AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0974720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0974720 MtrunA17_Chr6g0453451 95.000 160 8 0 1 160 1 160 2.66e-115 329
Msa0974720 MtrunA17_Chr4g0060931 77.083 144 33 0 15 158 12 155 1.83e-83 249
Msa0974720 MtrunA17_Chr3g0091921 72.727 154 42 0 5 158 1 154 2.84e-80 239
Msa0974720 MtrunA17_Chr7g0253011 69.536 151 42 1 11 157 8 158 4.92e-76 231
Msa0974720 MtrunA17_Chr6g0461661 72.297 148 39 1 13 158 11 158 2.14e-75 229
Msa0974720 MtrunA17_Chr6g0484441 76.154 130 31 0 20 149 5 134 1.76e-74 226
Msa0974720 MtrunA17_Chr2g0316971 73.050 141 36 1 20 158 23 163 3.62e-73 224
Msa0974720 MtrunA17_Chr7g0217721 68.831 154 47 1 2 154 1 154 4.12e-73 223
Msa0974720 MtrunA17_Chr7g0217711 68.966 145 45 0 2 146 1 145 1.37e-70 211
Msa0974720 MtrunA17_Chr1g0147421 70.588 136 37 2 20 152 27 162 6.19e-68 210
Msa0974720 MtrunA17_Chr3g0144271 62.874 167 55 4 1 160 1 167 4.77e-66 207
Msa0974720 MtrunA17_Chr3g0139331 72.093 129 34 1 20 146 11 139 6.28e-65 202
Msa0974720 MtrunA17_Chr2g0312321 63.043 138 47 2 19 155 10 144 2.62e-59 186
Msa0974720 MtrunA17_Chr2g0309891 55.769 156 55 2 20 161 6 161 5.09e-57 181
Msa0974720 MtrunA17_Chr3g0124761 62.121 132 49 1 17 148 4 134 3.17e-56 178
Msa0974720 MtrunA17_Chr7g0252971 59.124 137 47 1 20 147 8 144 3.80e-55 176
Msa0974720 MtrunA17_Chr7g0263931 58.904 146 53 2 5 148 1 141 3.98e-55 176
Msa0974720 MtrunA17_Chr8g0359921 56.944 144 62 0 17 160 11 154 1.10e-54 175
Msa0974720 MtrunA17_Chr8g0372121 60.769 130 48 1 20 146 6 135 1.55e-54 174
Msa0974720 MtrunA17_Chr4g0017921 63.359 131 45 1 20 147 8 138 3.31e-54 174
Msa0974720 MtrunA17_Chr5g0417791 56.643 143 62 0 19 161 2 144 3.38e-54 172
Msa0974720 MtrunA17_Chr4g0042561 59.701 134 54 0 12 145 1 134 5.15e-54 172
Msa0974720 MtrunA17_Chr4g0018391 60.000 130 49 1 20 146 7 136 6.21e-54 174
Msa0974720 MtrunA17_Chr4g0056541 60.000 130 49 1 20 146 7 136 9.07e-54 174
Msa0974720 MtrunA17_Chr5g0405211 60.000 130 49 1 20 146 8 137 9.44e-54 173
Msa0974720 MtrunA17_Chr2g0318081 60.606 132 52 0 17 148 13 144 9.50e-54 173
Msa0974720 MtrunA17_Chr8g0384721 62.595 131 48 1 18 148 5 134 1.69e-53 171
Msa0974720 MtrunA17_Chr2g0318101 56.716 134 56 1 16 147 11 144 3.49e-53 172
Msa0974720 MtrunA17_Chr2g0326361 55.333 150 65 1 14 161 8 157 5.08e-53 171
Msa0974720 MtrunA17_Chr1g0183741 56.716 134 56 1 15 146 5 138 6.53e-53 169
Msa0974720 MtrunA17_Chr5g0398971 60.305 131 48 2 20 146 7 137 7.39e-53 171
Msa0974720 MtrunA17_Chr5g0433781 58.451 142 52 2 20 154 6 147 1.05e-52 177
Msa0974720 MtrunA17_Chr3g0130731 59.848 132 52 1 17 148 4 134 1.93e-52 168
Msa0974720 MtrunA17_Chr4g0047841 59.690 129 50 1 19 145 14 142 1.96e-52 170
Msa0974720 MtrunA17_Chr6g0481091 59.231 130 51 1 20 147 6 135 3.41e-52 166
Msa0974720 MtrunA17_Chr2g0309331 56.429 140 57 2 12 147 2 141 6.20e-52 168
Msa0974720 MtrunA17_Chr3g0109821 60.769 130 49 1 20 147 6 135 1.11e-51 174
Msa0974720 MtrunA17_Chr8g0346001 54.676 139 60 1 12 147 7 145 1.62e-51 169
Msa0974720 MtrunA17_Chr7g0261411 58.140 129 52 1 20 146 10 138 2.03e-51 166
Msa0974720 MtrunA17_Chr1g0200561 52.740 146 66 1 2 144 1 146 1.59e-50 165
Msa0974720 MtrunA17_Chr7g0214071 54.610 141 59 3 12 150 7 144 1.14e-49 160
Msa0974720 MtrunA17_Chr3g0128151 62.992 127 45 1 20 144 22 148 6.96e-48 163
Msa0974720 MtrunA17_Chr5g0400461 56.204 137 51 2 20 147 6 142 3.28e-47 156
Msa0974720 MtrunA17_Chr6g0453131 57.812 128 53 1 19 145 14 141 4.25e-47 157
Msa0974720 MtrunA17_Chr5g0428991 60.156 128 49 1 19 144 24 151 5.42e-47 161
Msa0974720 MtrunA17_Chr8g0361731 51.389 144 68 1 22 163 16 159 1.51e-46 155
Msa0974720 MtrunA17_Chr5g0417001 58.730 126 50 1 22 145 16 141 2.01e-46 155
Msa0974720 MtrunA17_Chr4g0054791 52.857 140 61 2 16 150 2 141 2.42e-45 150
Msa0974720 MtrunA17_Chr3g0128111 58.065 124 50 1 23 144 45 168 3.21e-45 148
Msa0974720 MtrunA17_Chr1g0201021 53.906 128 57 1 22 147 21 148 2.39e-44 153
Msa0974720 MtrunA17_Chr3g0113001 71.875 96 26 1 65 159 10 105 6.85e-44 146
Msa0974720 MtrunA17_Chr3g0130101 53.125 128 58 1 22 147 9 136 9.50e-44 147
Msa0974720 MtrunA17_Chr4g0076731 57.600 125 52 1 22 145 56 180 1.04e-43 149
Msa0974720 MtrunA17_Chr1g0197351 56.349 126 53 1 20 143 42 167 1.97e-43 149
Msa0974720 MtrunA17_Chr8g0364791 51.908 131 61 1 19 147 5 135 6.49e-43 147
Msa0974720 MtrunA17_Chr5g0442771 55.118 127 54 1 22 145 20 146 8.11e-43 144
