Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973800 | XP_013450912.1 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 5.21e-128 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973800 | sp|Q9STS6|LBD27_ARATH | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 3.19e-33 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973800 | A0A072U5L7 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 2.49e-128 | 370 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0973800 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973800 | MtrunA17_Chr6g0452671 | 84.000 | 225 | 13 | 3 | 1 | 225 | 1 | 202 | 4.79e-132 | 370 |
| Msa0973800 | MtrunA17_Chr6g0452661 | 46.185 | 249 | 88 | 7 | 9 | 231 | 7 | 235 | 5.97e-61 | 192 |
| Msa0973800 | MtrunA17_Chr5g0439111 | 46.473 | 241 | 97 | 7 | 9 | 230 | 7 | 234 | 6.42e-53 | 171 |
| Msa0973800 | MtrunA17_Chr6g0452691 | 52.439 | 164 | 65 | 4 | 1 | 160 | 1 | 155 | 5.87e-49 | 159 |
| Msa0973800 | MtrunA17_Chr4g0055441 | 51.190 | 168 | 54 | 5 | 12 | 178 | 3 | 143 | 4.04e-48 | 156 |
| Msa0973800 | MtrunA17_Chr4g0059901 | 50.450 | 111 | 55 | 0 | 5 | 115 | 4 | 114 | 1.00e-34 | 125 |
| Msa0973800 | MtrunA17_Chr8g0342351 | 55.000 | 100 | 45 | 0 | 8 | 107 | 9 | 108 | 9.53e-34 | 122 |
| Msa0973800 | MtrunA17_Chr2g0330201 | 47.706 | 109 | 57 | 0 | 8 | 116 | 16 | 124 | 4.07e-30 | 114 |
| Msa0973800 | MtrunA17_Chr3g0115431 | 44.000 | 100 | 56 | 0 | 9 | 108 | 7 | 106 | 1.06e-26 | 102 |
| Msa0973800 | MtrunA17_Chr2g0311601 | 38.182 | 110 | 68 | 0 | 8 | 117 | 10 | 119 | 1.08e-26 | 101 |
| Msa0973800 | MtrunA17_Chr4g0043421 | 36.296 | 135 | 82 | 1 | 12 | 146 | 16 | 146 | 1.84e-26 | 100 |
| Msa0973800 | MtrunA17_Chr7g0227511 | 41.000 | 100 | 59 | 0 | 8 | 107 | 8 | 107 | 1.90e-26 | 100 |
| Msa0973800 | MtrunA17_Chr6g0449651 | 41.584 | 101 | 59 | 0 | 6 | 106 | 62 | 162 | 1.94e-26 | 101 |
| Msa0973800 | MtrunA17_Chr5g0402611 | 43.299 | 97 | 55 | 0 | 12 | 108 | 9 | 105 | 2.50e-26 | 103 |
| Msa0973800 | MtrunA17_Chr8g0353981 | 50.633 | 79 | 39 | 0 | 12 | 90 | 8 | 86 | 9.10e-26 | 100 |
| Msa0973800 | MtrunA17_Chr6g0449641 | 40.000 | 100 | 60 | 0 | 8 | 107 | 6 | 105 | 2.02e-25 | 97.4 |
| Msa0973800 | MtrunA17_Chr3g0106101 | 41.414 | 99 | 58 | 0 | 6 | 104 | 2 | 100 | 2.67e-25 | 98.2 |
| Msa0973800 | MtrunA17_Chr5g0444351 | 40.206 | 97 | 58 | 0 | 12 | 108 | 6 | 102 | 3.48e-25 | 96.7 |
| Msa0973800 | MtrunA17_Chr3g0117121 | 41.667 | 96 | 56 | 0 | 12 | 107 | 11 | 106 | 4.88e-25 | 97.8 |
| Msa0973800 | MtrunA17_Chr3g0114061 | 44.706 | 85 | 47 | 0 | 6 | 90 | 3 | 87 | 7.07e-25 | 96.3 |
| Msa0973800 | MtrunA17_Chr4g0058651 | 39.583 | 96 | 58 | 0 | 12 | 107 | 12 | 107 | 1.39e-24 | 96.7 |
| Msa0973800 | MtrunA17_Chr3g0097221 | 41.584 | 101 | 59 | 0 | 8 | 108 | 4 | 104 | 1.67e-24 | 98.6 |
| Msa0973800 | MtrunA17_Chr7g0225111 | 39.623 | 106 | 64 | 0 | 12 | 117 | 6 | 111 | 1.91e-24 | 94.0 |
| Msa0973800 | MtrunA17_Chr5g0437571 | 46.835 | 79 | 42 | 0 | 12 | 90 | 7 | 85 | 8.28e-24 | 94.0 |
| Msa0973800 | MtrunA17_Chr5g0438091 | 32.895 | 152 | 95 | 2 | 7 | 155 | 35 | 182 | 1.01e-23 | 94.4 |
| Msa0973800 | MtrunA17_Chr6g0449311 | 51.724 | 116 | 50 | 3 | 39 | 151 | 1 | 113 | 2.05e-23 | 92.0 |
| Msa0973800 | MtrunA17_Chr5g0437401 | 38.318 | 107 | 66 | 0 | 8 | 114 | 8 | 114 | 1.66e-22 | 90.9 |
| Msa0973800 | MtrunA17_Chr5g0432451 | 37.255 | 102 | 64 | 0 | 7 | 108 | 39 | 140 | 2.88e-22 | 91.3 |
| Msa0973800 | MtrunA17_Chr4g0030001 | 39.844 | 128 | 65 | 4 | 12 | 134 | 25 | 145 | 3.58e-22 | 90.1 |
| Msa0973800 | MtrunA17_Chr3g0129071 | 37.255 | 102 | 64 | 0 | 7 | 108 | 43 | 144 | 4.81e-22 | 90.9 |
| Msa0973800 | MtrunA17_Chr1g0200201 | 37.097 | 124 | 74 | 1 | 12 | 135 | 73 | 192 | 1.14e-21 | 89.7 |
| Msa0973800 | MtrunA17_Chr3g0113891 | 43.529 | 85 | 48 | 0 | 8 | 92 | 11 | 95 | 1.17e-21 | 88.6 |
| Msa0973800 | MtrunA17_Chr4g0040831 | 38.182 | 110 | 65 | 1 | 4 | 113 | 8 | 114 | 3.76e-21 | 87.8 |
| Msa0973800 | MtrunA17_Chr8g0374591 | 36.364 | 99 | 63 | 0 | 10 | 108 | 7 | 105 | 5.58e-21 | 85.5 |
