Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974460 | QDC33489.1 | 98.674 | 377 | 4 | 1 | 1 | 377 | 1 | 376 | 0.0 | 776 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974460 | sp|Q9ZVH0|FEZ_ARATH | 56.584 | 281 | 94 | 8 | 1 | 265 | 1 | 269 | 5.99e-94 | 290 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974460 | A0A4Y5ULM0 | 98.674 | 377 | 4 | 1 | 1 | 377 | 1 | 376 | 0.0 | 776 |
Gene ID | Type | Classification |
---|---|---|
Msa0974460 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974460 | MtrunA17_Chr6g0453131 | 96.570 | 379 | 10 | 2 | 1 | 377 | 1 | 378 | 0.0 | 758 |
Msa0974460 | MtrunA17_Chr8g0361731 | 50.895 | 391 | 169 | 11 | 1 | 377 | 1 | 382 | 9.10e-120 | 352 |
Msa0974460 | MtrunA17_Chr5g0417001 | 71.171 | 222 | 55 | 7 | 1 | 220 | 1 | 215 | 8.26e-107 | 319 |
Msa0974460 | MtrunA17_Chr2g0311651 | 56.842 | 190 | 70 | 5 | 1 | 179 | 3 | 191 | 1.62e-68 | 218 |
Msa0974460 | MtrunA17_Chr5g0442771 | 56.983 | 179 | 65 | 3 | 7 | 174 | 1 | 178 | 4.97e-67 | 214 |
Msa0974460 | MtrunA17_Chr2g0311661 | 44.366 | 284 | 114 | 10 | 1 | 270 | 3 | 256 | 1.86e-66 | 212 |
Msa0974460 | MtrunA17_Chr4g0047841 | 52.910 | 189 | 67 | 6 | 15 | 185 | 15 | 199 | 8.95e-60 | 196 |
Msa0974460 | MtrunA17_Chr2g0318101 | 53.293 | 167 | 74 | 4 | 14 | 177 | 14 | 179 | 2.75e-59 | 196 |
Msa0974460 | MtrunA17_Chr7g0252971 | 54.706 | 170 | 63 | 5 | 14 | 175 | 7 | 170 | 8.88e-58 | 191 |
Msa0974460 | MtrunA17_Chr4g0076731 | 53.374 | 163 | 64 | 3 | 13 | 175 | 52 | 202 | 1.78e-57 | 193 |
Msa0974460 | MtrunA17_Chr2g0309891 | 54.321 | 162 | 64 | 4 | 15 | 175 | 6 | 158 | 2.88e-55 | 185 |
Msa0974460 | MtrunA17_Chr2g0326361 | 49.721 | 179 | 83 | 3 | 17 | 194 | 16 | 188 | 3.09e-55 | 184 |
Msa0974460 | MtrunA17_Chr5g0398971 | 45.128 | 195 | 95 | 2 | 9 | 201 | 1 | 185 | 1.17e-54 | 183 |
Msa0974460 | MtrunA17_Chr5g0417791 | 49.714 | 175 | 81 | 4 | 14 | 188 | 2 | 169 | 3.65e-54 | 179 |
Msa0974460 | MtrunA17_Chr3g0124761 | 49.162 | 179 | 76 | 4 | 15 | 187 | 7 | 176 | 9.14e-54 | 179 |
Msa0974460 | MtrunA17_Chr8g0384721 | 50.877 | 171 | 64 | 4 | 14 | 178 | 6 | 162 | 1.01e-53 | 179 |
Msa0974460 | MtrunA17_Chr3g0130731 | 51.205 | 166 | 72 | 3 | 14 | 179 | 6 | 162 | 1.11e-52 | 176 |
Msa0974460 | MtrunA17_Chr4g0042561 | 50.282 | 177 | 81 | 4 | 7 | 183 | 1 | 170 | 1.17e-52 | 176 |
Msa0974460 | MtrunA17_Chr6g0481091 | 49.412 | 170 | 75 | 3 | 15 | 183 | 6 | 165 | 2.35e-52 | 174 |
Msa0974460 | MtrunA17_Chr2g0318081 | 52.147 | 163 | 67 | 3 | 15 | 177 | 16 | 167 | 2.95e-52 | 177 |
Msa0974460 | MtrunA17_Chr5g0405211 | 46.286 | 175 | 80 | 4 | 17 | 189 | 10 | 172 | 4.81e-52 | 177 |
Msa0974460 | MtrunA17_Chr7g0263931 | 51.205 | 166 | 70 | 4 | 15 | 177 | 11 | 168 | 9.21e-52 | 175 |
Msa0974460 | MtrunA17_Chr4g0018391 | 47.619 | 168 | 74 | 4 | 9 | 174 | 1 | 156 | 1.88e-51 | 175 |
Msa0974460 | MtrunA17_Chr3g0109821 | 50.000 | 166 | 73 | 3 | 15 | 179 | 6 | 162 | 2.00e-51 | 182 |
Msa0974460 | MtrunA17_Chr8g0359921 | 52.147 | 163 | 69 | 3 | 15 | 177 | 14 | 167 | 4.17e-51 | 173 |
Msa0974460 | MtrunA17_Chr5g0433781 | 50.303 | 165 | 71 | 3 | 15 | 178 | 6 | 160 | 5.01e-51 | 180 |
Msa0974460 | MtrunA17_Chr4g0056541 | 45.198 | 177 | 81 | 4 | 9 | 183 | 1 | 163 | 1.17e-50 | 173 |
Msa0974460 | MtrunA17_Chr8g0372121 | 46.341 | 164 | 74 | 4 | 17 | 178 | 8 | 159 | 1.20e-50 | 172 |
Msa0974460 | MtrunA17_Chr4g0060931 | 49.390 | 164 | 74 | 3 | 14 | 177 | 16 | 170 | 3.32e-50 | 172 |
Msa0974460 | MtrunA17_Chr2g0309331 | 45.029 | 171 | 81 | 3 | 17 | 185 | 12 | 171 | 4.15e-50 | 171 |
Msa0974460 | MtrunA17_Chr4g0038751 | 47.541 | 183 | 78 | 5 | 16 | 195 | 16 | 183 | 4.72e-50 | 170 |
Msa0974460 | MtrunA17_Chr5g0400461 | 49.102 | 167 | 66 | 4 | 15 | 174 | 6 | 160 | 3.93e-49 | 169 |
Msa0974460 | MtrunA17_Chr8g0346001 | 42.703 | 185 | 99 | 4 | 1 | 181 | 1 | 182 | 4.01e-49 | 171 |
Msa0974460 | MtrunA17_Chr2g0316971 | 51.807 | 166 | 67 | 4 | 15 | 177 | 23 | 178 | 4.10e-49 | 170 |
Msa0974460 | MtrunA17_Chr4g0017921 | 50.000 | 162 | 66 | 4 | 17 | 176 | 10 | 158 | 5.20e-49 | 169 |
Msa0974460 | MtrunA17_Chr3g0091921 | 47.594 | 187 | 84 | 5 | 15 | 201 | 16 | 188 | 7.21e-49 | 167 |
Msa0974460 | MtrunA17_Chr6g0461661 | 47.514 | 181 | 81 | 6 | 1 | 176 | 1 | 172 | 1.92e-48 | 168 |
Msa0974460 | MtrunA17_Chr6g0453451 | 50.920 | 163 | 71 | 4 | 14 | 176 | 19 | 172 | 3.11e-48 | 166 |
Msa0974460 | MtrunA17_Chr6g0484441 | 42.723 | 213 | 101 | 5 | 13 | 217 | 3 | 202 | 4.53e-48 | 166 |
Msa0974460 | MtrunA17_Chr7g0253011 | 47.977 | 173 | 77 | 4 | 14 | 182 | 16 | 179 | 1.89e-47 | 165 |
Msa0974460 | MtrunA17_Chr1g0200561 | 45.198 | 177 | 80 | 5 | 17 | 191 | 21 | 182 | 3.27e-47 | 164 |
Msa0974460 | MtrunA17_Chr3g0139331 | 49.112 | 169 | 71 | 4 | 11 | 177 | 7 | 162 | 8.15e-47 | 163 |
Msa0974460 | MtrunA17_Chr3g0130101 | 46.584 | 161 | 75 | 4 | 15 | 174 | 7 | 157 | 1.90e-45 | 159 |
Msa0974460 | MtrunA17_Chr2g0312321 | 49.697 | 165 | 71 | 5 | 15 | 179 | 11 | 163 | 3.60e-45 | 157 |