Msa0974720 MtrunA17_Chr2g0311651 52.143 140 59 4 12 145 15 152 3.65e-42 142
Msa0974720 MtrunA17_Chr4g0038751 51.128 133 62 1 22 151 17 149 6.07e-42 141
Msa0974720 MtrunA17_Chr1g0197361 52.713 129 58 2 22 147 10 138 1.91e-41 145
Msa0974720 MtrunA17_Chr2g0311661 53.077 130 54 3 22 145 23 151 5.27e-41 139
Msa0974720 MtrunA17_Chr8g0384201 50.382 131 63 1 19 147 5 135 7.20e-41 142
Msa0974720 MtrunA17_Chr3g0092671 54.264 129 56 2 22 147 7 135 7.42e-41 143
Msa0974720 MtrunA17_Chr8g0345671 52.273 132 57 4 18 144 9 139 3.05e-38 134
Msa0974720 MtrunA17_Chr8g0385991 44.604 139 73 2 20 156 14 150 7.37e-38 129
Msa0974720 MtrunA17_Chr3g0131911 48.855 131 61 2 19 145 13 141 1.77e-37 128
Msa0974720 MtrunA17_Chr8g0345691 50.000 130 59 4 20 144 12 140 2.18e-35 127
Msa0974720 MtrunA17_Chr3g0113031 71.250 80 22 1 81 159 1 80 2.84e-34 121
Msa0974720 MtrunA17_Chr8g0345711 47.368 133 58 5 20 144 12 140 4.53e-32 112
Msa0974720 MtrunA17_Chr4g0026141 45.455 132 64 4 20 144 5 135 6.50e-32 114
Msa0974720 MtrunA17_Chr2g0321741 53.061 98 45 1 51 147 23 120 7.12e-32 116
Msa0974720 MtrunA17_Chr8g0345701 44.444 144 58 6 20 144 7 147 1.04e-30 109
Msa0974720 MtrunA17_Chr8g0345731 45.985 137 67 5 20 149 24 160 1.07e-30 109
Msa0974720 MtrunA17_Chr2g0321631 42.105 152 79 4 21 163 5 156 1.40e-30 111
Msa0974720 MtrunA17_Chr7g0266701 42.424 132 69 4 20 144 4 135 4.48e-27 102
Msa0974720 MtrunA17_Chr4g0050701 40.625 128 66 2 20 145 11 130 6.17e-27 100
Msa0974720 MtrunA17_Chr8g0345721 36.747 166 67 5 23 151 38 202 8.27e-27 100
Msa0974720 MtrunA17_Chr7g0243371 51.250 80 37 1 73 150 17 96 2.96e-24 91.3
Msa0974720 MtrunA17_Chr3g0113011 60.870 69 27 0 2 70 1 69 4.37e-24 89.4
Msa0974720 MtrunA17_Chr8g0345741 42.623 122 58 5 31 144 2 119 4.71e-24 91.7
Msa0974720 MtrunA17_Chr3g0113041 60.000 65 26 0 2 66 1 65 7.69e-22 83.6
Msa0974720 MtrunA17_Chr8g0384351 39.259 135 66 4 14 148 4 122 2.92e-21 85.5
Msa0974720 MtrunA17_Chr7g0251661 32.374 139 88 4 14 149 4 139 1.44e-19 80.1
Msa0974720 MtrunA17_Chr7g0251651 32.867 143 90 5 4 143 2 141 1.75e-18 78.2
Msa0974720 MtrunA17_Chr7g0251671 32.394 142 86 5 11 149 5 139 1.28e-16 72.8
Msa0974720 MtrunA17_Chr3g0130321 36.496 137 75 5 16 148 3 131 9.80e-16 71.2
Msa0974720 MtrunA17_Chr4g0046431 34.965 143 74 5 20 145 68 208 2.13e-15 72.0
Msa0974720 MtrunA17_Chr2g0282871 34.266 143 75 5 20 145 53 193 2.49e-15 71.6
Msa0974720 MtrunA17_Chr8g0367761 34.965 143 74 5 20 145 68 208 3.65e-15 70.5
Msa0974720 MtrunA17_Chr4g0040541 33.566 143 77 4 20 145 48 189 2.04e-14 68.9
Msa0974720 MtrunA17_Chr2g0324961 35.862 145 70 6 20 145 49 189 3.85e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0974720 AT3G29035.1 78.912 147 31 0 12 158 16 162 1.61e-86 256
Msa0974720 AT5G61430.1 79.167 144 30 0 15 158 11 154 2.20e-84 251
Msa0974720 AT5G39610.1 77.551 147 33 0 12 158 12 158 5.12e-84 249
Msa0974720 AT5G07680.1 76.027 146 35 0 13 158 10 155 7.78e-82 244
Msa0974720 AT5G18270.1 75.168 149 36 1 11 158 12 160 1.28e-79 239
Msa0974720 AT5G07680.2 77.143 140 32 0 19 158 2 141 1.50e-79 238
Msa0974720 AT5G18270.2 74.497 149 37 1 11 158 12 160 2.77e-79 238
Msa0974720 AT3G04060.1 75.694 144 34 1 16 158 16 159 1.99e-76 231
Msa0974720 AT3G18400.1 79.528 127 26 0 20 146 5 131 9.39e-75 226
Msa0974720 AT5G53950.1 73.427 143 36 1 20 160 17 159 2.15e-74 227
Msa0974720 AT3G15170.1 70.213 141 40 1 20 158 20 160 4.08e-69 212
Msa0974720 AT1G76420.1 62.500 160 56 2 1 156 1 160 7.97e-68 209
Msa0974720 AT2G24430.2 64.189 148 51 1 5 150 1 148 1.59e-66 205
Msa0974720 AT2G24430.1 64.189 148 51 1 5 150 1 148 1.59e-66 205
Msa0974720 AT3G12977.1 57.241 145 61 1 2 146 1 144 1.67e-59 186
Msa0974720 AT1G56010.2 60.870 138 53 1 19 155 18 155 1.55e-58 185
Msa0974720 AT3G04070.2 55.629 151 58 2 12 155 2 150 2.53e-56 180
Msa0974720 AT3G04070.1 55.629 151 58 2 12 155 2 150 4.10e-56 180
Msa0974720 AT1G01720.1 62.406 133 49 1 16 148 3 134 1.23e-55 177
Msa0974720 AT1G33280.1 62.879 132 46 1 20 148 8 139 7.41e-55 175
Msa0974720 AT4G10350.1 62.879 132 46 1 20 148 9 140 1.99e-54 175
Msa0974720 AT4G27410.2 61.240 129 50 0 17 145 11 139 2.84e-54 173
Msa0974720 AT1G77450.1 59.854 137 54 1 12 148 2 137 5.29e-54 171
Msa0974720 AT3G17730.1 60.769 130 49 1 20 147 6 135 1.53e-53 170
Msa0974720 AT4G36160.1 58.519 135 53 1 15 146 5 139 2.21e-53 173
Msa0974720 AT4G36160.3 58.519 135 53 1 15 146 5 139 2.21e-53 173
Msa0974720 AT4G36160.2 58.519 135 53 1 15 146 9 143 2.57e-53 173