| Msa0973800 | MtrunA17_Chr7g0260971 | 38.318 | 107 | 65 | 1 | 8 | 113 | 11 | 117 | 6.67e-20 | 84.7 |
| Msa0973800 | MtrunA17_Chr8g0374601 | 37.374 | 99 | 62 | 0 | 10 | 108 | 25 | 123 | 1.77e-18 | 82.4 |
| Msa0973800 | MtrunA17_Chr6g0460951 | 34.259 | 108 | 70 | 1 | 12 | 118 | 41 | 148 | 2.12e-18 | 80.9 |
| Msa0973800 | MtrunA17_Chr8g0351721 | 38.614 | 101 | 61 | 1 | 12 | 111 | 19 | 119 | 1.92e-17 | 78.2 |
| Msa0973800 | MtrunA17_Chr4g0046201 | 40.000 | 80 | 48 | 0 | 11 | 90 | 6 | 85 | 2.22e-16 | 76.3 |
| Msa0973800 | MtrunA17_Chr5g0435641 | 32.990 | 97 | 64 | 1 | 10 | 105 | 6 | 102 | 6.93e-16 | 73.6 |
| Msa0973800 | MtrunA17_Chr8g0374581 | 36.000 | 100 | 63 | 1 | 10 | 108 | 7 | 106 | 7.11e-16 | 74.3 |
| Msa0973800 | MtrunA17_Chr6g0460941 | 32.979 | 94 | 62 | 1 | 6 | 98 | 2 | 95 | 1.08e-15 | 70.5 |
| Msa0973800 | MtrunA17_Chr1g0184281 | 35.714 | 98 | 62 | 1 | 12 | 108 | 16 | 113 | 1.13e-15 | 73.2 |
| Msa0973800 | MtrunA17_Chr1g0184271 | 40.741 | 81 | 47 | 1 | 12 | 91 | 13 | 93 | 1.54e-15 | 73.6 |
| Msa0973800 | MtrunA17_Chr8g0351701 | 34.694 | 98 | 63 | 1 | 12 | 108 | 24 | 121 | 3.41e-15 | 72.4 |
| Msa0973800 | MtrunA17_Chr7g0261031 | 40.741 | 81 | 47 | 1 | 12 | 91 | 9 | 89 | 6.70e-15 | 71.2 |
| Msa0973800 | MtrunA17_Chr7g0245871 | 33.673 | 98 | 64 | 1 | 12 | 108 | 28 | 125 | 1.49e-14 | 70.9 |
| Msa0973800 | MtrunA17_Chr2g0326041 | 56.250 | 48 | 21 | 0 | 12 | 59 | 34 | 81 | 1.54e-14 | 67.0 |
| Msa0973800 | MtrunA17_Chr7g0245861 | 37.363 | 91 | 53 | 3 | 1 | 87 | 1 | 91 | 1.36e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0973800 | AT3G47870.1 | 55.340 | 103 | 46 | 0 | 5 | 107 | 30 | 132 | 3.24e-34 | 125 |
| Msa0973800 | AT3G13850.1 | 43.137 | 153 | 82 | 3 | 10 | 159 | 35 | 185 | 1.36e-30 | 114 |
| Msa0973800 | AT1G72980.1 | 45.238 | 126 | 65 | 2 | 6 | 128 | 8 | 132 | 5.11e-29 | 108 |
| Msa0973800 | AT1G65620.1 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 1.37e-26 | 102 |
| Msa0973800 | AT1G65620.4 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 1.37e-26 | 102 |
| Msa0973800 | AT1G65620.3 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 1.37e-26 | 102 |
| Msa0973800 | AT1G65620.5 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 1.37e-26 | 102 |
| Msa0973800 | AT1G65620.2 | 49.398 | 83 | 42 | 0 | 8 | 90 | 6 | 88 | 1.37e-26 | 102 |
| Msa0973800 | AT3G27650.1 | 44.330 | 97 | 54 | 0 | 8 | 104 | 36 | 132 | 1.61e-26 | 100 |
| Msa0973800 | AT3G26660.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 1.65e-26 | 99.8 |
| Msa0973800 | AT3G26620.1 | 43.158 | 95 | 54 | 0 | 10 | 104 | 4 | 98 | 1.94e-26 | 99.8 |
| Msa0973800 | AT5G66870.1 | 38.835 | 103 | 63 | 0 | 6 | 108 | 2 | 104 | 3.60e-25 | 101 |
| Msa0973800 | AT2G30130.1 | 41.414 | 99 | 58 | 0 | 6 | 104 | 3 | 101 | 9.18e-25 | 97.4 |
| Msa0973800 | AT1G31320.1 | 44.578 | 83 | 46 | 0 | 8 | 90 | 10 | 92 | 1.16e-24 | 96.7 |
| Msa0973800 | AT5G63090.4 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.34e-24 | 95.5 |
| Msa0973800 | AT5G63090.3 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.34e-24 | 95.5 |
| Msa0973800 | AT5G63090.2 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.34e-24 | 95.5 |
| Msa0973800 | AT5G63090.1 | 38.235 | 102 | 63 | 0 | 12 | 113 | 12 | 113 | 4.34e-24 | 95.5 |
| Msa0973800 | AT1G16530.1 | 38.393 | 112 | 68 | 1 | 6 | 116 | 9 | 120 | 1.53e-23 | 93.6 |
| Msa0973800 | AT1G07900.1 | 38.462 | 117 | 62 | 2 | 12 | 125 | 34 | 143 | 2.03e-22 | 91.3 |
| Msa0973800 | AT2G30340.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 49 | 150 | 7.02e-22 | 91.7 |
| Msa0973800 | AT2G30340.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 48 | 149 | 7.80e-22 | 91.7 |
| Msa0973800 | AT2G23660.2 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 8.10e-22 | 92.0 |
| Msa0973800 | AT2G23660.3 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 8.10e-22 | 92.0 |
| Msa0973800 | AT2G23660.1 | 38.614 | 101 | 62 | 0 | 8 | 108 | 2 | 102 | 8.10e-22 | 92.0 |
| Msa0973800 | AT2G40470.2 | 36.275 | 102 | 65 | 0 | 7 | 108 | 16 | 117 | 2.00e-21 | 89.0 |
