150 AT4G01550.1 43.038 79 42 2 53 130 81 157 1.36e-14 72.4
Msa0963150 AT3G44350.1 48.438 64 32 1 48 111 79 141 5.01e-13 65.1
Msa0963150 AT5G22380.1 32.394 142 80 4 48 174 80 220 9.50e-13 65.5
Msa0963150 AT5G22290.2 45.455 66 31 2 58 123 2 62 2.18e-12 64.7
Msa0963150 AT1G02230.1 35.833 120 62 5 22 137 47 155 8.13e-12 63.9
Msa0963150 AT3G04420.1 38.824 85 48 2 42 126 70 150 9.13e-12 63.9
Msa0963150 AT3G04420.2 38.824 85 48 2 42 126 70 150 9.97e-12 63.2
Msa0963150 AT5G04395.1 47.541 61 31 1 47 106 109 169 1.34e-11 61.6

Find 51 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCTGATCTTGATTTAG+AGG 0.189952 6_3:-87538763 Msa0963150:CDS
TCAAGATCAGCAGGGGATAT+AGG 0.280964 6_3:+87547553 None:intergenic
CTTGACCCTCTTGATTATAT+AGG 0.297565 6_3:+87538657 None:intergenic
CTGTTAGATCGGTTCCCATT+TGG 0.335676 6_3:+87544504 None:intergenic
CTCCACCTTCTTCGGCTCTT+CGG 0.339270 6_3:+87547597 None:intergenic
TCAACTTCCTCCACCTTCTT+CGG 0.340624 6_3:+87547589 None:intergenic
GAGCTACAAACTCTGGTTAC+TGG 0.345872 6_3:-87544482 Msa0963150:CDS
CAAGATCAGCAGGGGATATA+GGG 0.348556 6_3:+87547554 None:intergenic
TCGGTTCCCATTTGGATACT+TGG 0.352516 6_3:+87544512 None:intergenic
TTACTGGAAGGCAACTGGTT+TGG 0.413426 6_3:-87544466 Msa0963150:CDS
AAAGAATCCAAGTATCCAAA+TGG 0.424681 6_3:-87544519 Msa0963150:intron
TCAAAGACTCGTGAAGTTGT+TGG 0.433785 6_3:-87544426 Msa0963150:CDS
TCTGGTTACTGGAAGGCAAC+TGG 0.438388 6_3:-87544471 Msa0963150:CDS
TCTTCTAAATCAAGATCAGC+AGG 0.465286 6_3:+87547544 None:intergenic
TTCCTCTCACTCCAACCCCT+TGG 0.484311 6_3:-87544319 Msa0963150:intron
TGTAGAATGAAAATTGGGTT+CGG 0.485724 6_3:-87544213 Msa0963150:intron
ATTATATAGGTTTCTTTGCA+AGG 0.488256 6_3:+87538670 None:intergenic
AGAAGAACTTCTAAAAGTGA+AGG 0.512360 6_3:-87547527 Msa0963150:CDS
GGTTGGAGTGAGAGGAAGTG+AGG 0.514880 6_3:+87544325 None:intergenic
AGAGGAACTTCTAAAAGTGA+AGG 0.528038 6_3:-87538745 Msa0963150:CDS
AGTTTGTAGCTCTGTTAGAT+CGG 0.532621 6_3:+87544493 None:intergenic
CGAAGAGCCGAAGAAGGTGG+AGG 0.542791 6_3:-87547596 Msa0963150:CDS
AAGAATCCAAGTATCCAAAT+GGG 0.544681 6_3:-87544518 Msa0963150:CDS
GACCAAGGGGTTGGAGTGAG+AGG 0.548262 6_3:+87544317 None:intergenic
CTCATGGTTCAAGAACTGAT+TGG 0.548704 6_3:-87544365 Msa0963150:CDS
AGAAAGACTGACCAAGGGGT+TGG 0.548887 6_3:+87544308 None:intergenic
AAGGACAATTTGTATCATCA+AGG 0.551816 6_3:-87538869 Msa0963150:CDS
TCTAACAGAGCTACAAACTC+TGG 0.560803 6_3:-87544489 Msa0963150:CDS
AAGCATCAACATACTCAAGA+AGG 0.561268 6_3:-87538820 Msa0963150:CDS
CTCTAAATCAAGATCAGCAA+GGG 0.577150 6_3:+87538764 None:intergenic
TTTGACCGAAGAGCCGAAGA+AGG 0.590908 6_3:-87547602 Msa0963150:CDS
ATACAAATTGTCCTTCATGA+AGG 0.597889 6_3:+87538877 None:intergenic
AAGGTGGAGGAAGTTGACAA+AGG 0.605500 6_3:-87547583 Msa0963150:CDS
AGAGCTAGATGCTGACATTG+AGG 0.606577 6_3:-87538712 Msa0963150:CDS
TACAGAGGGAAACCACCTCA+TGG 0.609880 6_3:-87544381 Msa0963150:CDS
CGCATATTTCTGAAGAGGAG+AGG 0.611502 6_3:-87544187 Msa0963150:CDS
CAACATACTCAAGAAGGTGG+AGG 0.614880 6_3:-87538814 Msa0963150:CDS
TCAGTTCTTGAACCATGAGG+TGG 0.615010 6_3:+87544369 None:intergenic
GGTGTCGCATATTTCTGAAG+AGG 0.616757 6_3:-87544192 Msa0963150:CDS
CATCAACATACTCAAGAAGG+TGG 0.619975 6_3:-87538817 Msa0963150:CDS
GAAGGTGGAGGAAGTTGACA+AGG 0.620804 6_3:-87538802 Msa0963150:CDS
TTCTAAATCAAGATCAGCAG+GGG 0.625754 6_3:+87547546 None:intergenic
CCTCTAAATCAAGATCAGCA+AGG 0.626143 6_3:+87538763 None:intergenic
GACCGAAGAGCCGAAGAAGG+TGG 0.629635 6_3:-87547599 Msa0963150:CDS
GCTTCATTGAAAGAGCTCCA+TGG 0.633908 6_3:-87547505 Msa0963150:intron
TACAAACTCTGGTTACTGGA+AGG 0.635081 6_3:-87544478 Msa0963150:CDS
ACTGAAGAGTACCTTCATGA+AGG 0.637591 6_3:-87538888 Msa0963150:CDS
CTTCTAAATCAAGATCAGCA+GGG 0.641826 6_3:+87547545 None:intergenic
ATATTTCTGAAGAGGAGAGG+TGG 0.674268 6_3:-87544184 Msa0963150:CDS
CAATCAGTTCTTGAACCATG+AGG 0.707588 6_3:+87544366 None:intergenic
AAGGTGGAGGAAGTTGACAA+GGG 0.751441 6_3:-87538801 Msa0963150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAATATAATATAT+AGG - chr6_3:87543038-87543057 Msa0963150:intron 0.0%
!! CAAAATAAAAAAATGTAATA+TGG - chr6_3:87539951-87539970 Msa0963150:intron 10.0%
!! TAATTTATGTTATAAAACTA+AGG + chr6_3:87542492-87542511 None:intergenic 10.0%
!! TATAAATTTAAACAATTACA+TGG - chr6_3:87543549-87543568 Msa0963150:intron 10.0%
!! AAAACTAAAAATACAAAATA+TGG - chr6_3:87543745-87543764 Msa0963150:intron 10.0%
!! TCTAAATTAAAACAATTATT+TGG - chr6_3:87545227-87545246 Msa0963150:intron 10.0%
!!! TATTTTATATTGTATAGAAT+TGG - chr6_3:87546903-87546922 Msa0963150:intron 10.0%
!!! ATTTTATATTGTATAGAATT+GGG - chr6_3:87546904-87546923 Msa0963150:intron 10.0%
!!! TTAATTTTTTTAAATCCAGA+TGG - chr6_3:87539676-87539695 Msa0963150:intron 15.0%
!! AGATGTTAAAGAATTTATTT+AGG - chr6_3:87540342-87540361 Msa0963150:intron 15.0%
!! GATGTTAAAGAATTTATTTA+GGG - chr6_3:87540343-87540362 Msa0963150:intron 15.0%
!! ATGTTAAAGAATTTATTTAG+GGG - chr6_3:87540344-87540363 Msa0963150:intron 15.0%
!! AATTCAATTGAAATTTGATA+TGG + chr6_3:87541149-87541168 None:intergenic 15.0%
!! TAATCTTAATATGAATGAAT+TGG - chr6_3:87542038-87542057 Msa0963150:intron 15.0%
!! ATTGTTATGAATATTATAAG+TGG - chr6_3:87542244-87542263 Msa0963150:intron 15.0%
!! TTTGTACTTTCATATATTAT+AGG + chr6_3:87542521-87542540 None:intergenic 15.0%
!! CAAATACACAATAAAATAAT+AGG - chr6_3:87542917-87542936 Msa0963150:intron 15.0%
!!! AGTATTAAAATTTACTTTTG+CGG - chr6_3:87543120-87543139 Msa0963150:intron 15.0%
!!! GCAAAAAAATTGAATATTTT+TGG + chr6_3:87543229-87543248 None:intergenic 15.0%
!! TGATGTTAAAAAAGTTATTA+AGG - chr6_3:87544271-87544290 Msa0963150:intron 15.0%
!! GATGTTAAAAAAGTTATTAA+GGG - chr6_3:87544272-87544291 Msa0963150:intron 15.0%
!!! CAAAGTTTATATTATCTTTT+TGG + chr6_3:87544421-87544440 None:intergenic 15.0%