Msa0974720 AT5G62380.2 60.000 130 49 1 20 146 7 136 2.85e-53 172
Msa0974720 AT5G62380.1 60.000 130 49 1 20 146 7 136 2.85e-53 172
Msa0974720 AT5G66300.1 55.172 145 57 2 12 153 4 143 6.17e-53 170
Msa0974720 AT1G12260.2 60.769 130 48 1 20 146 7 136 7.53e-53 171
Msa0974720 AT2G18060.3 56.522 138 57 1 12 146 1 138 1.04e-52 171
Msa0974720 AT2G18060.1 56.522 138 57 1 12 146 1 138 1.04e-52 171
Msa0974720 AT1G69490.1 54.225 142 65 0 20 161 9 150 1.20e-52 168
Msa0974720 AT1G12260.1 60.769 130 48 1 20 146 7 136 1.43e-52 172
Msa0974720 AT2G46770.1 53.425 146 65 1 5 147 1 146 2.55e-52 170
Msa0974720 AT5G08790.1 59.420 138 55 1 20 157 7 143 2.73e-52 168
Msa0974720 AT1G61110.1 59.231 130 52 1 19 147 15 144 3.50e-52 169
Msa0974720 AT3G15500.1 60.465 129 51 0 17 145 11 139 4.52e-52 168
Msa0974720 AT1G71930.2 56.061 132 55 1 20 148 9 140 5.35e-52 168
Msa0974720 AT1G71930.1 56.061 132 55 1 20 148 9 140 5.35e-52 168
Msa0974720 AT3G10490.1 61.719 128 47 1 20 145 27 154 5.49e-52 166
Msa0974720 AT3G61910.1 48.701 154 76 1 11 161 2 155 5.74e-52 169
Msa0974720 AT3G03200.1 62.595 131 47 1 20 148 6 136 5.91e-52 172
Msa0974720 AT1G62700.1 58.647 133 52 1 19 148 6 138 6.95e-52 170
Msa0974720 AT1G62700.2 58.647 133 52 1 19 148 6 138 6.95e-52 170
Msa0974720 AT2G33480.1 55.556 144 60 2 5 148 1 140 9.19e-52 166
Msa0974720 AT1G33060.1 61.538 130 48 1 20 147 24 153 1.02e-51 174
Msa0974720 AT1G33060.2 61.538 130 48 1 20 147 24 153 1.04e-51 174
Msa0974720 AT2G33480.2 55.556 144 60 2 5 148 1 140 1.07e-51 166
Msa0974720 AT1G52890.1 60.465 129 51 0 17 145 11 139 2.21e-51 167
Msa0974720 AT5G17260.1 61.069 131 49 1 20 148 6 136 3.87e-51 170
Msa0974720 AT1G65910.1 53.947 152 57 2 20 158 6 157 4.51e-51 172
Msa0974720 AT1G32770.1 53.741 147 65 1 5 148 1 147 6.92e-51 166
Msa0974720 AT4G35580.1 62.205 127 46 1 20 144 9 135 9.75e-51 169
Msa0974720 AT3G10490.2 61.719 128 47 1 20 145 27 154 1.12e-50 168
Msa0974720 AT4G35580.3 62.205 127 46 1 20 144 9 135 1.14e-50 170
Msa0974720 AT4G35580.2 62.205 127 46 1 20 144 9 135 1.16e-50 170
Msa0974720 AT5G61430.2 82.222 90 16 0 69 158 2 91 1.94e-50 163
Msa0974720 AT3G10480.1 61.719 128 47 1 20 145 27 154 2.01e-50 167
Msa0974720 AT3G10480.2 61.719 128 47 1 20 145 27 154 2.32e-50 167
Msa0974720 AT5G63790.1 59.848 132 52 1 17 148 47 177 4.89e-50 163
Msa0974720 AT5G63790.2 59.848 132 52 1 17 148 57 187 5.13e-50 163
Msa0974720 AT5G04410.1 60.000 130 50 1 20 147 9 138 6.86e-50 168
Msa0974720 AT4G27410.3 54.110 146 50 1 17 145 11 156 7.51e-50 162
Msa0974720 AT1G54330.1 54.605 152 59 2 20 161 6 157 8.74e-50 162
Msa0974720 AT5G39820.1 56.463 147 59 3 1 145 4 147 1.21e-49 162
Msa0974720 AT3G10500.1 59.231 130 51 1 20 147 9 138 1.34e-49 167
Msa0974720 AT1G79580.3 53.793 145 63 2 8 148 5 149 1.38e-49 163
Msa0974720 AT1G79580.5 53.793 145 63 2 8 148 5 149 1.38e-49 163
Msa0974720 AT1G79580.4 53.793 145 63 2 8 148 5 149 1.38e-49 163
Msa0974720 AT1G79580.2 53.793 145 63 2 8 148 5 149 1.38e-49 163
Msa0974720 AT1G79580.1 53.793 145 63 2 8 148 5 149 1.38e-49 163
Msa0974720 AT5G46590.2 54.483 145 63 2 20 161 6 150 1.46e-49 161
Msa0974720 AT5G46590.1 57.353 136 55 2 20 152 6 141 2.69e-49 160
Msa0974720 AT4G28530.1 54.110 146 49 2 19 146 9 154 2.78e-49 162
Msa0974720 AT1G26870.1 56.835 139 56 2 10 144 4 142 2.95e-48 161
Msa0974720 AT2G43000.1 50.000 152 75 1 13 163 10 161 4.91e-48 157
Msa0974720 AT5G13180.1 56.923 130 51 3 18 145 12 138 1.10e-47 155
Msa0974720 AT3G15510.1 56.452 124 52 1 24 145 21 144 2.69e-47 157
Msa0974720 AT4G17980.1 56.818 132 53 2 20 147 6 137 3.36e-47 154
Msa0974720 AT4G17980.2 56.818 132 53 2 20 147 6 137 8.42e-47 154
Msa0974720 AT2G02450.1 58.400 125 51 1 22 145 53 177 1.25e-44 150
Msa0974720 AT3G12910.1 53.147 143 60 4 8 145 10 150 1.81e-44 148
Msa0974720 AT2G02450.2 58.400 125 51 1 22 145 53 177 1.91e-44 151
Msa0974720 AT3G10480.3 49.068 161 47 1 20 145 27 187 2.88e-44 152
Msa0974720 AT1G34180.3 52.344 128 59 1 22 147 18 145 3.06e-44 151
Msa0974720 AT1G34180.1 52.344 128 59 1 22 147 18 145 1.00e-43 152
Msa0974720 AT2G17040.1 51.880 133 61 1 22 151 8 140 1.42e-43 145
Msa0974720 AT1G52880.1 54.688 128 54 1 24 147 21 148 2.05e-43 146
Msa0974720 AT5G64060.1 48.872 133 66 1 17 147 3 135 2.31e-43 147
Msa0974720 AT5G24590.2 54.930 142 56 3 20 153 13 154 3.41e-43 149
Msa0974720 AT3G49530.2 55.072 138 58 3 20 153 13 150 4.61e-43 147