| Msa0973800 | AT2G28500.1 | 39.048 | 105 | 57 | 1 | 12 | 116 | 56 | 153 | 4.03e-21 | 89.0 |
| Msa0973800 | AT2G40470.1 | 36.275 | 102 | 65 | 0 | 7 | 108 | 41 | 142 | 4.16e-21 | 88.6 |
| Msa0973800 | AT3G50510.1 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.95e-20 | 85.9 |
| Msa0973800 | AT3G50510.2 | 38.000 | 100 | 62 | 0 | 9 | 108 | 10 | 109 | 2.95e-20 | 85.9 |
| Msa0973800 | AT3G11090.1 | 35.135 | 111 | 71 | 1 | 8 | 117 | 8 | 118 | 6.26e-20 | 84.0 |
| Msa0973800 | AT5G15060.1 | 45.122 | 82 | 43 | 1 | 3 | 82 | 9 | 90 | 9.05e-20 | 82.8 |
| Msa0973800 | AT1G06280.1 | 39.640 | 111 | 56 | 2 | 10 | 120 | 23 | 122 | 5.25e-19 | 82.4 |
| Msa0973800 | AT3G03760.1 | 34.906 | 106 | 68 | 1 | 12 | 116 | 52 | 157 | 1.58e-17 | 79.7 |
| Msa0973800 | AT2G42430.1 | 40.659 | 91 | 53 | 1 | 2 | 91 | 6 | 96 | 1.69e-17 | 79.3 |
| Msa0973800 | AT4G00220.1 | 37.500 | 96 | 59 | 1 | 14 | 108 | 20 | 115 | 2.32e-16 | 75.9 |
| Msa0973800 | AT3G58190.1 | 34.058 | 138 | 72 | 4 | 12 | 148 | 12 | 131 | 4.81e-16 | 74.7 |
| Msa0973800 | AT5G35900.1 | 29.000 | 100 | 71 | 0 | 9 | 108 | 3 | 102 | 1.07e-15 | 73.6 |
| Msa0973800 | AT2G42440.1 | 33.094 | 139 | 74 | 4 | 12 | 149 | 8 | 128 | 1.26e-15 | 74.3 |
| Msa0973800 | AT5G06080.1 | 33.913 | 115 | 71 | 3 | 11 | 124 | 7 | 117 | 1.54e-15 | 72.4 |
| Msa0973800 | AT4G00210.1 | 34.211 | 114 | 74 | 1 | 12 | 124 | 12 | 125 | 2.24e-15 | 73.2 |
| Msa0973800 | AT2G19820.1 | 35.088 | 114 | 65 | 3 | 1 | 112 | 1 | 107 | 3.09e-15 | 70.5 |
| Msa0973800 | AT2G31310.1 | 35.632 | 87 | 55 | 1 | 6 | 91 | 2 | 88 | 6.26e-14 | 68.6 |
| Msa0973800 | AT2G45420.1 | 32.292 | 96 | 64 | 1 | 14 | 108 | 40 | 135 | 6.94e-14 | 69.7 |
| Msa0973800 | AT2G45410.1 | 33.621 | 116 | 74 | 3 | 14 | 127 | 19 | 133 | 4.13e-13 | 66.2 |
Find 42 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATTGTGAAGAATTAT+TGG | 0.154703 | 6_4:+6520195 | Msa0973800:CDS |
| GTAGTACAAAATTTGATTTA+AGG | 0.221208 | 6_4:+6520227 | Msa0973800:CDS |
| CTTTCTTCTTTGGAATTTGC+AGG | 0.258062 | 6_4:-6519627 | None:intergenic |
| GAAGAATTATTGGATCTTAA+TGG | 0.282033 | 6_4:+6520205 | Msa0973800:CDS |
| TACCTCAGTTACTCCTTTAT+CGG | 0.306913 | 6_4:-6520272 | None:intergenic |
| TAGTACAAAATTTGATTTAA+GGG | 0.316753 | 6_4:+6520228 | Msa0973800:CDS |
| GGTTTATCAGCAGGAAAATA+AGG | 0.329247 | 6_4:-6519674 | None:intergenic |
| AAGTCTGGTTTGGTATCAAT+TGG | 0.352922 | 6_4:-6520058 | None:intergenic |
| ATAAAATTAGTTTCAAAGTC+TGG | 0.359506 | 6_4:-6520073 | None:intergenic |
| AAAATATCAGATGCCGATAA+AGG | 0.366493 | 6_4:+6520259 | Msa0973800:CDS |
| GGCAACGCTCATCGTTTGTT+TGG | 0.376780 | 6_4:+6519707 | Msa0973800:CDS |
| AAAATTTGATTTAAGGGAAA+AGG | 0.388332 | 6_4:+6520234 | Msa0973800:CDS |
| CTTTAATATCTTCGATATGT+TGG | 0.391762 | 6_4:-6519735 | None:intergenic |
| ATTAGTTTCAAAGTCTGGTT+TGG | 0.401491 | 6_4:-6520068 | None:intergenic |
| GATGTTATTATGATGTATTA+TGG | 0.406805 | 6_4:+6519848 | Msa0973800:CDS |
| ACATCAAGACATCCACCAAC+AGG | 0.415425 | 6_4:-6519830 | None:intergenic |
| AGAATGATCAATTGATAAGT+AGG | 0.435407 | 6_4:-6519966 | None:intergenic |
| ATTCTTACTAGATCATTGTA+AGG | 0.440710 | 6_4:+6519910 | Msa0973800:CDS |
| GAAGATATTAAAGCAAGTTA+AGG | 0.448622 | 6_4:+6519745 | Msa0973800:CDS |
| GGGATGTCATAATAAGAATT+CGG | 0.449186 | 6_4:-6520016 | None:intergenic |
| ATTAGTGGTGTTAGCAATAG+TGG | 0.455191 | 6_4:+6520121 | Msa0973800:CDS |
| AACACTTGTGGTTTATCAGC+AGG | 0.459111 | 6_4:-6519683 | None:intergenic |
| GGAACTCGAGTGCTACTAGA+AGG | 0.478886 | 6_4:-6519995 | None:intergenic |
| AGTCTGGTTTGGTATCAATT+GGG | 0.496674 | 6_4:-6520057 | None:intergenic |
| GCTGATAAACCACAAGTGTT+CGG | 0.498732 | 6_4:+6519686 | Msa0973800:CDS |
| AGGGTTACACAATTGATTAG+TGG | 0.501559 | 6_4:+6520106 | Msa0973800:CDS |
| CGTGCTCAATTCCCTGTTGG+TGG | 0.544713 | 6_4:+6519818 | Msa0973800:CDS |
| GATCCAATAATTCTTCACAA+TGG | 0.560190 | 6_4:-6520198 | None:intergenic |
| GAATGATCAATTGATAAGTA+GGG | 0.561261 | 6_4:-6519965 | None:intergenic |
| TGAGCGTTGCCGAACACTTG+TGG | 0.583347 | 6_4:-6519695 | None:intergenic |
| ATGCGTGCTCAATTCCCTGT+TGG | 0.591693 | 6_4:+6519815 | Msa0973800:CDS |
