Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964080 | A0A2Z6MDL0 | 76.378 | 127 | 30 | 0 | 44 | 170 | 136 | 262 | 1.74e-61 | 203 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0964080 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964080 | MtrunA17_Chr8g0339041 | 77.419 | 124 | 28 | 0 | 47 | 170 | 139 | 262 | 5.38e-64 | 200 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964080 | AT1G79220.1 | 46.094 | 128 | 68 | 1 | 44 | 170 | 162 | 289 | 3.03e-32 | 119 |
Find 37 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCCTAGTGGATCAGGTTT+TGG | 0.256158 | 6_3:-90238506 | Msa0964080:CDS |
| CCTTCGTTGCTATGTGAAAA+TGG | 0.268635 | 6_3:-90237195 | Msa0964080:CDS |
| TCTTACAAAGTTTGGTTTAT+CGG | 0.270206 | 6_3:-90236941 | Msa0964080:CDS |
| AAATATGTGGTGACGTTAAT+AGG | 0.278279 | 6_3:-90237003 | Msa0964080:CDS |
| GTTGACAATGTCATAATATT+AGG | 0.285517 | 6_3:+90236886 | None:intergenic |
| GAAAATGGCTATGACATTAA+AGG | 0.301086 | 6_3:-90237180 | Msa0964080:CDS |
| TATGACATTGTCAACTGATA+TGG | 0.327135 | 6_3:-90236878 | Msa0964080:CDS |
| TTTGATACTGCACTTGTGAT+TGG | 0.335068 | 6_3:-90238527 | Msa0964080:CDS |
| GTGTTAAATCTTACAAAGTT+TGG | 0.362500 | 6_3:-90236949 | Msa0964080:CDS |
| GTGATTGGCCCTAGTGGATC+AGG | 0.372420 | 6_3:-90238512 | Msa0964080:CDS |
| GTTGCACAATATGAAGAGTT+AGG | 0.395236 | 6_3:-90237153 | Msa0964080:CDS |
| AAGAGTTAGGCGTATTGAAA+AGG | 0.444866 | 6_3:-90237140 | Msa0964080:CDS |
| TCTCCTTCGCATGGAACACC+TGG | 0.469405 | 6_3:+90238449 | None:intergenic |
| TTCCTTTGATGATGAGAAGA+TGG | 0.470731 | 6_3:-90237070 | Msa0964080:CDS |
| ATGGTATATATAAGCAGGAC+TGG | 0.475180 | 6_3:-90237051 | Msa0964080:CDS |
| ATTACTCAAGGAGGAGGTCC+AGG | 0.491187 | 6_3:-90238467 | Msa0964080:CDS |
| AGGCGTATTGAAAAGGGACT+TGG | 0.493691 | 6_3:-90237133 | Msa0964080:CDS |
| TTATCGGATGATGAGATAGT+TGG | 0.498981 | 6_3:-90236925 | Msa0964080:CDS |
| TGCAGCCGGCGATTATTACA+AGG | 0.503215 | 6_3:-90237095 | Msa0964080:CDS |
| AGAAGATGGTATATATAAGC+AGG | 0.519672 | 6_3:-90237056 | Msa0964080:CDS |
| CAACGAAGGGTTTCTTGCAA+TGG | 0.530280 | 6_3:+90237209 | None:intergenic |
| AGAGTTAGGCGTATTGAAAA+GGG | 0.532449 | 6_3:-90237139 | Msa0964080:CDS |
| TGGTATATATAAGCAGGACT+GGG | 0.532776 | 6_3:-90237050 | Msa0964080:CDS |
| GCACTTGTGATTGGCCCTAG+TGG | 0.544194 | 6_3:-90238518 | Msa0964080:CDS |
| AGTCCAAAACCTGATCCACT+AGG | 0.566504 | 6_3:+90238503 | None:intergenic |
| TGCAAAATTGTACAAATATG+TGG | 0.567808 | 6_3:-90237016 | Msa0964080:CDS |
| GAAGTCCTTGTAATAATCGC+CGG | 0.570186 | 6_3:+90237090 | None:intergenic |
| TACCATCTTCTCATCATCAA+AGG | 0.572098 | 6_3:+90237068 | None:intergenic |
| CTAATAGACTCTCCTTCGCA+TGG | 0.580381 | 6_3:+90238440 | None:intergenic |