Msa0974460 | MtrunA17_Chr4g0054791 | 48.466 | 163 | 72 | 3 | 15 | 174 | 6 | 159 | 5.13e-45 | 157 |
Msa0974460 | MtrunA17_Chr1g0201021 | 57.364 | 129 | 51 | 3 | 16 | 142 | 20 | 146 | 7.35e-45 | 162 |
Msa0974460 | MtrunA17_Chr7g0214071 | 46.067 | 178 | 80 | 4 | 1 | 177 | 1 | 163 | 8.35e-45 | 155 |
Msa0974460 | MtrunA17_Chr7g0217721 | 47.879 | 165 | 78 | 5 | 18 | 176 | 22 | 184 | 8.98e-45 | 157 |
Msa0974460 | MtrunA17_Chr5g0428991 | 45.402 | 174 | 84 | 3 | 2 | 174 | 12 | 175 | 5.29e-44 | 160 |
Msa0974460 | MtrunA17_Chr8g0364791 | 45.342 | 161 | 77 | 4 | 15 | 174 | 6 | 156 | 9.09e-44 | 157 |
Msa0974460 | MtrunA17_Chr1g0147421 | 41.294 | 201 | 93 | 6 | 2 | 189 | 10 | 198 | 2.37e-43 | 154 |
Msa0974460 | MtrunA17_Chr1g0197351 | 47.239 | 163 | 81 | 3 | 15 | 176 | 42 | 200 | 3.34e-43 | 156 |
Msa0974460 | MtrunA17_Chr7g0217711 | 53.435 | 131 | 59 | 2 | 18 | 148 | 22 | 150 | 2.32e-42 | 146 |
Msa0974460 | MtrunA17_Chr8g0385991 | 44.785 | 163 | 82 | 3 | 10 | 171 | 9 | 164 | 5.99e-42 | 146 |
Msa0974460 | MtrunA17_Chr8g0384201 | 43.478 | 161 | 80 | 4 | 15 | 174 | 6 | 156 | 1.07e-41 | 152 |
Msa0974460 | MtrunA17_Chr1g0183741 | 39.000 | 200 | 104 | 6 | 15 | 213 | 10 | 192 | 2.82e-41 | 146 |
Msa0974460 | MtrunA17_Chr3g0128151 | 43.275 | 171 | 86 | 3 | 7 | 176 | 14 | 174 | 4.40e-41 | 152 |
Msa0974460 | MtrunA17_Chr3g0144271 | 53.077 | 130 | 58 | 3 | 15 | 142 | 23 | 151 | 2.07e-40 | 147 |
Msa0974460 | MtrunA17_Chr3g0128111 | 42.593 | 162 | 78 | 5 | 18 | 176 | 45 | 194 | 5.85e-40 | 142 |
Msa0974460 | MtrunA17_Chr7g0261411 | 43.396 | 159 | 75 | 4 | 15 | 172 | 10 | 154 | 6.60e-39 | 140 |
Msa0974460 | MtrunA17_Chr4g0026141 | 39.691 | 194 | 103 | 5 | 13 | 201 | 3 | 187 | 1.18e-38 | 139 |
Msa0974460 | MtrunA17_Chr2g0321631 | 34.914 | 232 | 132 | 8 | 12 | 231 | 1 | 225 | 2.23e-38 | 138 |
Msa0974460 | MtrunA17_Chr3g0131911 | 42.135 | 178 | 94 | 4 | 3 | 177 | 2 | 173 | 4.52e-38 | 137 |
Msa0974460 | MtrunA17_Chr1g0197361 | 39.560 | 182 | 89 | 6 | 17 | 192 | 10 | 176 | 9.34e-38 | 143 |
Msa0974460 | MtrunA17_Chr3g0092671 | 42.945 | 163 | 80 | 4 | 17 | 177 | 7 | 158 | 1.86e-37 | 141 |
Msa0974460 | MtrunA17_Chr7g0266701 | 37.209 | 172 | 99 | 4 | 12 | 178 | 1 | 168 | 1.64e-35 | 130 |
Msa0974460 | MtrunA17_Chr8g0345671 | 48.905 | 137 | 66 | 4 | 14 | 147 | 10 | 145 | 4.97e-35 | 132 |
Msa0974460 | MtrunA17_Chr8g0345691 | 46.617 | 133 | 67 | 4 | 12 | 141 | 9 | 140 | 1.41e-31 | 123 |
Msa0974460 | MtrunA17_Chr8g0345711 | 38.922 | 167 | 95 | 6 | 12 | 172 | 8 | 173 | 8.60e-31 | 115 |
Msa0974460 | MtrunA17_Chr2g0321741 | 31.855 | 248 | 142 | 10 | 35 | 280 | 12 | 234 | 4.59e-28 | 112 |
Msa0974460 | MtrunA17_Chr3g0113001 | 45.217 | 115 | 52 | 3 | 64 | 176 | 13 | 118 | 9.94e-28 | 110 |
Msa0974460 | MtrunA17_Chr8g0345731 | 44.444 | 135 | 67 | 7 | 14 | 141 | 22 | 155 | 6.96e-27 | 105 |
Msa0974460 | MtrunA17_Chr8g0345721 | 34.857 | 175 | 81 | 4 | 18 | 160 | 38 | 211 | 5.91e-25 | 100 |
Msa0974460 | MtrunA17_Chr4g0050701 | 37.267 | 161 | 88 | 5 | 15 | 174 | 11 | 159 | 3.20e-24 | 98.6 |
Msa0974460 | MtrunA17_Chr8g0345741 | 40.625 | 128 | 72 | 4 | 26 | 150 | 2 | 128 | 1.03e-23 | 95.9 |
Msa0974460 | MtrunA17_Chr8g0345701 | 36.709 | 158 | 72 | 7 | 1 | 141 | 1 | 147 | 1.10e-19 | 85.5 |
Msa0974460 | MtrunA17_Chr3g0113031 | 43.564 | 101 | 45 | 4 | 79 | 176 | 3 | 94 | 5.00e-19 | 85.9 |
Msa0974460 | MtrunA17_Chr8g0384351 | 33.533 | 167 | 76 | 8 | 15 | 179 | 10 | 143 | 1.31e-18 | 82.8 |
Msa0974460 | MtrunA17_Chr7g0251651 | 34.109 | 129 | 81 | 3 | 18 | 145 | 21 | 146 | 1.45e-18 | 83.2 |
Msa0974460 | MtrunA17_Chr7g0251671 | 34.074 | 135 | 81 | 4 | 14 | 145 | 9 | 138 | 1.16e-17 | 79.7 |
Msa0974460 | MtrunA17_Chr7g0243371 | 45.333 | 75 | 40 | 1 | 69 | 142 | 17 | 91 | 1.23e-17 | 78.2 |
Msa0974460 | MtrunA17_Chr7g0251661 | 33.333 | 135 | 86 | 3 | 14 | 147 | 9 | 140 | 1.46e-17 | 79.3 |
Msa0974460 | MtrunA17_Chr3g0130321 | 30.435 | 161 | 103 | 4 | 15 | 173 | 7 | 160 | 7.41e-17 | 78.6 |
Msa0974460 | MtrunA17_Chr1g0194791 | 61.702 | 47 | 17 | 1 | 17 | 62 | 48 | 94 | 7.37e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0974460 | AT1G26870.1 | 56.584 | 281 | 94 | 8 | 1 | 265 | 1 | 269 | 6.09e-95 | 290 |
Msa0974460 | AT5G39820.1 | 64.706 | 204 | 56 | 6 | 1 | 190 | 5 | 206 | 1.58e-90 | 276 |
Msa0974460 | AT2G43000.1 | 61.111 | 162 | 53 | 3 | 16 | 177 | 19 | 170 | 1.91e-70 | 222 |
Msa0974460 | AT3G15510.1 | 49.246 | 199 | 91 | 6 | 19 | 210 | 21 | 216 | 1.16e-58 | 194 |
Msa0974460 | AT3G12910.1 | 56.805 | 169 | 64 | 4 | 16 | 177 | 22 | 188 | 1.21e-58 | 192 |
Msa0974460 | AT2G02450.2 | 53.750 | 160 | 62 | 3 | 15 | 174 | 51 | 198 | 8.39e-58 | 194 |
Msa0974460 | AT2G02450.1 | 53.750 | 160 | 62 | 3 | 15 | 174 | 51 | 198 | 9.98e-58 | 192 |
Msa0974460 | AT1G61110.1 | 53.614 | 166 | 73 | 3 | 15 | 177 | 16 | 180 | 1.25e-57 | 191 |
Msa0974460 | AT3G04070.2 | 53.672 | 177 | 72 | 5 | 15 | 185 | 10 | 182 | 4.62e-57 | 190 |