!! ATGTTAAAGAATTTATTTAG+AGG - chr6_3:87540344-87540363 Msa0963150:intron 15.0%
!!! GAAACATAATATCTTTTTAT+TGG - chr6_3:87545349-87545368 Msa0963150:intron 15.0%
!!! TTTAATTTAAACCTTTTTTG+AGG + chr6_3:87545449-87545468 None:intergenic 15.0%
!! AAAAAGGTTTAAATTAAAGT+TGG - chr6_3:87545451-87545470 Msa0963150:intron 15.0%
!!! TTTTCCATATATTATTTCTA+TGG + chr6_3:87545973-87545992 None:intergenic 15.0%
!! GAAGAATAATTTGATATATA+AGG + chr6_3:87546058-87546077 None:intergenic 15.0%
!!! ATCTAAAAATGATACATTTT+TGG + chr6_3:87546581-87546600 None:intergenic 15.0%
!! TATTCATTTCTTGAAAATTA+AGG + chr6_3:87547198-87547217 None:intergenic 15.0%
!!! TTTTCAAGAAATGAATAAAT+TGG - chr6_3:87547201-87547220 Msa0963150:intron 15.0%
!! ATTATAGTTATGATTTGAAA+TGG - chr6_3:87547238-87547257 Msa0963150:intron 15.0%
!! ATTATATAGATTTCTTTGCA+AGG + chr6_3:87538988-87539007 None:intergenic 20.0%
!! CAATGTCACTAAAAATAAAA+AGG + chr6_3:87539421-87539440 None:intergenic 20.0%
!!! CTTTTTATTTTTAGTGACAT+TGG - chr6_3:87539419-87539438 Msa0963150:intron 20.0%
!!! ATAATTTTTTTCAATCCATC+TGG + chr6_3:87539694-87539713 None:intergenic 20.0%
!!! GATGGATTGAAAAAAATTAT+AGG - chr6_3:87539694-87539713 Msa0963150:intron 20.0%
!! AAAATGTTAATTGAGAGAAA+GGG + chr6_3:87539923-87539942 None:intergenic 20.0%
!! AGATTCACTCAATAAAATAA+AGG - chr6_3:87540055-87540074 Msa0963150:intron 20.0%
!!! GAAACGTAATTTCTTTTTAT+TGG - chr6_3:87540366-87540385 Msa0963150:intron 20.0%
!!! TTTTCCTTATATTATTTCTG+TGG + chr6_3:87541000-87541019 None:intergenic 20.0%
!!! GAAGAATATTTTGATACATA+TGG + chr6_3:87541087-87541106 None:intergenic 20.0%
!! ACAAATTATGGTAGAAATAA+AGG + chr6_3:87541288-87541307 None:intergenic 20.0%
!! CAAAATCATTAGACAAATTA+TGG + chr6_3:87541300-87541319 None:intergenic 20.0%
!!! GATTTTGTAGAATGAAAATT+GGG - chr6_3:87542060-87542079 Msa0963150:intron 20.0%
!! TGTTATAAAACTAAGGAAAT+GGG + chr6_3:87542485-87542504 None:intergenic 20.0%
!! ATGTTATAAAACTAAGGAAA+TGG + chr6_3:87542486-87542505 None:intergenic 20.0%
!!! ACATGATTTTTATTTTGGAT+CGG + chr6_3:87542767-87542786 None:intergenic 20.0%
!! CAAATTAAACAGCATATATT+TGG + chr6_3:87542838-87542857 None:intergenic 20.0%
!!! CAAATATATGCTGTTTAATT+TGG - chr6_3:87542836-87542855 Msa0963150:intron 20.0%
!! TGCATTAATATATTGTTTGT+TGG + chr6_3:87543072-87543091 None:intergenic 20.0%
!!! TTCAATTTTTTTGCTGTTTT+CGG - chr6_3:87543235-87543254 Msa0963150:intron 20.0%
!! GATTAATATAGATGAATTCA+AGG + chr6_3:87543333-87543352 None:intergenic 20.0%
!!! TCTTGCATTTTAAAATTTTC+CGG + chr6_3:87543674-87543693 None:intergenic 20.0%
!! TAAAACTCAAGCAAAAAAAT+TGG - chr6_3:87543770-87543789 Msa0963150:intron 20.0%
!!! ATCATTTTTCTATGTTTGTT+TGG + chr6_3:87543809-87543828 None:intergenic 20.0%
!! ACAAACATAGAAAAATGATA+AGG - chr6_3:87543810-87543829 Msa0963150:intron 20.0%
!! CCTGATGTTTATATTATATT+TGG + chr6_3:87544035-87544054 None:intergenic 20.0%
!! CCAAATATAATATAAACATC+AGG - chr6_3:87544032-87544051 Msa0963150:intron 20.0%
!!! GGACAATTTAATTTTTCTAT+TGG - chr6_3:87544293-87544312 Msa0963150:intron 20.0%
!!! AGTTTATATTATCTTTTTGG+TGG + chr6_3:87544418-87544437 None:intergenic 20.0%
!!! TTCAAGAAGAGTTTTAAATT+TGG + chr6_3:87544733-87544752 None:intergenic 20.0%
!! GAAGAATAGTTTGATATATA+AGG + chr6_3:87544926-87544945 None:intergenic 20.0%
!!! TACAATTCTAAGATTTCTTA+TGG + chr6_3:87540945-87540964 None:intergenic 20.0%
!! ACAAATTATGGTAACAATAA+AGG + chr6_3:87546259-87546278 None:intergenic 20.0%
!! CAAAAACATTTGACAAATTA+TGG + chr6_3:87546271-87546290 None:intergenic 20.0%
!!! GAGTCTTATTTTCTATTATT+TGG + chr6_3:87546490-87546509 None:intergenic 20.0%
!! TATTCATTTCTTGAAAACTA+AGG + chr6_3:87546725-87546744 None:intergenic 20.0%
!! AACTCTATCTAAAAATTTCA+AGG - chr6_3:87546999-87547018 Msa0963150:intron 20.0%
! ATTATAAAGGTTTCTTCGAA+AGG + chr6_3:87538829-87538848 None:intergenic 25.0%
! AAGTTCTTCTAAATCAAGAT+CGG + chr6_3:87538741-87538760 None:intergenic 25.0%
! AATATATAGGTTTCTTTGCA+AGG + chr6_3:87539164-87539183 None:intergenic 25.0%
! AAGAAACCTATATATTCAAG+AGG - chr6_3:87539168-87539187 Msa0963150:intron 25.0%
! AGAAACCTATATATTCAAGA+GGG - chr6_3:87539169-87539188 Msa0963150:intron 25.0%
! TAACATATAATTGCAGATTC+AGG - chr6_3:87539339-87539358 Msa0963150:intron 25.0%
!! TTGGCGTCTTTAAAAAAAAT+TGG + chr6_3:87539722-87539741 None:intergenic 25.0%
!! AAGTGCAATTTTCAAATTAG+AGG - chr6_3:87539811-87539830 Msa0963150:intron 25.0%
!! AGTGCAATTTTCAAATTAGA+GGG - chr6_3:87539812-87539831 Msa0963150:intron 25.0%
!!! GTTTTTAAAACTGACGATTT+TGG + chr6_3:87539839-87539858 None:intergenic 25.0%
!!! TCGTCAGTTTTAAAAACTTT+AGG - chr6_3:87539842-87539861 Msa0963150:intron 25.0%
!!! CGTCAGTTTTAAAAACTTTA+GGG - chr6_3:87539843-87539862 Msa0963150:intron 25.0%
! CAAAATGTTAATTGAGAGAA+AGG + chr6_3:87539924-87539943 None:intergenic 25.0%
! AATATGGAATACCAGTTTAT+AGG - chr6_3:87539967-87539986 Msa0963150:intron 25.0%
!! ATTTTATTGAGTGAATCTAG+TGG + chr6_3:87540053-87540072 None:intergenic 25.0%
! AGGTAAGTGGTTAAAAAAAT+AGG - chr6_3:87540099-87540118 Msa0963150:intron 25.0%
! GTTAAAAAAATAGGAATACG+TGG - chr6_3:87540108-87540127 Msa0963150:intron 25.0%
! AAACACACGCAAAAAAAATA+TGG + chr6_3:87540238-87540257 None:intergenic 25.0%
! TATTATATGCACCTCAAAAA+AGG - chr6_3:87540452-87540471 Msa0963150:intron 25.0%
!!! CCATTTTTAGTAAAATGTGA+AGG + chr6_3:87540490-87540509 None:intergenic 25.0%
!! CCTTCACATTTTACTAAAAA+TGG - chr6_3:87540487-87540506 Msa0963150:intron 25.0%
!! ACATTTTACTAAAAATGGAG+AGG - chr6_3:87540492-87540511 Msa0963150:intron 25.0%
!! CATTTTACTAAAAATGGAGA+GGG - chr6_3:87540493-87540512 Msa0963150:intron 25.0%
! CTTAATAAAGAGTTCAATGT+GGG + chr6_3:87540519-87540538 None:intergenic 25.0%
! TCTTAATAAAGAGTTCAATG+TGG + chr6_3:87540520-87540539 None:intergenic 25.0%