| CAAGATGGAAAGATTACTCA+AGG | 0.582815 | 6_3:-90238479 | Msa0964080:CDS |
| GGAAAGATTACTCAAGGAGG+AGG | 0.596488 | 6_3:-90238473 | Msa0964080:CDS |
| CGTGGAAATGATTCACGCAA+AGG | 0.597282 | 6_3:-90236971 | Msa0964080:CDS |
| GGTCCAGGTGTTCCATGCGA+AGG | 0.614059 | 6_3:-90238452 | Msa0964080:CDS |
| GTCCAAAACCTGATCCACTA+GGG | 0.614268 | 6_3:+90238504 | None:intergenic |
| GTTAATAGGAATCTCTCGCG+TGG | 0.661196 | 6_3:-90236989 | Msa0964080:CDS |
| GGTATATATAAGCAGGACTG+GGG | 0.703023 | 6_3:-90237049 | Msa0964080:CDS |
| GATGGAAAGATTACTCAAGG+AGG | 0.704189 | 6_3:-90238476 | Msa0964080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGTTAACTTTTAGTTAGA+AGG | - | chr6_3:90237031-90237050 | Msa0964080:CDS | 20.0% |
| !! | TAATTAAACAAGTTAGTTAG+AGG | - | chr6_3:90237071-90237090 | Msa0964080:CDS | 20.0% |
| !! | CAATTTCATAAGATTCAATA+TGG | - | chr6_3:90237207-90237226 | Msa0964080:CDS | 20.0% |
| !! | TAGAAATTACATAAATCTGA+TGG | - | chr6_3:90237497-90237516 | Msa0964080:intron | 20.0% |
| !! | ACAATAAGTCAATAACAATT+GGG | - | chr6_3:90237746-90237765 | Msa0964080:intron | 20.0% |
| ! | AAATTCATTGTACAATGAGT+AGG | + | chr6_3:90237164-90237183 | None:intergenic | 25.0% |
| !! | TGAATTTTCAATCCAATCAA+TGG | - | chr6_3:90237177-90237196 | Msa0964080:CDS | 25.0% |
| !! | GAATTTTCAATCCAATCAAT+GGG | - | chr6_3:90237178-90237197 | Msa0964080:CDS | 25.0% |
| !! | ATTGACTTATTGTGAGATAT+AGG | + | chr6_3:90237739-90237758 | None:intergenic | 25.0% |
| ! | CACAATAAGTCAATAACAAT+TGG | - | chr6_3:90237745-90237764 | Msa0964080:intron | 25.0% |
| ! | TTGTGAAGATTATCAATTGT+AGG | - | chr6_3:90238078-90238097 | Msa0964080:intron | 25.0% |
| ! | TGCAAAATTGTACAAATATG+TGG | - | chr6_3:90238390-90238409 | Msa0964080:intron | 25.0% |
| ! | GTGTTAAATCTTACAAAGTT+TGG | - | chr6_3:90238457-90238476 | Msa0964080:CDS | 25.0% |
| !! | TCTTACAAAGTTTGGTTTAT+CGG | - | chr6_3:90238465-90238484 | Msa0964080:CDS | 25.0% |
| ! | GTTGACAATGTCATAATATT+AGG | + | chr6_3:90238523-90238542 | None:intergenic | 25.0% |
| GTCTATTAGCGAAAAAATTG+CGG | - | chr6_3:90236980-90236999 | Msa0964080:CDS | 30.0% | |
| ATCCTGCATGTTATATAAAC+TGG | - | chr6_3:90237136-90237155 | Msa0964080:CDS | 30.0% | |
| ATCCAGTTTATATAACATGC+AGG | + | chr6_3:90237141-90237160 | None:intergenic | 30.0% | |
| TCAGTTATATGGTTAACTCT+CGG | + | chr6_3:90237293-90237312 | None:intergenic | 30.0% | |
| AGACTATGTACTCAGTTATA+TGG | + | chr6_3:90237304-90237323 | None:intergenic | 30.0% | |
| TCCTATCTAGACTTACAAAA+CGG | + | chr6_3:90237333-90237352 | None:intergenic | 30.0% | |
| ACGACATTATGTAACTTTGT+GGG | - | chr6_3:90237455-90237474 | Msa0964080:intron | 30.0% | |