Msa0974460 | AT4G27410.2 | 53.988 | 163 | 64 | 3 | 15 | 177 | 14 | 165 | 1.82e-54 | 182 |
Msa0974460 | AT3G04070.1 | 48.705 | 193 | 73 | 5 | 15 | 185 | 10 | 198 | 2.28e-54 | 183 |
Msa0974460 | AT1G69490.1 | 49.143 | 175 | 82 | 4 | 7 | 181 | 1 | 168 | 6.92e-54 | 179 |
Msa0974460 | AT3G17730.1 | 51.479 | 169 | 71 | 3 | 15 | 182 | 6 | 164 | 8.76e-54 | 178 |
Msa0974460 | AT1G01720.1 | 52.071 | 169 | 73 | 4 | 9 | 177 | 1 | 161 | 4.28e-53 | 178 |
Msa0974460 | AT5G17260.1 | 52.795 | 161 | 66 | 4 | 15 | 174 | 6 | 157 | 4.79e-53 | 183 |
Msa0974460 | AT5G08790.1 | 50.909 | 165 | 74 | 3 | 14 | 178 | 6 | 163 | 8.59e-53 | 177 |
Msa0974460 | AT3G15500.1 | 52.326 | 172 | 71 | 3 | 6 | 177 | 5 | 165 | 1.10e-52 | 177 |
Msa0974460 | AT3G03200.1 | 40.167 | 239 | 112 | 6 | 15 | 252 | 6 | 214 | 1.49e-52 | 182 |
Msa0974460 | AT1G52890.1 | 51.705 | 176 | 69 | 4 | 7 | 177 | 1 | 165 | 2.13e-52 | 177 |
Msa0974460 | AT1G65910.1 | 51.875 | 160 | 66 | 3 | 17 | 175 | 8 | 157 | 4.42e-52 | 183 |
Msa0974460 | AT4G27410.3 | 49.162 | 179 | 65 | 3 | 15 | 177 | 14 | 182 | 1.15e-51 | 175 |
Msa0974460 | AT5G63790.1 | 50.303 | 165 | 75 | 3 | 14 | 178 | 49 | 206 | 1.45e-51 | 174 |
Msa0974460 | AT5G61430.1 | 50.617 | 162 | 71 | 3 | 14 | 175 | 15 | 167 | 1.56e-51 | 175 |
Msa0974460 | AT5G63790.2 | 50.303 | 165 | 75 | 3 | 14 | 178 | 59 | 216 | 1.59e-51 | 175 |
Msa0974460 | AT2G17040.1 | 48.555 | 173 | 72 | 4 | 13 | 183 | 4 | 161 | 2.03e-51 | 173 |
Msa0974460 | AT4G36160.1 | 48.750 | 160 | 68 | 4 | 17 | 174 | 12 | 159 | 2.13e-51 | 176 |
Msa0974460 | AT4G36160.3 | 48.750 | 160 | 68 | 4 | 17 | 174 | 12 | 159 | 2.13e-51 | 176 |
Msa0974460 | AT4G36160.2 | 48.750 | 160 | 68 | 4 | 17 | 174 | 16 | 163 | 2.34e-51 | 176 |
Msa0974460 | AT2G18060.3 | 48.750 | 160 | 68 | 4 | 17 | 174 | 11 | 158 | 2.94e-51 | 175 |
Msa0974460 | AT2G18060.1 | 48.750 | 160 | 68 | 4 | 17 | 174 | 11 | 158 | 2.94e-51 | 175 |
Msa0974460 | AT1G12260.2 | 48.521 | 169 | 71 | 5 | 9 | 174 | 1 | 156 | 3.40e-51 | 174 |
Msa0974460 | AT1G12260.1 | 48.521 | 169 | 71 | 5 | 9 | 174 | 1 | 156 | 5.16e-51 | 176 |
Msa0974460 | AT3G04060.1 | 50.000 | 164 | 74 | 2 | 11 | 174 | 16 | 171 | 5.17e-51 | 174 |
Msa0974460 | AT4G10350.1 | 48.837 | 172 | 76 | 3 | 17 | 186 | 11 | 172 | 5.40e-51 | 174 |
Msa0974460 | AT1G77450.1 | 50.617 | 162 | 71 | 3 | 17 | 178 | 12 | 164 | 5.45e-51 | 171 |
Msa0974460 | AT5G18270.1 | 48.521 | 169 | 79 | 2 | 14 | 182 | 20 | 180 | 8.66e-51 | 173 |
Msa0974460 | AT5G62380.2 | 49.689 | 161 | 65 | 5 | 17 | 174 | 9 | 156 | 1.23e-50 | 173 |
Msa0974460 | AT5G62380.1 | 49.689 | 161 | 65 | 5 | 17 | 174 | 9 | 156 | 1.23e-50 | 173 |
Msa0974460 | AT5G39610.1 | 43.541 | 209 | 103 | 5 | 14 | 219 | 19 | 215 | 1.83e-50 | 171 |
Msa0974460 | AT4G17980.1 | 51.235 | 162 | 70 | 3 | 15 | 174 | 6 | 160 | 2.56e-50 | 170 |
Msa0974460 | AT5G07680.2 | 50.000 | 162 | 72 | 3 | 14 | 175 | 2 | 154 | 3.06e-50 | 171 |
Msa0974460 | AT5G07680.1 | 50.000 | 162 | 72 | 3 | 14 | 175 | 16 | 168 | 3.34e-50 | 171 |
Msa0974460 | AT4G17980.2 | 51.235 | 162 | 70 | 3 | 15 | 174 | 6 | 160 | 3.34e-50 | 170 |
Msa0974460 | AT5G18270.2 | 47.929 | 169 | 80 | 2 | 14 | 182 | 20 | 180 | 3.78e-50 | 171 |
Msa0974460 | AT1G76420.1 | 48.187 | 193 | 80 | 6 | 2 | 193 | 15 | 188 | 4.50e-50 | 171 |
Msa0974460 | AT3G18400.1 | 49.102 | 167 | 69 | 4 | 13 | 177 | 3 | 155 | 1.68e-49 | 169 |
Msa0974460 | AT5G66300.1 | 44.828 | 174 | 83 | 4 | 17 | 188 | 14 | 176 | 1.89e-49 | 168 |
Msa0974460 | AT1G52880.1 | 52.381 | 168 | 67 | 4 | 19 | 179 | 21 | 182 | 1.94e-49 | 169 |
Msa0974460 | AT1G62700.1 | 48.521 | 169 | 71 | 5 | 9 | 174 | 1 | 156 | 2.07e-49 | 171 |
Msa0974460 | AT1G62700.2 | 48.521 | 169 | 71 | 5 | 9 | 174 | 1 | 156 | 2.07e-49 | 171 |
Msa0974460 | AT1G33280.1 | 51.235 | 162 | 64 | 4 | 17 | 176 | 10 | 158 | 1.20e-48 | 167 |
Msa0974460 | AT1G56010.2 | 49.714 | 175 | 78 | 6 | 2 | 174 | 5 | 171 | 2.16e-48 | 167 |
Msa0974460 | AT1G54330.1 | 51.553 | 161 | 64 | 4 | 15 | 174 | 6 | 153 | 2.50e-48 | 166 |
Msa0974460 | AT2G46770.1 | 40.609 | 197 | 100 | 5 | 1 | 188 | 2 | 190 | 4.88e-48 | 167 |
Msa0974460 | AT2G24430.2 | 48.193 | 166 | 74 | 3 | 13 | 177 | 14 | 168 | 5.19e-48 | 165 |
Msa0974460 | AT2G24430.1 | 48.193 | 166 | 74 | 3 | 13 | 177 | 14 | 168 | 5.19e-48 | 165 |
Msa0974460 | AT3G15170.1 | 45.498 | 211 | 100 | 6 | 13 | 219 | 17 | 216 | 8.22e-48 | 165 |
Msa0974460 | AT1G32770.1 | 43.258 | 178 | 97 | 3 | 2 | 176 | 3 | 179 | 8.38e-47 | 163 |
Msa0974460 | AT5G46590.1 | 48.447 | 161 | 74 | 3 | 15 | 174 | 6 | 158 | 9.05e-47 | 161 |
Msa0974460 | AT5G46590.2 | 53.676 | 136 | 61 | 2 | 15 | 149 | 6 | 140 | 1.36e-46 | 160 |
Msa0974460 | AT5G53950.1 | 52.439 | 164 | 65 | 4 | 15 | 175 | 17 | 170 | 1.58e-46 | 163 |
Msa0974460 | AT3G10500.1 | 48.256 | 172 | 78 | 4 | 7 | 177 | 1 | 162 | 1.64e-46 | 167 |
Msa0974460 | AT1G71930.2 | 43.158 | 190 | 85 | 7 | 12 | 193 | 1 | 175 | 1.73e-46 | 162 |
Msa0974460 | AT1G71930.1 | 43.158 | 190 | 85 | 7 | 12 | 193 | 1 | 175 | 1.73e-46 | 162 |
