Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974170 | XP_013450939.1 | 68.421 | 513 | 82 | 11 | 15 | 450 | 304 | 813 | 0.0 | 626 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974170 | sp|Q0WPF2|PCFS4_ARATH | 68.627 | 204 | 64 | 0 | 246 | 449 | 586 | 789 | 1.10e-97 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974170 | A0A072U797 | 68.421 | 513 | 82 | 11 | 15 | 450 | 304 | 813 | 0.0 | 626 |
Gene ID | Type | Classification |
---|---|---|
Msa0974170 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974170 | MtrunA17_Chr6g0452881 | 68.421 | 513 | 82 | 11 | 15 | 450 | 304 | 813 | 0.0 | 626 |
Msa0974170 | MtrunA17_Chr6g0452891 | 78.992 | 238 | 26 | 4 | 216 | 450 | 1 | 217 | 3.37e-127 | 367 |
Msa0974170 | MtrunA17_Chr4g0037071 | 83.060 | 183 | 31 | 0 | 268 | 450 | 1 | 183 | 1.01e-101 | 303 |
Msa0974170 | MtrunA17_Chr4g0037081 | 55.090 | 167 | 31 | 5 | 6 | 130 | 15 | 179 | 6.59e-44 | 152 |
Msa0974170 | MtrunA17_Chr1g0179281 | 36.264 | 182 | 110 | 4 | 273 | 450 | 829 | 1008 | 2.30e-34 | 136 |
Msa0974170 | MtrunA17_Chr7g0265781 | 32.870 | 216 | 138 | 5 | 239 | 450 | 803 | 1015 | 1.62e-33 | 134 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974170 | AT4G04885.1 | 68.627 | 204 | 64 | 0 | 246 | 449 | 586 | 789 | 1.11e-98 | 313 |
Msa0974170 | AT1G66500.1 | 35.988 | 339 | 150 | 16 | 159 | 448 | 66 | 386 | 7.83e-50 | 175 |
Msa0974170 | AT5G43620.1 | 45.665 | 173 | 73 | 4 | 285 | 448 | 220 | 380 | 1.89e-45 | 163 |
Msa0974170 | AT2G36480.2 | 33.533 | 167 | 102 | 3 | 282 | 448 | 785 | 942 | 3.12e-25 | 109 |
Msa0974170 | AT2G36480.1 | 33.533 | 167 | 102 | 3 | 282 | 448 | 785 | 942 | 3.12e-25 | 109 |
Find 134 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACGAACCTTGAGAATATT+TGG | 0.171658 | 6_4:-7038298 | None:intergenic |
ACTATACATGTACATAATTT+TGG | 0.185647 | 6_4:-7039359 | None:intergenic |
TCTACCTCTACCCCGAATTT+TGG | 0.203185 | 6_4:+7037986 | Msa0974170:CDS |
CACATAATGCACATGTATTT+TGG | 0.204278 | 6_4:-7038612 | None:intergenic |
GTGACTGCTGTGCTCATCTT+TGG | 0.248435 | 6_4:-7038392 | None:intergenic |
TAGGCATCAATTAGAGCTAT+TGG | 0.294593 | 6_4:-7037372 | None:intergenic |
ATGCCTGTTGTTATTCCATT+AGG | 0.320007 | 6_4:-7038709 | None:intergenic |
TGTCCACTGGTTGGCGAGTT+AGG | 0.324685 | 6_4:-7037786 | None:intergenic |
AAGAGTTGTTTCCGATTCTT+TGG | 0.325210 | 6_4:-7037923 | None:intergenic |
TCAGCGTCAAGGGTGTTTCC+TGG | 0.325987 | 6_4:+7037519 | Msa0974170:CDS |
TCAAAAGTTGCTGGCGAAAC+TGG | 0.326718 | 6_4:-7037570 | None:intergenic |
TCTGTAATCCGTGGCTTATA+TGG | 0.327106 | 6_4:+7038325 | Msa0974170:CDS |
ACACATTAGGACCAAAATTC+GGG | 0.327601 | 6_4:-7037997 | None:intergenic |
GACACATTAGGACCAAAATT+CGG | 0.332257 | 6_4:-7037998 | None:intergenic |
GATTCGAATGGATTCCTAAC+AGG | 0.333615 | 6_4:-7037651 | None:intergenic |
AGATGAAGAGTTGGCTGTTC+CGG | 0.339955 | 6_4:+7038579 | Msa0974170:CDS |
TTATTCCATTAGGCGCATTA+AGG | 0.358655 | 6_4:-7038699 | None:intergenic |
CGAAAAGACAAGAAACTTCA+TGG | 0.371299 | 6_4:+7037403 | Msa0974170:CDS |
TCGTTGTAACTTACGAGTTC+CGG | 0.387658 | 6_4:+7039266 | Msa0974170:three_prime_UTR |
CTGCATTTAGCATGAATAAC+GGG | 0.394865 | 6_4:-7038751 | None:intergenic |
ATGATTCCGACACCAGCAAC+TGG | 0.398413 | 6_4:+7037462 | Msa0974170:CDS |
GGATTCTTCGATGGATATAT+AGG | 0.398722 | 6_4:-7037630 | None:intergenic |
GGCATAACAGGTCGTGCATT+TGG | 0.398786 | 6_4:-7037885 | None:intergenic |
GGCATAGGAAGTGGCATAAC+AGG | 0.399981 | 6_4:-7037897 | None:intergenic |
AAAGAAAGAAGATGAAGAGT+TGG | 0.403383 | 6_4:+7038570 | Msa0974170:CDS |
ACGTGGAGCATGCACATTTA+CGG | 0.404948 | 6_4:-7037604 | None:intergenic |
TTCGGGGTAGAGGTAGAATC+TGG | 0.406226 | 6_4:-7037980 | None:intergenic |
GTAGCGGGCTTCCCAGTTGC+TGG | 0.407709 | 6_4:-7037474 | None:intergenic |
CCGAAGAGGAGGAGTTCAAT+TGG | 0.408130 | 6_4:+7037433 | Msa0974170:CDS |
TAACAGGTCGTGCATTTGGC+AGG | 0.413669 | 6_4:-7037881 | None:intergenic |
CCATGTTCATGCACAGGAAT+AGG | 0.417748 | 6_4:-7037720 | None:intergenic |
GCTTAAAGGTGCCGAGGCAT+TGG | 0.418088 | 6_4:+7038501 | Msa0974170:CDS |
TTGTTTCCGATTCTTTGGTC+TGG | 0.419863 | 6_4:-7037918 | None:intergenic |
ATTTGTTGGTGTTTCTCTCC+TGG | 0.439045 | 6_4:-7037265 | None:intergenic |
AGTGAGACGATGTGGCTTAA+AGG | 0.439793 | 6_4:+7038487 | Msa0974170:CDS |
GTATACCTTAATGCGCCTAA+TGG | 0.441302 | 6_4:+7038694 | Msa0974170:CDS |
CCAATTGAACTCCTCCTCTT+CGG | 0.441961 | 6_4:-7037433 | None:intergenic |
GCTCATCTTTGGATTTGAAT+CGG | 0.447487 | 6_4:-7038381 | None:intergenic |
CTTAAAGGTGCCGAGGCATT+GGG | 0.453885 | 6_4:+7038502 | Msa0974170:CDS |
GCGAGTTAGGCAACTGATGC+AGG | 0.458157 | 6_4:-7037773 | None:intergenic |
TTCCGACCTTTACCTCCAGC+TGG | 0.468020 | 6_4:+7037945 | Msa0974170:CDS |
GCATGGCCAGCTGGAGGTAA+AGG | 0.470453 | 6_4:-7037951 | None:intergenic |
GCATTTGCTGCAATAGTAGC+GGG | 0.472527 | 6_4:-7037489 | None:intergenic |
AAAACTGATGAAGAATTTGT+TGG | 0.474608 | 6_4:-7037279 | None:intergenic |
CTTTGGTCTGGCATAGGAAG+TGG | 0.476736 | 6_4:-7037906 | None:intergenic |
AAAGGAAGAAGATGCTTGCC+AGG | 0.480340 | 6_4:+7037247 | None:intergenic |
GGCTTCCCAGTTGCTGGTGT+CGG | 0.485684 | 6_4:-7037468 | None:intergenic |
GGCATAGACAGGTCGCAGTT+AGG | 0.489584 | 6_4:+7038727 | Msa0974170:CDS |
GCGCCTAATGGAATAACAAC+AGG | 0.497466 | 6_4:+7038706 | Msa0974170:CDS |
CCGATTCTTTGGTCTGGCAT+AGG | 0.499828 | 6_4:-7037912 | None:intergenic |
TGGGGTAGAGCATGGCCAGC+TGG | 0.501385 | 6_4:-7037960 | None:intergenic |
CGAAGAGGAGGAGTTCAATT+GGG | 0.502140 | 6_4:+7037434 | Msa0974170:CDS |
TTGGGAGTCAAGTCAGCTCC+AGG | 0.502567 | 6_4:+7038520 | Msa0974170:CDS |
ACGGAGGAGTGGATGTATAG+AGG | 0.502902 | 6_4:+7038667 | Msa0974170:CDS |
GGCCTCGTTTCAAAAGTTGC+TGG | 0.503897 | 6_4:-7037579 | None:intergenic |