| AGCTTCAATAATTGCAACAA+AGG | + | chr6_3:90237840-90237859 | None:intergenic | 30.0% | |
| ATTCAACCTGATATTTGGTT+GGG | + | chr6_3:90237903-90237922 | None:intergenic | 30.0% | |
| AATTCAACCTGATATTTGGT+TGG | + | chr6_3:90237904-90237923 | None:intergenic | 30.0% | |
| !!! | TACGGAAGTTTTGAGTAAAT+GGG | - | chr6_3:90237930-90237949 | Msa0964080:intron | 30.0% |
| ! | TTTTACGCAAACAATGACAT+AGG | + | chr6_3:90238160-90238179 | None:intergenic | 30.0% |
| TATGTCATTGTTTGCGTAAA+AGG | - | chr6_3:90238159-90238178 | Msa0964080:intron | 30.0% | |
| GAAAATGGCTATGACATTAA+AGG | - | chr6_3:90238226-90238245 | Msa0964080:intron | 30.0% | |
| AGAAGATGGTATATATAAGC+AGG | - | chr6_3:90238350-90238369 | Msa0964080:intron | 30.0% | |
| ! | AAATATGTGGTGACGTTAAT+AGG | - | chr6_3:90238403-90238422 | Msa0964080:intron | 30.0% |
| TATGACATTGTCAACTGATA+TGG | - | chr6_3:90238528-90238547 | Msa0964080:CDS | 30.0% | |
| TTTGATACTGCACTTGTGAT+TGG | - | chr6_3:90236879-90236898 | Msa0964080:CDS | 35.0% | |
| CAAGATGGAAAGATTACTCA+AGG | - | chr6_3:90236927-90236946 | Msa0964080:CDS | 35.0% | |
| TGCAGGATCAATCGAATAAA+GGG | + | chr6_3:90237124-90237143 | None:intergenic | 35.0% | |
| ATGCAGGATCAATCGAATAA+AGG | + | chr6_3:90237125-90237144 | None:intergenic | 35.0% | |
| AATTGATCTCACCCATTGAT+TGG | + | chr6_3:90237192-90237211 | None:intergenic | 35.0% | |
| ! | TCCGTTTTGTAAGTCTAGAT+AGG | - | chr6_3:90237329-90237348 | Msa0964080:intron | 35.0% |
| GACGACATTATGTAACTTTG+TGG | - | chr6_3:90237454-90237473 | Msa0964080:intron | 35.0% | |
| CAATTATTGAAGCTCCTTGT+CGG | - | chr6_3:90237846-90237865 | Msa0964080:intron | 35.0% | |
| TGGCAATTCAACCTGATATT+TGG | + | chr6_3:90237908-90237927 | None:intergenic | 35.0% | |
| CATTTACTCAAAACTTCCGT+AGG | + | chr6_3:90237931-90237950 | None:intergenic | 35.0% | |
| !!! | CTACGGAAGTTTTGAGTAAA+TGG | - | chr6_3:90237929-90237948 | Msa0964080:intron | 35.0% |
| !!! | ACGGAAGTTTTGAGTAAATG+GGG | - | chr6_3:90237931-90237950 | Msa0964080:intron | 35.0% |
| !! | TTTTGAGTAAATGGGGTTTG+TGG | - | chr6_3:90237938-90237957 | Msa0964080:intron | 35.0% |
| ACTTTGATTGTTCAGTGTCT+TGG | - | chr6_3:90238037-90238056 | Msa0964080:intron | 35.0% | |
| CTTTGATTGTTCAGTGTCTT+GGG | - | chr6_3:90238038-90238057 | Msa0964080:intron | 35.0% | |
| ! | CATTTTCACATAGCAACGAA+GGG | + | chr6_3:90238213-90238232 | None:intergenic | 35.0% |
| GTTGCACAATATGAAGAGTT+AGG | - | chr6_3:90238253-90238272 | Msa0964080:intron | 35.0% | |
| AAGAGTTAGGCGTATTGAAA+AGG | - | chr6_3:90238266-90238285 | Msa0964080:intron | 35.0% | |
| AGAGTTAGGCGTATTGAAAA+GGG | - | chr6_3:90238267-90238286 | Msa0964080:intron | 35.0% | |
| !! | TTCCTTTGATGATGAGAAGA+TGG | - | chr6_3:90238336-90238355 | Msa0964080:intron | 35.0% |