Msa0974720 AT5G09330.5 50.376 133 64 1 17 147 3 135 8.20e-43 148
Msa0974720 AT5G09330.2 50.376 133 64 1 17 147 3 135 8.20e-43 148
Msa0974720 AT5G09330.4 50.376 133 64 1 17 147 3 135 8.20e-43 148
Msa0974720 AT5G09330.3 50.376 133 64 1 17 147 3 135 8.20e-43 148
Msa0974720 AT5G09330.1 50.376 133 64 1 17 147 3 135 8.20e-43 148
Msa0974720 AT2G27300.1 51.200 125 60 1 20 143 14 138 8.32e-43 145
Msa0974720 AT3G49530.1 55.072 138 58 3 20 153 13 150 8.83e-43 148
Msa0974720 AT1G34190.1 50.781 128 61 1 22 147 18 145 1.01e-42 149
Msa0974720 AT1G34180.4 47.857 140 59 1 22 147 18 157 4.12e-42 146
Msa0974720 AT1G34180.2 47.857 140 59 1 22 147 18 157 1.55e-41 146
Msa0974720 AT1G32510.1 50.704 142 61 2 20 152 6 147 5.16e-41 139
Msa0974720 AT1G32870.2 53.731 134 58 2 14 145 4 135 1.36e-39 140
Msa0974720 AT1G32870.1 53.731 134 58 2 14 145 4 135 1.45e-39 140
Msa0974720 AT1G32870.3 53.731 134 58 2 14 145 40 171 1.89e-39 140
Msa0974720 AT5G22290.1 49.593 123 61 1 22 143 23 145 2.31e-39 136
Msa0974720 AT3G44290.2 49.593 123 61 1 22 143 16 138 1.96e-38 131
Msa0974720 AT5G04395.1 46.853 143 60 2 19 145 27 169 4.50e-38 129
Msa0974720 AT3G44290.1 49.593 123 61 1 22 143 16 138 1.22e-37 132
Msa0974720 AT1G56010.1 65.517 87 30 0 69 155 2 88 4.57e-37 128
Msa0974720 AT3G12977.2 69.231 78 24 0 69 146 14 91 2.78e-36 125
Msa0974720 AT4G10350.2 69.737 76 23 0 73 148 18 93 2.38e-33 119
Msa0974720 AT4G28530.2 48.837 129 48 2 19 129 9 137 1.37e-32 118
Msa0974720 AT2G33480.3 63.158 76 28 0 73 148 8 83 4.03e-31 112
Msa0974720 AT4G01550.1 44.961 129 65 3 23 145 7 135 8.11e-28 107
Msa0974720 AT3G44350.1 40.278 144 80 3 19 156 4 147 1.00e-27 101
Msa0974720 AT3G44350.2 39.073 151 86 3 19 163 4 154 1.85e-27 103
Msa0974720 AT4G01520.1 40.152 132 72 4 21 145 5 136 4.93e-27 103
Msa0974720 AT5G22380.1 38.562 153 86 5 19 163 4 156 6.79e-27 101
Msa0974720 AT1G02230.1 43.077 130 64 5 21 143 4 130 2.35e-26 102
Msa0974720 AT5G64530.2 40.769 130 63 3 20 147 3 120 2.67e-26 97.8
Msa0974720 AT4G01540.2 41.538 130 69 4 23 145 7 136 4.01e-26 102
Msa0974720 AT4G01540.4 42.748 131 66 5 23 145 7 136 4.29e-26 102
Msa0974720 AT4G01540.1 41.538 130 69 4 23 145 7 136 5.41e-26 102
Msa0974720 AT4G01540.3 42.748 131 66 5 23 145 7 136 6.95e-26 102
Msa0974720 AT5G64530.1 40.769 130 63 3 20 147 3 120 8.56e-26 97.4
Msa0974720 AT3G04420.2 39.231 130 75 2 18 143 1 130 4.09e-25 98.2
Msa0974720 AT3G04420.1 39.231 130 75 2 18 143 1 130 7.48e-25 98.2
Msa0974720 AT3G10490.4 75.472 53 13 0 93 145 2 54 6.61e-23 93.2
Msa0974720 AT3G10490.3 75.472 53 13 0 93 145 2 54 6.61e-23 93.2
Msa0974720 AT1G02250.1 40.000 140 72 5 21 153 4 138 2.06e-22 92.0
Msa0974720 AT1G02220.1 37.692 130 74 3 18 143 1 127 5.84e-21 88.2
Msa0974720 AT1G01010.1 35.507 138 71 5 23 146 6 139 1.08e-20 87.8
Msa0974720 AT2G43000.2 46.988 83 44 0 81 163 1 83 3.21e-20 83.2
Msa0974720 AT2G18060.2 69.388 49 15 0 98 146 2 50 1.31e-19 83.2
Msa0974720 AT5G14000.2 35.659 129 79 2 19 145 14 140 9.49e-19 78.6
Msa0974720 AT5G14000.1 35.659 129 79 2 19 145 14 140 3.50e-18 78.2
Msa0974720 AT5G50820.1 37.226 137 60 7 20 145 17 138 7.75e-18 77.0
Msa0974720 AT3G56530.1 31.159 138 92 2 14 148 46 183 2.85e-17 77.4
Msa0974720 AT1G28470.1 36.364 143 72 6 20 145 77 217 4.47e-15 71.2
Msa0974720 AT5G22290.2 62.222 45 17 0 99 143 2 46 5.79e-15 70.1
Msa0974720 AT5G14490.1 32.168 143 79 4 20 145 58 199 3.32e-13 66.2
Msa0974720 AT5G14490.4 32.168 143 79 4 20 145 55 196 3.39e-13 66.2
Msa0974720 AT5G14490.2 32.168 143 79 4 20 145 55 196 3.56e-13 65.9
Msa0974720 AT5G14490.3 32.168 143 79 4 20 145 58 199 4.10e-13 66.2
Msa0974720 AT3G55210.1 29.655 145 88 3 18 148 9 153 6.98e-13 65.1
Msa0974720 AT3G04430.1 32.061 131 77 3 26 144 6 136 9.44e-13 63.5
Msa0974720 AT5G56620.2 32.680 153 75 4 20 145 43 194 1.51e-12 64.7
Msa0974720 AT5G56620.3 32.680 153 75 4 20 145 43 194 1.58e-12 64.7
Msa0974720 AT5G56620.1 32.680 153 75 4 20 145 43 194 1.99e-12 64.3
Msa0974720 AT4G28500.1 34.722 144 74 5 20 145 59 200 2.37e-12 63.5
Msa0974720 AT3G01600.1 31.944 144 78 5 20 145 55 196 9.92e-12 62.4
Msa0974720 AT1G25580.1 30.935 139 79 4 20 145 58 192 2.55e-11 61.2

Find 28 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATTGCCACCTGGATTT+AGG 0.205368 6_4:+7991566 Msa0974720:CDS
AAAACTCACCATAGCTCTTT+TGG 0.230831 6_4:-7992247 None:intergenic
CAACAGGTCTAAGGACAAAT+AGG 0.280592 6_4:+7992043 Msa0974720:CDS