| TCGAGTGCTACTAGAAGGAG+TGG | 0.591697 | 6_4:-6519990 | None:intergenic |
| TAGTGGTGGTGGCAATGCAA+TGG | 0.604784 | 6_4:+6520138 | Msa0973800:CDS |
| GGTGTTAGCAATAGTGGTGG+TGG | 0.623088 | 6_4:+6520127 | Msa0973800:CDS |
| GGGTTAATAGTAACATTACG+AGG | 0.645055 | 6_4:-6520037 | None:intergenic |
| CATCAAGACATCCACCAACA+GGG | 0.653135 | 6_4:-6519829 | None:intergenic |
| GGTTAATAGTAACATTACGA+GGG | 0.671173 | 6_4:-6520036 | None:intergenic |
| CAACAGAGGAGACACAAGCA+AGG | 0.679554 | 6_4:+6519595 | Msa0973800:CDS |
| TCTAACTTGATGGTAACACA+AGG | 0.694400 | 6_4:+6520169 | Msa0973800:CDS |
| TACCTAATGAATATCAACAG+AGG | 0.696712 | 6_4:+6519581 | None:intergenic |
| TGCCGATAAAGGAGTAACTG+AGG | 0.703223 | 6_4:+6520270 | Msa0973800:CDS |
| AGTGGTGTTAGCAATAGTGG+TGG | 0.717746 | 6_4:+6520124 | Msa0973800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATTATTATTATTTT+TGG | + | chr6_4:6520311-6520330 | Msa0973800:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | + | chr6_4:6520312-6520331 | Msa0973800:intron | 0.0% |
| !!! | ATTTTAATTATTATTATTTT+TGG | + | chr6_4:6520311-6520330 | Msa0973800:intron | 0.0% |
| !!! | TTTTAATTATTATTATTTTT+GGG | + | chr6_4:6520312-6520331 | Msa0973800:intron | 0.0% |
| !!! | TAGTACAAAATTTGATTTAA+GGG | + | chr6_4:6520228-6520247 | Msa0973800:CDS | 15.0% |
| !!! | TTTTGCTAACAAATTTATTA+TGG | - | chr6_4:6520652-6520671 | None:intergenic | 15.0% |
| !!! | TTAAGTTTAACCATTTTTTT+CGG | + | chr6_4:6520688-6520707 | Msa0973800:intron | 15.0% |
| !! | TTAAACGAAATTCAAAATAA+AGG | - | chr6_4:6520748-6520767 | None:intergenic | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | + | chr6_4:6520799-6520818 | Msa0973800:intron | 15.0% |
| !!! | TAGTACAAAATTTGATTTAA+GGG | + | chr6_4:6520228-6520247 | Msa0973800:CDS | 15.0% |
| !!! | TTTTGCTAACAAATTTATTA+TGG | - | chr6_4:6520652-6520671 | None:intergenic | 15.0% |
| !!! | TTAAGTTTAACCATTTTTTT+CGG | + | chr6_4:6520688-6520707 | Msa0973800:intron | 15.0% |
| !! | TTAAACGAAATTCAAAATAA+AGG | - | chr6_4:6520748-6520767 | None:intergenic | 15.0% |
| !!! | TTAACATTTTTATCCTAAAA+AGG | + | chr6_4:6520799-6520818 | Msa0973800:intron | 15.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | + | chr6_4:6519790-6519809 | Msa0973800:CDS | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | + | chr6_4:6519848-6519867 | Msa0973800:CDS | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | - | chr6_4:6520076-6520095 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | + | chr6_4:6520075-6520094 | Msa0973800:CDS | 20.0% |
| !!! | GTAGTACAAAATTTGATTTA+AGG | + | chr6_4:6520227-6520246 | Msa0973800:CDS | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | + | chr6_4:6520234-6520253 | Msa0973800:CDS | 20.0% |
| !! | TAACGATATGTAATTAATGA+AGG | - | chr6_4:6520428-6520447 | None:intergenic | 20.0% |
| !! | TACATATCGTTAATCAATAT+AGG | + | chr6_4:6520436-6520455 | Msa0973800:intron | 20.0% |
| !! | ACATCAAAACTAATCAAATT+AGG | + | chr6_4:6521124-6521143 | Msa0973800:intron | 20.0% |
| !! | CATCAAAACTAATCAAATTA+GGG | + | chr6_4:6521125-6521144 | Msa0973800:intron | 20.0% |
| !! | ATCAAAACTAATCAAATTAG+GGG | + | chr6_4:6521126-6521145 | Msa0973800:intron | 20.0% |
| !! | AATAAAAACACAATGTGTTA+AGG | - | chr6_4:6521204-6521223 | None:intergenic | 20.0% |
| !!! | GTTTTTATAAGTTCTATACA+TGG | + | chr6_4:6521276-6521295 | Msa0973800:intron | 20.0% |
| !!! | GAAATCAATTATTTTTGAGT+CGG | + | chr6_4:6519790-6519809 | Msa0973800:CDS | 20.0% |
| !! | GATGTTATTATGATGTATTA+TGG | + | chr6_4:6519848-6519867 | Msa0973800:CDS | 20.0% |
| !!! | ATAAAATTAGTTTCAAAGTC+TGG | - | chr6_4:6520076-6520095 | None:intergenic | 20.0% |
| !!! | AGACTTTGAAACTAATTTTA+TGG | + | chr6_4:6520075-6520094 | Msa0973800:CDS | 20.0% |
| !!! | GTAGTACAAAATTTGATTTA+AGG | + | chr6_4:6520227-6520246 | Msa0973800:CDS | 20.0% |
| !!! | AAAATTTGATTTAAGGGAAA+AGG | + | chr6_4:6520234-6520253 | Msa0973800:CDS | 20.0% |
| !! | TAACGATATGTAATTAATGA+AGG | - | chr6_4:6520428-6520447 | None:intergenic | 20.0% |
| !! | TACATATCGTTAATCAATAT+AGG | + | chr6_4:6520436-6520455 | Msa0973800:intron | 20.0% |