Msa0974460 | AT1G79580.3 | 45.732 | 164 | 75 | 3 | 17 | 178 | 19 | 170 | 3.79e-46 | 162 |
Msa0974460 | AT1G79580.5 | 45.732 | 164 | 75 | 3 | 17 | 178 | 19 | 170 | 3.79e-46 | 162 |
Msa0974460 | AT1G79580.4 | 45.732 | 164 | 75 | 3 | 17 | 178 | 19 | 170 | 3.79e-46 | 162 |
Msa0974460 | AT1G79580.2 | 45.732 | 164 | 75 | 3 | 17 | 178 | 19 | 170 | 3.79e-46 | 162 |
Msa0974460 | AT1G79580.1 | 45.732 | 164 | 75 | 3 | 17 | 178 | 19 | 170 | 3.79e-46 | 162 |
Msa0974460 | AT3G29035.1 | 57.364 | 129 | 53 | 2 | 14 | 142 | 23 | 149 | 9.07e-46 | 159 |
Msa0974460 | AT5G13180.1 | 47.929 | 169 | 73 | 3 | 10 | 177 | 9 | 163 | 1.45e-45 | 157 |
Msa0974460 | AT3G10480.2 | 47.239 | 163 | 75 | 3 | 15 | 176 | 27 | 179 | 1.63e-45 | 162 |
Msa0974460 | AT1G32510.1 | 40.351 | 228 | 106 | 8 | 15 | 235 | 6 | 210 | 1.65e-45 | 158 |
Msa0974460 | AT5G04410.1 | 43.316 | 187 | 95 | 4 | 7 | 192 | 1 | 177 | 2.23e-45 | 164 |
Msa0974460 | AT3G10490.1 | 46.626 | 163 | 77 | 3 | 15 | 176 | 27 | 180 | 2.27e-45 | 156 |
Msa0974460 | AT3G12977.1 | 40.444 | 225 | 118 | 7 | 3 | 222 | 5 | 218 | 7.19e-45 | 156 |
Msa0974460 | AT3G61910.1 | 40.556 | 180 | 92 | 4 | 7 | 176 | 3 | 177 | 7.23e-45 | 157 |
Msa0974460 | AT3G10480.1 | 47.239 | 163 | 76 | 4 | 15 | 176 | 27 | 180 | 7.40e-45 | 160 |
Msa0974460 | AT3G10490.2 | 46.626 | 163 | 77 | 3 | 15 | 176 | 27 | 180 | 8.42e-44 | 157 |
Msa0974460 | AT1G34190.1 | 47.239 | 163 | 73 | 4 | 17 | 177 | 18 | 169 | 1.04e-43 | 159 |
Msa0974460 | AT5G24590.2 | 44.253 | 174 | 87 | 2 | 4 | 176 | 2 | 166 | 1.27e-43 | 157 |
Msa0974460 | AT2G33480.1 | 44.633 | 177 | 84 | 4 | 1 | 177 | 1 | 163 | 8.94e-43 | 150 |
Msa0974460 | AT2G27300.1 | 40.909 | 176 | 86 | 4 | 1 | 176 | 1 | 158 | 2.58e-42 | 151 |
Msa0974460 | AT5G09330.5 | 44.242 | 165 | 73 | 4 | 15 | 174 | 6 | 156 | 2.71e-42 | 154 |
Msa0974460 | AT5G09330.2 | 44.242 | 165 | 73 | 4 | 15 | 174 | 6 | 156 | 2.71e-42 | 154 |
Msa0974460 | AT5G09330.4 | 44.242 | 165 | 73 | 4 | 15 | 174 | 6 | 156 | 2.71e-42 | 154 |
Msa0974460 | AT5G09330.3 | 44.242 | 165 | 73 | 4 | 15 | 174 | 6 | 156 | 2.71e-42 | 154 |
Msa0974460 | AT5G09330.1 | 44.242 | 165 | 73 | 4 | 15 | 174 | 6 | 156 | 2.71e-42 | 154 |
Msa0974460 | AT3G49530.2 | 39.320 | 206 | 105 | 5 | 7 | 202 | 5 | 200 | 4.99e-42 | 152 |
Msa0974460 | AT1G34180.3 | 54.331 | 127 | 56 | 2 | 17 | 142 | 18 | 143 | 6.41e-42 | 152 |
Msa0974460 | AT4G35580.3 | 45.882 | 170 | 79 | 5 | 7 | 174 | 1 | 159 | 9.87e-42 | 154 |
Msa0974460 | AT3G49530.1 | 39.320 | 206 | 105 | 5 | 7 | 202 | 5 | 200 | 1.04e-41 | 152 |
Msa0974460 | AT4G35580.2 | 45.882 | 170 | 79 | 5 | 7 | 174 | 1 | 159 | 1.15e-41 | 153 |
Msa0974460 | AT4G35580.1 | 45.882 | 170 | 79 | 5 | 7 | 174 | 1 | 159 | 1.25e-41 | 153 |
Msa0974460 | AT1G33060.1 | 43.103 | 174 | 88 | 3 | 2 | 174 | 11 | 174 | 1.48e-41 | 154 |
Msa0974460 | AT1G33060.2 | 43.103 | 174 | 88 | 3 | 2 | 174 | 11 | 174 | 1.58e-41 | 154 |
Msa0974460 | AT1G34180.1 | 54.331 | 127 | 56 | 2 | 17 | 142 | 18 | 143 | 2.30e-41 | 153 |
Msa0974460 | AT2G33480.2 | 44.633 | 177 | 82 | 5 | 1 | 177 | 1 | 161 | 4.61e-41 | 145 |
Msa0974460 | AT3G10480.3 | 39.796 | 196 | 75 | 4 | 15 | 176 | 27 | 213 | 7.32e-41 | 151 |
Msa0974460 | AT5G64060.1 | 42.593 | 162 | 82 | 4 | 14 | 174 | 5 | 156 | 3.62e-40 | 145 |
Msa0974460 | AT1G34180.4 | 49.640 | 139 | 56 | 2 | 17 | 142 | 18 | 155 | 4.34e-40 | 148 |
Msa0974460 | AT1G34180.2 | 49.640 | 139 | 56 | 2 | 17 | 142 | 18 | 155 | 1.25e-39 | 148 |
Msa0974460 | AT4G28530.1 | 42.623 | 183 | 74 | 6 | 15 | 180 | 10 | 178 | 1.85e-39 | 144 |
Msa0974460 | AT5G22290.1 | 40.764 | 157 | 77 | 3 | 15 | 171 | 21 | 161 | 9.66e-39 | 142 |
Msa0974460 | AT3G44290.2 | 39.306 | 173 | 87 | 3 | 12 | 183 | 11 | 166 | 3.84e-38 | 137 |
Msa0974460 | AT3G44290.1 | 39.634 | 164 | 82 | 2 | 12 | 175 | 11 | 157 | 2.06e-37 | 138 |
Msa0974460 | AT5G04395.1 | 42.236 | 161 | 77 | 5 | 15 | 160 | 28 | 187 | 5.33e-35 | 127 |
Msa0974460 | AT1G32870.1 | 43.503 | 177 | 89 | 5 | 15 | 190 | 10 | 176 | 4.78e-34 | 132 |
Msa0974460 | AT1G32870.2 | 43.503 | 177 | 89 | 5 | 15 | 190 | 10 | 176 | 5.33e-34 | 132 |
Msa0974460 | AT1G32870.3 | 42.105 | 190 | 98 | 6 | 3 | 190 | 33 | 212 | 6.71e-34 | 132 |
Msa0974460 | AT2G43000.2 | 57.000 | 100 | 34 | 2 | 78 | 177 | 2 | 92 | 7.17e-33 | 122 |
Msa0974460 | AT5G61430.2 | 50.000 | 112 | 48 | 2 | 64 | 175 | 1 | 104 | 1.11e-32 | 124 |
Msa0974460 | AT1G56010.1 | 51.351 | 111 | 47 | 3 | 64 | 174 | 1 | 104 | 3.01e-31 | 119 |
Msa0974460 | AT3G44350.2 | 35.503 | 169 | 97 | 3 | 13 | 177 | 3 | 163 | 3.67e-31 | 119 |
Msa0974460 | AT5G22380.1 | 37.209 | 172 | 94 | 6 | 12 | 177 | 2 | 165 | 1.12e-30 | 117 |
Msa0974460 | AT3G12977.2 | 39.264 | 163 | 87 | 3 | 63 | 222 | 12 | 165 | 1.43e-30 | 117 |
Msa0974460 | AT4G10350.2 | 46.774 | 124 | 56 | 2 | 63 | 186 | 12 | 125 | 1.68e-30 | 118 |
Msa0974460 | AT3G44350.1 | 37.241 | 145 | 87 | 2 | 13 | 153 | 3 | 147 | 1.40e-29 | 112 |