AGCTAATGAGATAACACCTT+GGG | 0.504555 | 6_4:-7038071 | None:intergenic |
TTAGCATTTATTGATTCGAA+TGG | 0.504936 | 6_4:-7037663 | None:intergenic |
CCACAAGTTGTGCACTGTCT+AGG | 0.505428 | 6_4:-7038355 | None:intergenic |
TCACTGTAAAACTCCTCAAA+AGG | 0.506831 | 6_4:-7038640 | None:intergenic |
ATCCATCGAAGAATCCTGTT+AGG | 0.507185 | 6_4:+7037637 | Msa0974170:CDS |
GCCGATTTAGTTACCTCCGC+AGG | 0.507279 | 6_4:-7038103 | None:intergenic |
ATAGCTCTAATTGATGCCTA+TGG | 0.514260 | 6_4:+7037375 | Msa0974170:CDS |
TTCATCACAAAATCTTCAGA+CGG | 0.526226 | 6_4:-7038787 | None:intergenic |
AGGACCAAAATTCGGGGTAG+AGG | 0.526935 | 6_4:-7037990 | None:intergenic |
AGCACAGCAGTCACATGGAT+TGG | 0.529243 | 6_4:+7038401 | Msa0974170:CDS |
CAAAATACATGTGCATTATG+TGG | 0.529245 | 6_4:+7038613 | Msa0974170:CDS |
TGCAACTTCTTCAGCGTCAA+GGG | 0.532463 | 6_4:+7037509 | Msa0974170:CDS |
ACAGGTCGTGCATTTGGCAG+GGG | 0.537469 | 6_4:-7037879 | None:intergenic |
CCTAGACAGTGCACAACTTG+TGG | 0.539415 | 6_4:+7038355 | Msa0974170:CDS |
GGCGGTGTTTGTCCACTGGT+TGG | 0.543540 | 6_4:-7037795 | None:intergenic |
AACAGGTCGTGCATTTGGCA+GGG | 0.545446 | 6_4:-7037880 | None:intergenic |
TCATCACAAAATCTTCAGAC+GGG | 0.546560 | 6_4:-7038786 | None:intergenic |
GAAAGGCGGTGTTTGTCCAC+TGG | 0.548147 | 6_4:-7037799 | None:intergenic |
GAATAACAACAGGCATAGAC+AGG | 0.548628 | 6_4:+7038716 | Msa0974170:CDS |
AAATTAGAATATCCGACAGT+TGG | 0.551878 | 6_4:-7038031 | None:intergenic |
AGCAGAAACCCTCTCGCAAG+TGG | 0.553269 | 6_4:+7038458 | Msa0974170:CDS |
AATATCCGACAGTTGGCTGT+TGG | 0.554695 | 6_4:-7038024 | None:intergenic |
TCTGCATTTAGCATGAATAA+CGG | 0.555648 | 6_4:-7038752 | None:intergenic |
CCTATGCCAGACCAAAGAAT+CGG | 0.556854 | 6_4:+7037912 | Msa0974170:CDS |
ATTAGTTCACTCGTGGCCCA+AGG | 0.558294 | 6_4:+7038055 | Msa0974170:CDS |
CAGGTCGTGCATTTGGCAGG+GGG | 0.562977 | 6_4:-7037878 | None:intergenic |
TTCCTAACAGGATTCTTCGA+TGG | 0.563320 | 6_4:-7037639 | None:intergenic |
ATGCAACTTCTTCAGCGTCA+AGG | 0.564208 | 6_4:+7037508 | Msa0974170:CDS |
AAAGTGAATTGCGACGCTGC+TGG | 0.570896 | 6_4:-7037843 | None:intergenic |
TGCATTTGCTGCAATAGTAG+CGG | 0.574043 | 6_4:-7037490 | None:intergenic |
CTCACAAACCACTTGCGAGA+GGG | 0.577171 | 6_4:-7038466 | None:intergenic |
TAATTTGATTAGTTCACTCG+TGG | 0.577584 | 6_4:+7038048 | Msa0974170:CDS |
GAATATTTGGATCAAACTCA+AGG | 0.580223 | 6_4:-7038285 | None:intergenic |
AGATGAGCACAGCAGTCACA+TGG | 0.587427 | 6_4:+7038396 | Msa0974170:CDS |
GTTTGATCCAAATATTCTCA+AGG | 0.588305 | 6_4:+7038291 | Msa0974170:CDS |
TCGACACCATGTTCATGCAC+AGG | 0.588454 | 6_4:-7037726 | None:intergenic |
CCGATTTAGTTACCTCCGCA+GGG | 0.591874 | 6_4:-7038102 | None:intergenic |
CCTATTCCTGTGCATGAACA+TGG | 0.596190 | 6_4:+7037720 | Msa0974170:CDS |
GAGTTCAGCTATCGCAGCAA+CGG | 0.596554 | 6_4:+7037333 | Msa0974170:CDS |
CATCTTTGGATTTGAATCGG+AGG | 0.601375 | 6_4:-7038378 | None:intergenic |
GTAGAATCTGGGGTAGAGCA+TGG | 0.603093 | 6_4:-7037968 | None:intergenic |
TTGCCTAACTCGCCAACCAG+TGG | 0.608662 | 6_4:+7037783 | Msa0974170:CDS |
AATACTACCACTGTGAGTCA+TGG | 0.609522 | 6_4:+7037684 | Msa0974170:CDS |
GACGCTGCTGGATTCTGAGA+TGG | 0.609727 | 6_4:-7037831 | None:intergenic |
TCGGGGTAGAGGTAGAATCT+GGG | 0.610728 | 6_4:-7037979 | None:intergenic |
GCAGAATCTTCTGAAATACA+TGG | 0.610774 | 6_4:+7039329 | Msa0974170:three_prime_UTR |
TTCTTCGATGGATATATAGG+AGG | 0.611513 | 6_4:-7037627 | None:intergenic |
AAAGTTGCTGGCGAAACTGG+TGG | 0.614136 | 6_4:-7037567 | None:intergenic |
GGCCAGCTGGAGGTAAAGGT+CGG | 0.614768 | 6_4:-7037947 | None:intergenic |
GAAAATCACCATATAAGCCA+CGG | 0.623056 | 6_4:-7038333 | None:intergenic |
TGATTCCGACACCAGCAACT+GGG | 0.627867 | 6_4:+7037463 | Msa0974170:CDS |
AGGTCGTGCATTTGGCAGGG+GGG | 0.628298 | 6_4:-7037877 | None:intergenic |
ATGGAAGAATACCGAAGAGG+AGG | 0.631037 | 6_4:+7037422 | Msa0974170:CDS |
GATGGATATATAGGAGGACG+TGG | 0.633038 | 6_4:-7037621 | None:intergenic |
ACTCACAAACCACTTGCGAG+AGG | 0.633226 | 6_4:-7038467 | None:intergenic |
ACAGTGATGAAACGGAGGAG+TGG | 0.635697 | 6_4:+7038656 | Msa0974170:CDS |
CGTCATAAATCTGTAATCCG+TGG | 0.642310 | 6_4:+7038316 | Msa0974170:CDS |
TGACTTGACTCCCAATGCCT+CGG | 0.643816 | 6_4:-7038512 | None:intergenic |
TCAAGCCAACAGCCAACTGT+CGG | 0.643822 | 6_4:+7038019 | Msa0974170:intron |
GTTGGCTGTTCCGGCCGACG+AGG | 0.646045 | 6_4:+7038588 | Msa0974170:CDS |
TAGCTAATGAGATAACACCT+TGG | 0.648926 | 6_4:-7038072 | None:intergenic |
AGCTAATCAAGCCCCTGCGG+AGG | 0.650230 | 6_4:+7038090 | Msa0974170:CDS |
TCAGTATTAGAATTGAGACC+AGG | 0.658819 | 6_4:-7037537 | None:intergenic |
CAATTCAAACAATAAATGCA+AGG | 0.660363 | 6_4:-7039449 | None:intergenic |
TGCATTTAGCATGAATAACG+GGG | 0.669690 | 6_4:-7038750 | None:intergenic |
GGAGCATGCACATTTACGGA+GGG | 0.674855 | 6_4:-7037600 | None:intergenic |
CGGGGTAGAGGTAGAATCTG+GGG | 0.675595 | 6_4:-7037978 | None:intergenic |
TGGAGCATGCACATTTACGG+AGG | 0.681918 | 6_4:-7037601 | None:intergenic |
GGTAGAGCATGGCCAGCTGG+AGG | 0.682509 | 6_4:-7037957 | None:intergenic |
CGATTTAGTTACCTCCGCAG+GGG | 0.683690 | 6_4:-7038101 | None:intergenic |
TTCATGGAAGAATACCGAAG+AGG | 0.683939 | 6_4:+7037419 | Msa0974170:CDS |
GAACATGGTGTCGAGAACAA+TGG | 0.686510 | 6_4:+7037735 | Msa0974170:CDS |
CACATTAGGACCAAAATTCG+GGG | 0.692250 | 6_4:-7037996 | None:intergenic |
ATTAGCTAATCAAGCCCCTG+CGG | 0.693399 | 6_4:+7038087 | Msa0974170:CDS |
GATGTGGCTTAAAGGTGCCG+AGG | 0.696373 | 6_4:+7038495 | Msa0974170:CDS |
TTGCTGGCGAAACTGGTGGA+TGG | 0.703445 | 6_4:-7037563 | None:intergenic |
GGTTTGTGAGTGAGACGATG+TGG | 0.711325 | 6_4:+7038479 | Msa0974170:CDS |
GCAGTCAAAGAAAACGAATG+CGG | 0.728888 | 6_4:+7039217 | Msa0974170:three_prime_UTR |