! TTTGTACATCGTTATTCTAA+AGG + chr6_3:87540622-87540641 None:intergenic 25.0%
!! ATCAGATTTAAAACACTTCT+TGG - chr6_3:87540804-87540823 Msa0963150:intron 25.0%
! AAACTTACTTGTGAAACAAT+GGG + chr6_3:87540874-87540893 None:intergenic 25.0%
! AAAACTTACTTGTGAAACAA+TGG + chr6_3:87540875-87540894 None:intergenic 25.0%
! ATGTATCAAAATATTCTTCG+TGG - chr6_3:87541088-87541107 Msa0963150:intron 25.0%
! CAATTGAAATTTGATATGGT+TGG + chr6_3:87541145-87541164 None:intergenic 25.0%
!!! ATTGACATTTTTGTTGTTTC+TGG + chr6_3:87541568-87541587 None:intergenic 25.0%
! TTACAAATTCAGACAAAGAA+AGG + chr6_3:87542001-87542020 None:intergenic 25.0%
!! GGATTTTGTAGAATGAAAAT+TGG - chr6_3:87542059-87542078 Msa0963150:intron 25.0%
! ATGAGTAATAATAATGTTCG+AGG - chr6_3:87542684-87542703 Msa0963150:intron 25.0%
! TCCAAAATAAAAATCATGTG+CGG - chr6_3:87542768-87542787 Msa0963150:intron 25.0%
!!! GTTTAATTTGGATCAGTTTT+TGG - chr6_3:87542848-87542867 Msa0963150:intron 25.0%
! AAAAATTACATGTTGCACTT+TGG + chr6_3:87542878-87542897 None:intergenic 25.0%
!!! TAAAATTTACTTTTGCGGTT+CGG - chr6_3:87543125-87543144 Msa0963150:intron 25.0%
!!! TGAATATTTTTGGATGTGTT+TGG + chr6_3:87543219-87543238 None:intergenic 25.0%
! AAAATAGATTATTGAGAGAG+AGG + chr6_3:87543431-87543450 None:intergenic 25.0%
!!! GGTTGAACTTTTTTTATGTT+CGG - chr6_3:87543489-87543508 Msa0963150:intron 25.0%
! TTAAAATGCAAGATACGATA+CGG - chr6_3:87543681-87543700 Msa0963150:intron 25.0%
!! GAAACTTTTCAAATACATCT+GGG + chr6_3:87544099-87544118 None:intergenic 25.0%
!! TGAAACTTTTCAAATACATC+TGG + chr6_3:87544100-87544119 None:intergenic 25.0%
! TTTAATATGCTCCTCAAAAA+AGG - chr6_3:87544378-87544397 Msa0963150:CDS 25.0%
! TCATTCTTATCATTGATAAG+TGG + chr6_3:87544646-87544665 None:intergenic 25.0%
!!! AATGAAAATCCATCACTTTT+AGG - chr6_3:87544698-87544717 Msa0963150:intron 25.0%
! ACAAATTATGGTAGCAATAA+TGG + chr6_3:87545128-87545147 None:intergenic 25.0%
! CAAAAACATTCGACAAATTA+TGG + chr6_3:87545140-87545159 None:intergenic 25.0%
!! ATATTGAACATTTTACTCAC+AGG - chr6_3:87540317-87540336 Msa0963150:intron 25.0%
! TATAATATGCACCTCAAAAA+AGG - chr6_3:87545435-87545454 Msa0963150:intron 25.0%
!!! CCAATTTTAGTAAAATGTGA+AGG + chr6_3:87545478-87545497 None:intergenic 25.0%
!! CCTTCACATTTTACTAAAAT+TGG - chr6_3:87545475-87545494 Msa0963150:intron 25.0%
!! ACATTTTACTAAAATTGGAG+AGG - chr6_3:87545480-87545499 Msa0963150:intron 25.0%
!! CATTTTACTAAAATTGGAGA+GGG - chr6_3:87545481-87545500 Msa0963150:intron 25.0%
! TCTTATAAAGAGTTCAATGT+GGG + chr6_3:87545507-87545526 None:intergenic 25.0%
! TTCTTATAAAGAGTTCAATG+TGG + chr6_3:87545508-87545527 None:intergenic 25.0%
! AAACTTACTTGTGAAACAAT+AGG + chr6_3:87540874-87540893 None:intergenic 25.0%
!!! CCATATATTATTTCTATGGT+AGG + chr6_3:87545969-87545988 None:intergenic 25.0%
! CCTACCATAGAAATAATATA+TGG - chr6_3:87545966-87545985 Msa0963150:intron 25.0%
! CAACTGAAATTCGATATATT+TGG + chr6_3:87546116-87546135 None:intergenic 25.0%
! AAACTACATATATGATCACA+AGG + chr6_3:87546460-87546479 None:intergenic 25.0%
!! AAACAGTTATGTTGACATTT+TGG + chr6_3:87546549-87546568 None:intergenic 25.0%
! TGTATTTATCTAGTAGTCTT+AGG + chr6_3:87547052-87547071 None:intergenic 25.0%
!! ATGATTTGAAATGGATGATT+AGG - chr6_3:87547247-87547266 Msa0963150:intron 25.0%
!! TGATTTGAAATGGATGATTA+GGG - chr6_3:87547248-87547267 Msa0963150:intron 25.0%
! AGAAGAACTTCTAAAAGTGA+AGG - chr6_3:87538751-87538770 Msa0963150:CDS 30.0%
CTTGACTCTCTTGATTATAA+AGG + chr6_3:87538842-87538861 None:intergenic 30.0%
!! TAGAAGAACTTCTAAAGTGA+AGG - chr6_3:87539090-87539109 Msa0963150:intron 30.0%
TGTATCATATATTCCACTAG+TGG - chr6_3:87539450-87539469 Msa0963150:intron 30.0%
CTTTAACTAGGTCAAAATCA+GGG - chr6_3:87539747-87539766 Msa0963150:intron 30.0%
! GTGCAATTTTCAAATTAGAG+GGG - chr6_3:87539813-87539832 Msa0963150:intron 30.0%
!! GCATTTTAACCAAAGATAAG+TGG - chr6_3:87539875-87539894 Msa0963150:intron 30.0%
ACTTTGTAACCACTTATCTT+TGG + chr6_3:87539887-87539906 None:intergenic 30.0%
AATACCAGTTTATAGGTAAG+TGG - chr6_3:87539974-87539993 Msa0963150:intron 30.0%
TGGTACAAAAACAAGGATTA+CGG - chr6_3:87539994-87540013 Msa0963150:intron 30.0%
AACATATAGTACCAGTTTCA+AGG - chr6_3:87540079-87540098 Msa0963150:intron 30.0%
AATACGTGGCAATCTATATA+AGG - chr6_3:87540122-87540141 Msa0963150:intron 30.0%
! AGAATAAGTTGGGAAAAGAT+AGG + chr6_3:87540198-87540217 None:intergenic 30.0%
TTCCCAACTTATTCTTACAA+TGG - chr6_3:87540203-87540222 Msa0963150:intron 30.0%
GACCATTGTAAGAATAAGTT+GGG + chr6_3:87540208-87540227 None:intergenic 30.0%
CAACTTATTCTTACAATGGT+CGG - chr6_3:87540207-87540226 Msa0963150:intron 30.0%
!!! TTTTTTTGCGTGTGTTTGAT+TGG - chr6_3:87540241-87540260 Msa0963150:intron 30.0%
GAATCACATTTGAGTGTTAA+TGG + chr6_3:87540417-87540436 None:intergenic 30.0%
ACTCAAATGTGATTCATAGT+CGG - chr6_3:87540422-87540441 Msa0963150:intron 30.0%
!!! CCAACTTTAAACCTTTTTTG+AGG + chr6_3:87540466-87540485 None:intergenic 30.0%
! CCTCAAAAAAGGTTTAAAGT+TGG - chr6_3:87540463-87540482 Msa0963150:intron 30.0%
!!! GGTTTTTTGAAACTATGGTT+GGG + chr6_3:87540566-87540585 None:intergenic 30.0%
!!! AGGTTTTTTGAAACTATGGT+TGG + chr6_3:87540567-87540586 None:intergenic 30.0%
TGATCTTCAAAACCTAAAAG+TGG + chr6_3:87540788-87540807 None:intergenic 30.0%
AACTTACTTGTGAAACAATG+GGG + chr6_3:87540873-87540892 None:intergenic 30.0%
!! CCTTATATTATTTCTGTGGT+AGG + chr6_3:87540996-87541015 None:intergenic 30.0%
CCTACCACAGAAATAATATA+AGG - chr6_3:87540993-87541012 Msa0963150:intron 30.0%
TTTCATGCTACCAAATAACA+GGG - chr6_3:87541506-87541525 Msa0963150:intron 30.0%
!!! GAGTTTTTTTCCCTGTTATT+TGG + chr6_3:87541519-87541538 None:intergenic 30.0%
! ATCTACAGATGATGCATTTT+CGG + chr6_3:87541610-87541629 None:intergenic 30.0%
GATTTATTGTGATCAATGCA+AGG + chr6_3:87541642-87541661 None:intergenic 30.0%
AAAGAATCCAAGTATCCAAA+TGG - chr6_3:87541759-87541778 Msa0963150:intron 30.0%