Msa0974460 | AT4G01550.1 | 43.478 | 138 | 73 | 4 | 12 | 145 | 2 | 138 | 5.71e-28 | 114 |
Msa0974460 | AT5G64530.1 | 39.645 | 169 | 83 | 6 | 15 | 177 | 3 | 158 | 2.84e-26 | 104 |
Msa0974460 | AT5G64530.2 | 42.748 | 131 | 61 | 4 | 14 | 143 | 2 | 119 | 6.32e-26 | 102 |
Msa0974460 | AT4G01520.1 | 42.537 | 134 | 70 | 5 | 18 | 145 | 7 | 139 | 7.43e-26 | 106 |
Msa0974460 | AT4G01540.3 | 42.537 | 134 | 70 | 5 | 18 | 145 | 7 | 139 | 4.46e-25 | 105 |
Msa0974460 | AT4G01540.4 | 42.537 | 134 | 70 | 5 | 18 | 145 | 7 | 139 | 5.24e-25 | 105 |
Msa0974460 | AT4G01540.2 | 42.537 | 134 | 70 | 5 | 18 | 145 | 7 | 139 | 6.59e-25 | 105 |
Msa0974460 | AT4G01540.1 | 42.537 | 134 | 70 | 5 | 18 | 145 | 7 | 139 | 6.82e-25 | 105 |
Msa0974460 | AT4G28530.2 | 45.370 | 108 | 42 | 3 | 15 | 106 | 10 | 116 | 7.23e-21 | 92.4 |
Msa0974460 | AT1G02230.1 | 39.850 | 133 | 72 | 4 | 18 | 145 | 6 | 135 | 8.89e-21 | 92.8 |
Msa0974460 | AT2G33480.3 | 42.202 | 109 | 53 | 3 | 69 | 177 | 8 | 106 | 9.54e-21 | 89.7 |
Msa0974460 | AT2G18060.2 | 51.852 | 81 | 27 | 3 | 94 | 174 | 2 | 70 | 2.18e-20 | 90.5 |
Msa0974460 | AT1G02250.1 | 40.310 | 129 | 69 | 5 | 18 | 141 | 6 | 131 | 2.45e-20 | 91.7 |
Msa0974460 | AT3G04420.2 | 38.095 | 126 | 74 | 3 | 18 | 140 | 6 | 130 | 5.69e-20 | 89.7 |
Msa0974460 | AT3G04420.1 | 38.095 | 126 | 74 | 3 | 18 | 140 | 6 | 130 | 2.15e-19 | 88.6 |
Msa0974460 | AT1G01010.1 | 31.004 | 229 | 128 | 7 | 18 | 236 | 6 | 214 | 6.38e-19 | 88.2 |
Msa0974460 | AT3G04430.1 | 37.879 | 132 | 70 | 3 | 21 | 141 | 6 | 136 | 1.78e-18 | 83.2 |
Msa0974460 | AT3G55210.1 | 30.220 | 182 | 94 | 6 | 15 | 180 | 11 | 175 | 1.63e-17 | 82.4 |
Msa0974460 | AT5G14000.2 | 30.921 | 152 | 99 | 3 | 1 | 150 | 1 | 148 | 4.76e-17 | 78.2 |
Msa0974460 | AT5G14000.1 | 27.568 | 185 | 116 | 4 | 1 | 183 | 1 | 169 | 7.85e-17 | 79.0 |
Msa0974460 | AT1G02220.1 | 38.095 | 126 | 71 | 4 | 18 | 140 | 6 | 127 | 1.96e-16 | 80.5 |
Msa0974460 | AT3G56530.1 | 32.593 | 135 | 88 | 2 | 17 | 149 | 54 | 187 | 6.18e-16 | 78.2 |
Msa0974460 | AT3G10490.4 | 41.573 | 89 | 41 | 3 | 89 | 176 | 2 | 80 | 8.45e-15 | 75.5 |
Msa0974460 | AT3G10490.3 | 41.573 | 89 | 41 | 3 | 89 | 176 | 2 | 80 | 8.45e-15 | 75.5 |
Msa0974460 | AT5G50820.1 | 32.331 | 133 | 74 | 5 | 15 | 142 | 17 | 138 | 1.39e-13 | 69.3 |
Msa0974460 | AT5G22290.2 | 40.260 | 77 | 30 | 3 | 95 | 171 | 2 | 62 | 1.12e-11 | 64.7 |
Find 69 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAGGAATTTGTGAGGATT+TGG | 0.247261 | 6_4:-7518135 | None:intergenic |
TAACCATGCTTCCTGGTAAC+TGG | 0.259108 | 6_4:-7517429 | None:intergenic |
CTTTCCAACACAAACTATAT+TGG | 0.265576 | 6_4:+7518245 | Msa0974460:CDS |
GAGTTACAAGAGCTGGATTT+TGG | 0.268455 | 6_4:+7516620 | Msa0974460:CDS |
GAAGTCACTTGTCTTCTATA+AGG | 0.296503 | 6_4:+7516702 | Msa0974460:CDS |
CTTCAAGTGTGTAGAACATT+AGG | 0.306455 | 6_4:-7518181 | None:intergenic |
CCAGCTCTTGTAACTCTATT+AGG | 0.312453 | 6_4:-7516613 | None:intergenic |
TTGTTGATAGGTTTGTAATT+TGG | 0.312973 | 6_4:-7518098 | None:intergenic |
TCATGCACAACAACAGAATA+TGG | 0.315630 | 6_4:+7517508 | Msa0974460:CDS |
GATGCAAATAATCAATATAA+TGG | 0.359002 | 6_4:+7518275 | Msa0974460:CDS |
TTTCCATCTGATGAGTATAT+AGG | 0.364565 | 6_4:-7516664 | None:intergenic |
TCACAAATTCCTGTTCCTAA+TGG | 0.378078 | 6_4:+7518143 | Msa0974460:CDS |
TCTTGAATATTCACAACGTT+TGG | 0.381035 | 6_4:-7518329 | None:intergenic |
ACTTGCTTAATAAGTTCAAT+AGG | 0.383211 | 6_4:-7515960 | None:intergenic |
CCCACAGATGAAGAGCTTGT+TGG | 0.384548 | 6_4:+7515900 | Msa0974460:CDS |
ATCATCAATTGTGCACTTTG+TGG | 0.389954 | 6_4:-7518213 | None:intergenic |
TTGTACCATGGAAAGGGAAT+TGG | 0.393283 | 6_4:-7517380 | None:intergenic |
ATTGGATGATGCATGAGTTT+AGG | 0.393794 | 6_4:+7516752 | Msa0974460:CDS |
AATTCATTAACCATGCTTCC+TGG | 0.399214 | 6_4:-7517436 | None:intergenic |
CTTAATCAATGGGAAAATCT+TGG | 0.415172 | 6_4:+7518362 | Msa0974460:CDS |
GTCCTCAAAGCATCAAAACT+TGG | 0.429523 | 6_4:-7518416 | None:intergenic |
GGAAGGCAACTGGAACTGAT+AGG | 0.433013 | 6_4:+7516641 | Msa0974460:CDS |
ATCAAATGCAGCTTAATCAA+TGG | 0.439366 | 6_4:+7518351 | Msa0974460:CDS |
ATTGTGTTGATGTTGTTGAT+AGG | 0.466813 | 6_4:-7518110 | None:intergenic |
AAGTCACTTGTCTTCTATAA+GGG | 0.469878 | 6_4:+7516703 | Msa0974460:CDS |
AAGGTTGATGATTTGATGCC+TGG | 0.470160 | 6_4:+7515864 | Msa0974460:CDS |
TCAAATGCAGCTTAATCAAT+GGG | 0.472008 | 6_4:+7518352 | Msa0974460:CDS |
AAAACCAATATAGTTTGTGT+TGG | 0.476473 | 6_4:-7518249 | None:intergenic |
CCTAATAGAGTTACAAGAGC+TGG | 0.479097 | 6_4:+7516613 | Msa0974460:CDS |
ATAATGTCTCCATTAGGAAC+AGG | 0.480950 | 6_4:-7518152 | None:intergenic |
TTATCAATAATGTCTCCATT+AGG | 0.481250 | 6_4:-7518158 | None:intergenic |
AAACTTGGAGACAAATTGAA+TGG | 0.481553 | 6_4:-7518401 | None:intergenic |
TATAAGAATTCTTACTTGGA+AGG | 0.484332 | 6_4:-7516010 | None:intergenic |
TTCTTACTTGGAAGGTCCCA+TGG | 0.492827 | 6_4:-7516002 | None:intergenic |
CCTTGGATCTCCCAGTTACC+AGG | 0.495317 | 6_4:+7517418 | Msa0974460:CDS |