| !! | ACATCAAAACTAATCAAATT+AGG | + | chr6_4:6521124-6521143 | Msa0973800:intron | 20.0% |
| !! | CATCAAAACTAATCAAATTA+GGG | + | chr6_4:6521125-6521144 | Msa0973800:intron | 20.0% |
| !! | ATCAAAACTAATCAAATTAG+GGG | + | chr6_4:6521126-6521145 | Msa0973800:intron | 20.0% |
| !! | AATAAAAACACAATGTGTTA+AGG | - | chr6_4:6521204-6521223 | None:intergenic | 20.0% |
| !!! | GTTTTTATAAGTTCTATACA+TGG | + | chr6_4:6521276-6521295 | Msa0973800:intron | 20.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | - | chr6_4:6519738-6519757 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | + | chr6_4:6519745-6519764 | Msa0973800:CDS | 25.0% |
| ! | ATTCTTACTAGATCATTGTA+AGG | + | chr6_4:6519910-6519929 | Msa0973800:CDS | 25.0% |
| ! | GAATGATCAATTGATAAGTA+GGG | - | chr6_4:6519968-6519987 | None:intergenic | 25.0% |
| ! | AGAATGATCAATTGATAAGT+AGG | - | chr6_4:6519969-6519988 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | + | chr6_4:6520195-6520214 | Msa0973800:CDS | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | + | chr6_4:6520205-6520224 | Msa0973800:CDS | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | + | chr6_4:6520499-6520518 | Msa0973800:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | - | chr6_4:6520538-6520557 | None:intergenic | 25.0% |
| !! | TCCAAGTTATTTAAGTATTG+TGG | + | chr6_4:6520541-6520560 | Msa0973800:intron | 25.0% |
| ! | TCCACAATACTTAAATAACT+TGG | - | chr6_4:6520545-6520564 | None:intergenic | 25.0% |
| !!! | TTTAACCATTTTTTTCGGAT+TGG | + | chr6_4:6520693-6520712 | Msa0973800:intron | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | - | chr6_4:6520815-6520834 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | + | chr6_4:6520857-6520876 | Msa0973800:intron | 25.0% |
| !!! | TGATTAGTTTTGATGTAACA+AGG | - | chr6_4:6521120-6521139 | None:intergenic | 25.0% |
| ! | CTTTAATATCTTCGATATGT+TGG | - | chr6_4:6519738-6519757 | None:intergenic | 25.0% |
| ! | GAAGATATTAAAGCAAGTTA+AGG | + | chr6_4:6519745-6519764 | Msa0973800:CDS | 25.0% |
| ! | ATTCTTACTAGATCATTGTA+AGG | + | chr6_4:6519910-6519929 | Msa0973800:CDS | 25.0% |
| ! | GAATGATCAATTGATAAGTA+GGG | - | chr6_4:6519968-6519987 | None:intergenic | 25.0% |
| ! | AGAATGATCAATTGATAAGT+AGG | - | chr6_4:6519969-6519988 | None:intergenic | 25.0% |
| ! | ATTCCATTGTGAAGAATTAT+TGG | + | chr6_4:6520195-6520214 | Msa0973800:CDS | 25.0% |
| ! | GAAGAATTATTGGATCTTAA+TGG | + | chr6_4:6520205-6520224 | Msa0973800:CDS | 25.0% |
| ! | AAATTTCTCACATGATAAGA+AGG | + | chr6_4:6520499-6520518 | Msa0973800:intron | 25.0% |
| ! | TACTTAAATAACTTGGAATG+AGG | - | chr6_4:6520538-6520557 | None:intergenic | 25.0% |
| !! | TCCAAGTTATTTAAGTATTG+TGG | + | chr6_4:6520541-6520560 | Msa0973800:intron | 25.0% |
| ! | TCCACAATACTTAAATAACT+TGG | - | chr6_4:6520545-6520564 | None:intergenic | 25.0% |
| !!! | TTTAACCATTTTTTTCGGAT+TGG | + | chr6_4:6520693-6520712 | Msa0973800:intron | 25.0% |
| !! | TGATTCTTTTAGTCCTTTTT+AGG | - | chr6_4:6520815-6520834 | None:intergenic | 25.0% |
| !!! | AGATCAATCTGAAACAATTT+TGG | + | chr6_4:6520857-6520876 | Msa0973800:intron | 25.0% |
| !!! | TGATTAGTTTTGATGTAACA+AGG | - | chr6_4:6521120-6521139 | None:intergenic | 25.0% |
| ! | CTTTTGAACACTTTCTTCTT+TGG | - | chr6_4:6519640-6519659 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | - | chr6_4:6519943-6519962 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | - | chr6_4:6519944-6519963 | None:intergenic | 30.0% |
| GGGATGTCATAATAAGAATT+CGG | - | chr6_4:6520019-6520038 | None:intergenic | 30.0% | |
| GGTTAATAGTAACATTACGA+GGG | - | chr6_4:6520039-6520058 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | - | chr6_4:6520071-6520090 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | + | chr6_4:6520087-6520106 | Msa0973800:CDS | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | + | chr6_4:6520159-6520178 | Msa0973800:CDS | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | - | chr6_4:6520201-6520220 | None:intergenic | 30.0% | |