AAGAATCCAAGTATCCAAAT+GGG - chr6_3:87541760-87541779 Msa0963150:intron 30.0%
! AAAACTCATGTTTTCTACAG+AGG - chr6_3:87541882-87541901 Msa0963150:intron 30.0%
! AAACTCATGTTTTCTACAGA+GGG - chr6_3:87541883-87541902 Msa0963150:intron 30.0%
TGTAGAATGAAAATTGGGTT+CGG - chr6_3:87542065-87542084 Msa0963150:intron 30.0%
TGGATGTACATACAACAATT+GGG - chr6_3:87542264-87542283 Msa0963150:intron 30.0%
ACATACAACAATTGGGTTAT+TGG - chr6_3:87542271-87542290 Msa0963150:intron 30.0%
CATACAACAATTGGGTTATT+GGG - chr6_3:87542272-87542291 Msa0963150:intron 30.0%
TAGAGAAATACAAAGACTTG+AGG + chr6_3:87542356-87542375 None:intergenic 30.0%
TTCTCTTGTAGTGTACAATT+TGG + chr6_3:87542399-87542418 None:intergenic 30.0%
!! ACCGCACATGATTTTTATTT+TGG + chr6_3:87542772-87542791 None:intergenic 30.0%
AATAAAAATCATGTGCGGTT+CGG - chr6_3:87542773-87542792 Msa0963150:intron 30.0%
AGCATATATTTGGATCGATT+CGG + chr6_3:87542828-87542847 None:intergenic 30.0%
!!! TTTGCTGTTTTCGGTTTTTT+TGG - chr6_3:87543244-87543263 Msa0963150:intron 30.0%
!!! TGTTTTCGGTTTTTTTGGAT+CGG - chr6_3:87543249-87543268 Msa0963150:intron 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr6_3:87543272-87543291 Msa0963150:intron 30.0%
ATATAGATGAATTCAAGGAC+AGG + chr6_3:87543328-87543347 None:intergenic 30.0%
GAGAGAGGAAAAAAATGAAT+AGG + chr6_3:87543416-87543435 None:intergenic 30.0%
TCTCCAACTTAACTTTACAA+TGG - chr6_3:87543463-87543482 Msa0963150:intron 30.0%
CAACTTAACTTTACAATGGT+CGG - chr6_3:87543467-87543486 Msa0963150:intron 30.0%
AACTTAACTTTACAATGGTC+GGG - chr6_3:87543468-87543487 Msa0963150:intron 30.0%
TTTCTATGTTTGTTTGGTCT+AGG + chr6_3:87543803-87543822 None:intergenic 30.0%
!!! TCAACCATTTTGAAGTATCT+GGG - chr6_3:87544227-87544246 Msa0963150:intron 30.0%
GAATAACATTTGAGCGTTAA+TGG + chr6_3:87544344-87544363 None:intergenic 30.0%
GCTCAAATGTTATTCATAGT+CGG - chr6_3:87544349-87544368 Msa0963150:CDS 30.0%
!! CCAATTTTAAGCCTTTTTTG+AGG + chr6_3:87544392-87544411 None:intergenic 30.0%
CCTCAAAAAAGGCTTAAAAT+TGG - chr6_3:87544389-87544408 Msa0963150:CDS 30.0%
! TCGATAATTTAACTCTAAGG+AGG + chr6_3:87544481-87544500 None:intergenic 30.0%
GACTCGATAATTTAACTCTA+AGG + chr6_3:87544484-87544503 None:intergenic 30.0%
TAATATATGAAGCACGTCAA+AGG + chr6_3:87544586-87544605 None:intergenic 30.0%
TTTGACGTGCTTCATATATT+AGG - chr6_3:87544585-87544604 Msa0963150:intron 30.0%
AATGAAAATCCATCACACTT+AGG - chr6_3:87544661-87544680 Msa0963150:intron 30.0%
!!! AATCCATCACTTTTAGGTTT+TGG - chr6_3:87544704-87544723 Msa0963150:intron 30.0%
CATGTTAAAATGATCATGTG+GGG + chr6_3:87540904-87540923 None:intergenic 30.0%
CCATGTTAAAATGATCATGT+GGG + chr6_3:87544790-87544809 None:intergenic 30.0%
!! CCACATGATCATTTTAACAT+GGG - chr6_3:87544788-87544807 Msa0963150:intron 30.0%
! GCTTTGATATCTTTTCCAAA+CGG + chr6_3:87544845-87544864 None:intergenic 30.0%
!!! TACCAAATGATATCGACTTT+TGG - chr6_3:87544979-87544998 Msa0963150:intron 30.0%
GAATCACATTTGAGTGTTAA+TGG + chr6_3:87540417-87540436 None:intergenic 30.0%
ACTCAAATGTGATTCATAGT+CGG - chr6_3:87540422-87540441 Msa0963150:intron 30.0%
!!! GTTTTTTGAAACTATGGTTG+GGG + chr6_3:87540565-87540584 None:intergenic 30.0%
!!! GGTTTTTTGAAACTATGGTT+GGG + chr6_3:87540566-87540585 None:intergenic 30.0%
!!! AGGTTTTTTGAAACTATGGT+TGG + chr6_3:87540567-87540586 None:intergenic 30.0%
!!! AACGAGGTTTTTTGAAACTA+TGG + chr6_3:87545559-87545578 None:intergenic 30.0%
TCAATGATTTAACTCTAACG+AGG + chr6_3:87545575-87545594 None:intergenic 30.0%
GAGTTAAATCATTGAGTCAT+CGG - chr6_3:87545580-87545599 Msa0963150:intron 30.0%
TTTGAAGGACGTTATTCTAA+AGG + chr6_3:87545610-87545629 None:intergenic 30.0%
TGATCTTCAAAACCTAAAAG+TGG + chr6_3:87540788-87540807 None:intergenic 30.0%
!!! ATCAGTTTTAAAACGCTTCT+TGG - chr6_3:87545782-87545801 Msa0963150:intron 30.0%
ACTTGTGAAACAATAGGATT+TGG + chr6_3:87545842-87545861 None:intergenic 30.0%
! CAGTTTCATTTCTCTAAAGA+CGG + chr6_3:87546346-87546365 None:intergenic 30.0%
AGAAATGAAACTGCATGAAA+AGG - chr6_3:87546353-87546372 Msa0963150:intron 30.0%
! AACATTTTCACAAAGTAAGC+AGG - chr6_3:87546698-87546717 Msa0963150:intron 30.0%
GCAACACAAATTTAGCTATA+TGG + chr6_3:87546755-87546774 None:intergenic 30.0%
! TACATTGATCTAAAGCAAAC+TGG - chr6_3:87546951-87546970 Msa0963150:intron 30.0%
AGACTCAAAATTTCATCATC+CGG - chr6_3:87547075-87547094 Msa0963150:intron 30.0%
!!! TGCTTATTTTGATCTATGCA+AGG + chr6_3:87547172-87547191 None:intergenic 30.0%
TTGCATAGATCAAAATAAGC+AGG - chr6_3:87547171-87547190 Msa0963150:intron 30.0%
! GATTGATTCTATGATATTGC+AGG - chr6_3:87547292-87547311 Msa0963150:intron 30.0%
ATGATATTGCAGGAATTGAT+CGG - chr6_3:87547302-87547321 Msa0963150:intron 30.0%
ATACAAATTGTCCTTCATGA+AGG + chr6_3:87547404-87547423 None:intergenic 30.0%
AAGGACAATTTGTATCATCA+AGG - chr6_3:87547409-87547428 Msa0963150:intron 30.0%
!! TTGATGCTTTGATTTTGAGA+AGG + chr6_3:87547447-87547466 None:intergenic 30.0%
TTCTAAATCAAGATCAGCAG+GGG + chr6_3:87538735-87538754 None:intergenic 35.0%
CTTCTAAATCAAGATCAGCA+GGG + chr6_3:87538736-87538755 None:intergenic 35.0%
TCTTCTAAATCAAGATCAGC+AGG + chr6_3:87538737-87538756 None:intergenic 35.0%
GCATGAGAAAAATACACGTT+CGG - chr6_3:87538902-87538921 Msa0963150:intron 35.0%
CTTGACCCTCTTGAATATAT+AGG + chr6_3:87539177-87539196 None:intergenic 35.0%
GTAGATTGTATAAGCCTCAT+TGG - chr6_3:87539196-87539215 Msa0963150:intron 35.0%
! TTGTATAAGCCTCATTGGTT+CGG - chr6_3:87539201-87539220 Msa0963150:intron 35.0%
! TTTTACAATCCGAACCAATG+AGG + chr6_3:87539213-87539232 None:intergenic 35.0%
ACCGTTAGATCAATGTTCTA+CGG - chr6_3:87539513-87539532 Msa0963150:intron 35.0%
ACCGTAGAACATTGATCTAA+CGG + chr6_3:87539517-87539536 None:intergenic 35.0%
TGACCTAGTTAAAGCTGATT+TGG + chr6_3:87539741-87539760 None:intergenic 35.0%