CCAAAGGGATGAAAACTGAT+TGG | 0.497200 | 6_4:+7516734 | Msa0974460:CDS |
AACCATGCTTCCTGGTAACT+GGG | 0.505975 | 6_4:-7517428 | None:intergenic |
AAAATCTGAAGCTGAGAAGT+TGG | 0.514553 | 6_4:-7518075 | None:intergenic |
ACCAACAAGCTCTTCATCTG+TGG | 0.517278 | 6_4:-7515901 | None:intergenic |
TATTGAACTTATTAAGCAAG+TGG | 0.518925 | 6_4:+7515962 | Msa0974460:CDS |
GAAAACCAATTCCCTTTCCA+TGG | 0.519977 | 6_4:+7517375 | Msa0974460:CDS |
TCATCAGATGGAAAATGCAT+TGG | 0.527545 | 6_4:+7516673 | Msa0974460:CDS |
TGTGCACTTTGTGGAACCAT+TGG | 0.528605 | 6_4:-7518204 | None:intergenic |
AGGATTCATGGGCAATCTGT+AGG | 0.535758 | 6_4:+7517344 | Msa0974460:intron |
TGAAGCTGAGAAGTTGGCAT+TGG | 0.539735 | 6_4:-7518069 | None:intergenic |
GTGGGATGAAAACGAAAGCC+AGG | 0.544940 | 6_4:-7515882 | None:intergenic |
AATGGTATTTCTATTGTCCA+AGG | 0.545816 | 6_4:+7516563 | Msa0974460:CDS |
ATATTTACAAACATGATCCA+TGG | 0.555585 | 6_4:+7515985 | Msa0974460:CDS |
ACGTTTGGTTGCATATCTTG+AGG | 0.556521 | 6_4:-7518314 | None:intergenic |
CCTGGTAACTGGGAGATCCA+AGG | 0.558240 | 6_4:-7517418 | None:intergenic |
CATGGAGGAAAGAACTGAGA+TGG | 0.565541 | 6_4:+7515833 | None:intergenic |
CTGGTAACTGGGAGATCCAA+GGG | 0.568030 | 6_4:-7517417 | None:intergenic |
ACAGAATATGGATCATCAGC+AGG | 0.569614 | 6_4:+7517520 | Msa0974460:CDS |
CTCCCAGTTACCAGGAAGCA+TGG | 0.571720 | 6_4:+7517426 | Msa0974460:CDS |
TATTTACAAACATGATCCAT+GGG | 0.576790 | 6_4:+7515986 | Msa0974460:CDS |
TTCTACACACTTGAAGCCAA+TGG | 0.578960 | 6_4:+7518188 | Msa0974460:CDS |
AGGCCTATATACTCATCAGA+TGG | 0.580727 | 6_4:+7516661 | Msa0974460:CDS |
CAAGAAGAGCTAGCAAGTAG+TGG | 0.581972 | 6_4:+7516532 | Msa0974460:intron |
CTTTGAGGACTAGTGTCACA+TGG | 0.584308 | 6_4:+7518429 | Msa0974460:CDS |
CCAACAAGCTCTTCATCTGT+GGG | 0.588377 | 6_4:-7515900 | None:intergenic |
ATAAGGGTAGAGCTGCCAAA+GGG | 0.609579 | 6_4:+7516719 | Msa0974460:CDS |
GTGGACATTTAACTAGTGCA+AGG | 0.616121 | 6_4:-7518461 | None:intergenic |
ATGGTATTTCTATTGTCCAA+GGG | 0.621463 | 6_4:+7516564 | Msa0974460:CDS |
ATTAGGAACAGGAATTTGTG+AGG | 0.633156 | 6_4:-7518141 | None:intergenic |
AACTGAGATGGATATTAACA+AGG | 0.642088 | 6_4:+7515845 | Msa0974460:CDS |
TATAAGGGTAGAGCTGCCAA+AGG | 0.669349 | 6_4:+7516718 | Msa0974460:CDS |
TTTGAGGACTAGTGTCACAT+GGG | 0.697215 | 6_4:+7518430 | Msa0974460:CDS |
GTGTTTGAATCTGAAATGCA+TGG | 0.704846 | 6_4:-7516778 | None:intergenic |
GACATTTAACTAGTGCAAGG+TGG | 0.757546 | 6_4:-7518458 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACACAAAATTTTAAATATTA+AGG | + | chr6_4:7516115-7516134 | Msa0974460:intron | 10.0% |
!! | TAATGAATAAAAAATTTGTA+GGG | - | chr6_4:7516188-7516207 | None:intergenic | 10.0% |
!!! | TTTTATGTTTTCAATTTAAT+TGG | - | chr6_4:7516459-7516478 | None:intergenic | 10.0% |
!!! | TATCTAGAAATTTTATTAAA+TGG | - | chr6_4:7516955-7516974 | None:intergenic | 10.0% |
!!! | ATTTAATGGATAAAATTATT+AGG | - | chr6_4:7518016-7518035 | None:intergenic | 10.0% |
!! | AATATTAGAAAAAGGAAAAT+GGG | - | chr6_4:7516081-7516100 | None:intergenic | 15.0% |
!!! | TTTAGAACAATATTAGAAAA+AGG | - | chr6_4:7516089-7516108 | None:intergenic | 15.0% |
!! | CTAATGAATAAAAAATTTGT+AGG | - | chr6_4:7516189-7516208 | None:intergenic | 15.0% |
!!! | TTTTAATTAATTTCTTTGCA+AGG | + | chr6_4:7516240-7516259 | Msa0974460:intron | 15.0% |
!!! | AAATTAAACATAGTCTTTTT+TGG | - | chr6_4:7516267-7516286 | None:intergenic | 15.0% |
!! | ATAAAAGATGAAGATTAAAA+TGG | + | chr6_4:7516288-7516307 | Msa0974460:intron | 15.0% |
!!! | AAAATGAAGTTAACATTTTT+TGG | - | chr6_4:7516501-7516520 | None:intergenic | 15.0% |
!! | TTAAATAGTAAAAATGAGAT+AGG | - | chr6_4:7516870-7516889 | None:intergenic | 15.0% |
!!! | TTCATACTATGTTTTTTTAA+AGG | - | chr6_4:7517118-7517137 | None:intergenic | 15.0% |
!! | TTTATTCCAAATGTAAAAAT+TGG | - | chr6_4:7517167-7517186 | None:intergenic | 15.0% |
!!! | TATTATTTTCTGAACAAAAT+TGG | - | chr6_4:7517486-7517505 | None:intergenic | 15.0% |
!! | CAATATTAGAAAAAGGAAAA+TGG | - | chr6_4:7516082-7516101 | None:intergenic | 20.0% |
!! | TGGTAAATAAGATAGAATAT+AGG | - | chr6_4:7516439-7516458 | None:intergenic | 20.0% |
!!! | CTTTTATCTGAAAACTTTTT+AGG | - | chr6_4:7516808-7516827 | None:intergenic | 20.0% |
!! | AATACTAAAACACTTACATT+TGG | - | chr6_4:7516838-7516857 | None:intergenic | 20.0% |
!!! | TTTCTTCCAATTTTTACATT+TGG | + | chr6_4:7517158-7517177 | Msa0974460:intron | 20.0% |
!! | GATGCAAATAATCAATATAA+TGG | + | chr6_4:7518275-7518294 | Msa0974460:CDS | 20.0% |
! | ACTTGCTTAATAAGTTCAAT+AGG | - | chr6_4:7515963-7515982 | None:intergenic | 25.0% |
! | TATTGAACTTATTAAGCAAG+TGG | + | chr6_4:7515962-7515981 | Msa0974460:CDS | 25.0% |
! | ATATTTACAAACATGATCCA+TGG | + | chr6_4:7515985-7516004 | Msa0974460:CDS | 25.0% |
! | TATTTACAAACATGATCCAT+GGG | + | chr6_4:7515986-7516005 | Msa0974460:CDS | 25.0% |
! | TATAAGAATTCTTACTTGGA+AGG | - | chr6_4:7516013-7516032 | None:intergenic | 25.0% |
! | GTGTTATAAGAATTCTTACT+TGG | - | chr6_4:7516017-7516036 | None:intergenic | 25.0% |