| AAAATATCAGATGCCGATAA+AGG | + | chr6_4:6520259-6520278 | Msa0973800:CDS | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | - | chr6_4:6520636-6520655 | None:intergenic | 30.0% | |
| GAAATTCAAAATAAAGGACC+AGG | - | chr6_4:6520742-6520761 | None:intergenic | 30.0% | |
| AGACTAGATTGTAGAGAATA+GGG | - | chr6_4:6521066-6521085 | None:intergenic | 30.0% | |
| ! | CTTTTGAACACTTTCTTCTT+TGG | - | chr6_4:6519640-6519659 | None:intergenic | 30.0% |
| !!! | CAAGATTTTGTTGTTGCAAA+GGG | - | chr6_4:6519943-6519962 | None:intergenic | 30.0% |
| !!! | TCAAGATTTTGTTGTTGCAA+AGG | - | chr6_4:6519944-6519963 | None:intergenic | 30.0% |
| GGGATGTCATAATAAGAATT+CGG | - | chr6_4:6520019-6520038 | None:intergenic | 30.0% | |
| GGTTAATAGTAACATTACGA+GGG | - | chr6_4:6520039-6520058 | None:intergenic | 30.0% | |
| ! | ATTAGTTTCAAAGTCTGGTT+TGG | - | chr6_4:6520071-6520090 | None:intergenic | 30.0% |
| ! | TAATTTTATGGATGCAGCAA+GGG | + | chr6_4:6520087-6520106 | Msa0973800:CDS | 30.0% |
| GGAAGAAAAATCTAACTTGA+TGG | + | chr6_4:6520159-6520178 | Msa0973800:CDS | 30.0% | |
| GATCCAATAATTCTTCACAA+TGG | - | chr6_4:6520201-6520220 | None:intergenic | 30.0% | |
| AAAATATCAGATGCCGATAA+AGG | + | chr6_4:6520259-6520278 | Msa0973800:CDS | 30.0% | |
| ATTATGGAAAAGAATGTGCA+CGG | - | chr6_4:6520636-6520655 | None:intergenic | 30.0% | |
| GAAATTCAAAATAAAGGACC+AGG | - | chr6_4:6520742-6520761 | None:intergenic | 30.0% | |
| AGACTAGATTGTAGAGAATA+GGG | - | chr6_4:6521066-6521085 | None:intergenic | 30.0% | |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | - | chr6_4:6519630-6519649 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | - | chr6_4:6519677-6519696 | None:intergenic | 35.0% | |
| GGGTTAATAGTAACATTACG+AGG | - | chr6_4:6520040-6520059 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | - | chr6_4:6520060-6520079 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | - | chr6_4:6520061-6520080 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | + | chr6_4:6520086-6520105 | Msa0973800:CDS | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | + | chr6_4:6520106-6520125 | Msa0973800:CDS | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | + | chr6_4:6520121-6520140 | Msa0973800:CDS | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | + | chr6_4:6520169-6520188 | Msa0973800:CDS | 35.0% |
| TACCTCAGTTACTCCTTTAT+CGG | - | chr6_4:6520275-6520294 | None:intergenic | 35.0% | |
| TCACATGATAAGAAGGTTGA+GGG | + | chr6_4:6520506-6520525 | Msa0973800:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | - | chr6_4:6520572-6520591 | None:intergenic | 35.0% |
| ATGAGCCAATCCGAAAAAAA+TGG | - | chr6_4:6520701-6520720 | None:intergenic | 35.0% | |
| TCTTGCTCTGACTTTAAATG+AGG | + | chr6_4:6520899-6520918 | Msa0973800:intron | 35.0% | |
| ! | TACCAACCTCTAGTTTAACT+CGG | - | chr6_4:6520988-6521007 | None:intergenic | 35.0% |
| TTCATGAGTTAAACGTCTGA+TGG | - | chr6_4:6521016-6521035 | None:intergenic | 35.0% | |
| GAGACTAGATTGTAGAGAAT+AGG | - | chr6_4:6521067-6521086 | None:intergenic | 35.0% | |
| TTGATGTAACAAGGAACCTA+AGG | - | chr6_4:6521111-6521130 | None:intergenic | 35.0% | |
| !! | CTTTCTTCTTTGGAATTTGC+AGG | - | chr6_4:6519630-6519649 | None:intergenic | 35.0% |
| GGTTTATCAGCAGGAAAATA+AGG | - | chr6_4:6519677-6519696 | None:intergenic | 35.0% | |
| GGGTTAATAGTAACATTACG+AGG | - | chr6_4:6520040-6520059 | None:intergenic | 35.0% | |
| !! | AGTCTGGTTTGGTATCAATT+GGG | - | chr6_4:6520060-6520079 | None:intergenic | 35.0% |
| !! | AAGTCTGGTTTGGTATCAAT+TGG | - | chr6_4:6520061-6520080 | None:intergenic | 35.0% |
| ! | CTAATTTTATGGATGCAGCA+AGG | + | chr6_4:6520086-6520105 | Msa0973800:CDS | 35.0% |
| AGGGTTACACAATTGATTAG+TGG | + | chr6_4:6520106-6520125 | Msa0973800:CDS | 35.0% | |
| ! | ATTAGTGGTGTTAGCAATAG+TGG | + | chr6_4:6520121-6520140 | Msa0973800:CDS | 35.0% |
| ! | TCTAACTTGATGGTAACACA+AGG | + | chr6_4:6520169-6520188 | Msa0973800:CDS | 35.0% |
| TACCTCAGTTACTCCTTTAT+CGG | - | chr6_4:6520275-6520294 | None:intergenic | 35.0% | |
| TCACATGATAAGAAGGTTGA+GGG | + | chr6_4:6520506-6520525 | Msa0973800:intron | 35.0% | |