AATTAGACCATGACTCACAG+TGG | 0.751691 | 6_4:-7037691 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAATATAATAACAAAAT+TGG | - | chr6_4:7038248-7038267 | None:intergenic | 10.0% |
!! | ACATAATATAATAACAAAAT+TGG | - | chr6_4:7038248-7038267 | None:intergenic | 10.0% |
!! | TGTTATTATATTATGTTTGT+AGG | + | chr6_4:7038252-7038271 | Msa0974170:intron | 15.0% |
!!! | TATATTTTATTGCAATCAAA+AGG | + | chr6_4:7039399-7039418 | Msa0974170:three_prime_UTR | 15.0% |
!! | TGTTATTATATTATGTTTGT+AGG | + | chr6_4:7038252-7038271 | Msa0974170:intron | 15.0% |
!!! | TATATTTTATTGCAATCAAA+AGG | + | chr6_4:7039399-7039418 | Msa0974170:three_prime_UTR | 15.0% |
!! | GTGATATAAAAATTGAACTA+AGG | - | chr6_4:7038195-7038214 | None:intergenic | 20.0% |
!!! | TTATGTTTGTAGGATTTTAT+TGG | + | chr6_4:7038262-7038281 | Msa0974170:intron | 20.0% |
!! | ATTTGTCCATATTATTCTTT+CGG | + | chr6_4:7038853-7038872 | Msa0974170:intron | 20.0% |
!!! | ACTATACATGTACATAATTT+TGG | - | chr6_4:7039362-7039381 | None:intergenic | 20.0% |
!! | GTGATATAAAAATTGAACTA+AGG | - | chr6_4:7038195-7038214 | None:intergenic | 20.0% |
!!! | TTATGTTTGTAGGATTTTAT+TGG | + | chr6_4:7038262-7038281 | Msa0974170:intron | 20.0% |
!! | ATTTGTCCATATTATTCTTT+CGG | + | chr6_4:7038853-7038872 | Msa0974170:intron | 20.0% |
!!! | ACTATACATGTACATAATTT+TGG | - | chr6_4:7039362-7039381 | None:intergenic | 20.0% |
! | AAAACTGATGAAGAATTTGT+TGG | - | chr6_4:7037282-7037301 | None:intergenic | 25.0% |
!!! | TTAGCATTTATTGATTCGAA+TGG | - | chr6_4:7037666-7037685 | None:intergenic | 25.0% |
! | ATGTGCAATTTACGATATAA+TGG | - | chr6_4:7038905-7038924 | None:intergenic | 25.0% |
!! | ATATCGTAAATTGCACATTT+TGG | + | chr6_4:7038907-7038926 | Msa0974170:intron | 25.0% |
!!! | AAAGATGACGGAAAAAAAAT+AGG | - | chr6_4:7038953-7038972 | None:intergenic | 25.0% |
! | AAACATGACATAAAAGATGA+CGG | - | chr6_4:7038965-7038984 | None:intergenic | 25.0% |
!! | TTTATGTCATGTTTTACATG+AGG | + | chr6_4:7038971-7038990 | Msa0974170:intron | 25.0% |
!!! | GTGATGTTATTATTTTCAAG+TGG | + | chr6_4:7039110-7039129 | Msa0974170:intron | 25.0% |
! | TAAGTTACAACGAACAAAAA+TGG | - | chr6_4:7039259-7039278 | None:intergenic | 25.0% |
! | TGAAAAACTACACATTAATC+CGG | - | chr6_4:7039288-7039307 | None:intergenic | 25.0% |
! | AAAACTGATGAAGAATTTGT+TGG | - | chr6_4:7037282-7037301 | None:intergenic | 25.0% |
!!! | TTAGCATTTATTGATTCGAA+TGG | - | chr6_4:7037666-7037685 | None:intergenic | 25.0% |
! | ATGTGCAATTTACGATATAA+TGG | - | chr6_4:7038905-7038924 | None:intergenic | 25.0% |
!! | ATATCGTAAATTGCACATTT+TGG | + | chr6_4:7038907-7038926 | Msa0974170:intron | 25.0% |
!!! | AAAGATGACGGAAAAAAAAT+AGG | - | chr6_4:7038953-7038972 | None:intergenic | 25.0% |
! | AAACATGACATAAAAGATGA+CGG | - | chr6_4:7038965-7038984 | None:intergenic | 25.0% |
!! | TTTATGTCATGTTTTACATG+AGG | + | chr6_4:7038971-7038990 | Msa0974170:intron | 25.0% |
!!! | GTGATGTTATTATTTTCAAG+TGG | + | chr6_4:7039110-7039129 | Msa0974170:intron | 25.0% |
! | TAAGTTACAACGAACAAAAA+TGG | - | chr6_4:7039259-7039278 | None:intergenic | 25.0% |
! | TGAAAAACTACACATTAATC+CGG | - | chr6_4:7039288-7039307 | None:intergenic | 25.0% |
!! | TCATCAAAACATCTTTTTCG+CGG | - | chr6_4:7037315-7037334 | None:intergenic | 30.0% |
AAATTAGAATATCCGACAGT+TGG | - | chr6_4:7038034-7038053 | None:intergenic | 30.0% | |
! | TAATTTGATTAGTTCACTCG+TGG | + | chr6_4:7038048-7038067 | Msa0974170:CDS | 30.0% |
! | CGCAATTAAACAATAATGGA+AGG | - | chr6_4:7038223-7038242 | None:intergenic | 30.0% |
GGTACGCAATTAAACAATAA+TGG | - | chr6_4:7038227-7038246 | None:intergenic | 30.0% | |
GAATATTTGGATCAAACTCA+AGG | - | chr6_4:7038288-7038307 | None:intergenic | 30.0% | |
GTTTGATCCAAATATTCTCA+AGG | + | chr6_4:7038291-7038310 | Msa0974170:CDS | 30.0% | |
! | ATCTTCTTTCTTTTCTTCAG+TGG | - | chr6_4:7038563-7038582 | None:intergenic | 30.0% |
AAAGAAAGAAGATGAAGAGT+TGG | + | chr6_4:7038570-7038589 | Msa0974170:CDS | 30.0% | |
! | CACATAATGCACATGTATTT+TGG | - | chr6_4:7038615-7038634 | None:intergenic | 30.0% |
CAAAATACATGTGCATTATG+TGG | + | chr6_4:7038613-7038632 | Msa0974170:CDS | 30.0% | |
TCTGCATTTAGCATGAATAA+CGG | - | chr6_4:7038755-7038774 | None:intergenic | 30.0% | |
TTCATCACAAAATCTTCAGA+CGG | - | chr6_4:7038790-7038809 | None:intergenic | 30.0% | |
! | AGATTTTGTGATGAAAGAAG+AGG | + | chr6_4:7038795-7038814 | Msa0974170:three_prime_UTR | 30.0% |
AAGTCACCGAAAGAATAATA+TGG | - | chr6_4:7038862-7038881 | None:intergenic | 30.0% | |
! | TGTTTTACATGAGGATATCA+TGG | + | chr6_4:7038980-7038999 | Msa0974170:intron | 30.0% |
!! | ATGTACATAATTTTGGCAAG+AGG | - | chr6_4:7039355-7039374 | None:intergenic | 30.0% |
!! | TCATCAAAACATCTTTTTCG+CGG | - | chr6_4:7037315-7037334 | None:intergenic | 30.0% |
AAATTAGAATATCCGACAGT+TGG | - | chr6_4:7038034-7038053 | None:intergenic | 30.0% | |
! | TAATTTGATTAGTTCACTCG+TGG | + | chr6_4:7038048-7038067 | Msa0974170:CDS | 30.0% |
! | CGCAATTAAACAATAATGGA+AGG | - | chr6_4:7038223-7038242 | None:intergenic | 30.0% |
GGTACGCAATTAAACAATAA+TGG | - | chr6_4:7038227-7038246 | None:intergenic | 30.0% | |
GAATATTTGGATCAAACTCA+AGG | - | chr6_4:7038288-7038307 | None:intergenic | 30.0% | |
GTTTGATCCAAATATTCTCA+AGG | + | chr6_4:7038291-7038310 | Msa0974170:CDS | 30.0% | |
! | ATCTTCTTTCTTTTCTTCAG+TGG | - | chr6_4:7038563-7038582 | None:intergenic | 30.0% |
AAAGAAAGAAGATGAAGAGT+TGG | + | chr6_4:7038570-7038589 | Msa0974170:CDS | 30.0% | |
! | CACATAATGCACATGTATTT+TGG | - | chr6_4:7038615-7038634 | None:intergenic | 30.0% |
CAAAATACATGTGCATTATG+TGG | + | chr6_4:7038613-7038632 | Msa0974170:CDS | 30.0% | |
TCTGCATTTAGCATGAATAA+CGG | - | chr6_4:7038755-7038774 | None:intergenic | 30.0% | |
TTCATCACAAAATCTTCAGA+CGG | - | chr6_4:7038790-7038809 | None:intergenic | 30.0% | |