TATAGAGAGAAGATACTAAT+TGG 0.287773 6_4:+7992114 Msa0974720:CDS
TTGTGTAGGGAGGGCCAATA+TGG 0.306694 6_4:+7991975 Msa0974720:intron
GAAAATATCCAACAGGTCTA+AGG 0.349499 6_4:+7992034 Msa0974720:CDS
GGGCCACAAGTACTGGATAT+TGG 0.387983 6_4:+7992064 Msa0974720:CDS
CTATTTGTCCTTAGACCTGT+TGG 0.388363 6_4:-7992042 None:intergenic
AAGAATATGTGTCTTCTAAT+CGG 0.395078 6_4:-7992212 None:intergenic
ACAAATAGGGCCACAAGTAC+TGG 0.399331 6_4:+7992057 Msa0974720:CDS
ACTGGATATTGGAAGGCAAC+AGG 0.460719 6_4:+7992075 Msa0974720:CDS
AACAGGTCTAAGGACAAATA+GGG 0.472940 6_4:+7992044 Msa0974720:CDS
TTTGAACAAGTGTGAACCTT+GGG 0.484109 6_4:+7991681 Msa0974720:CDS
GAGGGCCAATATGGGTGAAA+AGG 0.519049 6_4:+7991984 Msa0974720:CDS
AGGGACAGAAAATATCCAAC+AGG 0.520947 6_4:+7992027 Msa0974720:CDS
GTTATGAGTTCTTCATCTGT+TGG 0.527445 6_4:-7991595 None:intergenic
ATTAATTATGATGGATGCAA+TGG 0.548436 6_4:+7991507 None:intergenic
CTTCCAATATCCAGTACTTG+TGG 0.549015 6_4:-7992067 None:intergenic
TACAAAGGAAGAGCTCCTAA+AGG 0.554352 6_4:+7992159 Msa0974720:CDS
TGTGTAGGGAGGGCCAATAT+GGG 0.558995 6_4:+7991976 Msa0974720:intron
GTTGGATGAAACCTAAATCC+AGG 0.563929 6_4:-7991577 None:intergenic
AAATGTATCCAAAAGAGCTA+TGG 0.569420 6_4:+7992239 Msa0974720:CDS
GTTCAAATCAGCTTCACCAA+TGG 0.595043 6_4:-7991665 None:intergenic
CACAAGTACTGGATATTGGA+AGG 0.597121 6_4:+7992068 Msa0974720:CDS
ATTTGAACAAGTGTGAACCT+TGG 0.620030 6_4:+7991680 Msa0974720:CDS
TACTTACAAGGCAAATCCCA+AGG 0.621454 6_4:-7991697 None:intergenic
CCAATATGGGTGAAAAGGAG+TGG 0.638048 6_4:+7991989 Msa0974720:CDS
GGATGAAACCTAAATCCAGG+TGG 0.732405 6_4:-7991574 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAAAAAATATT+CGG - chr6_4:7992475-7992494 None:intergenic 0.0%
!! AAAAAATAAAAAAAAATATT+CGG - chr6_4:7992475-7992494 None:intergenic 0.0%
!!! TTTTTTAAGAGAAAAAAAAA+TGG - chr6_4:7991745-7991764 None:intergenic 10.0%
!! TAAAATTAAATCCAAATTAT+AGG - chr6_4:7992553-7992572 None:intergenic 10.0%
!!! TTTTTTAAGAGAAAAAAAAA+TGG - chr6_4:7991745-7991764 None:intergenic 10.0%
!! TAAAATTAAATCCAAATTAT+AGG - chr6_4:7992553-7992572 None:intergenic 10.0%
!!! TATTTTTTCTTAATTGTGTA+GGG + chr6_4:7991962-7991981 Msa0974720:intron 15.0%
!!! AAATATTATCATAACCATTT+TGG - chr6_4:7992514-7992533 None:intergenic 15.0%
!!! TATTTTTTCTTAATTGTGTA+GGG + chr6_4:7991962-7991981 Msa0974720:intron 15.0%
!!! AAATATTATCATAACCATTT+TGG - chr6_4:7992514-7992533 None:intergenic 15.0%
!! AGAAAAAAAAATGGAATCAA+TGG - chr6_4:7991736-7991755 None:intergenic 20.0%
!!! TTAGTATCGAGTTTTTAAAT+CGG + chr6_4:7991767-7991786 Msa0974720:intron 20.0%
!!! CTATTTTTTCTTAATTGTGT+AGG + chr6_4:7991961-7991980 Msa0974720:intron 20.0%
!! TAAAGGTGAAAAAACAAATT+GGG + chr6_4:7992176-7992195 Msa0974720:CDS 20.0%
!!! TTTTATATTATGGTAACATG+TGG + chr6_4:7992351-7992370 Msa0974720:intron 20.0%
!! TTTGCAAAATATATCCAAAA+TGG + chr6_4:7992497-7992516 Msa0974720:intron 20.0%
!!! CTATACTTTTACCTATAATT+TGG + chr6_4:7992539-7992558 Msa0974720:intron 20.0%
!!! TTAATGTTTTCTTTTTCAGA+AGG + chr6_4:7992570-7992589 Msa0974720:intron 20.0%
!! AGAAAAAAAAATGGAATCAA+TGG - chr6_4:7991736-7991755 None:intergenic 20.0%
!!! TTAGTATCGAGTTTTTAAAT+CGG + chr6_4:7991767-7991786 Msa0974720:intron 20.0%
!!! CTATTTTTTCTTAATTGTGT+AGG + chr6_4:7991961-7991980 Msa0974720:intron 20.0%
!! TAAAGGTGAAAAAACAAATT+GGG + chr6_4:7992176-7992195 Msa0974720:CDS 20.0%
!!! TTTTATATTATGGTAACATG+TGG + chr6_4:7992351-7992370 Msa0974720:intron 20.0%
!! TTTGCAAAATATATCCAAAA+TGG + chr6_4:7992497-7992516 Msa0974720:intron 20.0%
!!! CTATACTTTTACCTATAATT+TGG + chr6_4:7992539-7992558 Msa0974720:intron 20.0%
!!! TTAATGTTTTCTTTTTCAGA+AGG + chr6_4:7992570-7992589 Msa0974720:intron 20.0%
!!! TATTAAGAACTTTTTGAGAG+AGG - chr6_4:7991627-7991646 None:intergenic 25.0%
! AATGAGAAGAAATACTTACA+AGG - chr6_4:7991712-7991731 None:intergenic 25.0%
! TATAGAGAGAAGATACTAAT+TGG + chr6_4:7992114-7992133 Msa0974720:CDS 25.0%
!!! AAAACACTTGTTTTCTACAA+AGG + chr6_4:7992144-7992163 Msa0974720:CDS 25.0%
!!! CAATTTGTTTTTTCACCTTT+AGG - chr6_4:7992177-7992196 None:intergenic 25.0%
! CTAAAGGTGAAAAAACAAAT+TGG + chr6_4:7992175-7992194 Msa0974720:CDS 25.0%
! AAGAATATGTGTCTTCTAAT+CGG - chr6_4:7992215-7992234 None:intergenic 25.0%
!! CTATAATGGAAAGATTATAG+AGG - chr6_4:7992275-7992294 None:intergenic 25.0%
! AATCTTTCCATTATAGTACT+AGG + chr6_4:7992279-7992298 Msa0974720:intron 25.0%
!! CACTGCAAACTTTTATATTA+TGG + chr6_4:7992341-7992360 Msa0974720:intron 25.0%