GCTTTAACTAGGTCAAAATC+AGG - chr6_3:87539746-87539765 Msa0963150:intron 35.0%
TTGCAAATAGGTGAAACATG+AGG - chr6_3:87539782-87539801 Msa0963150:intron 35.0%
TGCAAATAGGTGAAACATGA+GGG - chr6_3:87539783-87539802 Msa0963150:intron 35.0%
TGTACCACTTACCTATAAAC+TGG + chr6_3:87539981-87540000 None:intergenic 35.0%
AGGTAAGTGGTACAAAAACA+AGG - chr6_3:87539987-87540006 Msa0963150:intron 35.0%
GGTACAAAAACAAGGATTAC+GGG - chr6_3:87539995-87540014 Msa0963150:intron 35.0%
TTAACCACTTACCTTGAAAC+TGG + chr6_3:87540093-87540112 None:intergenic 35.0%
CGACCATTGTAAGAATAAGT+TGG + chr6_3:87540209-87540228 None:intergenic 35.0%
ATTTGAGTGTTAATGGTCTG+CGG + chr6_3:87540410-87540429 None:intergenic 35.0%
!!! GACGAGGTTTTTTGAAACTA+TGG + chr6_3:87540571-87540590 None:intergenic 35.0%
TCAATGATTTAACTCTGACG+AGG + chr6_3:87540587-87540606 None:intergenic 35.0%
GAGTTAAATCATTGAGCCAT+CGG - chr6_3:87540592-87540611 Msa0963150:intron 35.0%
TTGAACTAGATCTGGATATG+AGG + chr6_3:87540645-87540664 None:intergenic 35.0%
AACGACAATTGAACTAGATC+TGG + chr6_3:87540653-87540672 None:intergenic 35.0%
TAATATATGAAGCACGACCA+AGG + chr6_3:87540699-87540718 None:intergenic 35.0%
TTGGTCGTGCTTCATATATT+AGG - chr6_3:87540698-87540717 Msa0963150:intron 35.0%
!! AGTTAAGATCCACCACTTTT+AGG - chr6_3:87540773-87540792 Msa0963150:intron 35.0%
TCTTCAAAACCTAAAAGTGG+TGG + chr6_3:87540785-87540804 None:intergenic 35.0%
TTATAACCAACGAGTGATGA+TGG - chr6_3:87541058-87541077 Msa0963150:intron 35.0%
!! TGGTACTTCGTTGATTTGAT+TGG + chr6_3:87541125-87541144 None:intergenic 35.0%
TATTGCATCATCACTACGAA+TGG + chr6_3:87541414-87541433 None:intergenic 35.0%
! TTCGTAGTGATGATGCAATA+CGG - chr6_3:87541414-87541433 Msa0963150:intron 35.0%
GTTTCATGCTACCAAATAAC+AGG - chr6_3:87541505-87541524 Msa0963150:intron 35.0%
! TGAGTGTGTGTTGTTCTATT+AGG - chr6_3:87541716-87541735 Msa0963150:intron 35.0%
! AGTTTGTAGCTCTGTTAGAT+CGG + chr6_3:87541788-87541807 None:intergenic 35.0%
AAGAAAGAAAGACTGACCAA+GGG + chr6_3:87541978-87541997 None:intergenic 35.0%
GTGGATGTACATACAACAAT+TGG - chr6_3:87542263-87542282 Msa0963150:intron 35.0%
! GGGTCATACTATTAGCTTAT+TGG - chr6_3:87542292-87542311 Msa0963150:intron 35.0%
AAAGTAGAGAGAAGTAGAGA+AGG + chr6_3:87542453-87542472 None:intergenic 35.0%
!! ATATTTGGATCGATTCGGAT+CGG + chr6_3:87542823-87542842 None:intergenic 35.0%
!!! GTTTGGTTCGGTTTTGAAAA+AGG - chr6_3:87543147-87543166 Msa0963150:intron 35.0%
AAAAACCGCTATGATCGAAT+CGG + chr6_3:87543184-87543203 None:intergenic 35.0%
!! GATGTGTTTGGATGTTGTTT+TGG + chr6_3:87543207-87543226 None:intergenic 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG - chr6_3:87543267-87543286 Msa0963150:intron 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr6_3:87543277-87543296 Msa0963150:intron 35.0%
CGACCATTGTAAAGTTAAGT+TGG + chr6_3:87543469-87543488 None:intergenic 35.0%
TGAAGTCCAGATACATGATA+CGG - chr6_3:87543616-87543635 Msa0963150:intron 35.0%
TGGTGAAAAACCAATATGTG+CGG + chr6_3:87544062-87544081 None:intergenic 35.0%
!!! ATTGGTTTTTCACCACCTAT+CGG - chr6_3:87544067-87544086 Msa0963150:intron 35.0%
!!! GTCAACCATTTTGAAGTATC+TGG - chr6_3:87544226-87544245 Msa0963150:intron 35.0%
TAAGCCCAGATACTTCAAAA+TGG + chr6_3:87544234-87544253 None:intergenic 35.0%
CAAATGTTATTCATAGTCGG+TGG - chr6_3:87544352-87544371 Msa0963150:CDS 35.0%
ATCATTGATAAGTGGCGTTA+AGG + chr6_3:87544638-87544657 None:intergenic 35.0%
! AATCCATCACACTTAGGTTT+TGG - chr6_3:87544667-87544686 Msa0963150:intron 35.0%
!! CCCACATGATCATTTTAACA+TGG - chr6_3:87544787-87544806 Msa0963150:intron 35.0%
CCCATGTTAAAATGATCATG+TGG + chr6_3:87544791-87544810 None:intergenic 35.0%
CCAAACGGAGAGAATAATTA+TGG + chr6_3:87544830-87544849 None:intergenic 35.0%
CCATAATTATTCTCTCCGTT+TGG - chr6_3:87544827-87544846 Msa0963150:intron 35.0%
!! TAATAACCAACGAGTGTTGA+TGG - chr6_3:87544897-87544916 Msa0963150:intron 35.0%
CACCAAAAGTCGATATCATT+TGG + chr6_3:87544984-87545003 None:intergenic 35.0%
GAAATTGAATATCCTGTCCT+TGG - chr6_3:87545003-87545022 Msa0963150:intron 35.0%
ACAGATAAAATCACCTTCTG+CGG + chr6_3:87541259-87541278 None:intergenic 35.0%
!! AGTTAAGATCCACCACTTTT+AGG - chr6_3:87540773-87540792 Msa0963150:intron 35.0%
TCTTCAAAACCTAAAAGTGG+TGG + chr6_3:87540785-87540804 None:intergenic 35.0%
TTATAACCAACGAGTGATGA+TGG - chr6_3:87541058-87541077 Msa0963150:intron 35.0%
!! TGGTACTTCGTTGATTTGAT+TGG + chr6_3:87541125-87541144 None:intergenic 35.0%
!! TATAAGGAGGTTGATTTGGA+TGG + chr6_3:87546205-87546224 None:intergenic 35.0%
! AGCATATAAGGAGGTTGATT+TGG + chr6_3:87546209-87546228 None:intergenic 35.0%
!!! GTTGACATTTTGGTTGTTTC+TGG + chr6_3:87546539-87546558 None:intergenic 35.0%
GATTTATTGTGATCGATGCA+TGG + chr6_3:87546613-87546632 None:intergenic 35.0%
AGCTAAATTTGTGTTGCACT+AGG - chr6_3:87546758-87546777 Msa0963150:intron 35.0%
GCTAAATTTGTGTTGCACTA+GGG - chr6_3:87546759-87546778 Msa0963150:intron 35.0%
CAACTTATTGTCCTTAGCAT+TGG + chr6_3:87547339-87547358 None:intergenic 35.0%
! GGACAATAAGTTGTTATTGC+TGG - chr6_3:87547346-87547365 Msa0963150:intron 35.0%
AAGCATCAACATACTCAAGA+AGG - chr6_3:87547458-87547477 Msa0963150:intron 35.0%
CTCTAAATCAAGATCAGCAA+GGG + chr6_3:87547517-87547536 None:intergenic 35.0%
! AGAGGAACTTCTAAAAGTGA+AGG - chr6_3:87547533-87547552 Msa0963150:CDS 35.0%
TTGCAGCATACAAGTCTAGT+TGG - chr6_3:87538866-87538885 Msa0963150:CDS 40.0%
GCATACAAGTCTAGTTGGTT+CGG - chr6_3:87538871-87538890 Msa0963150:CDS 40.0%
ACTTCATTGAAAGAGCTCCA+TGG - chr6_3:87538932-87538951 Msa0963150:intron 40.0%
TGTGACCGAATAACTGAAGA+AGG - chr6_3:87539016-87539035 Msa0963150:intron 40.0%
CTCCACCTTCTTCAGTTATT+CGG + chr6_3:87539024-87539043 None:intergenic 40.0%
GAATAACTGAAGAAGGTGGA+GGG - chr6_3:87539023-87539042 Msa0963150:intron 40.0%
TTCTAAATCAAGATCGGCAG+GGG + chr6_3:87539075-87539094 None:intergenic 40.0%