!! | TGGATAAGAAAATGATGTTT+TGG | + | chr6_4:7516308-7516327 | Msa0974460:intron | 25.0% |
!!! | TTATCTGAAAACTTTTTAGG+AGG | - | chr6_4:7516805-7516824 | None:intergenic | 25.0% |
! | AATAGTAAAAATGAGATAGG+TGG | - | chr6_4:7516867-7516886 | None:intergenic | 25.0% |
! | CATAAAGGACTAATCAAAAT+TGG | - | chr6_4:7517316-7517335 | None:intergenic | 25.0% |
!! | TAGTCCTTTATGAATTTTTC+AGG | + | chr6_4:7517324-7517343 | Msa0974460:intron | 25.0% |
! | GAATCCTGAAAAATTCATAA+AGG | - | chr6_4:7517331-7517350 | None:intergenic | 25.0% |
!!! | TATGAATTTTTCAGGATTCA+TGG | + | chr6_4:7517332-7517351 | Msa0974460:intron | 25.0% |
!!! | ATGAATTTTTCAGGATTCAT+GGG | + | chr6_4:7517333-7517352 | Msa0974460:intron | 25.0% |
! | AAACTTACAAATGTAAGTGT+TGG | + | chr6_4:7517546-7517565 | Msa0974460:intron | 25.0% |
! | AAAGGACCTACAAAAAATTA+TGG | + | chr6_4:7517889-7517908 | Msa0974460:intron | 25.0% |
!!! | CAGAATCCATAATTTTTTGT+AGG | - | chr6_4:7517898-7517917 | None:intergenic | 25.0% |
! | CTTGTTGCTACAAAATTTAA+TGG | - | chr6_4:7518030-7518049 | None:intergenic | 25.0% |
!! | TTGTTGATAGGTTTGTAATT+TGG | - | chr6_4:7518101-7518120 | None:intergenic | 25.0% |
! | TTATCAATAATGTCTCCATT+AGG | - | chr6_4:7518161-7518180 | None:intergenic | 25.0% |
!! | AAAACCAATATAGTTTGTGT+TGG | - | chr6_4:7518252-7518271 | None:intergenic | 25.0% |
AACTGAGATGGATATTAACA+AGG | + | chr6_4:7515845-7515864 | Msa0974460:CDS | 30.0% | |
! | TTTGCTGAATTTTTCTCTTG+AGG | - | chr6_4:7515932-7515951 | None:intergenic | 30.0% |
! | AATGGTATTTCTATTGTCCA+AGG | + | chr6_4:7516563-7516582 | Msa0974460:CDS | 30.0% |
! | ATGGTATTTCTATTGTCCAA+GGG | + | chr6_4:7516564-7516583 | Msa0974460:CDS | 30.0% |
! | TTTCTATATTTTCTGTCCCT+TGG | - | chr6_4:7516583-7516602 | None:intergenic | 30.0% |
TTTCCATCTGATGAGTATAT+AGG | - | chr6_4:7516667-7516686 | None:intergenic | 30.0% | |
AAGTCACTTGTCTTCTATAA+GGG | + | chr6_4:7516703-7516722 | Msa0974460:CDS | 30.0% | |
! | GTAAATGATAGATGATGGTT+TGG | + | chr6_4:7517032-7517051 | Msa0974460:intron | 30.0% |
TTAATTGAGTGAAACTCATG+TGG | + | chr6_4:7517851-7517870 | Msa0974460:intron | 30.0% | |
!!! | AGGTCCTTTTTCAAAATTGT+GGG | - | chr6_4:7517878-7517897 | None:intergenic | 30.0% |
!!! | TAGGTCCTTTTTCAAAATTG+TGG | - | chr6_4:7517879-7517898 | None:intergenic | 30.0% |
CCTAATAAGAGAGATAACAT+CGG | + | chr6_4:7517929-7517948 | Msa0974460:intron | 30.0% | |
AAATTTGTAGTGAGTAGTAC+CGG | - | chr6_4:7517980-7517999 | None:intergenic | 30.0% | |
! | ATTGTGTTGATGTTGTTGAT+AGG | - | chr6_4:7518113-7518132 | None:intergenic | 30.0% |
CTTTCCAACACAAACTATAT+TGG | + | chr6_4:7518245-7518264 | Msa0974460:CDS | 30.0% | |
TCTTGAATATTCACAACGTT+TGG | - | chr6_4:7518332-7518351 | None:intergenic | 30.0% | |
ATCAAATGCAGCTTAATCAA+TGG | + | chr6_4:7518351-7518370 | Msa0974460:CDS | 30.0% | |
TCAAATGCAGCTTAATCAAT+GGG | + | chr6_4:7518352-7518371 | Msa0974460:CDS | 30.0% | |
CTTAATCAATGGGAAAATCT+TGG | + | chr6_4:7518362-7518381 | Msa0974460:CDS | 30.0% | |
AAACTTGGAGACAAATTGAA+TGG | - | chr6_4:7518404-7518423 | None:intergenic | 30.0% | |
CAAGTAGTGGTGAAAAAGAA+TGG | + | chr6_4:7516545-7516564 | Msa0974460:CDS | 35.0% | |
TCATCAGATGGAAAATGCAT+TGG | + | chr6_4:7516673-7516692 | Msa0974460:CDS | 35.0% | |
GAAGTCACTTGTCTTCTATA+AGG | + | chr6_4:7516702-7516721 | Msa0974460:CDS | 35.0% | |
ATTGGATGATGCATGAGTTT+AGG | + | chr6_4:7516752-7516771 | Msa0974460:CDS | 35.0% | |
! | GTGTTTGAATCTGAAATGCA+TGG | - | chr6_4:7516781-7516800 | None:intergenic | 35.0% |
GTGCTGTAAATGATAGATGA+TGG | + | chr6_4:7517027-7517046 | Msa0974460:intron | 35.0% | |
! | AATGATAGATGATGGTTTGG+AGG | + | chr6_4:7517035-7517054 | Msa0974460:intron | 35.0% |
AAAAGACATCTCAACTAGGT+TGG | - | chr6_4:7517063-7517082 | None:intergenic | 35.0% | |
AAAGGAAACAATAGAGTGCA+TGG | - | chr6_4:7517100-7517119 | None:intergenic | 35.0% | |
!! | TGCTTTTTGTACCATGGAAA+GGG | - | chr6_4:7517389-7517408 | None:intergenic | 35.0% |
!! | ATGCTTTTTGTACCATGGAA+AGG | - | chr6_4:7517390-7517409 | None:intergenic | 35.0% |
!! | AGACAATGCTTTTTGTACCA+TGG | - | chr6_4:7517395-7517414 | None:intergenic | 35.0% |
AATTCATTAACCATGCTTCC+TGG | - | chr6_4:7517439-7517458 | None:intergenic | 35.0% | |
TCATGCACAACAACAGAATA+TGG | + | chr6_4:7517508-7517527 | Msa0974460:CDS | 35.0% | |
!! | TGGTCCCACAATTTTGAAAA+AGG | + | chr6_4:7517871-7517890 | Msa0974460:intron | 35.0% |
CCGATGTTATCTCTCTTATT+AGG | - | chr6_4:7517932-7517951 | None:intergenic | 35.0% | |
AGTGTTAGAGTTAGTATTGC+CGG | + | chr6_4:7517958-7517977 | Msa0974460:intron | 35.0% | |
! | AAAATCTGAAGCTGAGAAGT+TGG | - | chr6_4:7518078-7518097 | None:intergenic | 35.0% |
AACAGGAATTTGTGAGGATT+TGG | - | chr6_4:7518138-7518157 | None:intergenic | 35.0% | |
ATTAGGAACAGGAATTTGTG+AGG | - | chr6_4:7518144-7518163 | None:intergenic | 35.0% | |
TCACAAATTCCTGTTCCTAA+TGG | + | chr6_4:7518143-7518162 | Msa0974460:CDS | 35.0% | |