! | AGATTTTGTGATGAAAGAAG+AGG | + | chr6_4:7038795-7038814 | Msa0974170:three_prime_UTR | 30.0% |
AAGTCACCGAAAGAATAATA+TGG | - | chr6_4:7038862-7038881 | None:intergenic | 30.0% | |
! | TGTTTTACATGAGGATATCA+TGG | + | chr6_4:7038980-7038999 | Msa0974170:intron | 30.0% |
!! | ATGTACATAATTTTGGCAAG+AGG | - | chr6_4:7039355-7039374 | None:intergenic | 30.0% |
TAGGCATCAATTAGAGCTAT+TGG | - | chr6_4:7037375-7037394 | None:intergenic | 35.0% | |
!! | ATAGCTCTAATTGATGCCTA+TGG | + | chr6_4:7037375-7037394 | Msa0974170:CDS | 35.0% |
CGAAAAGACAAGAAACTTCA+TGG | + | chr6_4:7037403-7037422 | Msa0974170:CDS | 35.0% | |
TCAGTATTAGAATTGAGACC+AGG | - | chr6_4:7037540-7037559 | None:intergenic | 35.0% | |
TTCTTCGATGGATATATAGG+AGG | - | chr6_4:7037630-7037649 | None:intergenic | 35.0% | |
GGATTCTTCGATGGATATAT+AGG | - | chr6_4:7037633-7037652 | None:intergenic | 35.0% | |
TGAGATGGAAAAAACTGGAA+AGG | - | chr6_4:7037819-7037838 | None:intergenic | 35.0% | |
!! | GATTCTGAGATGGAAAAAAC+TGG | - | chr6_4:7037824-7037843 | None:intergenic | 35.0% |
! | AAGAGTTGTTTCCGATTCTT+TGG | - | chr6_4:7037926-7037945 | None:intergenic | 35.0% |
ACACATTAGGACCAAAATTC+GGG | - | chr6_4:7038000-7038019 | None:intergenic | 35.0% | |
GACACATTAGGACCAAAATT+CGG | - | chr6_4:7038001-7038020 | None:intergenic | 35.0% | |
AGCTAATGAGATAACACCTT+GGG | - | chr6_4:7038074-7038093 | None:intergenic | 35.0% | |
TAGCTAATGAGATAACACCT+TGG | - | chr6_4:7038075-7038094 | None:intergenic | 35.0% | |
TGACGAACCTTGAGAATATT+TGG | - | chr6_4:7038301-7038320 | None:intergenic | 35.0% | |
GAAAATCACCATATAAGCCA+CGG | - | chr6_4:7038336-7038355 | None:intergenic | 35.0% | |
GCTCATCTTTGGATTTGAAT+CGG | - | chr6_4:7038384-7038403 | None:intergenic | 35.0% | |
! | TTTCTTTTCTTCAGTGGTCT+CGG | - | chr6_4:7038557-7038576 | None:intergenic | 35.0% |
! | ATTATGTGGAGAACCTTTTG+AGG | + | chr6_4:7038627-7038646 | Msa0974170:CDS | 35.0% |
TCACTGTAAAACTCCTCAAA+AGG | - | chr6_4:7038643-7038662 | None:intergenic | 35.0% | |
! | GGAGTTTTACAGTGATGAAA+CGG | + | chr6_4:7038648-7038667 | Msa0974170:CDS | 35.0% |
TTATTCCATTAGGCGCATTA+AGG | - | chr6_4:7038702-7038721 | None:intergenic | 35.0% | |
! | ATGCCTGTTGTTATTCCATT+AGG | - | chr6_4:7038712-7038731 | None:intergenic | 35.0% |
TGCATTTAGCATGAATAACG+GGG | - | chr6_4:7038753-7038772 | None:intergenic | 35.0% | |
CTGCATTTAGCATGAATAAC+GGG | - | chr6_4:7038754-7038773 | None:intergenic | 35.0% | |
TCATCACAAAATCTTCAGAC+GGG | - | chr6_4:7038789-7038808 | None:intergenic | 35.0% | |
! | TTGTTTTCCTCTTTGTATGC+AGG | + | chr6_4:7039179-7039198 | Msa0974170:intron | 35.0% |
! | TGTTTTCCTCTTTGTATGCA+GGG | + | chr6_4:7039180-7039199 | Msa0974170:intron | 35.0% |
!! | GCAGAATCTTCTGAAATACA+TGG | + | chr6_4:7039329-7039348 | Msa0974170:three_prime_UTR | 35.0% |
TAGGCATCAATTAGAGCTAT+TGG | - | chr6_4:7037375-7037394 | None:intergenic | 35.0% | |
!! | ATAGCTCTAATTGATGCCTA+TGG | + | chr6_4:7037375-7037394 | Msa0974170:CDS | 35.0% |
CGAAAAGACAAGAAACTTCA+TGG | + | chr6_4:7037403-7037422 | Msa0974170:CDS | 35.0% | |
TCAGTATTAGAATTGAGACC+AGG | - | chr6_4:7037540-7037559 | None:intergenic | 35.0% | |
TTCTTCGATGGATATATAGG+AGG | - | chr6_4:7037630-7037649 | None:intergenic | 35.0% | |
GGATTCTTCGATGGATATAT+AGG | - | chr6_4:7037633-7037652 | None:intergenic | 35.0% | |
TGAGATGGAAAAAACTGGAA+AGG | - | chr6_4:7037819-7037838 | None:intergenic | 35.0% | |
!! | GATTCTGAGATGGAAAAAAC+TGG | - | chr6_4:7037824-7037843 | None:intergenic | 35.0% |
! | AAGAGTTGTTTCCGATTCTT+TGG | - | chr6_4:7037926-7037945 | None:intergenic | 35.0% |
ACACATTAGGACCAAAATTC+GGG | - | chr6_4:7038000-7038019 | None:intergenic | 35.0% | |
GACACATTAGGACCAAAATT+CGG | - | chr6_4:7038001-7038020 | None:intergenic | 35.0% | |
AGCTAATGAGATAACACCTT+GGG | - | chr6_4:7038074-7038093 | None:intergenic | 35.0% | |
TAGCTAATGAGATAACACCT+TGG | - | chr6_4:7038075-7038094 | None:intergenic | 35.0% | |
TGACGAACCTTGAGAATATT+TGG | - | chr6_4:7038301-7038320 | None:intergenic | 35.0% | |
GAAAATCACCATATAAGCCA+CGG | - | chr6_4:7038336-7038355 | None:intergenic | 35.0% | |
GCTCATCTTTGGATTTGAAT+CGG | - | chr6_4:7038384-7038403 | None:intergenic | 35.0% | |
! | TTTCTTTTCTTCAGTGGTCT+CGG | - | chr6_4:7038557-7038576 | None:intergenic | 35.0% |
! | ATTATGTGGAGAACCTTTTG+AGG | + | chr6_4:7038627-7038646 | Msa0974170:CDS | 35.0% |
TCACTGTAAAACTCCTCAAA+AGG | - | chr6_4:7038643-7038662 | None:intergenic | 35.0% | |
! | GGAGTTTTACAGTGATGAAA+CGG | + | chr6_4:7038648-7038667 | Msa0974170:CDS | 35.0% |
TTATTCCATTAGGCGCATTA+AGG | - | chr6_4:7038702-7038721 | None:intergenic | 35.0% | |
! | ATGCCTGTTGTTATTCCATT+AGG | - | chr6_4:7038712-7038731 | None:intergenic | 35.0% |
TGCATTTAGCATGAATAACG+GGG | - | chr6_4:7038753-7038772 | None:intergenic | 35.0% | |
CTGCATTTAGCATGAATAAC+GGG | - | chr6_4:7038754-7038773 | None:intergenic | 35.0% | |
TCATCACAAAATCTTCAGAC+GGG | - | chr6_4:7038789-7038808 | None:intergenic | 35.0% | |
! | TTGTTTTCCTCTTTGTATGC+AGG | + | chr6_4:7039179-7039198 | Msa0974170:intron | 35.0% |
! | TGTTTTCCTCTTTGTATGCA+GGG | + | chr6_4:7039180-7039199 | Msa0974170:intron | 35.0% |
!! | GCAGAATCTTCTGAAATACA+TGG | + | chr6_4:7039329-7039348 | Msa0974170:three_prime_UTR | 35.0% |
! | ATTTGTTGGTGTTTCTCTCC+TGG | - | chr6_4:7037268-7037287 | None:intergenic | 40.0% |
!! | AGAGCTATTGGATTTTGACG+AGG | - | chr6_4:7037363-7037382 | None:intergenic | 40.0% |
! | TTGTCTTTTCGCACTACCAT+AGG | - | chr6_4:7037394-7037413 | None:intergenic | 40.0% |
TTCATGGAAGAATACCGAAG+AGG | + | chr6_4:7037419-7037438 | Msa0974170:CDS | 40.0% | |
! | TGCATTTGCTGCAATAGTAG+CGG | - | chr6_4:7037493-7037512 | None:intergenic | 40.0% |
ATCCATCGAAGAATCCTGTT+AGG | + | chr6_4:7037637-7037656 | Msa0974170:CDS | 40.0% | |