! GAAAATGCATATTCAAGATT+TGG + chr6_4:7992636-7992655 Msa0974720:intron 25.0%
! GAATATGAAGATGTTAACAT+AGG - chr6_4:7992832-7992851 None:intergenic 25.0%
! GGGAAATATTATCATAAGAA+GGG - chr6_4:7992861-7992880 None:intergenic 25.0%
! ATAATATTTCCCCTATTTCA+TGG + chr6_4:7992869-7992888 Msa0974720:intron 25.0%
! GAATATTCATCAGATATAGT+AGG + chr6_4:7993006-7993025 Msa0974720:intron 25.0%
! TTCATCTTCAATAATTCCAT+AGG - chr6_4:7993050-7993069 None:intergenic 25.0%
! TATGGAATTATTGAAGATGA+AGG + chr6_4:7993049-7993068 Msa0974720:intron 25.0%
!!! TATTAAGAACTTTTTGAGAG+AGG - chr6_4:7991627-7991646 None:intergenic 25.0%
! AATGAGAAGAAATACTTACA+AGG - chr6_4:7991712-7991731 None:intergenic 25.0%
! TATAGAGAGAAGATACTAAT+TGG + chr6_4:7992114-7992133 Msa0974720:CDS 25.0%
!!! AAAACACTTGTTTTCTACAA+AGG + chr6_4:7992144-7992163 Msa0974720:CDS 25.0%
!!! CAATTTGTTTTTTCACCTTT+AGG - chr6_4:7992177-7992196 None:intergenic 25.0%
! CTAAAGGTGAAAAAACAAAT+TGG + chr6_4:7992175-7992194 Msa0974720:CDS 25.0%
! AAGAATATGTGTCTTCTAAT+CGG - chr6_4:7992215-7992234 None:intergenic 25.0%
!! CTATAATGGAAAGATTATAG+AGG - chr6_4:7992275-7992294 None:intergenic 25.0%
! AATCTTTCCATTATAGTACT+AGG + chr6_4:7992279-7992298 Msa0974720:intron 25.0%
!! CACTGCAAACTTTTATATTA+TGG + chr6_4:7992341-7992360 Msa0974720:intron 25.0%
! GAAAATGCATATTCAAGATT+TGG + chr6_4:7992636-7992655 Msa0974720:intron 25.0%
! GAATATGAAGATGTTAACAT+AGG - chr6_4:7992832-7992851 None:intergenic 25.0%
! GGGAAATATTATCATAAGAA+GGG - chr6_4:7992861-7992880 None:intergenic 25.0%
! ATAATATTTCCCCTATTTCA+TGG + chr6_4:7992869-7992888 Msa0974720:intron 25.0%
! GAATATTCATCAGATATAGT+AGG + chr6_4:7993006-7993025 Msa0974720:intron 25.0%
! TTCATCTTCAATAATTCCAT+AGG - chr6_4:7993050-7993069 None:intergenic 25.0%
! TATGGAATTATTGAAGATGA+AGG + chr6_4:7993049-7993068 Msa0974720:intron 25.0%
! TTTTTCTTAATTGTGTAGGG+AGG + chr6_4:7991965-7991984 Msa0974720:intron 30.0%
! TTTTCTTAATTGTGTAGGGA+GGG + chr6_4:7991966-7991985 Msa0974720:intron 30.0%
AAATGTATCCAAAAGAGCTA+TGG + chr6_4:7992239-7992258 Msa0974720:CDS 30.0%
AACTTCACCTAGTACTATAA+TGG - chr6_4:7992289-7992308 None:intergenic 30.0%
!! GTTTTTGAGAAAAGTTCTTG+TGG + chr6_4:7992610-7992629 Msa0974720:intron 30.0%
! TGCATATTCAAGATTTGGTA+AGG + chr6_4:7992641-7992660 Msa0974720:intron 30.0%
TTGGTAAGGTTCAATTCAAT+TGG + chr6_4:7992655-7992674 Msa0974720:intron 30.0%
!! GCTTTTGTTTCACTATTGTA+TGG - chr6_4:7992715-7992734 None:intergenic 30.0%
TTGTCTTGTGTACTTTGATT+TGG - chr6_4:7992778-7992797 None:intergenic 30.0%
GGGGAAATATTATCATAAGA+AGG - chr6_4:7992862-7992881 None:intergenic 30.0%
AGATGAAATGTCAACATCAA+AGG - chr6_4:7992941-7992960 None:intergenic 30.0%
TCAAAGTTCATATGTGAATG+AGG + chr6_4:7992984-7993003 Msa0974720:intron 30.0%
GAATTATTGAAGATGAAGGT+TGG + chr6_4:7993053-7993072 Msa0974720:intron 30.0%
! TTTTTCTTAATTGTGTAGGG+AGG + chr6_4:7991965-7991984 Msa0974720:intron 30.0%
! TTTTCTTAATTGTGTAGGGA+GGG + chr6_4:7991966-7991985 Msa0974720:intron 30.0%
AAATGTATCCAAAAGAGCTA+TGG + chr6_4:7992239-7992258 Msa0974720:CDS 30.0%
AACTTCACCTAGTACTATAA+TGG - chr6_4:7992289-7992308 None:intergenic 30.0%
!! GTTTTTGAGAAAAGTTCTTG+TGG + chr6_4:7992610-7992629 Msa0974720:intron 30.0%
! TGCATATTCAAGATTTGGTA+AGG + chr6_4:7992641-7992660 Msa0974720:intron 30.0%
TTGGTAAGGTTCAATTCAAT+TGG + chr6_4:7992655-7992674 Msa0974720:intron 30.0%
!! GCTTTTGTTTCACTATTGTA+TGG - chr6_4:7992715-7992734 None:intergenic 30.0%
TTGTCTTGTGTACTTTGATT+TGG - chr6_4:7992778-7992797 None:intergenic 30.0%
GGGGAAATATTATCATAAGA+AGG - chr6_4:7992862-7992881 None:intergenic 30.0%
AGATGAAATGTCAACATCAA+AGG - chr6_4:7992941-7992960 None:intergenic 30.0%
TCAAAGTTCATATGTGAATG+AGG + chr6_4:7992984-7993003 Msa0974720:intron 30.0%
GAATTATTGAAGATGAAGGT+TGG + chr6_4:7993053-7993072 Msa0974720:intron 30.0%
GAAAAATTTGAATTGCCACC+TGG + chr6_4:7991559-7991578 Msa0974720:CDS 35.0%
GTTATGAGTTCTTCATCTGT+TGG - chr6_4:7991598-7991617 None:intergenic 35.0%
! TCTTTTTGTGCTATAGCCAT+TGG + chr6_4:7991649-7991668 Msa0974720:CDS 35.0%
ATTTGAACAAGTGTGAACCT+TGG + chr6_4:7991680-7991699 Msa0974720:CDS 35.0%
TTTGAACAAGTGTGAACCTT+GGG + chr6_4:7991681-7991700 Msa0974720:CDS 35.0%
!!! AGTGGTATTTTTTCTGTGTG+AGG + chr6_4:7992007-7992026 Msa0974720:CDS 35.0%
!!! GTGGTATTTTTTCTGTGTGA+GGG + chr6_4:7992008-7992027 Msa0974720:CDS 35.0%
GAAAATATCCAACAGGTCTA+AGG + chr6_4:7992034-7992053 Msa0974720:CDS 35.0%
AACAGGTCTAAGGACAAATA+GGG + chr6_4:7992044-7992063 Msa0974720:CDS 35.0%