CTTCTAAATCAAGATCGGCA+GGG + chr6_3:87539076-87539095 None:intergenic 40.0%
TCTTCTAAATCAAGATCGGC+AGG + chr6_3:87539077-87539096 None:intergenic 40.0%
! ACGCCAAATCAGCTTTAACT+AGG - chr6_3:87539735-87539754 Msa0963150:intron 40.0%
AACTAGGTCAAAATCAGGGA+AGG - chr6_3:87539751-87539770 Msa0963150:intron 40.0%
!! AAGGTCGTCGTTTTGCAAAT+AGG - chr6_3:87539770-87539789 Msa0963150:intron 40.0%
GCAAATAGGTGAAACATGAG+GGG - chr6_3:87539784-87539803 Msa0963150:intron 40.0%
AGTACCAGTTTCAAGGTAAG+TGG - chr6_3:87540086-87540105 Msa0963150:intron 40.0%
GGCAATCTATATAAGGCAAG+TGG - chr6_3:87540129-87540148 Msa0963150:intron 40.0%
CAAATGTGATTCATAGTCGG+TGG - chr6_3:87540425-87540444 Msa0963150:intron 40.0%
! TTATTCTAAAGGAGCTCCGA+TGG + chr6_3:87540611-87540630 None:intergenic 40.0%
GTTGTTCGAGATCAAAACCT+TGG - chr6_3:87540679-87540698 Msa0963150:intron 40.0%
CATGACAATCAAGCAAATCC+CGG + chr6_3:87541189-87541208 None:intergenic 40.0%
ACTTCCTTATATGCTGCAGA+AGG - chr6_3:87541243-87541262 Msa0963150:intron 40.0%
ATCACCTTCTGCAGCATATA+AGG + chr6_3:87541250-87541269 None:intergenic 40.0%
TCTAACAGAGCTACAAACTC+TGG - chr6_3:87541789-87541808 Msa0963150:intron 40.0%
TACAAACTCTGGTTACTGGA+AGG - chr6_3:87541800-87541819 Msa0963150:intron 40.0%
TCAAAGACTCGTGAAGTTGT+TGG - chr6_3:87541852-87541871 Msa0963150:intron 40.0%
CAATCAGTTCTTGAACCATG+AGG + chr6_3:87541915-87541934 None:intergenic 40.0%
CTCATGGTTCAAGAACTGAT+TGG - chr6_3:87541913-87541932 Msa0963150:intron 40.0%
AGAAAGAAAGACTGACCAAG+GGG + chr6_3:87541977-87541996 None:intergenic 40.0%
GAAGAAAGAAAGACTGACCA+AGG + chr6_3:87541979-87541998 None:intergenic 40.0%
! ATATTTCTGAAGAGGAGAGG+TGG - chr6_3:87542094-87542113 Msa0963150:intron 40.0%
AATGGAGAAGAGACAGTGAA+AGG - chr6_3:87542124-87542143 Msa0963150:intron 40.0%
GTGTAATCAAGCAGTTCTGT+CGG + chr6_3:87542614-87542633 None:intergenic 40.0%
GTCTCAAAATCGATCCAAAC+CGG + chr6_3:87542734-87542753 None:intergenic 40.0%
!!! TTTACTTTTGCGGTTCGGTT+TGG - chr6_3:87543130-87543149 Msa0963150:intron 40.0%
GCTATGATCGAATCGGATTT+CGG + chr6_3:87543177-87543196 None:intergenic 40.0%
! GAAATCCGATTCGATCATAG+CGG - chr6_3:87543176-87543195 Msa0963150:intron 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG - chr6_3:87543256-87543275 Msa0963150:intron 40.0%
AGATGAATTCAAGGACAGGT+TGG + chr6_3:87543324-87543343 None:intergenic 40.0%
TCTGTACCGTATCATGTATC+TGG + chr6_3:87543625-87543644 None:intergenic 40.0%
GATACGGTACAGATACGATA+CGG - chr6_3:87543632-87543651 Msa0963150:intron 40.0%
!!! ATTTTCCGGTATCGACGTAT+CGG + chr6_3:87543660-87543679 None:intergenic 40.0%
GGTGAAAAACCAATATGTGC+GGG + chr6_3:87544061-87544080 None:intergenic 40.0%
ATATCGATGCAGGATACGTA+GGG - chr6_3:87544193-87544212 Msa0963150:CDS 40.0%
TCTCATCGTCGTTATCTCTA+TGG - chr6_3:87544547-87544566 Msa0963150:intron 40.0%
TTGATAAGTGGCGTTAAGGA+TGG + chr6_3:87544634-87544653 None:intergenic 40.0%
TCTCCAAAACCTAAGTGTGA+TGG + chr6_3:87544673-87544692 None:intergenic 40.0%
CCTCCAAAACCTAAAAGTGA+TGG + chr6_3:87544710-87544729 None:intergenic 40.0%
!!! CCATCACTTTTAGGTTTTGG+AGG - chr6_3:87544707-87544726 Msa0963150:intron 40.0%
TTGAATATCCTGTCCTTGGA+CGG - chr6_3:87545007-87545026 Msa0963150:intron 40.0%
CATAAGGAGGTTGAATTCGA+TGG + chr6_3:87545074-87545093 None:intergenic 40.0%
CAAATGTGATTCATAGTCGG+TGG - chr6_3:87540425-87540444 Msa0963150:intron 40.0%
TGTTGTTCGAGATCAAAACC+TGG - chr6_3:87540678-87540697 Msa0963150:intron 40.0%
GTTGTTCGAGATCAAAACCT+GGG - chr6_3:87540679-87540698 Msa0963150:intron 40.0%
TAATATATGAAGCACGACCC+AGG + chr6_3:87545677-87545696 None:intergenic 40.0%
TGGGTCGTGCTTCATATATT+AGG - chr6_3:87545676-87545695 Msa0963150:intron 40.0%
CATGACAATCAAGCAAATCC+CGG + chr6_3:87541189-87541208 None:intergenic 40.0%
ATCAACCTCCTTATATGCTG+CGG - chr6_3:87546210-87546229 Msa0963150:intron 40.0%
TATTGCATCATCACTGCGAA+TGG + chr6_3:87546385-87546404 None:intergenic 40.0%
!! AGGAGGCACCAAAATATTGT+GGG - chr6_3:87546790-87546809 Msa0963150:intron 40.0%
! TGTCCATGTTCAACTCGTTT+TGG + chr6_3:87546828-87546847 None:intergenic 40.0%
! ATCCATGTAACTAAGAGCAC+CGG + chr6_3:87547097-87547116 None:intergenic 40.0%
!! ACTGAAGAGTACCTTCATGA+AGG - chr6_3:87547390-87547409 Msa0963150:intron 40.0%
CATCAACATACTCAAGAAGG+TGG - chr6_3:87547461-87547480 Msa0963150:intron 40.0%
CCTCTAAATCAAGATCAGCA+AGG + chr6_3:87547518-87547537 None:intergenic 40.0%
CCTTGCTGATCTTGATTTAG+AGG - chr6_3:87547515-87547534 Msa0963150:CDS 40.0%
TCAACTTCCTCCACCTTCTT+CGG + chr6_3:87538692-87538711 None:intergenic 45.0%
AAGGTGGAGGAAGTTGACAA+AGG - chr6_3:87538695-87538714 Msa0963150:CDS 45.0%
CAAGATCAGCAGGGGATATA+GGG + chr6_3:87538727-87538746 None:intergenic 45.0%
TCAAGATCAGCAGGGGATAT+AGG + chr6_3:87538728-87538747 None:intergenic 45.0%
GCTTCATTGAAAGAGCTCCA+TGG - chr6_3:87538773-87538792 Msa0963150:CDS 45.0%
GACCGAATAACTGAAGAAGG+TGG - chr6_3:87539019-87539038 Msa0963150:intron 45.0%
CGAATAACTGAAGAAGGTGG+AGG - chr6_3:87539022-87539041 Msa0963150:intron 45.0%
AAGGTGGAGGGAATTGACAA+AGG - chr6_3:87539035-87539054 Msa0963150:intron 45.0%
AGAGCTAGACGACGATATTG+AGG - chr6_3:87539119-87539138 Msa0963150:intron 45.0%
AGTTTGATCTCAGCCACTAG+TGG + chr6_3:87539466-87539485 None:intergenic 45.0%
GGCTGAGATCAAACTATGAG+AGG - chr6_3:87539471-87539490 Msa0963150:intron 45.0%
AGCGTGAAGCAGTTATTGCA+GGG - chr6_3:87539550-87539569 Msa0963150:intron 45.0%
AAACCACGACCCCTAAACTT+CGG + chr6_3:87539585-87539604 None:intergenic 45.0%
GTGAGCAATCACGACTATGA+GGG + chr6_3:87540544-87540563 None:intergenic 45.0%
ACTTGTGAAACAATGGGGTC+TGG + chr6_3:87540868-87540887 None:intergenic 45.0%
TGGTATCCATCATCACTCGT+TGG + chr6_3:87541067-87541086 None:intergenic 45.0%
TTGAATCGCATGTCCTTGAC+CGG - chr6_3:87541167-87541186 Msa0963150:intron 45.0%