TTCCTAACAGGATTCTTCGA+TGG | - | chr6_4:7037642-7037661 | None:intergenic | 40.0% | |
! | GATTCGAATGGATTCCTAAC+AGG | - | chr6_4:7037654-7037673 | None:intergenic | 40.0% |
AATACTACCACTGTGAGTCA+TGG | + | chr6_4:7037684-7037703 | Msa0974170:CDS | 40.0% | |
AATTAGACCATGACTCACAG+TGG | - | chr6_4:7037694-7037713 | None:intergenic | 40.0% | |
GATGGAAAAAACTGGAAAGG+CGG | - | chr6_4:7037816-7037835 | None:intergenic | 40.0% | |
TTGTTTCCGATTCTTTGGTC+TGG | - | chr6_4:7037921-7037940 | None:intergenic | 40.0% | |
CACATTAGGACCAAAATTCG+GGG | - | chr6_4:7037999-7038018 | None:intergenic | 40.0% | |
TTGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038171-7038190 | None:intergenic | 40.0% | |
! | ATTGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038172-7038191 | None:intergenic | 40.0% |
CGTCATAAATCTGTAATCCG+TGG | + | chr6_4:7038316-7038335 | Msa0974170:CDS | 40.0% | |
TCTGTAATCCGTGGCTTATA+TGG | + | chr6_4:7038325-7038344 | Msa0974170:CDS | 40.0% | |
CATCTTTGGATTTGAATCGG+AGG | - | chr6_4:7038381-7038400 | None:intergenic | 40.0% | |
!!! | ACATGTATTTTGGTCCTCGT+CGG | - | chr6_4:7038605-7038624 | None:intergenic | 40.0% |
! | GTTTTACAGTGATGAAACGG+AGG | + | chr6_4:7038651-7038670 | Msa0974170:CDS | 40.0% |
GTATACCTTAATGCGCCTAA+TGG | + | chr6_4:7038694-7038713 | Msa0974170:CDS | 40.0% | |
GAATAACAACAGGCATAGAC+AGG | + | chr6_4:7038716-7038735 | Msa0974170:CDS | 40.0% | |
TCACAATAGACTGCAACACT+AGG | + | chr6_4:7039004-7039023 | Msa0974170:intron | 40.0% | |
TGCTTGAAGAAGATCAGAAC+AGG | - | chr6_4:7039143-7039162 | None:intergenic | 40.0% | |
GCAGTCAAAGAAAACGAATG+CGG | + | chr6_4:7039217-7039236 | Msa0974170:three_prime_UTR | 40.0% | |
TCGTTGTAACTTACGAGTTC+CGG | + | chr6_4:7039266-7039285 | Msa0974170:three_prime_UTR | 40.0% | |
GCAAGGAAGTGAAAAATTGC+AGG | - | chr6_4:7039435-7039454 | None:intergenic | 40.0% | |
! | ATTTGTTGGTGTTTCTCTCC+TGG | - | chr6_4:7037268-7037287 | None:intergenic | 40.0% |
!! | AGAGCTATTGGATTTTGACG+AGG | - | chr6_4:7037363-7037382 | None:intergenic | 40.0% |
! | TTGTCTTTTCGCACTACCAT+AGG | - | chr6_4:7037394-7037413 | None:intergenic | 40.0% |
TTCATGGAAGAATACCGAAG+AGG | + | chr6_4:7037419-7037438 | Msa0974170:CDS | 40.0% | |
! | TGCATTTGCTGCAATAGTAG+CGG | - | chr6_4:7037493-7037512 | None:intergenic | 40.0% |
ATCCATCGAAGAATCCTGTT+AGG | + | chr6_4:7037637-7037656 | Msa0974170:CDS | 40.0% | |
TTCCTAACAGGATTCTTCGA+TGG | - | chr6_4:7037642-7037661 | None:intergenic | 40.0% | |
! | GATTCGAATGGATTCCTAAC+AGG | - | chr6_4:7037654-7037673 | None:intergenic | 40.0% |
AATACTACCACTGTGAGTCA+TGG | + | chr6_4:7037684-7037703 | Msa0974170:CDS | 40.0% | |
AATTAGACCATGACTCACAG+TGG | - | chr6_4:7037694-7037713 | None:intergenic | 40.0% | |
GATGGAAAAAACTGGAAAGG+CGG | - | chr6_4:7037816-7037835 | None:intergenic | 40.0% | |
TTGTTTCCGATTCTTTGGTC+TGG | - | chr6_4:7037921-7037940 | None:intergenic | 40.0% | |
CACATTAGGACCAAAATTCG+GGG | - | chr6_4:7037999-7038018 | None:intergenic | 40.0% | |
TTGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038171-7038190 | None:intergenic | 40.0% | |
! | ATTGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038172-7038191 | None:intergenic | 40.0% |
CGTCATAAATCTGTAATCCG+TGG | + | chr6_4:7038316-7038335 | Msa0974170:CDS | 40.0% | |
TCTGTAATCCGTGGCTTATA+TGG | + | chr6_4:7038325-7038344 | Msa0974170:CDS | 40.0% | |
CATCTTTGGATTTGAATCGG+AGG | - | chr6_4:7038381-7038400 | None:intergenic | 40.0% | |
!!! | ACATGTATTTTGGTCCTCGT+CGG | - | chr6_4:7038605-7038624 | None:intergenic | 40.0% |
! | GTTTTACAGTGATGAAACGG+AGG | + | chr6_4:7038651-7038670 | Msa0974170:CDS | 40.0% |
GTATACCTTAATGCGCCTAA+TGG | + | chr6_4:7038694-7038713 | Msa0974170:CDS | 40.0% | |
GAATAACAACAGGCATAGAC+AGG | + | chr6_4:7038716-7038735 | Msa0974170:CDS | 40.0% | |
TCACAATAGACTGCAACACT+AGG | + | chr6_4:7039004-7039023 | Msa0974170:intron | 40.0% | |
TGCTTGAAGAAGATCAGAAC+AGG | - | chr6_4:7039143-7039162 | None:intergenic | 40.0% | |
GCAGTCAAAGAAAACGAATG+CGG | + | chr6_4:7039217-7039236 | Msa0974170:three_prime_UTR | 40.0% | |
TCGTTGTAACTTACGAGTTC+CGG | + | chr6_4:7039266-7039285 | Msa0974170:three_prime_UTR | 40.0% | |
GCAAGGAAGTGAAAAATTGC+AGG | - | chr6_4:7039435-7039454 | None:intergenic | 40.0% | |
ATGGAAGAATACCGAAGAGG+AGG | + | chr6_4:7037422-7037441 | Msa0974170:CDS | 45.0% | |
CCAATTGAACTCCTCCTCTT+CGG | - | chr6_4:7037436-7037455 | None:intergenic | 45.0% | |
CGAAGAGGAGGAGTTCAATT+GGG | + | chr6_4:7037434-7037453 | Msa0974170:CDS | 45.0% | |
! | GCATTTGCTGCAATAGTAGC+GGG | - | chr6_4:7037492-7037511 | None:intergenic | 45.0% |
ATGCAACTTCTTCAGCGTCA+AGG | + | chr6_4:7037508-7037527 | Msa0974170:CDS | 45.0% | |
TGCAACTTCTTCAGCGTCAA+GGG | + | chr6_4:7037509-7037528 | Msa0974170:CDS | 45.0% | |
TCAAAAGTTGCTGGCGAAAC+TGG | - | chr6_4:7037573-7037592 | None:intergenic | 45.0% | |
ACGTGGAGCATGCACATTTA+CGG | - | chr6_4:7037607-7037626 | None:intergenic | 45.0% | |
GATGGATATATAGGAGGACG+TGG | - | chr6_4:7037624-7037643 | None:intergenic | 45.0% | |
CCATGTTCATGCACAGGAAT+AGG | - | chr6_4:7037723-7037742 | None:intergenic | 45.0% | |
CCTATTCCTGTGCATGAACA+TGG | + | chr6_4:7037720-7037739 | Msa0974170:CDS | 45.0% | |
! | GAACATGGTGTCGAGAACAA+TGG | + | chr6_4:7037735-7037754 | Msa0974170:CDS | 45.0% |
CCTATGCCAGACCAAAGAAT+CGG | + | chr6_4:7037912-7037931 | Msa0974170:CDS | 45.0% | |
! | TCTACCTCTACCCCGAATTT+TGG | + | chr6_4:7037986-7038005 | Msa0974170:CDS | 45.0% |
AATATCCGACAGTTGGCTGT+TGG | - | chr6_4:7038027-7038046 | None:intergenic | 45.0% | |
ATTAGCTAATCAAGCCCCTG+CGG | + | chr6_4:7038087-7038106 | Msa0974170:CDS | 45.0% | |
TGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038170-7038189 | None:intergenic | 45.0% | |