| TACCATCTTCTCATCATCAA+AGG | + | chr6_3:90238341-90238360 | None:intergenic | 35.0% | |
| ATGGTATATATAAGCAGGAC+TGG | - | chr6_3:90238355-90238374 | Msa0964080:intron | 35.0% | |
| TGGTATATATAAGCAGGACT+GGG | - | chr6_3:90238356-90238375 | Msa0964080:intron | 35.0% | |
| TTATCGGATGATGAGATAGT+TGG | - | chr6_3:90238481-90238500 | Msa0964080:CDS | 35.0% | |
| !!! | GATGAGATAGTTGGTCTTTT+TGG | - | chr6_3:90238490-90238509 | Msa0964080:CDS | 35.0% |
| GATGGAAAGATTACTCAAGG+AGG | - | chr6_3:90236930-90236949 | Msa0964080:CDS | 40.0% | |
| CAGGATCAATCGAATAAAGG+GGG | + | chr6_3:90237122-90237141 | None:intergenic | 40.0% | |
| GCAGGATCAATCGAATAAAG+GGG | + | chr6_3:90237123-90237142 | None:intergenic | 40.0% | |
| GTGAAGATCTGAAAAAGCAG+TGG | + | chr6_3:90237249-90237268 | None:intergenic | 40.0% | |
| ATGGTTAACTCTCGGTTAGA+AGG | + | chr6_3:90237285-90237304 | None:intergenic | 40.0% | |
| GTAAGTCTAGATAGGAGAGT+TGG | - | chr6_3:90237337-90237356 | Msa0964080:intron | 40.0% | |
| ATAGGAGAGTTGGAGTATGA+GGG | - | chr6_3:90237347-90237366 | Msa0964080:intron | 40.0% | |
| !!! | TGGATAGTTTTGAGTCTGCT+CGG | - | chr6_3:90237374-90237393 | Msa0964080:intron | 40.0% |
| AACTTTGTGGGACAGTACAT+AGG | - | chr6_3:90237467-90237486 | Msa0964080:intron | 40.0% | |
| ACTTTGTGGGACAGTACATA+GGG | - | chr6_3:90237468-90237487 | Msa0964080:intron | 40.0% | |
| GATGCTCGAGAAATGAAACA+TGG | + | chr6_3:90237569-90237588 | None:intergenic | 40.0% | |
| AGGCTTGTAGTTCAGATCTT+TGG | + | chr6_3:90237660-90237679 | None:intergenic | 40.0% | |
| AGGATCAAACAGAACATTGC+AGG | + | chr6_3:90237680-90237699 | None:intergenic | 40.0% | |
| AAGAAGCCAACGAAGGAAAA+GGG | + | chr6_3:90237785-90237804 | None:intergenic | 40.0% | |
| CAAAATGACAGTCTCTTCGA+AGG | + | chr6_3:90237815-90237834 | None:intergenic | 40.0% | |
| TTACTCAAAACTTCCGTAGG+TGG | + | chr6_3:90237928-90237947 | None:intergenic | 40.0% | |
| !! | GCACAGTGTTGATCTTTGTA+AGG | - | chr6_3:90238004-90238023 | Msa0964080:intron | 40.0% |
| TGTTCAGTGTCTTGGGTTTA+AGG | - | chr6_3:90238045-90238064 | Msa0964080:intron | 40.0% | |
| GTCGAATTCAGGGTTAATCT+GGG | + | chr6_3:90238122-90238141 | None:intergenic | 40.0% | |
| ! | CCATTTTCACATAGCAACGA+AGG | + | chr6_3:90238214-90238233 | None:intergenic | 40.0% |
| CCTTCGTTGCTATGTGAAAA+TGG | - | chr6_3:90238211-90238230 | Msa0964080:intron | 40.0% | |
| !!! | TCAAATGCTGATTTTGCAGC+CGG | - | chr6_3:90238297-90238316 | Msa0964080:intron | 40.0% |
| GAAGTCCTTGTAATAATCGC+CGG | + | chr6_3:90238319-90238338 | None:intergenic | 40.0% | |
| GGTATATATAAGCAGGACTG+GGG | - | chr6_3:90238357-90238376 | Msa0964080:intron | 40.0% | |