AATCAAGCAAATCCCGGTCA+AGG + chr6_3:87541183-87541202 None:intergenic 45.0%
! CGGGATTTGCTTGATTGTCA+TGG - chr6_3:87541187-87541206 Msa0963150:intron 45.0%
ATTTCGACCTCCAGATGTAG+GGG + chr6_3:87541221-87541240 None:intergenic 45.0%
GATTTCGACCTCCAGATGTA+GGG + chr6_3:87541222-87541241 None:intergenic 45.0%
TGATTTCGACCTCCAGATGT+AGG + chr6_3:87541223-87541242 None:intergenic 45.0%
TCGGTTCCCATTTGGATACT+TGG + chr6_3:87541769-87541788 None:intergenic 45.0%
! CTGTTAGATCGGTTCCCATT+TGG + chr6_3:87541777-87541796 None:intergenic 45.0%
GAGCTACAAACTCTGGTTAC+TGG - chr6_3:87541796-87541815 Msa0963150:intron 45.0%
TTACTGGAAGGCAACTGGTT+TGG - chr6_3:87541812-87541831 Msa0963150:intron 45.0%
TCAGTTCTTGAACCATGAGG+TGG + chr6_3:87541912-87541931 None:intergenic 45.0%
! GGTGTCGCATATTTCTGAAG+AGG - chr6_3:87542086-87542105 Msa0963150:intron 45.0%
! CGCATATTTCTGAAGAGGAG+AGG - chr6_3:87542091-87542110 Msa0963150:intron 45.0%
! AGGAGAGGTGGTGCTAAAAA+TGG - chr6_3:87542106-87542125 Msa0963150:intron 45.0%
CTCAGCTTCAAGTGCAAAAG+TGG - chr6_3:87542195-87542214 Msa0963150:intron 45.0%
CTTGGAGAGCAAGCACAATA+TGG + chr6_3:87542318-87542337 None:intergenic 45.0%
AGGAACAAGCACCAATGACT+TGG + chr6_3:87542336-87542355 None:intergenic 45.0%
CTTGATTACACCCTCGATCA+TGG - chr6_3:87542623-87542642 Msa0963150:intron 45.0%
AACGAGACATCCATGATCGA+GGG + chr6_3:87542636-87542655 None:intergenic 45.0%
AAACGAGACATCCATGATCG+AGG + chr6_3:87542637-87542656 None:intergenic 45.0%
!! AAATCATGTGCGGTTCGGTT+TGG - chr6_3:87542778-87542797 Msa0963150:intron 45.0%
!!! TTTTGCGGTTCGGTTTGGTT+CGG - chr6_3:87543135-87543154 Msa0963150:intron 45.0%
!! ATTCAAGGACAGGTTGGTGA+GGG + chr6_3:87543318-87543337 None:intergenic 45.0%
!! AATTCAAGGACAGGTTGGTG+AGG + chr6_3:87543319-87543338 None:intergenic 45.0%
GATATCGATGCAGGATACGT+AGG - chr6_3:87544192-87544211 Msa0963150:CDS 45.0%
TATCGATGCAGGATACGTAG+GGG - chr6_3:87544194-87544213 Msa0963150:CDS 45.0%
AGGTATCCATCAACACTCGT+TGG + chr6_3:87544906-87544925 None:intergenic 45.0%
TGAATATCCTGTCCTTGGAC+GGG - chr6_3:87545008-87545027 Msa0963150:intron 45.0%
GTGAGCAATCACGACTATGA+GGG + chr6_3:87540544-87540563 None:intergenic 45.0%
GTGAACGATAGGAGGTTTGA+AGG + chr6_3:87545625-87545644 None:intergenic 45.0%
AACGACAAGTGAACGATAGG+AGG + chr6_3:87545633-87545652 None:intergenic 45.0%
GACAACGACAAGTGAACGAT+AGG + chr6_3:87545636-87545655 None:intergenic 45.0%
AGGTATCCATCATCACTCGT+TGG + chr6_3:87546038-87546057 None:intergenic 45.0%
TTGAATCGCATGTCCTTGAC+CGG - chr6_3:87541167-87541186 Msa0963150:intron 45.0%
AATCAAGCAAATCCCGGTCA+AGG + chr6_3:87541183-87541202 None:intergenic 45.0%
! CGGGATTTGCTTGATTGTCA+TGG - chr6_3:87541187-87541206 Msa0963150:intron 45.0%
ATCACCTTCCGCAGCATATA+AGG + chr6_3:87546221-87546240 None:intergenic 45.0%
GTTGCACTAGGGAGAAAAAG+AGG - chr6_3:87546770-87546789 Msa0963150:intron 45.0%
!! GAGGAGGCACCAAAATATTG+TGG - chr6_3:87546789-87546808 Msa0963150:intron 45.0%
! CCATGTTCAACTCGTTTTGG+TGG + chr6_3:87546825-87546844 None:intergenic 45.0%
! CCACCAAAACGAGTTGAACA+TGG - chr6_3:87546822-87546841 Msa0963150:intron 45.0%
ATCCGGTGCTCTTAGTTACA+TGG - chr6_3:87547092-87547111 Msa0963150:intron 45.0%
TTGCAGGAATTGATCGGAGA+AGG - chr6_3:87547308-87547327 Msa0963150:intron 45.0%
AGAAGGCAGTTCCAATGCTA+AGG - chr6_3:87547325-87547344 Msa0963150:intron 45.0%
CAACATACTCAAGAAGGTGG+AGG - chr6_3:87547464-87547483 Msa0963150:intron 45.0%
AAGGTGGAGGAAGTTGACAA+GGG - chr6_3:87538695-87538714 Msa0963150:CDS 45.0%
AGAGCTAGATGCTGACATTG+AGG - chr6_3:87547566-87547585 Msa0963150:CDS 45.0%
!!! TTAATTTTGAATAAAATTAT+AGG + chr6_3:87542553-87542572 None:intergenic 5.0%
!! AAAAAATAAAATTTAATCTT+TGG - chr6_3:87544134-87544153 Msa0963150:intron 5.0%
TTTGACCGAAGAGCCGAAGA+AGG - chr6_3:87538676-87538695 Msa0963150:CDS 50.0%
! TTGCTGCTTCGATGTCACCA+TGG + chr6_3:87538793-87538812 None:intergenic 50.0%
AGAGCTCCATGGTGACATTG+AGG - chr6_3:87538943-87538962 Msa0963150:intron 50.0%
ATGCTGCCTCAATGTCACCA+TGG + chr6_3:87538952-87538971 None:intergenic 50.0%
CAGCGTGAAGCAGTTATTGC+AGG - chr6_3:87539549-87539568 Msa0963150:intron 50.0%
GCGTGAAGCAGTTATTGCAG+GGG - chr6_3:87539551-87539570 Msa0963150:intron 50.0%
GGATCCAGGTCCGAAGTTTA+GGG - chr6_3:87539572-87539591 Msa0963150:intron 50.0%
GATCCAGGTCCGAAGTTTAG+GGG - chr6_3:87539573-87539592 Msa0963150:intron 50.0%
!!! GGGGTCGTGGTTTTAGTCTT+CGG - chr6_3:87539592-87539611 Msa0963150:intron 50.0%
GATTACGGGCTTCCTATACG+AGG - chr6_3:87540009-87540028 Msa0963150:intron 50.0%
CTTGACCATTCGCCTCGTAT+AGG + chr6_3:87540024-87540043 None:intergenic 50.0%
GGTGAGCAATCACGACTATG+AGG + chr6_3:87540545-87540564 None:intergenic 50.0%
TGAATCGCATGTCCTTGACC+GGG - chr6_3:87541168-87541187 Msa0963150:intron 50.0%
CTGCGATGCTGCTACTAGAT+TGG - chr6_3:87541448-87541467 Msa0963150:intron 50.0%
TCTGGTTACTGGAAGGCAAC+TGG - chr6_3:87541807-87541826 Msa0963150:intron 50.0%
TACAGAGGGAAACCACCTCA+TGG - chr6_3:87541897-87541916 Msa0963150:intron 50.0%
AGAAAGACTGACCAAGGGGT+TGG + chr6_3:87541973-87541992 None:intergenic 50.0%
AAAGGAGTGAAGCCAAGCAG+TGG - chr6_3:87542142-87542161 Msa0963150:intron 50.0%
CTAAAGTTGCTGCCACTGCT+TGG + chr6_3:87542157-87542176 None:intergenic 50.0%
AGCAGTGGCAGCAACTTTAG+TGG - chr6_3:87542157-87542176 Msa0963150:intron 50.0%
GCAGTGGCAGCAACTTTAGT+GGG - chr6_3:87542158-87542177 Msa0963150:intron 50.0%
CAGTGGCAGCAACTTTAGTG+GGG - chr6_3:87542159-87542178 Msa0963150:intron 50.0%
GTGCTTGCTCTCCAAGTCAT+TGG - chr6_3:87542322-87542341 Msa0963150:intron 50.0%
ATCAGGTAGCCCGCACATAT+TGG - chr6_3:87544049-87544068 Msa0963150:intron 50.0%
! ACATCTGGGATACGACCGAT+AGG + chr6_3:87544085-87544104 None:intergenic 50.0%
TATCGGGCAGATATCGATGC+AGG - chr6_3:87544183-87544202 Msa0963150:CDS 50.0%
ATCTGGGCTTAACAGCTCAC+AGG - chr6_3:87544243-87544262 Msa0963150:intron 50.0%