AGTGAGACGATGTGGCTTAA+AGG | + | chr6_4:7038487-7038506 | Msa0974170:CDS | 45.0% | |
! | TTTTCTTCAGTGGTCTCGGT+TGG | - | chr6_4:7038553-7038572 | None:intergenic | 45.0% |
AGATGAAGAGTTGGCTGTTC+CGG | + | chr6_4:7038579-7038598 | Msa0974170:CDS | 45.0% | |
GCGCCTAATGGAATAACAAC+AGG | + | chr6_4:7038706-7038725 | Msa0974170:CDS | 45.0% | |
TACGTTCCCTGCATACAAAG+AGG | - | chr6_4:7039189-7039208 | None:intergenic | 45.0% | |
ATGGAAGAATACCGAAGAGG+AGG | + | chr6_4:7037422-7037441 | Msa0974170:CDS | 45.0% | |
CCAATTGAACTCCTCCTCTT+CGG | - | chr6_4:7037436-7037455 | None:intergenic | 45.0% | |
CGAAGAGGAGGAGTTCAATT+GGG | + | chr6_4:7037434-7037453 | Msa0974170:CDS | 45.0% | |
! | GCATTTGCTGCAATAGTAGC+GGG | - | chr6_4:7037492-7037511 | None:intergenic | 45.0% |
ATGCAACTTCTTCAGCGTCA+AGG | + | chr6_4:7037508-7037527 | Msa0974170:CDS | 45.0% | |
TGCAACTTCTTCAGCGTCAA+GGG | + | chr6_4:7037509-7037528 | Msa0974170:CDS | 45.0% | |
TCAAAAGTTGCTGGCGAAAC+TGG | - | chr6_4:7037573-7037592 | None:intergenic | 45.0% | |
ACGTGGAGCATGCACATTTA+CGG | - | chr6_4:7037607-7037626 | None:intergenic | 45.0% | |
GATGGATATATAGGAGGACG+TGG | - | chr6_4:7037624-7037643 | None:intergenic | 45.0% | |
CCATGTTCATGCACAGGAAT+AGG | - | chr6_4:7037723-7037742 | None:intergenic | 45.0% | |
CCTATTCCTGTGCATGAACA+TGG | + | chr6_4:7037720-7037739 | Msa0974170:CDS | 45.0% | |
! | GAACATGGTGTCGAGAACAA+TGG | + | chr6_4:7037735-7037754 | Msa0974170:CDS | 45.0% |
CCTATGCCAGACCAAAGAAT+CGG | + | chr6_4:7037912-7037931 | Msa0974170:CDS | 45.0% | |
! | TCTACCTCTACCCCGAATTT+TGG | + | chr6_4:7037986-7038005 | Msa0974170:CDS | 45.0% |
AATATCCGACAGTTGGCTGT+TGG | - | chr6_4:7038027-7038046 | None:intergenic | 45.0% | |
ATTAGCTAATCAAGCCCCTG+CGG | + | chr6_4:7038087-7038106 | Msa0974170:CDS | 45.0% | |
TGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038170-7038189 | None:intergenic | 45.0% | |
AGTGAGACGATGTGGCTTAA+AGG | + | chr6_4:7038487-7038506 | Msa0974170:CDS | 45.0% | |
! | TTTTCTTCAGTGGTCTCGGT+TGG | - | chr6_4:7038553-7038572 | None:intergenic | 45.0% |
AGATGAAGAGTTGGCTGTTC+CGG | + | chr6_4:7038579-7038598 | Msa0974170:CDS | 45.0% | |
GCGCCTAATGGAATAACAAC+AGG | + | chr6_4:7038706-7038725 | Msa0974170:CDS | 45.0% | |
TACGTTCCCTGCATACAAAG+AGG | - | chr6_4:7039189-7039208 | None:intergenic | 45.0% | |
GAGTTCAGCTATCGCAGCAA+CGG | + | chr6_4:7037333-7037352 | Msa0974170:CDS | 50.0% | |
CCGAAGAGGAGGAGTTCAAT+TGG | + | chr6_4:7037433-7037452 | Msa0974170:CDS | 50.0% | |
ATGATTCCGACACCAGCAAC+TGG | + | chr6_4:7037462-7037481 | Msa0974170:CDS | 50.0% | |
TGATTCCGACACCAGCAACT+GGG | + | chr6_4:7037463-7037482 | Msa0974170:CDS | 50.0% | |
AAAGTTGCTGGCGAAACTGG+TGG | - | chr6_4:7037570-7037589 | None:intergenic | 50.0% | |
!!! | CGCCAGCAACTTTTGAAACG+AGG | + | chr6_4:7037577-7037596 | Msa0974170:CDS | 50.0% |
GGCCTCGTTTCAAAAGTTGC+TGG | - | chr6_4:7037582-7037601 | None:intergenic | 50.0% | |
GGAGCATGCACATTTACGGA+GGG | - | chr6_4:7037603-7037622 | None:intergenic | 50.0% | |
TGGAGCATGCACATTTACGG+AGG | - | chr6_4:7037604-7037623 | None:intergenic | 50.0% | |
TCGACACCATGTTCATGCAC+AGG | - | chr6_4:7037729-7037748 | None:intergenic | 50.0% | |
AAAGTGAATTGCGACGCTGC+TGG | - | chr6_4:7037846-7037865 | None:intergenic | 50.0% | |
AACAGGTCGTGCATTTGGCA+GGG | - | chr6_4:7037883-7037902 | None:intergenic | 50.0% | |
TAACAGGTCGTGCATTTGGC+AGG | - | chr6_4:7037884-7037903 | None:intergenic | 50.0% | |
GGCATAACAGGTCGTGCATT+TGG | - | chr6_4:7037888-7037907 | None:intergenic | 50.0% | |
GGCATAGGAAGTGGCATAAC+AGG | - | chr6_4:7037900-7037919 | None:intergenic | 50.0% | |
CTTTGGTCTGGCATAGGAAG+TGG | - | chr6_4:7037909-7037928 | None:intergenic | 50.0% | |
CCGATTCTTTGGTCTGGCAT+AGG | - | chr6_4:7037915-7037934 | None:intergenic | 50.0% | |
! | GTAGAATCTGGGGTAGAGCA+TGG | - | chr6_4:7037971-7037990 | None:intergenic | 50.0% |
TCGGGGTAGAGGTAGAATCT+GGG | - | chr6_4:7037982-7038001 | None:intergenic | 50.0% | |
TTCGGGGTAGAGGTAGAATC+TGG | - | chr6_4:7037983-7038002 | None:intergenic | 50.0% | |
AGGACCAAAATTCGGGGTAG+AGG | - | chr6_4:7037993-7038012 | None:intergenic | 50.0% | |
!! | GGCTGTTGGCTTGACACATT+AGG | - | chr6_4:7038013-7038032 | None:intergenic | 50.0% |
TCAAGCCAACAGCCAACTGT+CGG | + | chr6_4:7038019-7038038 | Msa0974170:intron | 50.0% | |
ATTAGTTCACTCGTGGCCCA+AGG | + | chr6_4:7038055-7038074 | Msa0974170:CDS | 50.0% | |
CGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038104-7038123 | None:intergenic | 50.0% | |
CCGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038105-7038124 | None:intergenic | 50.0% | |
CCCTGCGGAGGTAACTAAAT+CGG | + | chr6_4:7038102-7038121 | Msa0974170:intron | 50.0% | |
ATCGGCTAATCAAACCCCTG+CGG | + | chr6_4:7038120-7038139 | Msa0974170:intron | 50.0% | |
CGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038104-7038123 | None:intergenic | 50.0% | |
CCGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038105-7038124 | None:intergenic | 50.0% | |
CCCTGCGGAGGTAACTAAAT+CGG | + | chr6_4:7038102-7038121 | Msa0974170:intron | 50.0% | |
CCACAAGTTGTGCACTGTCT+AGG | - | chr6_4:7038358-7038377 | None:intergenic | 50.0% | |
CCTAGACAGTGCACAACTTG+TGG | + | chr6_4:7038355-7038374 | Msa0974170:CDS | 50.0% | |
GTGACTGCTGTGCTCATCTT+TGG | - | chr6_4:7038395-7038414 | None:intergenic | 50.0% | |
AGATGAGCACAGCAGTCACA+TGG | + | chr6_4:7038396-7038415 | Msa0974170:CDS | 50.0% | |
AGCACAGCAGTCACATGGAT+TGG | + | chr6_4:7038401-7038420 | Msa0974170:CDS | 50.0% | |
CTCACAAACCACTTGCGAGA+GGG | - | chr6_4:7038469-7038488 | None:intergenic | 50.0% | |
ACTCACAAACCACTTGCGAG+AGG | - | chr6_4:7038470-7038489 | None:intergenic | 50.0% | |
GGTTTGTGAGTGAGACGATG+TGG | + | chr6_4:7038479-7038498 | Msa0974170:CDS | 50.0% | |