! AAAACTCACCATAGCTCTTT+TGG - chr6_4:7992250-7992269 None:intergenic 35.0%
ACTAGGTGAAGTTGAATGAT+CGG + chr6_4:7992296-7992315 Msa0974720:intron 35.0%
!!! TCGGTTTTAAATCGTGACTT+AGG + chr6_4:7992315-7992334 Msa0974720:intron 35.0%
!!! GTTTTCTTTTTCAGAAGGAG+TGG + chr6_4:7992575-7992594 Msa0974720:intron 35.0%
TATGGTGAAGAATCCATCAA+TGG - chr6_4:7992697-7992716 None:intergenic 35.0%
GACAATGACAACAACATAGT+TGG + chr6_4:7992793-7992812 Msa0974720:intron 35.0%
AATTTCCAACTTGTGTGGAT+TGG - chr6_4:7992912-7992931 None:intergenic 35.0%
TTGTGAATTTCCAACTTGTG+TGG - chr6_4:7992917-7992936 None:intergenic 35.0%
!! ATAGTAGGACATTTTGACAC+TGG + chr6_4:7993021-7993040 Msa0974720:intron 35.0%
GAAAAATTTGAATTGCCACC+TGG + chr6_4:7991559-7991578 Msa0974720:CDS 35.0%
GTTATGAGTTCTTCATCTGT+TGG - chr6_4:7991598-7991617 None:intergenic 35.0%
! TCTTTTTGTGCTATAGCCAT+TGG + chr6_4:7991649-7991668 Msa0974720:CDS 35.0%
ATTTGAACAAGTGTGAACCT+TGG + chr6_4:7991680-7991699 Msa0974720:CDS 35.0%
TTTGAACAAGTGTGAACCTT+GGG + chr6_4:7991681-7991700 Msa0974720:CDS 35.0%
!!! AGTGGTATTTTTTCTGTGTG+AGG + chr6_4:7992007-7992026 Msa0974720:CDS 35.0%
!!! GTGGTATTTTTTCTGTGTGA+GGG + chr6_4:7992008-7992027 Msa0974720:CDS 35.0%
GAAAATATCCAACAGGTCTA+AGG + chr6_4:7992034-7992053 Msa0974720:CDS 35.0%
AACAGGTCTAAGGACAAATA+GGG + chr6_4:7992044-7992063 Msa0974720:CDS 35.0%
! AAAACTCACCATAGCTCTTT+TGG - chr6_4:7992250-7992269 None:intergenic 35.0%
ACTAGGTGAAGTTGAATGAT+CGG + chr6_4:7992296-7992315 Msa0974720:intron 35.0%
!!! TCGGTTTTAAATCGTGACTT+AGG + chr6_4:7992315-7992334 Msa0974720:intron 35.0%
!!! GTTTTCTTTTTCAGAAGGAG+TGG + chr6_4:7992575-7992594 Msa0974720:intron 35.0%
TATGGTGAAGAATCCATCAA+TGG - chr6_4:7992697-7992716 None:intergenic 35.0%
GACAATGACAACAACATAGT+TGG + chr6_4:7992793-7992812 Msa0974720:intron 35.0%
AATTTCCAACTTGTGTGGAT+TGG - chr6_4:7992912-7992931 None:intergenic 35.0%
TTGTGAATTTCCAACTTGTG+TGG - chr6_4:7992917-7992936 None:intergenic 35.0%
!! ATAGTAGGACATTTTGACAC+TGG + chr6_4:7993021-7993040 Msa0974720:intron 35.0%
TTGAATTGCCACCTGGATTT+AGG + chr6_4:7991566-7991585 Msa0974720:CDS 40.0%
GTTGGATGAAACCTAAATCC+AGG - chr6_4:7991580-7991599 None:intergenic 40.0%
GTTCAAATCAGCTTCACCAA+TGG - chr6_4:7991668-7991687 None:intergenic 40.0%
TACTTACAAGGCAAATCCCA+AGG - chr6_4:7991700-7991719 None:intergenic 40.0%
AGGGACAGAAAATATCCAAC+AGG + chr6_4:7992027-7992046 Msa0974720:CDS 40.0%
CTATTTGTCCTTAGACCTGT+TGG - chr6_4:7992045-7992064 None:intergenic 40.0%
CAACAGGTCTAAGGACAAAT+AGG + chr6_4:7992043-7992062 Msa0974720:CDS 40.0%
CTTCCAATATCCAGTACTTG+TGG - chr6_4:7992070-7992089 None:intergenic 40.0%
!! CACAAGTACTGGATATTGGA+AGG + chr6_4:7992068-7992087 Msa0974720:CDS 40.0%
TACAAAGGAAGAGCTCCTAA+AGG + chr6_4:7992159-7992178 Msa0974720:CDS 40.0%
! GTGGTTGATGCAGTTGAAAT+TGG + chr6_4:7992370-7992389 Msa0974720:intron 40.0%
TGCAGTTGAAATTGGAGTTG+CGG + chr6_4:7992378-7992397 Msa0974720:intron 40.0%
AGAACTACTACCTCCATTGA+TGG + chr6_4:7992681-7992700 Msa0974720:intron 40.0%
AACTAGGGGTCCATGAAATA+GGG - chr6_4:7992882-7992901 None:intergenic 40.0%
AAACTAGGGGTCCATGAAAT+AGG - chr6_4:7992883-7992902 None:intergenic 40.0%
!! TGGATTGGTGTGACAAACTA+GGG - chr6_4:7992897-7992916 None:intergenic 40.0%
!! ATTTTGACACTGGTTGCCTA+TGG + chr6_4:7993031-7993050 Msa0974720:intron 40.0%
TTGAATTGCCACCTGGATTT+AGG + chr6_4:7991566-7991585 Msa0974720:CDS 40.0%
GTTGGATGAAACCTAAATCC+AGG - chr6_4:7991580-7991599 None:intergenic 40.0%
GTTCAAATCAGCTTCACCAA+TGG - chr6_4:7991668-7991687 None:intergenic 40.0%
TACTTACAAGGCAAATCCCA+AGG - chr6_4:7991700-7991719 None:intergenic 40.0%
AGGGACAGAAAATATCCAAC+AGG + chr6_4:7992027-7992046 Msa0974720:CDS 40.0%
CTATTTGTCCTTAGACCTGT+TGG - chr6_4:7992045-7992064 None:intergenic 40.0%
CAACAGGTCTAAGGACAAAT+AGG + chr6_4:7992043-7992062 Msa0974720:CDS 40.0%
CTTCCAATATCCAGTACTTG+TGG - chr6_4:7992070-7992089 None:intergenic 40.0%
!! CACAAGTACTGGATATTGGA+AGG + chr6_4:7992068-7992087 Msa0974720:CDS 40.0%
TACAAAGGAAGAGCTCCTAA+AGG + chr6_4:7992159-7992178 Msa0974720:CDS 40.0%
! GTGGTTGATGCAGTTGAAAT+TGG + chr6_4:7992370-7992389 Msa0974720:intron 40.0%
TGCAGTTGAAATTGGAGTTG+CGG + chr6_4:7992378-7992397 Msa0974720:intron 40.0%
AGAACTACTACCTCCATTGA+TGG + chr6_4:7992681-7992700 Msa0974720:intron 40.0%
AACTAGGGGTCCATGAAATA+GGG - chr6_4:7992882-7992901 None:intergenic 40.0%
AAACTAGGGGTCCATGAAAT+AGG - chr6_4:7992883-7992902 None:intergenic 40.0%