ATAATGTCTCCATTAGGAAC+AGG | - | chr6_4:7518155-7518174 | None:intergenic | 35.0% | |
CTTCAAGTGTGTAGAACATT+AGG | - | chr6_4:7518184-7518203 | None:intergenic | 35.0% | |
ATCATCAATTGTGCACTTTG+TGG | - | chr6_4:7518216-7518235 | None:intergenic | 35.0% | |
!! | AAGGTTGATGATTTGATGCC+TGG | + | chr6_4:7515864-7515883 | Msa0974460:CDS | 40.0% |
CCAGCTCTTGTAACTCTATT+AGG | - | chr6_4:7516616-7516635 | None:intergenic | 40.0% | |
CCTAATAGAGTTACAAGAGC+TGG | + | chr6_4:7516613-7516632 | Msa0974460:CDS | 40.0% | |
! | GAGTTACAAGAGCTGGATTT+TGG | + | chr6_4:7516620-7516639 | Msa0974460:CDS | 40.0% |
! | TACAAGAGCTGGATTTTGGA+AGG | + | chr6_4:7516624-7516643 | Msa0974460:CDS | 40.0% |
AGGCCTATATACTCATCAGA+TGG | + | chr6_4:7516661-7516680 | Msa0974460:CDS | 40.0% | |
! | CCAATCAGTTTTCATCCCTT+TGG | - | chr6_4:7516737-7516756 | None:intergenic | 40.0% |
CCAAAGGGATGAAAACTGAT+TGG | + | chr6_4:7516734-7516753 | Msa0974460:CDS | 40.0% | |
GCAGAAAAGACATCTCAACT+AGG | - | chr6_4:7517067-7517086 | None:intergenic | 40.0% | |
TAGAGTGCATGGACATCAAA+CGG | - | chr6_4:7517089-7517108 | None:intergenic | 40.0% | |
GAAAACCAATTCCCTTTCCA+TGG | + | chr6_4:7517375-7517394 | Msa0974460:CDS | 40.0% | |
TTGTACCATGGAAAGGGAAT+TGG | - | chr6_4:7517383-7517402 | None:intergenic | 40.0% | |
!! | AAAAAGCATTGTCTCACCCT+TGG | + | chr6_4:7517401-7517420 | Msa0974460:CDS | 40.0% |
ACAGAATATGGATCATCAGC+AGG | + | chr6_4:7517520-7517539 | Msa0974460:CDS | 40.0% | |
TTCTACACACTTGAAGCCAA+TGG | + | chr6_4:7518188-7518207 | Msa0974460:CDS | 40.0% | |
ACGTTTGGTTGCATATCTTG+AGG | - | chr6_4:7518317-7518336 | None:intergenic | 40.0% | |
!! | CTCCAAGTTTTGATGCTTTG+AGG | + | chr6_4:7518414-7518433 | Msa0974460:CDS | 40.0% |
! | GTCCTCAAAGCATCAAAACT+TGG | - | chr6_4:7518419-7518438 | None:intergenic | 40.0% |
! | TTTGAGGACTAGTGTCACAT+GGG | + | chr6_4:7518430-7518449 | Msa0974460:CDS | 40.0% |
CCAACAAGCTCTTCATCTGT+GGG | - | chr6_4:7515903-7515922 | None:intergenic | 45.0% | |
ACCAACAAGCTCTTCATCTG+TGG | - | chr6_4:7515904-7515923 | None:intergenic | 45.0% | |
TTCTTACTTGGAAGGTCCCA+TGG | - | chr6_4:7516005-7516024 | None:intergenic | 45.0% | |
CAAGAAGAGCTAGCAAGTAG+TGG | + | chr6_4:7516532-7516551 | Msa0974460:intron | 45.0% | |
TATAAGGGTAGAGCTGCCAA+AGG | + | chr6_4:7516718-7516737 | Msa0974460:CDS | 45.0% | |
ATAAGGGTAGAGCTGCCAAA+GGG | + | chr6_4:7516719-7516738 | Msa0974460:CDS | 45.0% | |
AGGATTCATGGGCAATCTGT+AGG | + | chr6_4:7517344-7517363 | Msa0974460:intron | 45.0% | |
AACCATGCTTCCTGGTAACT+GGG | - | chr6_4:7517431-7517450 | None:intergenic | 45.0% | |
TAACCATGCTTCCTGGTAAC+TGG | - | chr6_4:7517432-7517451 | None:intergenic | 45.0% | |
TGAAGCTGAGAAGTTGGCAT+TGG | - | chr6_4:7518072-7518091 | None:intergenic | 45.0% | |
TGTGCACTTTGTGGAACCAT+TGG | - | chr6_4:7518207-7518226 | None:intergenic | 45.0% | |
! | CTTTGAGGACTAGTGTCACA+TGG | + | chr6_4:7518429-7518448 | Msa0974460:CDS | 45.0% |
!!! | TTTTTATAAAAGATATATAT+GGG | - | chr6_4:7516212-7516231 | None:intergenic | 5.0% |
!!! | ATTTTTATAAAAGATATATA+TGG | - | chr6_4:7516213-7516232 | None:intergenic | 5.0% |
!!! | ATATATCTTTTATAAAAATA+TGG | + | chr6_4:7516214-7516233 | Msa0974460:intron | 5.0% |
GTGGGATGAAAACGAAAGCC+AGG | - | chr6_4:7515885-7515904 | None:intergenic | 50.0% | |
CCCACAGATGAAGAGCTTGT+TGG | + | chr6_4:7515900-7515919 | Msa0974460:CDS | 50.0% | |
!! | GCTGGATTTTGGAAGGCAAC+TGG | + | chr6_4:7516631-7516650 | Msa0974460:CDS | 50.0% |
GGAAGGCAACTGGAACTGAT+AGG | + | chr6_4:7516641-7516660 | Msa0974460:CDS | 50.0% | |
CTGGTAACTGGGAGATCCAA+GGG | - | chr6_4:7517420-7517439 | None:intergenic | 50.0% | |
CCTGGTAACTGGGAGATCCA+AGG | - | chr6_4:7517421-7517440 | None:intergenic | 55.0% | |
CCTTGGATCTCCCAGTTACC+AGG | + | chr6_4:7517418-7517437 | Msa0974460:CDS | 55.0% | |
CTCCCAGTTACCAGGAAGCA+TGG | + | chr6_4:7517426-7517445 | Msa0974460:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 7515834 | 7518475 | 7515834 | ID=Msa0974460;Name=Msa0974460 |
chr6_4 | mRNA | 7515834 | 7518475 | 7515834 | ID=Msa0974460-mRNA-1;Parent=Msa0974460;Name=Msa0974460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|377 |
chr6_4 | exon | 7515834 | 7516017 | 7515834 | ID=Msa0974460-mRNA-1:exon:2907;Parent=Msa0974460-mRNA-1 |
chr6_4 | exon | 7516536 | 7516840 | 7516536 | ID=Msa0974460-mRNA-1:exon:2908;Parent=Msa0974460-mRNA-1 |
chr6_4 | exon | 7517346 | 7517557 | 7517346 | ID=Msa0974460-mRNA-1:exon:2909;Parent=Msa0974460-mRNA-1 |
chr6_4 | exon | 7518043 | 7518475 | 7518043 | ID=Msa0974460-mRNA-1:exon:2910;Parent=Msa0974460-mRNA-1 |
chr6_4 | CDS | 7515834 | 7516017 | 7515834 | ID=Msa0974460-mRNA-1:cds;Parent=Msa0974460-mRNA-1 |
chr6_4 | CDS | 7516536 | 7516840 | 7516536 | ID=Msa0974460-mRNA-1:cds;Parent=Msa0974460-mRNA-1 |
chr6_4 | CDS | 7517346 | 7517557 | 7517346 | ID=Msa0974460-mRNA-1:cds;Parent=Msa0974460-mRNA-1 |
chr6_4 | CDS | 7518043 | 7518475 | 7518043 | ID=Msa0974460-mRNA-1:cds;Parent=Msa0974460-mRNA-1 |
Gene Sequence |
Protein sequence |