!! | CTTAAAGGTGCCGAGGCATT+GGG | + | chr6_4:7038502-7038521 | Msa0974170:CDS | 50.0% |
TGACTTGACTCCCAATGCCT+CGG | - | chr6_4:7038515-7038534 | None:intergenic | 50.0% | |
GTCTCGGTTGGCAAAAAACC+TGG | - | chr6_4:7038541-7038560 | None:intergenic | 50.0% | |
ACAGTGATGAAACGGAGGAG+TGG | + | chr6_4:7038656-7038675 | Msa0974170:CDS | 50.0% | |
ACGGAGGAGTGGATGTATAG+AGG | + | chr6_4:7038667-7038686 | Msa0974170:CDS | 50.0% | |
GAGTTCAGCTATCGCAGCAA+CGG | + | chr6_4:7037333-7037352 | Msa0974170:CDS | 50.0% | |
CCGAAGAGGAGGAGTTCAAT+TGG | + | chr6_4:7037433-7037452 | Msa0974170:CDS | 50.0% | |
ATGATTCCGACACCAGCAAC+TGG | + | chr6_4:7037462-7037481 | Msa0974170:CDS | 50.0% | |
TGATTCCGACACCAGCAACT+GGG | + | chr6_4:7037463-7037482 | Msa0974170:CDS | 50.0% | |
AAAGTTGCTGGCGAAACTGG+TGG | - | chr6_4:7037570-7037589 | None:intergenic | 50.0% | |
!!! | CGCCAGCAACTTTTGAAACG+AGG | + | chr6_4:7037577-7037596 | Msa0974170:CDS | 50.0% |
GGCCTCGTTTCAAAAGTTGC+TGG | - | chr6_4:7037582-7037601 | None:intergenic | 50.0% | |
GGAGCATGCACATTTACGGA+GGG | - | chr6_4:7037603-7037622 | None:intergenic | 50.0% | |
TGGAGCATGCACATTTACGG+AGG | - | chr6_4:7037604-7037623 | None:intergenic | 50.0% | |
TCGACACCATGTTCATGCAC+AGG | - | chr6_4:7037729-7037748 | None:intergenic | 50.0% | |
AAAGTGAATTGCGACGCTGC+TGG | - | chr6_4:7037846-7037865 | None:intergenic | 50.0% | |
AACAGGTCGTGCATTTGGCA+GGG | - | chr6_4:7037883-7037902 | None:intergenic | 50.0% | |
TAACAGGTCGTGCATTTGGC+AGG | - | chr6_4:7037884-7037903 | None:intergenic | 50.0% | |
GGCATAACAGGTCGTGCATT+TGG | - | chr6_4:7037888-7037907 | None:intergenic | 50.0% | |
GGCATAGGAAGTGGCATAAC+AGG | - | chr6_4:7037900-7037919 | None:intergenic | 50.0% | |
CTTTGGTCTGGCATAGGAAG+TGG | - | chr6_4:7037909-7037928 | None:intergenic | 50.0% | |
CCGATTCTTTGGTCTGGCAT+AGG | - | chr6_4:7037915-7037934 | None:intergenic | 50.0% | |
! | GTAGAATCTGGGGTAGAGCA+TGG | - | chr6_4:7037971-7037990 | None:intergenic | 50.0% |
TCGGGGTAGAGGTAGAATCT+GGG | - | chr6_4:7037982-7038001 | None:intergenic | 50.0% | |
TTCGGGGTAGAGGTAGAATC+TGG | - | chr6_4:7037983-7038002 | None:intergenic | 50.0% | |
AGGACCAAAATTCGGGGTAG+AGG | - | chr6_4:7037993-7038012 | None:intergenic | 50.0% | |
!! | GGCTGTTGGCTTGACACATT+AGG | - | chr6_4:7038013-7038032 | None:intergenic | 50.0% |
TCAAGCCAACAGCCAACTGT+CGG | + | chr6_4:7038019-7038038 | Msa0974170:intron | 50.0% | |
ATTAGTTCACTCGTGGCCCA+AGG | + | chr6_4:7038055-7038074 | Msa0974170:CDS | 50.0% | |
CGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038104-7038123 | None:intergenic | 50.0% | |
CCGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038105-7038124 | None:intergenic | 50.0% | |
CCCTGCGGAGGTAACTAAAT+CGG | + | chr6_4:7038102-7038121 | Msa0974170:intron | 50.0% | |
ATCGGCTAATCAAACCCCTG+CGG | + | chr6_4:7038120-7038139 | Msa0974170:intron | 50.0% | |
CGATTTAGTTACCTCCGCAG+GGG | - | chr6_4:7038104-7038123 | None:intergenic | 50.0% | |
CCGATTTAGTTACCTCCGCA+GGG | - | chr6_4:7038105-7038124 | None:intergenic | 50.0% | |
CCCTGCGGAGGTAACTAAAT+CGG | + | chr6_4:7038102-7038121 | Msa0974170:intron | 50.0% | |
CCACAAGTTGTGCACTGTCT+AGG | - | chr6_4:7038358-7038377 | None:intergenic | 50.0% | |
CCTAGACAGTGCACAACTTG+TGG | + | chr6_4:7038355-7038374 | Msa0974170:CDS | 50.0% | |
GTGACTGCTGTGCTCATCTT+TGG | - | chr6_4:7038395-7038414 | None:intergenic | 50.0% | |
AGATGAGCACAGCAGTCACA+TGG | + | chr6_4:7038396-7038415 | Msa0974170:CDS | 50.0% | |
AGCACAGCAGTCACATGGAT+TGG | + | chr6_4:7038401-7038420 | Msa0974170:CDS | 50.0% | |
CTCACAAACCACTTGCGAGA+GGG | - | chr6_4:7038469-7038488 | None:intergenic | 50.0% | |
ACTCACAAACCACTTGCGAG+AGG | - | chr6_4:7038470-7038489 | None:intergenic | 50.0% | |
GGTTTGTGAGTGAGACGATG+TGG | + | chr6_4:7038479-7038498 | Msa0974170:CDS | 50.0% | |
!! | CTTAAAGGTGCCGAGGCATT+GGG | + | chr6_4:7038502-7038521 | Msa0974170:CDS | 50.0% |
TGACTTGACTCCCAATGCCT+CGG | - | chr6_4:7038515-7038534 | None:intergenic | 50.0% | |
GTCTCGGTTGGCAAAAAACC+TGG | - | chr6_4:7038541-7038560 | None:intergenic | 50.0% | |
ACAGTGATGAAACGGAGGAG+TGG | + | chr6_4:7038656-7038675 | Msa0974170:CDS | 50.0% | |
ACGGAGGAGTGGATGTATAG+AGG | + | chr6_4:7038667-7038686 | Msa0974170:CDS | 50.0% | |
!! | TCAGCGTCAAGGGTGTTTCC+TGG | + | chr6_4:7037519-7037538 | Msa0974170:CDS | 55.0% |
TTGCTGGCGAAACTGGTGGA+TGG | - | chr6_4:7037566-7037585 | None:intergenic | 55.0% | |
GCGAGTTAGGCAACTGATGC+AGG | - | chr6_4:7037776-7037795 | None:intergenic | 55.0% | |
TTGCCTAACTCGCCAACCAG+TGG | + | chr6_4:7037783-7037802 | Msa0974170:CDS | 55.0% | |
! | TGTCCACTGGTTGGCGAGTT+AGG | - | chr6_4:7037789-7037808 | None:intergenic | 55.0% |
GAAAGGCGGTGTTTGTCCAC+TGG | - | chr6_4:7037802-7037821 | None:intergenic | 55.0% | |
! | GACGCTGCTGGATTCTGAGA+TGG | - | chr6_4:7037834-7037853 | None:intergenic | 55.0% |
ACAGGTCGTGCATTTGGCAG+GGG | - | chr6_4:7037882-7037901 | None:intergenic | 55.0% | |
TTCCGACCTTTACCTCCAGC+TGG | + | chr6_4:7037945-7037964 | Msa0974170:CDS | 55.0% | |
CGGGGTAGAGGTAGAATCTG+GGG | - | chr6_4:7037981-7038000 | None:intergenic | 55.0% | |
! | GCCGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038106-7038125 | None:intergenic | 55.0% |
! | GCCGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038106-7038125 | None:intergenic | 55.0% |
ATCGGCTAATCAAGCCCCTG+CGG | + | chr6_4:7038153-7038172 | Msa0974170:intron | 55.0% | |
AGCAGAAACCCTCTCGCAAG+TGG | + | chr6_4:7038458-7038477 | Msa0974170:CDS | 55.0% | |
!! | GATGTGGCTTAAAGGTGCCG+AGG | + | chr6_4:7038495-7038514 | Msa0974170:CDS | 55.0% |
!! | GCTTAAAGGTGCCGAGGCAT+TGG | + | chr6_4:7038501-7038520 | Msa0974170:CDS | 55.0% |