CGACGATGAGACAAGATCTG+AGG + chr6_3:87544538-87544557 None:intergenic 50.0%
ATCACCTTCTGCGGCACATA+AGG + chr6_3:87545090-87545109 None:intergenic 50.0%
GGTGAGCAATCACGACTATG+AGG + chr6_3:87540545-87540564 None:intergenic 50.0%
TGAATCGCATGTCCTTGACC+GGG - chr6_3:87541168-87541187 Msa0963150:intron 50.0%
GGTGCTAGAGCTACAACATC+CGG - chr6_3:87546179-87546198 Msa0963150:intron 50.0%
!! AGGAGGTTGATTTGGATGGC+CGG + chr6_3:87546201-87546220 None:intergenic 50.0%
ACCTCCTTATATGCTGCGGA+AGG - chr6_3:87546214-87546233 Msa0963150:intron 50.0%
ACCTTCCGCAGCATATAAGG+AGG + chr6_3:87546218-87546237 None:intergenic 50.0%
GCACTAGGGAGAAAAAGAGG+AGG - chr6_3:87546773-87546792 Msa0963150:intron 50.0%
GCACCAAAATATTGTGGGCG+TGG - chr6_3:87546795-87546814 Msa0963150:intron 50.0%
! CGACCACGCCCACAATATTT+TGG + chr6_3:87546801-87546820 None:intergenic 50.0%
TGAACCACCTACTCTCGCAA+AGG - chr6_3:87546848-87546867 Msa0963150:intron 50.0%
GATGCTACCTTTGCGAGAGT+AGG + chr6_3:87546858-87546877 None:intergenic 50.0%
GAAGGTGGAGGAAGTTGACA+AGG - chr6_3:87538694-87538713 Msa0963150:CDS 50.0%
CTCCACCTTCTTCGGCTCTT+CGG + chr6_3:87538684-87538703 None:intergenic 55.0%
CAAGATCGGCAGGGGCAATA+AGG + chr6_3:87539067-87539086 None:intergenic 55.0%
GCAGTTATTGCAGGGGATCC+AGG - chr6_3:87539558-87539577 Msa0963150:intron 55.0%
GGGATCCAGGTCCGAAGTTT+AGG - chr6_3:87539571-87539590 Msa0963150:intron 55.0%
GGCTTCCTATACGAGGCGAA+TGG - chr6_3:87540016-87540035 Msa0963150:intron 55.0%
! GGCAAGTGGTCAAGAGTGTG+TGG - chr6_3:87540143-87540162 Msa0963150:intron 55.0%
GGTGATAGAGCCCCTACATC+TGG - chr6_3:87541208-87541227 Msa0963150:intron 55.0%
GATAGAGCCCCTACATCTGG+AGG - chr6_3:87541211-87541230 Msa0963150:intron 55.0%
GGTTGGAGTGAGAGGAAGTG+AGG + chr6_3:87541956-87541975 None:intergenic 55.0%
TTCCTCTCACTCCAACCCCT+TGG - chr6_3:87541959-87541978 Msa0963150:intron 55.0%
!! AGGACAGGTTGGTGAGGGTA+GGG + chr6_3:87543313-87543332 None:intergenic 55.0%
!! AAGGACAGGTTGGTGAGGGT+AGG + chr6_3:87543314-87543333 None:intergenic 55.0%
! TCTGGGATACGACCGATAGG+TGG + chr6_3:87544082-87544101 None:intergenic 55.0%
AATGAAGCACAGCCCGTCCA+AGG + chr6_3:87545023-87545042 None:intergenic 55.0%
ACCTCCTTATGTGCCGCAGA+AGG - chr6_3:87545083-87545102 Msa0963150:intron 55.0%
ACCTTCTGCGGCACATAAGG+AGG + chr6_3:87545087-87545106 None:intergenic 55.0%
GCTACCTTTGCGAGAGTAGG+TGG + chr6_3:87546855-87546874 None:intergenic 55.0%
GACCGAAGAGCCGAAGAAGG+TGG - chr6_3:87538679-87538698 Msa0963150:CDS 60.0%
CGAAGAGCCGAAGAAGGTGG+AGG - chr6_3:87538682-87538701 Msa0963150:CDS 60.0%
CGACCCCTAAACTTCGGACC+TGG + chr6_3:87539579-87539598 None:intergenic 60.0%
GGTCCGAAGTTTAGGGGTCG+TGG - chr6_3:87539579-87539598 Msa0963150:intron 60.0%
GACCAAGGGGTTGGAGTGAG+AGG + chr6_3:87541964-87541983 None:intergenic 60.0%
AATGTTCGAGGCCCACACCC+AGG - chr6_3:87542696-87542715 Msa0963150:intron 60.0%
ATGTTCGAGGCCCACACCCA+GGG - chr6_3:87542697-87542716 Msa0963150:intron 60.0%
!! GGACAGGTTGGTGAGGGTAG+GGG + chr6_3:87543312-87543331 None:intergenic 60.0%
!! CGGCACCGATACGTCGATAC+CGG - chr6_3:87543652-87543671 Msa0963150:intron 60.0%
TGTTCGAGGCCCACACCCAG+GGG - chr6_3:87542698-87542717 Msa0963150:intron 65.0%
AGCACAGCCCGTCCAAGGAC+AGG + chr6_3:87545018-87545037 None:intergenic 65.0%
CCGCGAACACCCCTGGGTGT+GGG + chr6_3:87542710-87542729 None:intergenic 70.0%
!! CCCACACCCAGGGGTGTTCG+CGG - chr6_3:87542707-87542726 Msa0963150:intron 70.0%
ACCGCGAACACCCCTGGGTG+TGG + chr6_3:87542711-87542730 None:intergenic 70.0%
!! ACCCAGGGGTGTTCGCGGTC+CGG - chr6_3:87542712-87542731 Msa0963150:intron 70.0%
ACCGGACCGCGAACACCCCT+GGG + chr6_3:87542716-87542735 None:intergenic 70.0%
AACCGGACCGCGAACACCCC+TGG + chr6_3:87542717-87542736 None:intergenic 70.0%
! GGGGTGTTCGCGGTCCGGTT+TGG - chr6_3:87542717-87542736 Msa0963150:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 87538671 87547629 87538671 ID=Msa0963150;Name=Msa0963150
chr6_3 mRNA 87538671 87547629 87538671 ID=Msa0963150-mRNA-1;Parent=Msa0963150;Name=Msa0963150-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|4|0|218
chr6_3 exon 87547506 87547629 87547506 ID=Msa0963150-mRNA-1:exon:15860;Parent=Msa0963150-mRNA-1
chr6_3 exon 87544320 87544537 87544320 ID=Msa0963150-mRNA-1:exon:15859;Parent=Msa0963150-mRNA-1
chr6_3 exon 87544162 87544230 87544162 ID=Msa0963150-mRNA-1:exon:15858;Parent=Msa0963150-mRNA-1
chr6_3 exon 87538671 87538916 87538671 ID=Msa0963150-mRNA-1:exon:15857;Parent=Msa0963150-mRNA-1
chr6_3 CDS 87547506 87547629 87547506 ID=Msa0963150-mRNA-1:cds;Parent=Msa0963150-mRNA-1
chr6_3 CDS 87544320 87544537 87544320 ID=Msa0963150-mRNA-1:cds;Parent=Msa0963150-mRNA-1
chr6_3 CDS 87544162 87544230 87544162 ID=Msa0963150-mRNA-1:cds;Parent=Msa0963150-mRNA-1
chr6_3 CDS 87538671 87538916 87538671 ID=Msa0963150-mRNA-1:cds;Parent=Msa0963150-mRNA-1
Gene Sequence

>Msa0963150

ATGAGTTTGACCGAAGAGCCGAAGAAGGTGGAGGAAGTTGACAAAGGTAAAGTCCCTATATCCCCTGCTGATCTTGATTTAGAAGAACTTCTAAAAGTGAAGGCTTCATTGAAAGAGCTCCATGAATCCAAGTATCCAAATGGGAACCGATCTAACAGAGCTACAAACTCTGGTTACTGGAAGGCAACTGGTTTGGACAAACAAATCATGAATTCAAAGACTCGTGAAGTTGTTGGTATGAAGAAAACTCATGTTTTCTACAGAGGGAAACCACCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGAATGAAAATTGGGTTCGGTGTCGCATATTTCTGAAGAGGAGAGGTGGTGCTAAAAATGGAGAAGAGACATTTGTGACTGAAGAGTACCTTCATGAAGGACAATTTGTATCATCAAGGCAAAATGTTAAGCCTTCTCAAAATCAAAGCATCAACATACTCAAGAAGGTGGAGGAAGTTGACAAGGGTAAAGTCTCTATTTCCCTTGCTGATCTTGATTTAGAGGAACTTCTAAAAGTGAAGGCTTCATTGAAAGAGCTAGATGCTGACATTGAGGTCGCATCATCTTTGTTTCGCCTTGCAAAGAAACCTATATAA
Protein sequence

>Msa0963150

MSLTEEPKKVEEVDKGKVPISPADLDLEELLKVKASLKELHESKYPNGNRSNRATNSGYWKATGLDKQIMNSKTREVVGMKKTHVFYRGKPPHGSRTDWIMHEYRLTSSHSNPLNENWVRCRIFLKRRGGAKNGEETFVTEEYLHEGQFVSSRQNVKPSQNQSINILKKVEEVDKGKVSISLADLDLEELLKVKASLKELDADIEVASSLFRLAKKPI*