| GTCCAAAACCTGATCCACTA+GGG | + | chr6_3:90236905-90236924 | None:intergenic | 45.0% | |
| AGTCCAAAACCTGATCCACT+AGG | + | chr6_3:90236906-90236925 | None:intergenic | 45.0% | |
| !!! | TCAGGTTTTGGACTGCAAGA+TGG | - | chr6_3:90236912-90236931 | Msa0964080:CDS | 45.0% |
| GGAAAGATTACTCAAGGAGG+AGG | - | chr6_3:90236933-90236952 | Msa0964080:CDS | 45.0% | |
| CTAATAGACTCTCCTTCGCA+TGG | + | chr6_3:90236969-90236988 | None:intergenic | 45.0% | |
| GATAGGAGAGTTGGAGTATG+AGG | - | chr6_3:90237346-90237365 | Msa0964080:intron | 45.0% | |
| TAGGAGAGTTGGAGTATGAG+GGG | - | chr6_3:90237348-90237367 | Msa0964080:intron | 45.0% | |
| ! | CATTTCTCGAGCATCGTTGA+CGG | - | chr6_3:90237574-90237593 | Msa0964080:intron | 45.0% |
| TGCAAGTGGTGTTTGTGAAG+AGG | + | chr6_3:90237700-90237719 | None:intergenic | 45.0% | |
| AGAAGCCAACGAAGGAAAAG+GGG | + | chr6_3:90237784-90237803 | None:intergenic | 45.0% | |
| CAAGAAGCCAACGAAGGAAA+AGG | + | chr6_3:90237786-90237805 | None:intergenic | 45.0% | |
| !!! | CTTTTCCTTCGTTGGCTTCT+TGG | - | chr6_3:90237784-90237803 | Msa0964080:intron | 45.0% |
| TCAAACCAAGAAGCCAACGA+AGG | + | chr6_3:90237792-90237811 | None:intergenic | 45.0% | |
| GGAAGTCCCAACCAAATATC+AGG | - | chr6_3:90237894-90237913 | Msa0964080:intron | 45.0% | |
| !! | TCAGGTTGAATTGCCACCTA+CGG | - | chr6_3:90237912-90237931 | Msa0964080:intron | 45.0% |
| CGTCGAATTCAGGGTTAATC+TGG | + | chr6_3:90238123-90238142 | None:intergenic | 45.0% | |
| TTAACCCTGAATTCGACGAG+AGG | - | chr6_3:90238125-90238144 | Msa0964080:intron | 45.0% | |
| CAACGAAGGGTTTCTTGCAA+TGG | + | chr6_3:90238200-90238219 | None:intergenic | 45.0% | |
| AGGCGTATTGAAAAGGGACT+TGG | - | chr6_3:90238273-90238292 | Msa0964080:intron | 45.0% | |
| GTTAATAGGAATCTCTCGCG+TGG | - | chr6_3:90238417-90238436 | Msa0964080:intron | 45.0% | |
| CGTGGAAATGATTCACGCAA+AGG | - | chr6_3:90238435-90238454 | Msa0964080:CDS | 45.0% | |
| ATTACTCAAGGAGGAGGTCC+AGG | - | chr6_3:90236939-90236958 | Msa0964080:CDS | 50.0% | |
| AGTTGGAGTATGAGGGGACA+TGG | - | chr6_3:90237354-90237373 | Msa0964080:intron | 50.0% | |
| CATGGTTGTTCTGCGTTGTG+AGG | + | chr6_3:90237551-90237570 | None:intergenic | 50.0% | |
| AGAGACTTCAGCTGTGCAAG+TGG | + | chr6_3:90237714-90237733 | None:intergenic | 50.0% | |
| ! | AAACCCCCCTTTTCCTTCGT+TGG | - | chr6_3:90237776-90237795 | Msa0964080:intron | 50.0% |
| AAGCCAACGAAGGAAAAGGG+GGG | + | chr6_3:90237782-90237801 | None:intergenic | 50.0% | |
| GAAGCCAACGAAGGAAAAGG+GGG | + | chr6_3:90237783-90237802 | None:intergenic | 50.0% | |
| CACTCCTGCCACCTATTTGA+CGG | - | chr6_3:90237873-90237892 | Msa0964080:intron | 50.0% | |
| ACTTCCGTCAAATAGGTGGC+AGG | + | chr6_3:90237880-90237899 | None:intergenic | 50.0% | |
| TGGGACTTCCGTCAAATAGG+TGG | + | chr6_3:90237884-90237903 | None:intergenic | 50.0% | |
| GGTTGGGACTTCCGTCAAAT+AGG | + | chr6_3:90237887-90237906 | None:intergenic | 50.0% | |
| !! | ATTTGACGAGAGTGTTCGCC+CGG | - | chr6_3:90237970-90237989 | Msa0964080:intron | 50.0% |
| ACTGTGCAGTGAAGTTCACC+GGG | + | chr6_3:90237991-90238010 | None:intergenic | 50.0% | |
| CACTGTGCAGTGAAGTTCAC+CGG | + | chr6_3:90237992-90238011 | None:intergenic | 50.0% | |
| CAAGCCTCTCGTCGAATTCA+GGG | + | chr6_3:90238132-90238151 | None:intergenic | 50.0% | |
| TCAAGCCTCTCGTCGAATTC+AGG | + | chr6_3:90238133-90238152 | None:intergenic | 50.0% | |
| TGCAGCCGGCGATTATTACA+AGG | - | chr6_3:90238311-90238330 | Msa0964080:intron | 50.0% | |
| !! | AAGCAGGACTGGGGTTTTGA+AGG | - | chr6_3:90238366-90238385 | Msa0964080:intron | 50.0% |
| ! | GCACTTGTGATTGGCCCTAG+TGG | - | chr6_3:90236888-90236907 | Msa0964080:CDS | 55.0% |
| ! | GTGATTGGCCCTAGTGGATC+AGG | - | chr6_3:90236894-90236913 | Msa0964080:CDS | 55.0% |
| !! | GGCCCTAGTGGATCAGGTTT+TGG | - | chr6_3:90236900-90236919 | Msa0964080:CDS | 55.0% |
| TCTCCTTCGCATGGAACACC+TGG | + | chr6_3:90236960-90236979 | None:intergenic | 55.0% | |
| TCTGCTCGGTATCAGAGCTG+CGG | - | chr6_3:90237388-90237407 | Msa0964080:intron | 55.0% | |
| GGTATCAGAGCTGCGGCATT+GGG | - | chr6_3:90237395-90237414 | Msa0964080:intron | 55.0% | |
| CGTCAAATAGGTGGCAGGAG+TGG | + | chr6_3:90237875-90237894 | None:intergenic | 55.0% | |
| GGTCCAGGTGTTCCATGCGA+AGG | - | chr6_3:90236954-90236973 | Msa0964080:CDS | 60.0% | |
| CGGTATCAGAGCTGCGGCAT+TGG | - | chr6_3:90237394-90237413 | Msa0964080:intron | 60.0% | |
| ! | AGCTGCGGCATTGGGATGTG+TGG | - | chr6_3:90237403-90237422 | Msa0964080:intron | 60.0% |
| ! | GCTGCGGCATTGGGATGTGT+GGG | - | chr6_3:90237404-90237423 | Msa0964080:intron | 60.0% |
| GGCAGGAGTGGAAACCGACA+AGG | + | chr6_3:90237863-90237882 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 90236870 | 90238558 | 90236870 | ID=Msa0964080;Name=Msa0964080 |
| chr6_3 | mRNA | 90236870 | 90238558 | 90236870 | ID=Msa0964080-mRNA-1;Parent=Msa0964080;Name=Msa0964080-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0|0|0.5|1|1|2|0|170 |
| chr6_3 | exon | 90238424 | 90238558 | 90238424 | ID=Msa0964080-mRNA-1:exon:16234;Parent=Msa0964080-mRNA-1 |
| chr6_3 | exon | 90236870 | 90237247 | 90236870 | ID=Msa0964080-mRNA-1:exon:16233;Parent=Msa0964080-mRNA-1 |
| chr6_3 | CDS | 90238424 | 90238558 | 90238424 | ID=Msa0964080-mRNA-1:cds;Parent=Msa0964080-mRNA-1 |
| chr6_3 | CDS | 90236870 | 90237247 | 90236870 | ID=Msa0964080-mRNA-1:cds;Parent=Msa0964080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