| !! | AAACCTTGTGTTAGTTTGTG+CGG | - | chr6_4:6520572-6520591 | None:intergenic | 35.0% |
| ATGAGCCAATCCGAAAAAAA+TGG | - | chr6_4:6520701-6520720 | None:intergenic | 35.0% | |
| TCTTGCTCTGACTTTAAATG+AGG | + | chr6_4:6520899-6520918 | Msa0973800:intron | 35.0% | |
| ! | TACCAACCTCTAGTTTAACT+CGG | - | chr6_4:6520988-6521007 | None:intergenic | 35.0% |
| TTCATGAGTTAAACGTCTGA+TGG | - | chr6_4:6521016-6521035 | None:intergenic | 35.0% | |
| GAGACTAGATTGTAGAGAAT+AGG | - | chr6_4:6521067-6521086 | None:intergenic | 35.0% | |
| TTGATGTAACAAGGAACCTA+AGG | - | chr6_4:6521111-6521130 | None:intergenic | 35.0% | |
| AACACTTGTGGTTTATCAGC+AGG | - | chr6_4:6519686-6519705 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | + | chr6_4:6519686-6519705 | Msa0973800:CDS | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | + | chr6_4:6520505-6520524 | Msa0973800:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | + | chr6_4:6520571-6520590 | Msa0973800:intron | 40.0% | |
| GTCTCAAAACTTGTACATCC+TGG | + | chr6_4:6520721-6520740 | Msa0973800:intron | 40.0% | |
| AGTCAGAGCAAGACTATGTA+TGG | - | chr6_4:6520892-6520911 | None:intergenic | 40.0% | |
| TTAAATGAGGCTCATGCAAG+CGG | + | chr6_4:6520912-6520931 | Msa0973800:intron | 40.0% | |
| AGATTAAACGTCCTTGGACT+GGG | + | chr6_4:6520955-6520974 | Msa0973800:intron | 40.0% | |
| GGAATACCGAGTTAAACTAG+AGG | + | chr6_4:6520979-6520998 | Msa0973800:intron | 40.0% | |
| TACCGAGTTAAACTAGAGGT+TGG | + | chr6_4:6520983-6521002 | Msa0973800:intron | 40.0% | |
| ! | AACAACCTCTAGTTTGCCTT+AGG | + | chr6_4:6521092-6521111 | Msa0973800:intron | 40.0% |
| AACACTTGTGGTTTATCAGC+AGG | - | chr6_4:6519686-6519705 | None:intergenic | 40.0% | |
| GCTGATAAACCACAAGTGTT+CGG | + | chr6_4:6519686-6519705 | Msa0973800:CDS | 40.0% | |
| CTCACATGATAAGAAGGTTG+AGG | + | chr6_4:6520505-6520524 | Msa0973800:intron | 40.0% | |
| GCACAAACTAACACAAGGTT+TGG | + | chr6_4:6520571-6520590 | Msa0973800:intron | 40.0% | |
| GTCTCAAAACTTGTACATCC+TGG | + | chr6_4:6520721-6520740 | Msa0973800:intron | 40.0% | |
| AGTCAGAGCAAGACTATGTA+TGG | - | chr6_4:6520892-6520911 | None:intergenic | 40.0% | |
| TTAAATGAGGCTCATGCAAG+CGG | + | chr6_4:6520912-6520931 | Msa0973800:intron | 40.0% | |
| AGATTAAACGTCCTTGGACT+GGG | + | chr6_4:6520955-6520974 | Msa0973800:intron | 40.0% | |
| GGAATACCGAGTTAAACTAG+AGG | + | chr6_4:6520979-6520998 | Msa0973800:intron | 40.0% | |
| TACCGAGTTAAACTAGAGGT+TGG | + | chr6_4:6520983-6521002 | Msa0973800:intron | 40.0% | |
| ! | AACAACCTCTAGTTTGCCTT+AGG | + | chr6_4:6521092-6521111 | Msa0973800:intron | 40.0% |
| CATCAAGACATCCACCAACA+GGG | - | chr6_4:6519832-6519851 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | - | chr6_4:6519833-6519852 | None:intergenic | 45.0% | |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | + | chr6_4:6520124-6520143 | Msa0973800:CDS | 45.0% |
| TGCCGATAAAGGAGTAACTG+AGG | + | chr6_4:6520270-6520289 | Msa0973800:CDS | 45.0% | |
| TGTCCGCACAAACTAACACA+AGG | + | chr6_4:6520566-6520585 | Msa0973800:intron | 45.0% | |
| !!! | CAAGGTTTGGTTTTCTGCCA+TGG | + | chr6_4:6520584-6520603 | Msa0973800:intron | 45.0% |
| ATAGGTCTGGGAGATTTCCA+TGG | - | chr6_4:6520604-6520623 | None:intergenic | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | - | chr6_4:6520628-6520647 | None:intergenic | 45.0% | |
| CTCCTCAGATTAAACGTCCT+TGG | + | chr6_4:6520949-6520968 | Msa0973800:intron | 45.0% | |
| GTCCAAGGACGTTTAATCTG+AGG | - | chr6_4:6520954-6520973 | None:intergenic | 45.0% | |
| CAGATTAAACGTCCTTGGAC+TGG | + | chr6_4:6520954-6520973 | Msa0973800:intron | 45.0% | |
| ! | TCATGAAGTGTGTCGATCAC+TGG | + | chr6_4:6521029-6521048 | Msa0973800:intron | 45.0% |
| AGGAACCTAAGGCAAACTAG+AGG | - | chr6_4:6521100-6521119 | None:intergenic | 45.0% | |
| CATCAAGACATCCACCAACA+GGG | - | chr6_4:6519832-6519851 | None:intergenic | 45.0% | |
| ACATCAAGACATCCACCAAC+AGG | - | chr6_4:6519833-6519852 | None:intergenic | 45.0% | |
| ! | AGTGGTGTTAGCAATAGTGG+TGG | + | chr6_4:6520124-6520143 | Msa0973800:CDS | 45.0% |
| TGCCGATAAAGGAGTAACTG+AGG | + | chr6_4:6520270-6520289 | Msa0973800:CDS | 45.0% | |
| TGTCCGCACAAACTAACACA+AGG | + | chr6_4:6520566-6520585 | Msa0973800:intron | 45.0% | |
| !!! | CAAGGTTTGGTTTTCTGCCA+TGG | + | chr6_4:6520584-6520603 | Msa0973800:intron | 45.0% |
| ATAGGTCTGGGAGATTTCCA+TGG | - | chr6_4:6520604-6520623 | None:intergenic | 45.0% | |
| AAAGAATGTGCACGGCTGAA+AGG | - | chr6_4:6520628-6520647 | None:intergenic | 45.0% | |
| CTCCTCAGATTAAACGTCCT+TGG | + | chr6_4:6520949-6520968 | Msa0973800:intron | 45.0% | |
| GTCCAAGGACGTTTAATCTG+AGG | - | chr6_4:6520954-6520973 | None:intergenic | 45.0% | |
| CAGATTAAACGTCCTTGGAC+TGG | + | chr6_4:6520954-6520973 | Msa0973800:intron | 45.0% | |
| ! | TCATGAAGTGTGTCGATCAC+TGG | + | chr6_4:6521029-6521048 | Msa0973800:intron | 45.0% |
| AGGAACCTAAGGCAAACTAG+AGG | - | chr6_4:6521100-6521119 | None:intergenic | 45.0% | |
| CAACAGAGGAGACACAAGCA+AGG | + | chr6_4:6519595-6519614 | Msa0973800:CDS | 50.0% | |
| GGCAACGCTCATCGTTTGTT+TGG | + | chr6_4:6519707-6519726 | Msa0973800:CDS | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | + | chr6_4:6519815-6519834 | Msa0973800:CDS | 50.0% | |
| ! | TCGAGTGCTACTAGAAGGAG+TGG | - | chr6_4:6519993-6520012 | None:intergenic | 50.0% |
| ! | GGAACTCGAGTGCTACTAGA+AGG | - | chr6_4:6519998-6520017 | None:intergenic | 50.0% |
| GGTGTTAGCAATAGTGGTGG+TGG | + | chr6_4:6520127-6520146 | Msa0973800:CDS | 50.0% | |
| !! | TAGTGGTGGTGGCAATGCAA+TGG | + | chr6_4:6520138-6520157 | Msa0973800:CDS | 50.0% |
| ! | CGGCTGAAAGGTATAGGTCT+GGG | - | chr6_4:6520616-6520635 | None:intergenic | 50.0% |
| ! | ACGGCTGAAAGGTATAGGTC+TGG | - | chr6_4:6520617-6520636 | None:intergenic | 50.0% |
| ! | TGTGCACGGCTGAAAGGTAT+AGG | - | chr6_4:6520622-6520641 | None:intergenic | 50.0% |
| ! | TTAAACGTCCTTGGACTGGG+CGG | + | chr6_4:6520958-6520977 | Msa0973800:intron | 50.0% |
| CAACAGAGGAGACACAAGCA+AGG | + | chr6_4:6519595-6519614 | Msa0973800:CDS | 50.0% | |
| GGCAACGCTCATCGTTTGTT+TGG | + | chr6_4:6519707-6519726 | Msa0973800:CDS | 50.0% | |
| ATGCGTGCTCAATTCCCTGT+TGG | + | chr6_4:6519815-6519834 | Msa0973800:CDS | 50.0% | |
| ! | TCGAGTGCTACTAGAAGGAG+TGG | - | chr6_4:6519993-6520012 | None:intergenic | 50.0% |
| ! | GGAACTCGAGTGCTACTAGA+AGG | - | chr6_4:6519998-6520017 | None:intergenic | 50.0% |
| GGTGTTAGCAATAGTGGTGG+TGG | + | chr6_4:6520127-6520146 | Msa0973800:CDS | 50.0% | |
| !! | TAGTGGTGGTGGCAATGCAA+TGG | + | chr6_4:6520138-6520157 | Msa0973800:CDS | 50.0% |
| ! | CGGCTGAAAGGTATAGGTCT+GGG | - | chr6_4:6520616-6520635 | None:intergenic | 50.0% |
| ! | ACGGCTGAAAGGTATAGGTC+TGG | - | chr6_4:6520617-6520636 | None:intergenic | 50.0% |
| ! | TGTGCACGGCTGAAAGGTAT+AGG | - | chr6_4:6520622-6520641 | None:intergenic | 50.0% |
| ! | TTAAACGTCCTTGGACTGGG+CGG | + | chr6_4:6520958-6520977 | Msa0973800:intron | 50.0% |
| ! | TGAGCGTTGCCGAACACTTG+TGG | - | chr6_4:6519698-6519717 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | + | chr6_4:6519818-6519837 | Msa0973800:CDS | 55.0% | |
| ! | TGAGCGTTGCCGAACACTTG+TGG | - | chr6_4:6519698-6519717 | None:intergenic | 55.0% |
| CGTGCTCAATTCCCTGTTGG+TGG | + | chr6_4:6519818-6519837 | Msa0973800:CDS | 55.0% | |
| TCGGTATTCCGCCCAGTCCA+AGG | - | chr6_4:6520969-6520988 | None:intergenic | 60.0% | |
| TCGGTATTCCGCCCAGTCCA+AGG | - | chr6_4:6520969-6520988 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 6519587 | 6521377 | 6519587 | ID=Msa0973800;Name=Msa0973800 |
| chr6_4 | mRNA | 6519587 | 6521377 | 6519587 | ID=Msa0973800-mRNA-1;Parent=Msa0973800;Name=Msa0973800-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.5|1|1|2|0|241 |
| chr6_4 | exon | 6519587 | 6520291 | 6519587 | ID=Msa0973800-mRNA-1:exon:2633;Parent=Msa0973800-mRNA-1 |
| chr6_4 | exon | 6521357 | 6521377 | 6521357 | ID=Msa0973800-mRNA-1:exon:2634;Parent=Msa0973800-mRNA-1 |
| chr6_4 | CDS | 6519587 | 6520291 | 6519587 | ID=Msa0973800-mRNA-1:cds;Parent=Msa0973800-mRNA-1 |
| chr6_4 | CDS | 6521357 | 6521377 | 6521357 | ID=Msa0973800-mRNA-1:cds;Parent=Msa0973800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