TTGGGAGTCAAGTCAGCTCC+AGG | + | chr6_4:7038520-7038539 | Msa0974170:CDS | 55.0% | |
!!! | GTATTTTGGTCCTCGTCGGC+CGG | - | chr6_4:7038601-7038620 | None:intergenic | 55.0% |
GGCATAGACAGGTCGCAGTT+AGG | + | chr6_4:7038727-7038746 | Msa0974170:CDS | 55.0% | |
!! | TCAGCGTCAAGGGTGTTTCC+TGG | + | chr6_4:7037519-7037538 | Msa0974170:CDS | 55.0% |
TTGCTGGCGAAACTGGTGGA+TGG | - | chr6_4:7037566-7037585 | None:intergenic | 55.0% | |
GCGAGTTAGGCAACTGATGC+AGG | - | chr6_4:7037776-7037795 | None:intergenic | 55.0% | |
TTGCCTAACTCGCCAACCAG+TGG | + | chr6_4:7037783-7037802 | Msa0974170:CDS | 55.0% | |
! | TGTCCACTGGTTGGCGAGTT+AGG | - | chr6_4:7037789-7037808 | None:intergenic | 55.0% |
GAAAGGCGGTGTTTGTCCAC+TGG | - | chr6_4:7037802-7037821 | None:intergenic | 55.0% | |
! | GACGCTGCTGGATTCTGAGA+TGG | - | chr6_4:7037834-7037853 | None:intergenic | 55.0% |
ACAGGTCGTGCATTTGGCAG+GGG | - | chr6_4:7037882-7037901 | None:intergenic | 55.0% | |
TTCCGACCTTTACCTCCAGC+TGG | + | chr6_4:7037945-7037964 | Msa0974170:CDS | 55.0% | |
CGGGGTAGAGGTAGAATCTG+GGG | - | chr6_4:7037981-7038000 | None:intergenic | 55.0% | |
! | GCCGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038106-7038125 | None:intergenic | 55.0% |
! | GCCGATTTAGTTACCTCCGC+AGG | - | chr6_4:7038106-7038125 | None:intergenic | 55.0% |
ATCGGCTAATCAAGCCCCTG+CGG | + | chr6_4:7038153-7038172 | Msa0974170:intron | 55.0% | |
AGCAGAAACCCTCTCGCAAG+TGG | + | chr6_4:7038458-7038477 | Msa0974170:CDS | 55.0% | |
!! | GATGTGGCTTAAAGGTGCCG+AGG | + | chr6_4:7038495-7038514 | Msa0974170:CDS | 55.0% |
!! | GCTTAAAGGTGCCGAGGCAT+TGG | + | chr6_4:7038501-7038520 | Msa0974170:CDS | 55.0% |
TTGGGAGTCAAGTCAGCTCC+AGG | + | chr6_4:7038520-7038539 | Msa0974170:CDS | 55.0% | |
!!! | GTATTTTGGTCCTCGTCGGC+CGG | - | chr6_4:7038601-7038620 | None:intergenic | 55.0% |
GGCATAGACAGGTCGCAGTT+AGG | + | chr6_4:7038727-7038746 | Msa0974170:CDS | 55.0% | |
GGCTTCCCAGTTGCTGGTGT+CGG | - | chr6_4:7037471-7037490 | None:intergenic | 60.0% | |
GGCGGTGTTTGTCCACTGGT+TGG | - | chr6_4:7037798-7037817 | None:intergenic | 60.0% | |
! | TTTGGCAGGGGGGCATGTCT+TGG | - | chr6_4:7037870-7037889 | None:intergenic | 60.0% |
AGGTCGTGCATTTGGCAGGG+GGG | - | chr6_4:7037880-7037899 | None:intergenic | 60.0% | |
CAGGTCGTGCATTTGGCAGG+GGG | - | chr6_4:7037881-7037900 | None:intergenic | 60.0% | |
GGCCAGCTGGAGGTAAAGGT+CGG | - | chr6_4:7037950-7037969 | None:intergenic | 60.0% | |
GCATGGCCAGCTGGAGGTAA+AGG | - | chr6_4:7037954-7037973 | None:intergenic | 60.0% | |
AGCTAATCAAGCCCCTGCGG+AGG | + | chr6_4:7038090-7038109 | Msa0974170:CDS | 60.0% | |
GGCTAATCAAACCCCTGCGG+AGG | + | chr6_4:7038123-7038142 | Msa0974170:intron | 60.0% | |
GGCTTCCCAGTTGCTGGTGT+CGG | - | chr6_4:7037471-7037490 | None:intergenic | 60.0% | |
GGCGGTGTTTGTCCACTGGT+TGG | - | chr6_4:7037798-7037817 | None:intergenic | 60.0% | |
! | TTTGGCAGGGGGGCATGTCT+TGG | - | chr6_4:7037870-7037889 | None:intergenic | 60.0% |
AGGTCGTGCATTTGGCAGGG+GGG | - | chr6_4:7037880-7037899 | None:intergenic | 60.0% | |
CAGGTCGTGCATTTGGCAGG+GGG | - | chr6_4:7037881-7037900 | None:intergenic | 60.0% | |
GGCCAGCTGGAGGTAAAGGT+CGG | - | chr6_4:7037950-7037969 | None:intergenic | 60.0% | |
GCATGGCCAGCTGGAGGTAA+AGG | - | chr6_4:7037954-7037973 | None:intergenic | 60.0% | |
AGCTAATCAAGCCCCTGCGG+AGG | + | chr6_4:7038090-7038109 | Msa0974170:CDS | 60.0% | |
GGCTAATCAAACCCCTGCGG+AGG | + | chr6_4:7038123-7038142 | Msa0974170:intron | 60.0% | |
!! | GTAGCGGGCTTCCCAGTTGC+TGG | - | chr6_4:7037477-7037496 | None:intergenic | 65.0% |
GGTAGAGCATGGCCAGCTGG+AGG | - | chr6_4:7037960-7037979 | None:intergenic | 65.0% | |
TGGGGTAGAGCATGGCCAGC+TGG | - | chr6_4:7037963-7037982 | None:intergenic | 65.0% | |
GGCTAATCAAGCCCCTGCGG+AGG | + | chr6_4:7038156-7038175 | Msa0974170:intron | 65.0% | |
!! | GTAGCGGGCTTCCCAGTTGC+TGG | - | chr6_4:7037477-7037496 | None:intergenic | 65.0% |
GGTAGAGCATGGCCAGCTGG+AGG | - | chr6_4:7037960-7037979 | None:intergenic | 65.0% | |
TGGGGTAGAGCATGGCCAGC+TGG | - | chr6_4:7037963-7037982 | None:intergenic | 65.0% | |
GGCTAATCAAGCCCCTGCGG+AGG | + | chr6_4:7038156-7038175 | Msa0974170:intron | 65.0% | |
GTTGGCTGTTCCGGCCGACG+AGG | + | chr6_4:7038588-7038607 | Msa0974170:CDS | 70.0% | |
GTTGGCTGTTCCGGCCGACG+AGG | + | chr6_4:7038588-7038607 | Msa0974170:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 7037251 | 7039463 | 7037251 | ID=Msa0974170;Name=Msa0974170 |
chr6_4 | mRNA | 7037251 | 7039463 | 7037251 | ID=Msa0974170-mRNA-1;Parent=Msa0974170;Name=Msa0974170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=7|0.66|0.5|1|0|0.25|4|299|450 |
chr6_4 | exon | 7037251 | 7038015 | 7037251 | ID=Msa0974170-mRNA-1:exon:2793;Parent=Msa0974170-mRNA-1 |
chr6_4 | exon | 7038024 | 7038111 | 7038024 | ID=Msa0974170-mRNA-1:exon:2794;Parent=Msa0974170-mRNA-1 |
chr6_4 | exon | 7038274 | 7038816 | 7038274 | ID=Msa0974170-mRNA-1:exon:2795;Parent=Msa0974170-mRNA-1 |
chr6_4 | exon | 7039201 | 7039463 | 7039201 | ID=Msa0974170-mRNA-1:exon:2796;Parent=Msa0974170-mRNA-1 |
chr6_4 | five_prime_UTR | 7037251 | 7037257 | 7037251 | ID=Msa0974170-mRNA-1:five_prime_utr;Parent=Msa0974170-mRNA-1 |
chr6_4 | CDS | 7037258 | 7038015 | 7037258 | ID=Msa0974170-mRNA-1:cds;Parent=Msa0974170-mRNA-1 |
chr6_4 | CDS | 7038024 | 7038111 | 7038024 | ID=Msa0974170-mRNA-1:cds;Parent=Msa0974170-mRNA-1 |
chr6_4 | CDS | 7038274 | 7038780 | 7038274 | ID=Msa0974170-mRNA-1:cds;Parent=Msa0974170-mRNA-1 |
chr6_4 | three_prime_UTR | 7038781 | 7038816 | 7038781 | ID=Msa0974170-mRNA-1:three_prime_utr;Parent=Msa0974170-mRNA-1 |
chr6_4 | three_prime_UTR | 7039201 | 7039463 | 7039201 | ID=Msa0974170-mRNA-1:three_prime_utr;Parent=Msa0974170-mRNA-1 |
Gene Sequence |
Protein sequence |