!! TGGATTGGTGTGACAAACTA+GGG - chr6_4:7992897-7992916 None:intergenic 40.0%
!! ATTTTGACACTGGTTGCCTA+TGG + chr6_4:7993031-7993050 Msa0974720:intron 40.0%
GGATGAAACCTAAATCCAGG+TGG - chr6_4:7991577-7991596 None:intergenic 45.0%
GGTATGCAATCGTGACATCA+AGG + chr6_4:7991788-7991807 Msa0974720:intron 45.0%
! CCACTCCTTTTCACCCATAT+TGG - chr6_4:7991992-7992011 None:intergenic 45.0%
CCAATATGGGTGAAAAGGAG+TGG + chr6_4:7991989-7992008 Msa0974720:CDS 45.0%
ACAAATAGGGCCACAAGTAC+TGG + chr6_4:7992057-7992076 Msa0974720:CDS 45.0%
ACTGGATATTGGAAGGCAAC+AGG + chr6_4:7992075-7992094 Msa0974720:CDS 45.0%
TGCTTCCGCACATGCAATTA+TGG + chr6_4:7992422-7992441 Msa0974720:intron 45.0%
CGCAACCATAATTGCATGTG+CGG - chr6_4:7992430-7992449 None:intergenic 45.0%
GGTGAAGAATCCATCAATGG+AGG - chr6_4:7992694-7992713 None:intergenic 45.0%
ACTAGGGGTCCATGAAATAG+GGG - chr6_4:7992881-7992900 None:intergenic 45.0%
! GGATTGGTGTGACAAACTAG+GGG - chr6_4:7992896-7992915 None:intergenic 45.0%
!! GTGGATTGGTGTGACAAACT+AGG - chr6_4:7992898-7992917 None:intergenic 45.0%
TCACACCAATCCACACAAGT+TGG + chr6_4:7992904-7992923 Msa0974720:intron 45.0%
GGATGAAACCTAAATCCAGG+TGG - chr6_4:7991577-7991596 None:intergenic 45.0%
GGTATGCAATCGTGACATCA+AGG + chr6_4:7991788-7991807 Msa0974720:intron 45.0%
! CCACTCCTTTTCACCCATAT+TGG - chr6_4:7991992-7992011 None:intergenic 45.0%
CCAATATGGGTGAAAAGGAG+TGG + chr6_4:7991989-7992008 Msa0974720:CDS 45.0%
ACAAATAGGGCCACAAGTAC+TGG + chr6_4:7992057-7992076 Msa0974720:CDS 45.0%
ACTGGATATTGGAAGGCAAC+AGG + chr6_4:7992075-7992094 Msa0974720:CDS 45.0%
TGCTTCCGCACATGCAATTA+TGG + chr6_4:7992422-7992441 Msa0974720:intron 45.0%
CGCAACCATAATTGCATGTG+CGG - chr6_4:7992430-7992449 None:intergenic 45.0%
GGTGAAGAATCCATCAATGG+AGG - chr6_4:7992694-7992713 None:intergenic 45.0%
ACTAGGGGTCCATGAAATAG+GGG - chr6_4:7992881-7992900 None:intergenic 45.0%
! GGATTGGTGTGACAAACTAG+GGG - chr6_4:7992896-7992915 None:intergenic 45.0%
!! GTGGATTGGTGTGACAAACT+AGG - chr6_4:7992898-7992917 None:intergenic 45.0%
TCACACCAATCCACACAAGT+TGG + chr6_4:7992904-7992923 Msa0974720:intron 45.0%
!! TATGATTAAAAAAAAAAATT+AGG + chr6_4:7993096-7993115 Msa0974720:intron 5.0%
!! TATGATTAAAAAAAAAAATT+AGG + chr6_4:7993096-7993115 Msa0974720:intron 5.0%
TTGTGTAGGGAGGGCCAATA+TGG + chr6_4:7991975-7991994 Msa0974720:intron 50.0%
TGTGTAGGGAGGGCCAATAT+GGG + chr6_4:7991976-7991995 Msa0974720:intron 50.0%
GAGGGCCAATATGGGTGAAA+AGG + chr6_4:7991984-7992003 Msa0974720:CDS 50.0%
!! GGGCCACAAGTACTGGATAT+TGG + chr6_4:7992064-7992083 Msa0974720:CDS 50.0%
TTGTGTAGGGAGGGCCAATA+TGG + chr6_4:7991975-7991994 Msa0974720:intron 50.0%
TGTGTAGGGAGGGCCAATAT+GGG + chr6_4:7991976-7991995 Msa0974720:intron 50.0%
GAGGGCCAATATGGGTGAAA+AGG + chr6_4:7991984-7992003 Msa0974720:CDS 50.0%
!! GGGCCACAAGTACTGGATAT+TGG + chr6_4:7992064-7992083 Msa0974720:CDS 50.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 7991514 7993132 7991514 ID=Msa0974720;Name=Msa0974720
chr6_4 mRNA 7991514 7993132 7991514 ID=Msa0974720-mRNA-1;Parent=Msa0974720;Name=Msa0974720-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.66|1|1|3|0|163
chr6_4 exon 7991514 7991712 7991514 ID=Msa0974720-mRNA-1:exon:3009;Parent=Msa0974720-mRNA-1
chr6_4 exon 7991983 7992260 7991983 ID=Msa0974720-mRNA-1:exon:3010;Parent=Msa0974720-mRNA-1
chr6_4 exon 7993118 7993132 7993118 ID=Msa0974720-mRNA-1:exon:3011;Parent=Msa0974720-mRNA-1
chr6_4 CDS 7991514 7991712 7991514 ID=Msa0974720-mRNA-1:cds;Parent=Msa0974720-mRNA-1
chr6_4 CDS 7991983 7992260 7991983 ID=Msa0974720-mRNA-1:cds;Parent=Msa0974720-mRNA-1
chr6_4 CDS 7993118 7993132 7993118 ID=Msa0974720-mRNA-1:cds;Parent=Msa0974720-mRNA-1
Gene Sequence

>Msa0974720

ATGATGGATGCAATGGAGAAAAATTCAAGAAATGTTGAGAGTGATGAAAAATTTGAATTGCCACCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTACCTCTCTCAAAAAGTTCTTAATAATTCTTTTTGTGCTATAGCCATTGGTGAAGCTGATTTGAACAAGTGTGAACCTTGGGATTTGCCTTGGAGGGCCAATATGGGTGAAAAGGAGTGGTATTTTTTCTGTGTGAGGGACAGAAAATATCCAACAGGTCTAAGGACAAATAGGGCCACAAGTACTGGATATTGGAAGGCAACAGGTAAAGACAAAGAGATATATAGAGAGAAGATACTAATTGGAATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCTAAAGGTGAAAAAACAAATTGGGTCATGCATGAATACCGATTAGAAGACACATATTCTTTGCAAAATGTATCCAAAAGAGCTATGGAGTTAACTTTATAA
Protein sequence

>Msa0974720

MMDAMEKNSRNVESDEKFELPPGFRFHPTDEELITHYLSQKVLNNSFCAIAIGEADLNKCEPWDLPWRANMGEKEWYFFCVRDRKYPTGLRTNRATSTGYWKATGKDKEIYREKILIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEDTYSLQNVSKRAMELTL*