AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0980960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980960 MtrunA17_Chr6g0485301 78.439 269 43 3 767 1020 212 480 1.30e-133 414
Msa0980960 MtrunA17_Chr4g0030281 86.937 222 27 1 130 349 1 222 4.81e-126 401
Msa0980960 MtrunA17_Chr8g0390631 71.004 269 63 3 767 1020 204 472 8.26e-121 380
Msa0980960 MtrunA17_Chr8g0390651 68.030 269 71 3 767 1020 213 481 7.07e-113 360
Msa0980960 MtrunA17_Chr6g0485311 66.543 269 75 3 767 1020 210 478 3.63e-104 336
Msa0980960 MtrunA17_Chr6g0469321 83.832 167 26 1 575 740 1 167 8.56e-82 263
Msa0980960 MtrunA17_Chr8g0365221 44.776 268 133 3 767 1019 251 518 3.26e-71 247
Msa0980960 MtrunA17_Chr3g0117861 47.584 269 126 3 767 1020 252 520 1.20e-70 246
Msa0980960 MtrunA17_Chr7g0262111 72.340 188 48 2 477 660 192 379 1.12e-69 242
Msa0980960 MtrunA17_Chr4g0059221 44.981 269 133 3 767 1020 254 522 5.14e-69 241
Msa0980960 MtrunA17_Chr3g0118121 37.546 269 150 5 768 1019 205 472 1.67e-46 175
Msa0980960 MtrunA17_Chr4g0059521 34.944 269 157 5 768 1019 205 472 7.32e-44 167
Msa0980960 MtrunA17_Chr3g0118081 35.688 269 155 5 768 1019 235 502 2.48e-43 166
Msa0980960 MtrunA17_Chr5g0394661 80.208 96 17 1 203 296 151 246 5.91e-41 162
Msa0980960 MtrunA17_Chr7g0249681 61.940 134 21 2 95 201 276 406 5.11e-39 158
Msa0980960 MtrunA17_Chr1g0154731 49.045 157 79 1 477 632 190 346 1.20e-37 149
Msa0980960 MtrunA17_Chr2g0310091 33.457 269 163 4 764 1017 247 514 3.66e-34 139
Msa0980960 MtrunA17_Chr1g0149841 68.224 107 34 0 622 728 186 292 3.62e-28 120
Msa0980960 MtrunA17_Chr2g0313821 36.364 198 112 6 476 660 190 386 1.05e-25 112
Msa0980960 MtrunA17_Chr4g0063221 35.542 166 95 3 477 632 195 358 2.56e-24 108
Msa0980960 MtrunA17_Chr2g0313801 37.126 167 95 4 476 632 190 356 6.71e-24 107
Msa0980960 MtrunA17_Chr2g0313781 37.725 167 94 5 476 632 202 368 1.42e-23 106
Msa0980960 MtrunA17_Chr6g0479891 86.441 59 8 0 1017 1075 295 353 1.53e-23 106
Msa0980960 MtrunA17_Chr2g0313811 37.126 167 95 5 476 632 202 368 1.79e-23 105
Msa0980960 MtrunA17_Chr2g0294411 29.225 284 176 9 757 1020 237 515 4.27e-23 105
Msa0980960 MtrunA17_Chr7g0235261 39.759 166 81 6 478 632 193 350 4.72e-23 104
Msa0980960 MtrunA17_Chr1g0193811 36.196 163 97 4 476 632 195 356 5.88e-23 104
Msa0980960 MtrunA17_Chr2g0313751 34.731 167 99 2 476 632 217 383 1.38e-22 103
Msa0980960 MtrunA17_Chr3g0137101 68.919 74 22 1 644 717 215 287 1.93e-22 103
Msa0980960 MtrunA17_Chr8g0362731 37.500 168 96 4 478 639 91 255 2.85e-22 100
Msa0980960 MtrunA17_Chr5g0446131 34.132 167 100 3 476 632 188 354 4.23e-22 101
Msa0980960 MtrunA17_Chr4g0004601 39.506 162 87 5 477 632 215 371 7.60e-22 100
Msa0980960 MtrunA17_Chr2g0313791 33.533 167 101 3 476 632 185 351 9.58e-22 100
Msa0980960 MtrunA17_Chr2g0313761 36.527 167 96 4 476 632 185 351 1.14e-21 100
Msa0980960 MtrunA17_Chr2g0313831 37.126 167 95 5 476 632 190 356 1.75e-21 99.8
Msa0980960 MtrunA17_Chr8g0336361 36.196 163 93 5 478 632 202 361 6.30e-19 92.0
Msa0980960 MtrunA17_Chr5g0433851 83.333 48 8 0 302 349 211 258 7.67e-19 90.5
Msa0980960 MtrunA17_Chr6g0457421 32.911 158 103 2 478 632 194 351 1.57e-18 90.5
Msa0980960 MtrunA17_Chr2g0288661 30.220 182 113 3 465 632 177 358 1.58e-17 87.4
Msa0980960 MtrunA17_Chr7g0215181 30.435 207 128 5 478 677 195 392 1.85e-17 87.0
Msa0980960 MtrunA17_Chr2g0313771 30.000 170 100 4 477 632 199 363 4.06e-17 86.3
Msa0980960 MtrunA17_Chr1g0203141 32.558 172 111 5 465 632 185 355 4.12e-17 85.9
Msa0980960 MtrunA17_Chr8g0354511 31.138 167 104 3 476 632 199 364 6.55e-17 85.5
Msa0980960 MtrunA17_Chr8g0354571 30.151 199 124 6 476 661 199 395 1.90e-16 84.0
Msa0980960 MtrunA17_Chr1g0149831 78.125 64 11 1 644 707 145 205 1.91e-16 80.1
Msa0980960 MtrunA17_Chr2g0307301 31.737 167 104 5 476 632 192 358 4.09e-16 82.8
Msa0980960 MtrunA17_Chr2g0307291 32.335 167 103 5 476 632 192 358 5.50e-16 82.4
Msa0980960 MtrunA17_Chr4g0014051 34.021 194 116 7 478 660 206 398 7.89e-16 82.0
Msa0980960 MtrunA17_Chr1g0203151 33.333 159 101 5 478 632 194 351 2.22e-15 80.5
Msa0980960 MtrunA17_Chr6g0479681 32.704 159 102 5 478 632 196 353 2.47e-15 80.5
Msa0980960 MtrunA17_Chr1g0149961 26.616 263 173 6 767 1015 211 467 3.38e-15 79.7
Msa0980960 MtrunA17_Chr4g0074171 26.236 263 174 6 767 1015 211 467 7.02e-14 75.9
Msa0980960 MtrunA17_Chr8g0354531 29.940 167 105 4 476 632 321 485 1.36e-13 75.1
Msa0980960 MtrunA17_Chr2g0308651 32.955 176 92 6 478 632 82 252 3.55e-13 73.2
Msa0980960 MtrunA17_Chr7g0275891 49.485 97 30 3 644 727 208 298 4.60e-13 72.0
Msa0980960 MtrunA17_Chr2g0294911 48.750 80 40 1 644 722 228 307 5.48e-13 73.2
Msa0980960 MtrunA17_Chr1g0161431 34.884 129 78 4 644 771 217 340 7.77e-13 72.8
Msa0980960 MtrunA17_Chr4g0067981 55.128 78 30 2 644 719 232 306 1.51e-12 72.0
Msa0980960 MtrunA17_Chr8g0364081 32.000 175 97 4 478 632 205 377 1.61e-12 71.6
Msa0980960 MtrunA17_Chr6g0472161 29.480 173 116 5 465 632 181 352 2.23e-12 70.1
Msa0980960 MtrunA17_Chr6g0472221 29.586 169 112 4 470 632 199 366 2.56e-12 70.9
Msa0980960 MtrunA17_Chr3g0128461 30.675 163 101 4 478 632 206 364 7.66e-12 69.3
Msa0980960 MtrunA17_Chr7g0226861 31.092 119 72 2 4 122 84 192 1.02e-11 69.3
Msa0980960 MtrunA17_Chr3g0084281 30.252 119 73 2 4 122 84 192 3.60e-11 67.8
Msa0980960 MtrunA17_Chr1g0165151 39.130 69 42 0 4 72 44 112 4.60e-11 61.6
Msa0980960 MtrunA17_Chr2g0304841 56.061 66 25 2 644 709 230 291 6.74e-11 66.6
Msa0980960 MtrunA17_Chr3g0082901 33.333 99 59 1 4 102 85 176 8.70e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0980960 AT3G24503.1 60.967 269 90 3 767 1020 211 479 3.35e-99 323
Msa0980960 AT3G48000.1 47.601 271 127 3 765 1020 246 516 3.38e-74 256
Msa0980960 AT1G23800.1 47.584 269 126 4 767 1020 244 512 1.45e-71 248
Msa0980960 AT1G74920.2 34.247 292 164 6 755 1019 177 467 1.02e-43 167
Msa0980960 AT1G74920.1 34.247 292 164 6 755 1019 182 472 1.17e-43 167
Msa0980960 AT1G75130.1 49.682 157 78 1 477 632 190 346 3.90e-43 165
Msa0980960 AT3G48170.1 34.944 269 157 5 768 1019 205 472 4.67e-43 165
Msa0980960 AT1G23800.2 48.936 141 62 2 767 897 244 384 1.20e-31 129
Msa0980960 AT2G26710.1 40.964 166 81 3 477 632 196 354 1.23e-29 125
Msa0980960 AT1G79440.1 30.682 264 169 3 768 1017 242 505 1.59e-28 122
Msa0980960 AT3G14640.1 39.759 166 87 6 476 632 193 354 5.90e-24 107
Msa0980960 AT3G14640.2 39.759 166 87 6 476 632 215 376 7.60e-24 107
Msa0980960 AT3G14620.1 35.256 156 100 1 478 632 198 353 7.71e-24 107
Msa0980960 AT2G46960.1 36.076 158 98 3 477 632 83 239 9.14e-24 105
Msa0980960 AT2G46950.2 37.013 154 95 2 481 632 256 409 1.27e-23 105
Msa0980960 AT2G46950.1 31.797 217 134 4 481 695 256 460 1.84e-23 106
Msa0980960 AT2G46960.2 36.076 158 98 3 477 632 199 355 3.23e-23 105
Msa0980960 AT3G14690.1 33.333 195 116 5 476 660 192 382 3.77e-23 105
Msa0980960 AT3G14690.2 33.333 195 116 5 476 660 227 417 4.88e-23 105
Msa0980960 AT4G27710.2 37.037 162 94 4 477 632 197 356 2.49e-22 100
Msa0980960 AT3G14630.1 32.812 192 121 4 476 660 188 378 4.08e-22 102
Msa0980960 AT3G14660.2 31.795 195 119 5 476 660 46 236 4.16e-22 100
Msa0980960 AT4G27710.1 30.493 223 139 4 477 695 197 407 4.34e-22 102
Msa0980960 AT3G14630.2 32.812 192 121 4 476 660 243 433 7.78e-22 101
Msa0980960 AT3G14650.1 32.821 195 117 5 476 660 192 382 1.35e-21 100
Msa0980960 AT3G14660.1 31.795 195 119 5 476 660 192 382 2.20e-21 99.8
Msa0980960 AT3G14680.1 31.250 192 124 4 476 660 192 382 2.36e-21 99.8
Msa0980960 AT3G14660.3 33.939 165 97 4 476 632 192 352 3.24e-21 97.8
Msa0980960 AT3G14610.1 33.333 171 106 4 467 632 184 351 2.48e-20 96.7
Msa0980960 AT3G66658.2 27.660 282 183 9 757 1020 237 515 3.41e-20 96.7
Msa0980960 AT3G66658.1 27.660 282 183 9 757 1020 237 515 4.91e-20 95.9
Msa0980960 AT3G17770.1 74.576 59 15 0 1019 1077 297 355 1.04e-18 92.0
Msa0980960 AT1G48430.2 72.881 59 16 0 1019 1077 297 355 1.29e-18 91.7
Msa0980960 AT1G48430.1 72.881 59 16 0 1019 1077 297 355 1.58e-18 91.3
Msa0980960 AT3G16857.3 56.250 64 28 0 644 707 184 247 3.37e-14 77.4
Msa0980960 AT3G16857.1 56.250 64 28 0 644 707 254 317 4.18e-14 77.4
Msa0980960 AT3G16857.2 56.250 64 28 0 644 707 254 317 4.45e-14 77.4
Msa0980960 AT1G54100.2 28.400 250 149 10 789 1019 240 478 4.96e-13 73.6
Msa0980960 AT1G54100.1 28.400 250 149 10 789 1019 240 478 4.96e-13 73.6
Msa0980960 AT2G24270.2 26.616 263 173 7 767 1015 251 507 6.03e-13 73.2
Msa0980960 AT2G25180.1 67.925 53 17 0 644 696 212 264 6.20e-13 73.6
Msa0980960 AT2G24270.3 26.616 263 173 7 767 1015 211 467 8.57e-13 72.8
Msa0980960 AT2G24270.1 26.616 263 173 7 767 1015 211 467 8.57e-13 72.8
Msa0980960 AT2G24270.4 26.616 263 173 7 767 1015 211 467 8.75e-13 72.8
Msa0980960 AT5G38450.1 33.939 165 97 3 478 632 196 358 9.00e-12 69.3
Msa0980960 AT5G58080.1 53.030 66 29 1 644 709 211 274 9.53e-12 69.7
Msa0980960 AT5G38450.2 34.911 169 90 5 478 632 196 358 9.99e-12 68.6

Find 209 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTCGAACAGGAGTTATT+TGG 0.188302 6_4:-19652223 Msa0980960:CDS
GGTTGCTCTTTGCAAAATAA+TGG 0.190049 6_4:-19654738 Msa0980960:CDS
ACTGGTAAGGTTAGCTTTAC+TGG 0.225096 6_4:-19652824 Msa0980960:CDS
TGAGGACCTTGTTGAACTTT+AGG 0.247900 6_4:+19652533 Msa0980950:intron
AAACCAGCTTCACTTGAATT+AGG 0.247929 6_4:-19652755 Msa0980960:CDS
ATTTATGACTTCTCTTGATA+TGG 0.249088 6_4:-19652093 Msa0980960:CDS
ATCTTAACCTGCTTGCTTTC+CGG 0.250108 6_4:+19655113 Msa0980950:intron
AATTAACATATTAGCAGAAT+TGG 0.258385 6_4:+19654371 Msa0980950:intron
TTAGGTAGAGTCTATACTTT+TGG 0.259554 6_4:+19653155 Msa0980950:intron
CTGAAACTAAAACTCCTTAT+TGG 0.266183 6_4:-19652013 Msa0980960:CDS
TATTAACCGTGCTGTTATTA+AGG 0.269939 6_4:-19652927 Msa0980960:CDS
AGTCCTGATCCTACACTTTA+TGG 0.272031 6_4:-19654564 Msa0980960:CDS
TCTTAACCTGCTTGCTTTCC+GGG 0.281944 6_4:+19655114 Msa0980950:intron
AGTAACTGTGACAAAGAATT+TGG 0.283055 6_4:-19652270 Msa0980960:CDS
CAAAATAATGGGAAGCATAT+TGG 0.284102 6_4:-19654726 Msa0980960:CDS
TGGTTGCGACACATTCTTTA+GGG 0.293767 6_4:+19654208 Msa0980950:intron
GAAAAGAGGGTTAATCAATT+AGG 0.296536 6_4:-19653259 Msa0980960:CDS
TTGTTATAGAGGTGTATTAA+AGG 0.297205 6_4:-19653809 Msa0980960:CDS
ACAGAAGGTGCAATGGTATT+TGG 0.304024 6_4:-19653000 Msa0980960:CDS
CAAACCGAGAACGATGTAAT+TGG 0.321464 6_4:-19654759 Msa0980960:CDS
GCCAGGCTTCTTGCTGGCCA+TGG 0.327168 6_4:-19653849 Msa0980960:CDS
TATTGGCCTGTTAGAGTTAG+TGG 0.328296 6_4:-19651996 Msa0980960:CDS
TTGGTTGCGACACATTCTTT+AGG 0.328802 6_4:+19654207 Msa0980950:intron
TGTACAACCTTTAATGAAAC+TGG 0.338472 6_4:-19654238 Msa0980960:CDS
ATTAATTGCTACTTTGCCTT+TGG 0.339812 6_4:-19652200 Msa0980960:CDS
AATAGCTAAATCCAGGGATA+TGG 0.347520 6_4:+19653602 Msa0980950:intron
TTTGGAAATGACATTCTCTA+TGG 0.347796 6_4:-19652182 Msa0980960:CDS
TCCTTCTCCAAGTTCGAATA+GGG 0.349178 6_4:+19655012 Msa0980950:intron
CATCCGGCCAGGCTTCTTGC+TGG 0.350968 6_4:-19653855 Msa0980960:CDS
TGGAATATTGTTTGTTATAG+AGG 0.356244 6_4:-19653820 Msa0980960:CDS
TTCAACAAGACGTGAAATAA+TGG 0.361036 6_4:-19652801 Msa0980960:CDS
TCCAACTCCACTTCTTAAAT+AGG 0.361147 6_4:+19653063 Msa0980950:intron
TGAGGCTAGTGACTGTGTTC+TGG 0.362072 6_4:-19654688 Msa0980960:CDS
AAGGGAGAAATTTGTGTTGC+GGG 0.367098 6_4:-19652650 Msa0980960:CDS
GTTGCTCTTTGCAAAATAAT+GGG 0.367657 6_4:-19654737 Msa0980960:CDS
CTAACTCTAACAGGCCAATA+AGG 0.374591 6_4:+19651999 Msa0980950:intron
TGATGAGGATAACACACTTT+TGG 0.374598 6_4:-19654541 Msa0980960:CDS
CGATTACCACTAACTCTAAC+AGG 0.376303 6_4:+19651990 Msa0980950:intron
ATCCTTCTCCAAGTTCGAAT+AGG 0.376656 6_4:+19655011 Msa0980950:intron
TTAACATTGGAGAAAATTGT+AGG 0.377777 6_4:+19652395 Msa0980950:intron
GAATGTAAAACCTACTTTGC+TGG 0.377877 6_4:-19653394 Msa0980960:CDS
GTATGTTGAATTATGAAAAT+CGG 0.382527 6_4:+19654824 Msa0980950:intron
ATTAACATATTAGCAGAATT+GGG 0.391197 6_4:+19654372 Msa0980950:intron
TTCAATGTAGTACCTGGATT+TGG 0.391760 6_4:-19652860 Msa0980960:CDS
GGAAGATAAGTGTTTGTTCC+AGG 0.392171 6_4:+19652959 Msa0980950:intron
ATTCCTTGCTGAAGTTGTAT+AGG 0.394035 6_4:+19654303 Msa0980950:intron
GAAGAAGTGCCAAAGTTAAC+AGG 0.394527 6_4:+19653353 Msa0980950:intron
CCCATGGCCAGCAAGAAGCC+TGG 0.405024 6_4:+19653848 Msa0980950:intron
GGGTCTGGTGGTGGCGGAGA+GGG 0.405348 6_4:+19654114 Msa0980950:intron
TTCTTCCGTTGCTACCTCCT+TGG 0.405663 6_4:+19654188 Msa0980950:intron
GCAACCAATTACATCGTTCT+CGG 0.408464 6_4:+19654755 Msa0980950:intron
TTCAAACAATCATCGTTGTC+TGG 0.414533 6_4:+19654090 Msa0980950:intron
TTCAACATACTTGTTATCAA+TGG 0.415765 6_4:-19654811 Msa0980960:CDS
CCAGGCTTCTTGCTGGCCAT+GGG 0.416133 6_4:-19653848 Msa0980960:CDS
TGAATTTGAGAAGAAGTTAG+TGG 0.419217 6_4:-19652594 Msa0980960:CDS
GGTTACAAGATGAGTGGGTT+TGG 0.425453 6_4:-19652158 Msa0980960:CDS
TGGGTCTGGTGGTGGCGGAG+AGG 0.429189 6_4:+19654113 Msa0980950:intron
GTGAAAGTTCAGACTGTGAT+TGG 0.429225 6_4:-19654407 Msa0980960:CDS
CGGATTTGTTTGTTGATTTG+CGG 0.431960 6_4:+19654044 Msa0980950:intron
GTTGTGAATGAATCTTTCTT+CGG 0.435110 6_4:+19654024 Msa0980950:intron
CCTCCTAATTCAAGTGAAGC+TGG 0.438912 6_4:+19652752 Msa0980950:intron
AACATCTAACCTGTTAACTT+TGG 0.439400 6_4:-19653362 Msa0980960:CDS
TTGTCTGGTGGGTCTGGTGG+TGG 0.444717 6_4:+19654105 Msa0980950:intron
TCATCGTTGTCTGGTGGGTC+TGG 0.445440 6_4:+19654099 Msa0980950:intron
GATACTTAATGATCATTGCT+TGG 0.446314 6_4:-19654604 Msa0980960:CDS
TGCATCTGAACTACTAGTTA+AGG 0.446478 6_4:+19653087 Msa0980950:intron
TGTTGAACTTTAGGATCAAA+AGG 0.452062 6_4:+19652542 Msa0980950:intron
TCTGGTGGGTCTGGTGGTGG+CGG 0.452363 6_4:+19654108 Msa0980950:intron
GTTGACAAATAGCTAAATCC+AGG 0.454203 6_4:+19653595 Msa0980950:intron
AGTGGGTTTGGAAGAGATTG+TGG 0.461016 6_4:-19652146 Msa0980960:CDS
TGAAAAGTACCGCATCTGTT+TGG 0.470770 6_4:-19655076 Msa0980960:CDS
ATTATTTCATATATTGAGCA+TGG 0.477894 6_4:-19652485 Msa0980960:CDS
GAGGCTGAGTTGCATATTCA+AGG 0.480186 6_4:-19654453 Msa0980960:CDS
GGAAAACAAACAAGGTCATA+TGG 0.480991 6_4:-19653116 Msa0980960:CDS
GCACGGTTAATAGATTCTCT+TGG 0.481270 6_4:+19652938 Msa0980950:intron
TTTATCAATTTCTATCATGA+AGG 0.481455 6_4:-19652066 Msa0980960:CDS
GTCGATTTCCTTCCTAGTGA+TGG 0.481687 6_4:-19653884 Msa0980960:CDS
CAACTAAGAAGAACAAAGAT+AGG 0.482446 6_4:-19653576 Msa0980960:CDS
CAACTCAGCCTCAACTGAAT+CGG 0.484787 6_4:+19654464 Msa0980950:intron
CCAAATAACTCCTGTTCGAA+TGG 0.486479 6_4:+19652223 Msa0980950:intron
GAAAGAACCCTATTCGAACT+TGG 0.486536 6_4:-19655019 Msa0980960:CDS
TTGTACATCATGAATTGAAC+CGG 0.489346 6_4:+19654254 Msa0980950:intron
GTATCAAGGTCCATTCGAAC+AGG 0.494369 6_4:-19652233 Msa0980960:CDS
CTTCCTCGAATTTAGATGAC+TGG 0.495477 6_4:+19653965 Msa0980950:intron
ATCTGAAATTCCAGCCGGTA+TGG 0.495993 6_4:+19652889 Msa0980950:intron
CATTAGCATCGTATTTAACA+AGG 0.497087 6_4:-19652669 Msa0980960:CDS
GTCGGAAGTGTCCATATCCC+TGG 0.499515 6_4:-19653613 Msa0980960:CDS
GATGCATCCTATTTAAGAAG+TGG 0.500111 6_4:-19653070 Msa0980960:CDS
TGGCCAGCAAGAAGCCTGGC+CGG 0.502144 6_4:+19653852 Msa0980950:intron
AAGACACGTGAAGAAATTGA+TGG 0.504719 6_4:-19653301 Msa0980960:CDS
AAAGCAAGAGCTTGGGCTGT+TGG 0.506234 6_4:-19652569 Msa0980960:CDS
TCACCATAAAGTGTAGGATC+AGG 0.509026 6_4:+19654561 Msa0980950:intron
AACAATCATCGTTGTCTGGT+GGG 0.512866 6_4:+19654094 Msa0980950:intron
CTAGAGAAGCAATTGAAAAG+AGG 0.512949 6_4:-19653273 Msa0980960:CDS
TGACTGTGTTCTGGCTGAAG+TGG 0.513722 6_4:-19654679 Msa0980960:CDS
CCTGCAGTTGCACCAAATCC+AGG 0.513945 6_4:+19652848 Msa0980950:intron
TATTAGCAAAATATCAAGAA+TGG 0.516199 6_4:-19653330 Msa0980960:CDS
TTTCGTGTGTTTGTTCAAGA+AGG 0.516942 6_4:-19652626 Msa0980960:CDS
TTTCTGCAGATGTTATATCA+AGG 0.517188 6_4:-19653717 Msa0980960:CDS
TCCTATTTAAGAAGTGGAGT+TGG 0.517242 6_4:-19653064 Msa0980960:CDS
GATGGAGTGTCCATCCGGCC+AGG 0.521277 6_4:-19653866 Msa0980960:CDS
TTACCAGTCATCTAAATTCG+AGG 0.521754 6_4:-19653968 Msa0980960:CDS
CATGAAGTTCAATACTATTG+AGG 0.522086 6_4:-19652336 Msa0980960:CDS
AGTTTCTACAAGAATGAAGT+TGG 0.522151 6_4:-19653454 Msa0980960:CDS
TTTGGTGCAACTGCAGGAAC+TGG 0.523481 6_4:-19652842 Msa0980960:CDS
CTAGTGATGGAGTGTCCATC+CGG 0.524370 6_4:-19653871 Msa0980960:CDS
GATGTATCAACCGCCGGTGA+AGG 0.525605 6_4:-19654886 Msa0980960:CDS
TGGCGAAGATAGACTACAGC+TGG 0.525660 6_4:-19653431 Msa0980960:CDS
ATAACATCTGCAGAAAGATC+AGG 0.525890 6_4:+19653724 Msa0980950:intron
TAAAGTTCAACAAGGTCCTC+AGG 0.526739 6_4:-19652531 Msa0980960:CDS
CTTGCTGGCCATGGGTGCCG+TGG 0.529511 6_4:-19653840 Msa0980960:CDS
TAGTGGACAAAGCAAGAGCT+TGG 0.531745 6_4:-19652577 Msa0980960:CDS
CCTGGATTTGGTGCAACTGC+AGG 0.534107 6_4:-19652848 Msa0980960:CDS
ATGACTTCTCTTGATATGGA+AGG 0.538051 6_4:-19652089 Msa0980960:CDS
CTACTTTACTTGAAAACAGA+AGG 0.542032 6_4:-19653015 Msa0980960:CDS
AGTGGACAAAGCAAGAGCTT+GGG 0.542455 6_4:-19652576 Msa0980960:CDS
CCAGCTTCACTTGAATTAGG+AGG 0.544210 6_4:-19652752 Msa0980960:CDS
GGAAAGCAAGCAGGTTAAGA+TGG 0.545078 6_4:-19655111 Msa0980960:CDS
CAGCAAGAAGCCTGGCCGGA+TGG 0.546158 6_4:+19653856 Msa0980950:intron
GATGTAGCAACTCTTTCGAC+AGG 0.546232 6_4:-19652455 Msa0980960:CDS
AAAGTACCGCATCTGTTTGG+TGG 0.547985 6_4:-19655073 Msa0980960:CDS
TCAGTATATCCACCCTTCAC+CGG 0.549465 6_4:+19654873 Msa0980950:intron
TTTCGACGTCATGGACGTCC+CGG 0.550444 6_4:-19655132 Msa0980960:CDS
GCGTACAACACAACTTGTCA+TGG 0.552039 6_4:-19652363 Msa0980960:CDS
AAACAATCATCGTTGTCTGG+TGG 0.555022 6_4:+19654093 Msa0980950:intron
GGAAATGACATTCTCTATGG+AGG 0.556285 6_4:-19652179 Msa0980960:CDS
TCAAGCACAATGCAACTACC+TGG 0.556515 6_4:-19652977 Msa0980960:CDS
TAGAGAAGCAATTGAAAAGA+GGG 0.557169 6_4:-19653272 Msa0980960:CDS
GGACGTCCCGGAAAGCAAGC+AGG 0.557424 6_4:-19655120 Msa0980960:CDS
CTTGAAAACAGAAGGTGCAA+TGG 0.560167 6_4:-19653007 Msa0980960:CDS
GTTTGGAAGAGATTGTGGAT+TGG 0.563201 6_4:-19652141 Msa0980960:CDS
CGGATGGACACTCCATCACT+AGG 0.563561 6_4:+19653872 Msa0980950:intron
CAAATAGATGAACTGAATGC+CGG 0.567205 6_4:-19654273 Msa0980960:CDS
ATGGAGGTTACAAGATGAGT+GGG 0.567343 6_4:-19652163 Msa0980960:CDS
ACAAGTCTGATCAATCGAAA+GGG 0.569603 6_4:-19654429 Msa0980960:CDS
TGAAAGTTCAGACTGTGATT+GGG 0.569942 6_4:-19654406 Msa0980960:CDS
TCGTTAAAGACCATACCGGC+TGG 0.570747 6_4:-19652899 Msa0980960:CDS
GGAGTATTCAATGTAGTACC+TGG 0.572314 6_4:-19652866 Msa0980960:CDS
ACGCATGGCCTCCTTAACAT+TGG 0.573171 6_4:+19652382 Msa0980950:intron
CAAGGGAGAAATTTGTGTTG+CGG 0.575569 6_4:-19652651 Msa0980960:CDS
CAGCCGTCACATTGAACTCA+AGG 0.575592 6_4:-19651943 Msa0980960:CDS
ACAATATTCCACGGCACCCA+TGG 0.576044 6_4:+19653832 Msa0980950:intron
ATGTATCAACCGCCGGTGAA+GGG 0.577296 6_4:-19654885 Msa0980960:CDS
CGCAACCAAGGAGGTAGCAA+CGG 0.578102 6_4:-19654193 Msa0980960:CDS
TGCAACTGCAGGAACTGGTA+AGG 0.578355 6_4:-19652837 Msa0980960:CDS
TTCTACAAGAATGAAGTTGG+TGG 0.580536 6_4:-19653451 Msa0980960:CDS
AACAAGTCTGATCAATCGAA+AGG 0.582103 6_4:-19654430 Msa0980960:CDS
ATATAGCAAGCACTGTATCA+AGG 0.582360 6_4:-19652247 Msa0980960:CDS
AAGTACCGCATCTGTTTGGT+GGG 0.583147 6_4:-19655072 Msa0980960:CDS
ATTAAAGGTTGATTTAATTG+CGG 0.585188 6_4:-19653794 Msa0980960:CDS
ACCCTATTCGAACTTGGAGA+AGG 0.585464 6_4:-19655013 Msa0980960:CDS
TGATTGTTTGAAAGAAGAGA+AGG 0.588098 6_4:-19654079 Msa0980960:CDS
TCCTACACTTTATGGTGATG+AGG 0.588971 6_4:-19654556 Msa0980960:CDS
ATACCGGCTGGAATTTCAGA+TGG 0.591251 6_4:-19652887 Msa0980960:CDS
ATAGAGAATGTCATTTCCAA+AGG 0.592177 6_4:+19652184 Msa0980950:intron
TATCAACCGCCGGTGAAGGG+TGG 0.592454 6_4:-19654882 Msa0980960:CDS
TGGTGTAGATTTGCATCATG+AGG 0.595637 6_4:-19654706 Msa0980960:CDS
AATTGCCTCTTGTCAACCTG+AGG 0.599117 6_4:+19652515 Msa0980950:intron
TCTAATCGTTGAAGAATAGA+CGG 0.601987 6_4:+19652038 Msa0980950:intron
GACAAGTTGTGTTGTACGCA+TGG 0.603255 6_4:+19652367 Msa0980950:intron
TATCAGATGATGCATATGCT+CGG 0.604184 6_4:-19654500 Msa0980960:CDS
TAAAGAATGTGTCGCAACCA+AGG 0.604764 6_4:-19654205 Msa0980960:CDS
GGAAGCAACTCTCGTCGCCA+CGG 0.605858 6_4:-19654908 Msa0980960:CDS
GAGTTCGTTAAAGACCATAC+CGG 0.606961 6_4:-19652903 Msa0980960:CDS
AGACACGTGAAGAAATTGAT+GGG 0.609154 6_4:-19653300 Msa0980960:CDS
TCTAAATTCGAGGAAGTGCA+AGG 0.610205 6_4:-19653958 Msa0980960:CDS
TCGTTGTCTGGTGGGTCTGG+TGG 0.611233 6_4:+19654102 Msa0980950:intron
GCAAACTGATTGAAACCAAG+AGG 0.611708 6_4:-19653519 Msa0980960:CDS
TATGGAGGTTACAAGATGAG+TGG 0.613797 6_4:-19652164 Msa0980960:CDS
GCCACGGATGTATCAACCGC+CGG 0.617157 6_4:-19654892 Msa0980960:CDS
TTATATATCCGATTCAGTTG+AGG 0.617814 6_4:-19654472 Msa0980960:CDS
ACTCCATCTGAAATTCCAGC+CGG 0.619008 6_4:+19652884 Msa0980950:intron
GATGATGCATATGCTCGGAA+AGG 0.619514 6_4:-19654495 Msa0980960:CDS
GTATATCCACCCTTCACCGG+CGG 0.625004 6_4:+19654876 Msa0980950:intron
TGGACACTCCATCACTAGGA+AGG 0.625199 6_4:+19653876 Msa0980950:intron
CTAAGAAGAACAAAGATAGG+TGG 0.625403 6_4:-19653573 Msa0980960:CDS
AACTCTCCTTAATAACAGCA+CGG 0.628330 6_4:+19652921 Msa0980950:intron
CTATAACAAACAATATTCCA+CGG 0.628635 6_4:+19653823 Msa0980950:intron
GACGAACTTAGCGAAACTGC+AGG 0.631047 6_4:+19653910 Msa0980950:intron
TGTTGATTTGCGGTAGCAAG+TGG 0.632722 6_4:+19654054 Msa0980950:intron
CATGAAAGATTTAACTCTCG+CGG 0.633915 6_4:-19654975 Msa0980960:CDS
TCAATGTGACGGCTGTGATG+CGG 0.637735 6_4:+19651951 Msa0980950:intron
TGCTTGGCATCAGATAATTG+TGG 0.638188 6_4:-19654588 Msa0980960:CDS
ATTAGCATCGTATTTAACAA+GGG 0.639693 6_4:-19652668 Msa0980960:CDS
ATGTGACGGCTGTGATGCGG+CGG 0.642061 6_4:+19651954 Msa0980950:intron
GGAGAGGGAACTGAGTCCGA+TGG 0.642062 6_4:+19654129 Msa0980950:intron
ATTCCTTGAGTTCAATGTGA+CGG 0.642305 6_4:+19651940 Msa0980950:intron
TGAAAATCTGACATGGGTGA+AGG 0.643653 6_4:-19653191 Msa0980960:CDS
TTGACAAATAGCTAAATCCA+GGG 0.645575 6_4:+19653596 Msa0980950:intron
GAAGGGTGGATATACTGAAG+AGG 0.646866 6_4:-19654868 Msa0980960:CDS
AAATCTGACATGGGTGAAGG+CGG 0.649189 6_4:-19653188 Msa0980960:CDS
TCCTCATCACCATAAAGTGT+AGG 0.649583 6_4:+19654555 Msa0980950:intron
AAGGTCCTCAGGTTGACAAG+AGG 0.654761 6_4:-19652520 Msa0980960:CDS
GGGTGGATATACTGAAGAGG+CGG 0.655174 6_4:-19654865 Msa0980960:CDS
TTGTTGATCAAGTATACACA+TGG 0.655805 6_4:-19652118 Msa0980960:CDS
TGAAGTGGATGACAAAAGAG+AGG 0.672707 6_4:-19654664 Msa0980960:CDS
TTTGATCCTAAAGTTCAACA+AGG 0.673250 6_4:-19652539 Msa0980960:CDS
AGTTGTGTGGAAAACAAACA+AGG 0.675905 6_4:-19653124 Msa0980960:CDS
TGAATGTTGAAAATCTGACA+TGG 0.677775 6_4:-19653198 Msa0980960:CDS
ACCGGCGGTTGATACATCCG+TGG 0.687874 6_4:+19654891 Msa0980950:intron
TCTCCTATACAACTTCAGCA+AGG 0.689990 6_4:-19654306 Msa0980960:CDS
AGTTGTATAGGAGAGCCCGA+TGG 0.690080 6_4:+19654315 Msa0980950:intron
TAATCAATTAGGCATTGACA+AGG 0.692865 6_4:-19653248 Msa0980960:CDS
GAATGTTGAAAATCTGACAT+GGG 0.692894 6_4:-19653197 Msa0980960:CDS
AGTTCAGACTGTGATTGGGA+TGG 0.696786 6_4:-19654402 Msa0980960:CDS
AGAATGTGTCGCAACCAAGG+AGG 0.723095 6_4:-19654202 Msa0980960:CDS
TCTATCCCACCAAACAGATG+CGG 0.724005 6_4:+19655067 Msa0980950:intron
AAAAGTTCGAAATTTCGACA+AGG 0.735682 6_4:+19654162 Msa0980950:intron
CATCTGCAGAAAGATCAGGA+AGG 0.757365 6_4:+19653728 Msa0980950:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTCGTTTTATTTTATTT+TGG - chr6_4:19654265-19654284 Msa0980960:CDS 10.0%
!! CTATTACTATTAAAAAAATT+TGG + chr6_4:19654747-19654766 Msa0980950:intron 10.0%
!!! AGTTTTTTTTTTTGATTTTT+TGG + chr6_4:19654956-19654975 Msa0980950:intron 10.0%
!! AGCATTATAAAAAATTAAGA+GGG + chr6_4:19653190-19653209 Msa0980950:intron 15.0%
!!! AATTTTTCAATTGAAACAAG+CGG + chr6_4:19650975-19650994 Msa0980950:intron 20.0%
!! GTATGTTGAATTATGAAAAT+CGG + chr6_4:19651087-19651106 Msa0980950:intron 20.0%
!! ATTAACATATTAGCAGAATT+GGG + chr6_4:19651539-19651558 Msa0980950:intron 20.0%
!! AATTAACATATTAGCAGAAT+TGG + chr6_4:19651540-19651559 Msa0980950:intron 20.0%
!!! ATTAAAGGTTGATTTAATTG+CGG - chr6_4:19652114-19652133 Msa0980960:CDS 20.0%
!!! ATATTTTCAAATTACAAGAG+CGG - chr6_4:19652248-19652267 Msa0980960:CDS 20.0%
!! TATTAGCAAAATATCAAGAA+TGG - chr6_4:19652578-19652597 Msa0980960:CDS 20.0%
!! GCATTATAAAAAATTAAGAG+GGG + chr6_4:19653189-19653208 Msa0980950:intron 20.0%
!! CAGCATTATAAAAAATTAAG+AGG + chr6_4:19653191-19653210 Msa0980950:intron 20.0%
!! ATTATTTCATATATTGAGCA+TGG - chr6_4:19653423-19653442 Msa0980960:CDS 20.0%
!! TTTATCAATTTCTATCATGA+AGG - chr6_4:19653842-19653861 Msa0980960:CDS 20.0%
!! TCTAGAAAATTACTAAGATT+TGG + chr6_4:19654233-19654252 Msa0980950:intron 20.0%
!! GAATCAATATATTAAATTGC+GGG + chr6_4:19655096-19655115 Msa0980950:intron 20.0%
!! GGAATCAATATATTAAATTG+CGG + chr6_4:19655097-19655116 Msa0980950:intron 20.0%
!!! ATTTAATATATTGATTCCAC+TGG - chr6_4:19655099-19655118 Msa0980960:CDS 20.0%
!! TAATATATCATAACTTGGTT+AGG + chr6_4:19655152-19655171 Msa0980950:intron 20.0%
!!! ATGTAGAAGAATTTTTGGAT+TGG - chr6_4:19650733-19650752 Msa0980960:CDS 25.0%
!!! TGTAGAAGAATTTTTGGATT+GGG - chr6_4:19650734-19650753 Msa0980960:CDS 25.0%
! GCTTGTTTCAATTGAAAAAT+TGG - chr6_4:19650974-19650993 Msa0980960:intron 25.0%
! TTTCAATTGAAAAATTGGAG+AGG - chr6_4:19650979-19650998 Msa0980960:intron 25.0%
!!! TTCAACATACTTGTTATCAA+TGG - chr6_4:19651097-19651116 Msa0980960:intron 25.0%
! AAAAACTCCAGTTTCATTAA+AGG + chr6_4:19651680-19651699 Msa0980950:intron 25.0%
! CTATAACAAACAATATTCCA+CGG + chr6_4:19652088-19652107 Msa0980950:intron 25.0%
!!! TGGAATATTGTTTGTTATAG+AGG - chr6_4:19652088-19652107 Msa0980960:CDS 25.0%
!! TTGTTATAGAGGTGTATTAA+AGG - chr6_4:19652099-19652118 Msa0980960:CDS 25.0%
!!! ACATCTATTTTTATGCTCAA+TGG + chr6_4:19652151-19652170 Msa0980950:intron 25.0%
!! ATCAGTTCAAGAATCTTTTT+CGG + chr6_4:19652691-19652710 Msa0980950:intron 25.0%
! ATTAGCATCGTATTTAACAA+GGG - chr6_4:19653240-19653259 Msa0980960:CDS 25.0%
! TTAACATTGGAGAAAATTGT+AGG + chr6_4:19653516-19653535 Msa0980950:intron 25.0%
!! TACAATTTTCTCCAATGTTA+AGG - chr6_4:19653515-19653534 Msa0980960:CDS 25.0%
! ATTTATGACTTCTCTTGATA+TGG - chr6_4:19653815-19653834 Msa0980960:CDS 25.0%
!!! TTTTATTTTATTTTGGCCCA+CGG - chr6_4:19654272-19654291 Msa0980960:CDS 25.0%
! CTACAAACCTATCAAAATAA+GGG + chr6_4:19654409-19654428 Msa0980950:intron 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG - chr6_4:19654463-19654482 Msa0980960:CDS 25.0%
! TAGTTGATTAGTGTTAATTG+TGG + chr6_4:19655028-19655047 Msa0980950:intron 25.0%
!!! TTATTGATTATTGATTCCAG+TGG + chr6_4:19655118-19655137 Msa0980950:intron 25.0%
! TGCTGTAATATATCATAACT+TGG + chr6_4:19655157-19655176 Msa0980950:intron 25.0%
GTTGCTCTTTGCAAAATAAT+GGG - chr6_4:19651171-19651190 Msa0980960:intron 30.0%
! CAAAATAATGGGAAGCATAT+TGG - chr6_4:19651182-19651201 Msa0980960:intron 30.0%
GATACTTAATGATCATTGCT+TGG - chr6_4:19651304-19651323 Msa0980960:intron 30.0%
TTATATATCCGATTCAGTTG+AGG - chr6_4:19651436-19651455 Msa0980960:intron 30.0%
! ATTGAAGCAGAAGCTTTTAA+TGG - chr6_4:19651557-19651576 Msa0980960:intron 30.0%
TTGTACATCATGAATTGAAC+CGG + chr6_4:19651657-19651676 Msa0980950:intron 30.0%
TGTACAACCTTTAATGAAAC+TGG - chr6_4:19651670-19651689 Msa0980960:intron 30.0%
AAAAGTTCGAAATTTCGACA+AGG + chr6_4:19651749-19651768 Msa0980950:intron 30.0%
! TGTCGAAATTTCGAACTTTT+TGG - chr6_4:19651749-19651768 Msa0980960:intron 30.0%
! GTCGAAATTTCGAACTTTTT+GGG - chr6_4:19651750-19651769 Msa0980960:intron 30.0%
TGATTGTTTGAAAGAAGAGA+AGG - chr6_4:19651829-19651848 Msa0980960:intron 30.0%
GTTGTGAATGAATCTTTCTT+CGG + chr6_4:19651887-19651906 Msa0980950:intron 30.0%
!!! GATGACTTGTCATTGATTTT+TGG - chr6_4:19651914-19651933 Msa0980960:intron 30.0%
TTTCTGCAGATGTTATATCA+AGG - chr6_4:19652191-19652210 Msa0980960:CDS 30.0%
TTGACAAATAGCTAAATCCA+GGG + chr6_4:19652315-19652334 Msa0980950:intron 30.0%
CAACTAAGAAGAACAAAGAT+AGG - chr6_4:19652332-19652351 Msa0980960:CDS 30.0%
! ATTTTCTTTAACACTCCTCT+TGG + chr6_4:19652407-19652426 Msa0980950:intron 30.0%
AGTTTCTACAAGAATGAAGT+TGG - chr6_4:19652454-19652473 Msa0980960:CDS 30.0%
AACATCTAACCTGTTAACTT+TGG - chr6_4:19652546-19652565 Msa0980960:CDS 30.0%
TAGAGAAGCAATTGAAAAGA+GGG - chr6_4:19652636-19652655 Msa0980960:CDS 30.0%
GAAAAGAGGGTTAATCAATT+AGG - chr6_4:19652649-19652668 Msa0980960:CDS 30.0%
!! TAATCAATTAGGCATTGACA+AGG - chr6_4:19652660-19652679 Msa0980960:CDS 30.0%
TGAATGTTGAAAATCTGACA+TGG - chr6_4:19652710-19652729 Msa0980960:CDS 30.0%
GAATGTTGAAAATCTGACAT+GGG - chr6_4:19652711-19652730 Msa0980960:CDS 30.0%
! TTAGGTAGAGTCTATACTTT+TGG + chr6_4:19652756-19652775 Msa0980950:intron 30.0%
CTACTTTACTTGAAAACAGA+AGG - chr6_4:19652893-19652912 Msa0980960:CDS 30.0%
! TATTAACCGTGCTGTTATTA+AGG - chr6_4:19652981-19653000 Msa0980960:CDS 30.0%
TTCAACAAGACGTGAAATAA+TGG - chr6_4:19653107-19653126 Msa0980960:CDS 30.0%
CATTAGCATCGTATTTAACA+AGG - chr6_4:19653239-19653258 Msa0980960:CDS 30.0%
TGAATTTGAGAAGAAGTTAG+TGG - chr6_4:19653314-19653333 Msa0980960:CDS 30.0%
!! TGTTGAACTTTAGGATCAAA+AGG + chr6_4:19653369-19653388 Msa0980950:intron 30.0%
TTTGATCCTAAAGTTCAACA+AGG - chr6_4:19653369-19653388 Msa0980960:CDS 30.0%
TCGACAGGTAGTAAAAAAAT+TGG - chr6_4:19653468-19653487 Msa0980960:CDS 30.0%
! AATTTTCTCCAATGTTAAGG+AGG - chr6_4:19653518-19653537 Msa0980960:CDS 30.0%
CATGAAGTTCAATACTATTG+AGG - chr6_4:19653572-19653591 Msa0980960:CDS 30.0%
AGTAACTGTGACAAAGAATT+TGG - chr6_4:19653638-19653657 Msa0980960:CDS 30.0%
!! ATTAATTGCTACTTTGCCTT+TGG - chr6_4:19653708-19653727 Msa0980960:CDS 30.0%
! ATAGAGAATGTCATTTCCAA+AGG + chr6_4:19653727-19653746 Msa0980950:intron 30.0%
TTTGGAAATGACATTCTCTA+TGG - chr6_4:19653726-19653745 Msa0980960:CDS 30.0%
TTGTTGATCAAGTATACACA+TGG - chr6_4:19653790-19653809 Msa0980960:CDS 30.0%
TCTAATCGTTGAAGAATAGA+CGG + chr6_4:19653873-19653892 Msa0980950:intron 30.0%
CTGAAACTAAAACTCCTTAT+TGG - chr6_4:19653895-19653914 Msa0980960:CDS 30.0%
!!! TTTATTTTATTTTGGCCCAC+GGG - chr6_4:19654273-19654292 Msa0980960:CDS 30.0%
GCTACAAACCTATCAAAATA+AGG + chr6_4:19654410-19654429 Msa0980950:intron 30.0%
GATTTCTTTGGCAAATGTTT+AGG + chr6_4:19654868-19654887 Msa0980950:intron 30.0%
! GTTTGTTGAAATGTGTTACA+TGG + chr6_4:19654892-19654911 Msa0980950:intron 30.0%
GTAACACATTTCAACAAACA+CGG - chr6_4:19654893-19654912 Msa0980960:CDS 30.0%
TAACACATTTCAACAAACAC+GGG - chr6_4:19654894-19654913 Msa0980960:CDS 30.0%
TTTCAACGAACAAGATGAAA+AGG - chr6_4:19654930-19654949 Msa0980960:CDS 30.0%
AGGTCAGTTATAAATTGCTT+CGG - chr6_4:19654996-19655015 Msa0980960:CDS 30.0%
TCAATATATTAAATTGCGGG+CGG + chr6_4:19655093-19655112 Msa0980950:intron 30.0%
CATAACTTGGTTAGGAATTA+TGG + chr6_4:19655144-19655163 Msa0980950:intron 30.0%
CATGAAAGATTTAACTCTCG+CGG - chr6_4:19650933-19650952 Msa0980960:intron 35.0%
GGTTGCTCTTTGCAAAATAA+TGG - chr6_4:19651170-19651189 Msa0980960:intron 35.0%
! TGATGAGGATAACACACTTT+TGG - chr6_4:19651367-19651386 Msa0980960:intron 35.0%
!!! AACACACTTTTGGAATTGTC+TGG - chr6_4:19651377-19651396 Msa0980960:intron 35.0%
TATCAGATGATGCATATGCT+CGG - chr6_4:19651408-19651427 Msa0980960:intron 35.0%
AACAAGTCTGATCAATCGAA+AGG - chr6_4:19651478-19651497 Msa0980960:intron 35.0%
ACAAGTCTGATCAATCGAAA+GGG - chr6_4:19651479-19651498 Msa0980960:intron 35.0%
TGAAAGTTCAGACTGTGATT+GGG - chr6_4:19651502-19651521 Msa0980960:intron 35.0%
ATTCCTTGCTGAAGTTGTAT+AGG + chr6_4:19651608-19651627 Msa0980950:intron 35.0%
CAAATAGATGAACTGAATGC+CGG - chr6_4:19651635-19651654 Msa0980960:intron 35.0%
TTCAAACAATCATCGTTGTC+TGG + chr6_4:19651821-19651840 Msa0980950:intron 35.0%
!! CGGATTTGTTTGTTGATTTG+CGG + chr6_4:19651867-19651886 Msa0980950:intron 35.0%
TTACCAGTCATCTAAATTCG+AGG - chr6_4:19651940-19651959 Msa0980960:CDS 35.0%
ATAACATCTGCAGAAAGATC+AGG + chr6_4:19652187-19652206 Msa0980950:intron 35.0%
!!! TTTTAGCAGCAGTTTTGAAG+AGG - chr6_4:19652219-19652238 Msa0980960:CDS 35.0%
!!! TTTAGCAGCAGTTTTGAAGA+GGG - chr6_4:19652220-19652239 Msa0980960:CDS 35.0%
AATAGCTAAATCCAGGGATA+TGG + chr6_4:19652309-19652328 Msa0980950:intron 35.0%
GTTGACAAATAGCTAAATCC+AGG + chr6_4:19652316-19652335 Msa0980950:intron 35.0%
CTAAGAAGAACAAAGATAGG+TGG - chr6_4:19652335-19652354 Msa0980960:CDS 35.0%
TTCTACAAGAATGAAGTTGG+TGG - chr6_4:19652457-19652476 Msa0980960:CDS 35.0%
GAATGTAAAACCTACTTTGC+TGG - chr6_4:19652514-19652533 Msa0980960:CDS 35.0%
! TGTATCTTTTCCAGCAAAGT+AGG + chr6_4:19652527-19652546 Msa0980950:intron 35.0%
AAGACACGTGAAGAAATTGA+TGG - chr6_4:19652607-19652626 Msa0980960:CDS 35.0%
AGACACGTGAAGAAATTGAT+GGG - chr6_4:19652608-19652627 Msa0980960:CDS 35.0%
CTAGAGAAGCAATTGAAAAG+AGG - chr6_4:19652635-19652654 Msa0980960:CDS 35.0%
!! AGAGTCTATACTTTTGGAGA+CGG + chr6_4:19652750-19652769 Msa0980950:intron 35.0%
! CCACACAACTAACTCTTTTT+AGG + chr6_4:19652774-19652793 Msa0980950:intron 35.0%
CCTAAAAAGAGTTAGTTGTG+TGG - chr6_4:19652771-19652790 Msa0980960:CDS 35.0%
AGTTGTGTGGAAAACAAACA+AGG - chr6_4:19652784-19652803 Msa0980960:CDS 35.0%
GGAAAACAAACAAGGTCATA+TGG - chr6_4:19652792-19652811 Msa0980960:CDS 35.0%
TGCATCTGAACTACTAGTTA+AGG + chr6_4:19652824-19652843 Msa0980950:intron 35.0%
GATGCATCCTATTTAAGAAG+TGG - chr6_4:19652838-19652857 Msa0980960:CDS 35.0%
TCCTATTTAAGAAGTGGAGT+TGG - chr6_4:19652844-19652863 Msa0980960:CDS 35.0%
TCCAACTCCACTTCTTAAAT+AGG + chr6_4:19652848-19652867 Msa0980950:intron 35.0%
AACTCTCCTTAATAACAGCA+CGG + chr6_4:19652990-19653009 Msa0980950:intron 35.0%
TTCAATGTAGTACCTGGATT+TGG - chr6_4:19653048-19653067 Msa0980960:CDS 35.0%
AAACCAGCTTCACTTGAATT+AGG - chr6_4:19653153-19653172 Msa0980960:CDS 35.0%
TTTCGTGTGTTTGTTCAAGA+AGG - chr6_4:19653282-19653301 Msa0980960:CDS 35.0%
! ATATAGCAAGCACTGTATCA+AGG - chr6_4:19653661-19653680 Msa0980960:CDS 35.0%
ATGACTTCTCTTGATATGGA+AGG - chr6_4:19653819-19653838 Msa0980960:CDS 35.0%
ATTCCTTGAGTTCAATGTGA+CGG + chr6_4:19653971-19653990 Msa0980950:intron 35.0%
CAAGGAATTGCATGTAGATT+TGG - chr6_4:19653983-19654002 Msa0980960:CDS 35.0%
! ATGTAGATTTGGTTCACTTC+AGG - chr6_4:19653994-19654013 Msa0980960:CDS 35.0%
GGAGTCTATATTCTGATCAA+AGG - chr6_4:19654015-19654034 Msa0980960:CDS 35.0%
AGTGAAATGTAAGTGCTTGA+CGG + chr6_4:19654054-19654073 Msa0980950:intron 35.0%
AGCACTTACATTTCACTCAA+TGG - chr6_4:19654057-19654076 Msa0980960:CDS 35.0%
GCACTTACATTTCACTCAAT+GGG - chr6_4:19654058-19654077 Msa0980960:CDS 35.0%
TTTATCAGAATGAGAACTCG+AGG - chr6_4:19654135-19654154 Msa0980960:CDS 35.0%
GAAAGAAATAACAAACCCGT+GGG + chr6_4:19654291-19654310 Msa0980950:intron 35.0%
TGAAAGAAATAACAAACCCG+TGG + chr6_4:19654292-19654311 Msa0980950:intron 35.0%
CATAACTTATGTAGCCTAAG+AGG - chr6_4:19654321-19654340 Msa0980960:CDS 35.0%
! AATCAAAAAGTGTGCCTCTT+AGG + chr6_4:19654338-19654357 Msa0980950:intron 35.0%
! TCGAGATTTTCTCTCAATTC+TGG - chr6_4:19654370-19654389 Msa0980960:CDS 35.0%
! AGATTTTCTCTCAATTCTGG+TGG - chr6_4:19654373-19654392 Msa0980960:CDS 35.0%
CCTATCAAAATAAGGGTTTC+CGG + chr6_4:19654402-19654421 Msa0980950:intron 35.0%
GCGACAAACTTGTGAAAATA+GGG + chr6_4:19654439-19654458 Msa0980950:intron 35.0%
AGCGACAAACTTGTGAAAAT+AGG + chr6_4:19654440-19654459 Msa0980950:intron 35.0%
ACTTGCAATGAACAACATTG+AGG - chr6_4:19654543-19654562 Msa0980960:CDS 35.0%
CTTGCAATGAACAACATTGA+GGG - chr6_4:19654544-19654563 Msa0980960:CDS 35.0%
AAATTCACAGAGAGAAGCTA+TGG - chr6_4:19654617-19654636 Msa0980960:CDS 35.0%
TGAAGTAGACAGCAAGTATT+TGG - chr6_4:19654641-19654660 Msa0980960:CDS 35.0%
!! TTCAAAGTGCTGTCAAATAG+TGG + chr6_4:19654690-19654709 Msa0980950:intron 35.0%
GTGTTACATGGTGATTTCTT+TGG + chr6_4:19654880-19654899 Msa0980950:intron 35.0%
GGTCAGTTATAAATTGCTTC+GGG - chr6_4:19654997-19655016 Msa0980960:CDS 35.0%
!! TGACAGATTTTTCGACGTCA+TGG - chr6_4:19650767-19650786 Msa0980960:intron 40.0%
ATCTTAACCTGCTTGCTTTC+CGG + chr6_4:19650798-19650817 Msa0980950:intron 40.0%
!! TGAAAAGTACCGCATCTGTT+TGG - chr6_4:19650832-19650851 Msa0980960:intron 40.0%
GAAAGAACCCTATTCGAACT+TGG - chr6_4:19650889-19650908 Msa0980960:intron 40.0%
TCCTTCTCCAAGTTCGAATA+GGG + chr6_4:19650899-19650918 Msa0980950:intron 40.0%
ATCCTTCTCCAAGTTCGAAT+AGG + chr6_4:19650900-19650919 Msa0980950:intron 40.0%
CAAACCGAGAACGATGTAAT+TGG - chr6_4:19651149-19651168 Msa0980960:intron 40.0%
GCAACCAATTACATCGTTCT+CGG + chr6_4:19651156-19651175 Msa0980950:intron 40.0%
TGGTGTAGATTTGCATCATG+AGG - chr6_4:19651202-19651221 Msa0980960:intron 40.0%
TGAAGTGGATGACAAAAGAG+AGG - chr6_4:19651244-19651263 Msa0980960:intron 40.0%
TGCTTGGCATCAGATAATTG+TGG - chr6_4:19651320-19651339 Msa0980960:intron 40.0%
AGTCCTGATCCTACACTTTA+TGG - chr6_4:19651344-19651363 Msa0980960:intron 40.0%
TCACCATAAAGTGTAGGATC+AGG + chr6_4:19651350-19651369 Msa0980950:intron 40.0%
! TCCTACACTTTATGGTGATG+AGG - chr6_4:19651352-19651371 Msa0980960:intron 40.0%
TCCTCATCACCATAAAGTGT+AGG + chr6_4:19651356-19651375 Msa0980950:intron 40.0%
GTGAAAGTTCAGACTGTGAT+TGG - chr6_4:19651501-19651520 Msa0980960:intron 40.0%
! AGCAGAAGCTTTTAATGGTC+TGG - chr6_4:19651562-19651581 Msa0980960:intron 40.0%
TCTCCTATACAACTTCAGCA+AGG - chr6_4:19651602-19651621 Msa0980960:intron 40.0%
TGGTTGCGACACATTCTTTA+GGG + chr6_4:19651703-19651722 Msa0980950:intron 40.0%
TTGGTTGCGACACATTCTTT+AGG + chr6_4:19651704-19651723 Msa0980950:intron 40.0%
TAAAGAATGTGTCGCAACCA+AGG - chr6_4:19651703-19651722 Msa0980960:intron 40.0%
!!! ACTTTTTGGGACAGATCCAT+CGG - chr6_4:19651763-19651782 Msa0980960:intron 40.0%
AACAATCATCGTTGTCTGGT+GGG + chr6_4:19651817-19651836 Msa0980950:intron 40.0%
AAACAATCATCGTTGTCTGG+TGG + chr6_4:19651818-19651837 Msa0980950:intron 40.0%
CTTCCTCGAATTTAGATGAC+TGG + chr6_4:19651946-19651965 Msa0980950:intron 40.0%
! TCTAAATTCGAGGAAGTGCA+AGG - chr6_4:19651950-19651969 Msa0980960:CDS 40.0%
! CATCTTTTCTCACAAGCAGT+CGG - chr6_4:19652277-19652296 Msa0980960:CDS 40.0%
GCAAACTGATTGAAACCAAG+AGG - chr6_4:19652389-19652408 Msa0980960:CDS 40.0%
!! GAAGAAGTGCCAAAGTTAAC+AGG + chr6_4:19652558-19652577 Msa0980950:intron 40.0%
TGAAAATCTGACATGGGTGA+AGG - chr6_4:19652717-19652736 Msa0980960:CDS 40.0%
! CTTGAAAACAGAAGGTGCAA+TGG - chr6_4:19652901-19652920 Msa0980960:CDS 40.0%
! ACAGAAGGTGCAATGGTATT+TGG - chr6_4:19652908-19652927 Msa0980960:CDS 40.0%
GGAAGATAAGTGTTTGTTCC+AGG + chr6_4:19652952-19652971 Msa0980950:intron 40.0%
GCACGGTTAATAGATTCTCT+TGG + chr6_4:19652973-19652992 Msa0980950:intron 40.0%
GAGTTCGTTAAAGACCATAC+CGG - chr6_4:19653005-19653024 Msa0980960:CDS 40.0%
! GGAGTATTCAATGTAGTACC+TGG - chr6_4:19653042-19653061 Msa0980960:CDS 40.0%
!! ACTGGTAAGGTTAGCTTTAC+TGG - chr6_4:19653084-19653103 Msa0980960:CDS 40.0%
CAAGGGAGAAATTTGTGTTG+CGG - chr6_4:19653257-19653276 Msa0980960:CDS 40.0%
AAGGGAGAAATTTGTGTTGC+GGG - chr6_4:19653258-19653277 Msa0980960:CDS 40.0%
TGAGGACCTTGTTGAACTTT+AGG + chr6_4:19653378-19653397 Msa0980950:intron 40.0%
TAAAGTTCAACAAGGTCCTC+AGG - chr6_4:19653377-19653396 Msa0980960:CDS 40.0%
CCAAATAACTCCTGTTCGAA+TGG + chr6_4:19653688-19653707 Msa0980950:intron 40.0%
CCATTCGAACAGGAGTTATT+TGG - chr6_4:19653685-19653704 Msa0980960:CDS 40.0%
GGAAATGACATTCTCTATGG+AGG - chr6_4:19653729-19653748 Msa0980960:CDS 40.0%
TATGGAGGTTACAAGATGAG+TGG - chr6_4:19653744-19653763 Msa0980960:CDS 40.0%
ATGGAGGTTACAAGATGAGT+GGG - chr6_4:19653745-19653764 Msa0980960:CDS 40.0%
GTTTGGAAGAGATTGTGGAT+TGG - chr6_4:19653767-19653786 Msa0980960:CDS 40.0%
CTAACTCTAACAGGCCAATA+AGG + chr6_4:19653912-19653931 Msa0980950:intron 40.0%
! TATTGGCCTGTTAGAGTTAG+TGG - chr6_4:19653912-19653931 Msa0980960:CDS 40.0%
CGATTACCACTAACTCTAAC+AGG + chr6_4:19653921-19653940 Msa0980950:intron 40.0%
GTGAAATGTAAGTGCTTGAC+GGG + chr6_4:19654053-19654072 Msa0980950:intron 40.0%
ATTGAAGGAGTCAACATGCA+TGG - chr6_4:19654105-19654124 Msa0980960:CDS 40.0%
TTGAAGGAGTCAACATGCAT+GGG - chr6_4:19654106-19654125 Msa0980960:CDS 40.0%
!!! CCGGAAACCCTTATTTTGAT+AGG - chr6_4:19654399-19654418 Msa0980960:CDS 40.0%
AGTGGCTATAGCAGTGTAAT+GGG + chr6_4:19654810-19654829 Msa0980950:intron 40.0%
TAGTGGCTATAGCAGTGTAA+TGG + chr6_4:19654811-19654830 Msa0980950:intron 40.0%
ATAGCCACTATTTGACAGCA+TGG - chr6_4:19654821-19654840 Msa0980960:CDS 40.0%
TAGCCACTATTTGACAGCAT+GGG - chr6_4:19654822-19654841 Msa0980960:CDS 40.0%
ATATCTCCACAATCACAACG+TGG - chr6_4:19655047-19655066 Msa0980960:CDS 40.0%
TCTTAACCTGCTTGCTTTCC+GGG + chr6_4:19650797-19650816 Msa0980950:intron 45.0%
GGAAAGCAAGCAGGTTAAGA+TGG - chr6_4:19650797-19650816 Msa0980960:intron 45.0%
!! AAAGTACCGCATCTGTTTGG+TGG - chr6_4:19650835-19650854 Msa0980960:intron 45.0%
! AAGTACCGCATCTGTTTGGT+GGG - chr6_4:19650836-19650855 Msa0980960:intron 45.0%
TCTATCCCACCAAACAGATG+CGG + chr6_4:19650844-19650863 Msa0980950:intron 45.0%
ACCCTATTCGAACTTGGAGA+AGG - chr6_4:19650895-19650914 Msa0980960:intron 45.0%
TCAGTATATCCACCCTTCAC+CGG + chr6_4:19651038-19651057 Msa0980950:intron 45.0%
GAAGGGTGGATATACTGAAG+AGG - chr6_4:19651040-19651059 Msa0980960:intron 45.0%
GATGATGCATATGCTCGGAA+AGG - chr6_4:19651413-19651432 Msa0980960:intron 45.0%
CAACTCAGCCTCAACTGAAT+CGG + chr6_4:19651447-19651466 Msa0980950:intron 45.0%
GAGGCTGAGTTGCATATTCA+AGG - chr6_4:19651455-19651474 Msa0980960:intron 45.0%
AGTTCAGACTGTGATTGGGA+TGG - chr6_4:19651506-19651525 Msa0980960:intron 45.0%
TGGTCTGGTGCAAAAACCAT+CGG - chr6_4:19651577-19651596 Msa0980960:intron 45.0%
!! TGTTGATTTGCGGTAGCAAG+TGG + chr6_4:19651857-19651876 Msa0980950:intron 45.0%
! GTCGATTTCCTTCCTAGTGA+TGG - chr6_4:19652024-19652043 Msa0980960:CDS 45.0%
CATCTGCAGAAAGATCAGGA+AGG + chr6_4:19652183-19652202 Msa0980950:intron 45.0%
AAATCTGACATGGGTGAAGG+CGG - chr6_4:19652720-19652739 Msa0980960:CDS 45.0%
!! TCTATACTTTTGGAGACGGC+TGG + chr6_4:19652746-19652765 Msa0980950:intron 45.0%
TCAAGCACAATGCAACTACC+TGG - chr6_4:19652931-19652950 Msa0980960:CDS 45.0%
! ATCTGAAATTCCAGCCGGTA+TGG + chr6_4:19653022-19653041 Msa0980950:intron 45.0%
! ATACCGGCTGGAATTTCAGA+TGG - chr6_4:19653021-19653040 Msa0980960:CDS 45.0%
! ACTCCATCTGAAATTCCAGC+CGG + chr6_4:19653027-19653046 Msa0980950:intron 45.0%
CCTCCTAATTCAAGTGAAGC+TGG + chr6_4:19653159-19653178 Msa0980950:intron 45.0%
CCAGCTTCACTTGAATTAGG+AGG - chr6_4:19653156-19653175 Msa0980960:CDS 45.0%
! TAGTGGACAAAGCAAGAGCT+TGG - chr6_4:19653331-19653350 Msa0980960:CDS 45.0%
AGTGGACAAAGCAAGAGCTT+GGG - chr6_4:19653332-19653351 Msa0980960:CDS 45.0%
AATTGCCTCTTGTCAACCTG+AGG + chr6_4:19653396-19653415 Msa0980950:intron 45.0%
GATGTAGCAACTCTTTCGAC+AGG - chr6_4:19653453-19653472 Msa0980960:CDS 45.0%
GACAAGTTGTGTTGTACGCA+TGG + chr6_4:19653544-19653563 Msa0980950:intron 45.0%
GCGTACAACACAACTTGTCA+TGG - chr6_4:19653545-19653564 Msa0980960:CDS 45.0%
GTATCAAGGTCCATTCGAAC+AGG - chr6_4:19653675-19653694 Msa0980960:CDS 45.0%
! GGTTACAAGATGAGTGGGTT+TGG - chr6_4:19653750-19653769 Msa0980960:CDS 45.0%
! AGTGGGTTTGGAAGAGATTG+TGG - chr6_4:19653762-19653781 Msa0980960:CDS 45.0%
! AATGTAAGTGCTTGACGGGT+GGG + chr6_4:19654049-19654068 Msa0980950:intron 45.0%
AAATGTAAGTGCTTGACGGG+TGG + chr6_4:19654050-19654069 Msa0980950:intron 45.0%
CATTTCACTCAATGGGATCC+AGG - chr6_4:19654065-19654084 Msa0980960:CDS 45.0%
GGTGGTCTCTTGTTCATTGA+AGG - chr6_4:19654090-19654109 Msa0980960:CDS 45.0%
!! CTCTCAATTCTGGTGGATTC+CGG - chr6_4:19654380-19654399 Msa0980960:CDS 45.0%
GATCCCATGCTGTCAAATAG+TGG + chr6_4:19654828-19654847 Msa0980950:intron 45.0%
CAGCACACAGCAAGTACATT+AGG - chr6_4:19654976-19654995 Msa0980960:CDS 45.0%
ATGTATCAACCGCCGGTGAA+GGG - chr6_4:19651023-19651042 Msa0980960:intron 50.0%
GGGTGGATATACTGAAGAGG+CGG - chr6_4:19651043-19651062 Msa0980960:intron 50.0%
TGAGGCTAGTGACTGTGTTC+TGG - chr6_4:19651220-19651239 Msa0980960:intron 50.0%
! TGACTGTGTTCTGGCTGAAG+TGG - chr6_4:19651229-19651248 Msa0980960:intron 50.0%
GGTCTGGTGCAAAAACCATC+GGG - chr6_4:19651578-19651597 Msa0980960:intron 50.0%
AGTTGTATAGGAGAGCCCGA+TGG + chr6_4:19651596-19651615 Msa0980950:intron 50.0%
AGAATGTGTCGCAACCAAGG+AGG - chr6_4:19651706-19651725 Msa0980960:intron 50.0%
TTCTTCCGTTGCTACCTCCT+TGG + chr6_4:19651723-19651742 Msa0980950:intron 50.0%
GACGAACTTAGCGAAACTGC+AGG + chr6_4:19652001-19652020 Msa0980950:intron 50.0%
TGGACACTCCATCACTAGGA+AGG + chr6_4:19652035-19652054 Msa0980950:intron 50.0%
! CTAGTGATGGAGTGTCCATC+CGG - chr6_4:19652037-19652056 Msa0980960:CDS 50.0%
ACAATATTCCACGGCACCCA+TGG + chr6_4:19652079-19652098 Msa0980950:intron 50.0%
TGGCGAAGATAGACTACAGC+TGG - chr6_4:19652477-19652496 Msa0980960:CDS 50.0%
TCGTTAAAGACCATACCGGC+TGG - chr6_4:19653009-19653028 Msa0980960:CDS 50.0%
! TTTGGTGCAACTGCAGGAAC+TGG - chr6_4:19653066-19653085 Msa0980960:CDS 50.0%
TGCAACTGCAGGAACTGGTA+AGG - chr6_4:19653071-19653090 Msa0980960:CDS 50.0%
AAAGCAAGAGCTTGGGCTGT+TGG - chr6_4:19653339-19653358 Msa0980960:CDS 50.0%
!! AAGGTCCTCAGGTTGACAAG+AGG - chr6_4:19653388-19653407 Msa0980960:CDS 50.0%
ACGCATGGCCTCCTTAACAT+TGG + chr6_4:19653529-19653548 Msa0980950:intron 50.0%
TCAATGTGACGGCTGTGATG+CGG + chr6_4:19653960-19653979 Msa0980950:intron 50.0%
CAGCCGTCACATTGAACTCA+AGG - chr6_4:19653965-19653984 Msa0980960:CDS 50.0%
! ATGTAAGTGCTTGACGGGTG+GGG + chr6_4:19654048-19654067 Msa0980950:intron 50.0%
TTCACTCAATGGGATCCAGG+AGG - chr6_4:19654068-19654087 Msa0980960:CDS 50.0%
TCACTCAATGGGATCCAGGA+GGG - chr6_4:19654069-19654088 Msa0980960:CDS 50.0%
TATGCCTGTGTGACGCAGTA+CGG + chr6_4:19654514-19654533 Msa0980950:intron 50.0%
!! GCAGTGTAATGGGTTGTGCA+TGG + chr6_4:19654800-19654819 Msa0980950:intron 50.0%
TTTCGACGTCATGGACGTCC+CGG - chr6_4:19650776-19650795 Msa0980960:intron 55.0%
GATGTATCAACCGCCGGTGA+AGG - chr6_4:19651022-19651041 Msa0980960:intron 55.0%
GTATATCCACCCTTCACCGG+CGG + chr6_4:19651035-19651054 Msa0980950:intron 55.0%
CGCAACCAAGGAGGTAGCAA+CGG - chr6_4:19651715-19651734 Msa0980960:intron 55.0%
! TCATCGTTGTCTGGTGGGTC+TGG + chr6_4:19651812-19651831 Msa0980950:intron 55.0%
CGGATGGACACTCCATCACT+AGG + chr6_4:19652039-19652058 Msa0980950:intron 55.0%
!! GTCGGAAGTGTCCATATCCC+TGG - chr6_4:19652295-19652314 Msa0980960:CDS 55.0%
CCTGCAGTTGCACCAAATCC+AGG + chr6_4:19653063-19653082 Msa0980950:intron 55.0%
!! CCTGGATTTGGTGCAACTGC+AGG - chr6_4:19653060-19653079 Msa0980960:CDS 55.0%
TGAACAAGAGACCACCCTCC+TGG + chr6_4:19654086-19654105 Msa0980950:intron 55.0%
CTCGAGGTCGAGTTCTTCAG+AGG - chr6_4:19654151-19654170 Msa0980960:CDS 55.0%
GAGGTCGAGTTCTTCAGAGG+TGG - chr6_4:19654154-19654173 Msa0980960:CDS 55.0%
GTCGAGTTCTTCAGAGGTGG+AGG - chr6_4:19654157-19654176 Msa0980960:CDS 55.0%
TGGAGGAGACTGATGCAGGA+GGG - chr6_4:19654174-19654193 Msa0980960:CDS 55.0%
! TGACGCAGTACGGAAGCGTA+GGG + chr6_4:19654504-19654523 Msa0980950:intron 55.0%
CTGCTGCCACGTTGTGATTG+TGG + chr6_4:19655056-19655075 Msa0980950:intron 55.0%
GGAAGCAACTCTCGTCGCCA+CGG - chr6_4:19651000-19651019 Msa0980960:intron 60.0%
GCCACGGATGTATCAACCGC+CGG - chr6_4:19651016-19651035 Msa0980960:intron 60.0%
! ACCGGCGGTTGATACATCCG+TGG + chr6_4:19651020-19651039 Msa0980950:intron 60.0%
TATCAACCGCCGGTGAAGGG+TGG - chr6_4:19651026-19651045 Msa0980960:intron 60.0%
GGAGAGGGAACTGAGTCCGA+TGG + chr6_4:19651782-19651801 Msa0980950:intron 60.0%
! TTGTCTGGTGGGTCTGGTGG+TGG + chr6_4:19651806-19651825 Msa0980950:intron 60.0%
! TCGTTGTCTGGTGGGTCTGG+TGG + chr6_4:19651809-19651828 Msa0980950:intron 60.0%
CCAGGCTTCTTGCTGGCCAT+GGG - chr6_4:19652060-19652079 Msa0980960:CDS 60.0%
! TGATGCGGCGGTTTTGCTGG+CGG + chr6_4:19653945-19653964 Msa0980950:intron 60.0%
! CTGTGATGCGGCGGTTTTGC+TGG + chr6_4:19653948-19653967 Msa0980950:intron 60.0%
ATGTGACGGCTGTGATGCGG+CGG + chr6_4:19653957-19653976 Msa0980950:intron 60.0%
CTCAATGGGATCCAGGAGGG+TGG - chr6_4:19654072-19654091 Msa0980960:CDS 60.0%
GAGGTGGAGGAGACTGATGC+AGG - chr6_4:19654170-19654189 Msa0980960:CDS 60.0%
GTGGAGGAGACTGATGCAGG+AGG - chr6_4:19654173-19654192 Msa0980960:CDS 60.0%
! GTGACGCAGTACGGAAGCGT+AGG + chr6_4:19654505-19654524 Msa0980950:intron 60.0%
GCTTCCGTACTGCGTCACAC+AGG - chr6_4:19654507-19654526 Msa0980960:CDS 60.0%
GGACGTCCCGGAAAGCAAGC+AGG - chr6_4:19650788-19650807 Msa0980960:intron 65.0%
!! TCTGGTGGGTCTGGTGGTGG+CGG + chr6_4:19651803-19651822 Msa0980950:intron 65.0%
! GATGGAGTGTCCATCCGGCC+AGG - chr6_4:19652042-19652061 Msa0980960:CDS 65.0%
CAGCAAGAAGCCTGGCCGGA+TGG + chr6_4:19652055-19652074 Msa0980950:intron 65.0%
CATCCGGCCAGGCTTCTTGC+TGG - chr6_4:19652053-19652072 Msa0980960:CDS 65.0%
TGGCCAGCAAGAAGCCTGGC+CGG + chr6_4:19652059-19652078 Msa0980950:intron 65.0%
GCCAGGCTTCTTGCTGGCCA+TGG - chr6_4:19652059-19652078 Msa0980960:CDS 65.0%
CCCATGGCCAGCAAGAAGCC+TGG + chr6_4:19652063-19652082 Msa0980950:intron 65.0%
!! GGGTCTGGTGGTGGCGGAGA+GGG + chr6_4:19651797-19651816 Msa0980950:intron 70.0%
!! TGGGTCTGGTGGTGGCGGAG+AGG + chr6_4:19651798-19651817 Msa0980950:intron 70.0%
! CTTGCTGGCCATGGGTGCCG+TGG - chr6_4:19652068-19652087 Msa0980960:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 19650729 19655201 19650729 ID=Msa0980960;Name=Msa0980960
chr6_4 mRNA 19650729 19655201 19650729 ID=Msa0980960-mRNA-1;Parent=Msa0980960;Name=Msa0980960-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|0.5|1|1|2|0|1097
chr6_4 exon 19651935 19655201 19651935 ID=Msa0980960-mRNA-1:exon:6140;Parent=Msa0980960-mRNA-1
chr6_4 exon 19650729 19650755 19650729 ID=Msa0980960-mRNA-1:exon:6139;Parent=Msa0980960-mRNA-1
chr6_4 CDS 19651935 19655201 19651935 ID=Msa0980960-mRNA-1:cds;Parent=Msa0980960-mRNA-1
chr6_4 CDS 19650729 19650755 19650729 ID=Msa0980960-mRNA-1:cds;Parent=Msa0980960-mRNA-1
Gene Sequence

>Msa0980960

ATGGATGTAGAAGAATTTTTGGATTGGGAGATTGATGTTGACAGATTTTTCGACGTCATGGACGTCCCGGAAAGCAAGCAGGTTAAGATGGTTGCGAACAGACTGAAAAGTACCGCATCTGTTTGGTGGGATAGACTCGTTGTTCAGAGACAGAGACAAAGAAAGAACCCTATTCGAACTTGGAGAAGGATGAAGCAGTTGATGCATGAAAGATTTAACTCTCGCGGTAGATTGTCTCTCTCGCCGCTTGTTTCAATTGAAAAATTGGAGAGGAAGCAACTCTCGTCGCCACGGATGTATCAACCGCCGGTGAAGGGTGGATATACTGAAGAGGCGGATCATATCATTAATGAAGCCGATTTTCATAATTCAACATACTTGTTATCAATGGAGACAACACAAAATGAATCATATGCTCATCAAACCGAGAACGATGTAATTGGTTGCTCTTTGCAAAATAATGGGAAGCATATTGGTGTAGATTTGCATCATGAGGCTAGTGACTGTGTTCTGGCTGAAGTGGATGACAAAAGAGAGGAACAAAAGCATTTGAAACGAACAGATCAAGAAAACTTGATACTTAATGATCATTGCTTGGCATCAGATAATTGTGGTAGTCCTGATCCTACACTTTATGGTGATGAGGATAACACACTTTTGGAATTGTCTGGTGAAGTTGTATCAGATGATGCATATGCTCGGAAAGGTTATATATCCGATTCAGTTGAGGCTGAGTTGCATATTCAAGGAACAAGTCTGATCAATCGAAAGGGTGAAAGTTCAGACTGTGATTGGGATGGTATAATTCCCAATTCTGCTAATATGTTAATTGAAGCAGAAGCTTTTAATGGTCTGGTGCAAAAACCATCGGGCTCTCCTATACAACTTCAGCAAGGAATTTCTCAACAAATAGATGAACTGAATGCCGGTTCAATTCATGATGTACAACCTTTAATGAAACTGGAGTTTTTCCCTAAAGAATGTGTCGCAACCAAGGAGGTAGCAACGGAAGAATCACCTTGTCGAAATTTCGAACTTTTTGGGACAGATCCATCGGACTCAGTTCCCTCTCCGCCACCACCAGACCCACCAGACAACGATGATTGTTTGAAAGAAGAGAAGGAACCACTTGCTACCGCAAATCAACAAACAAATCCGAAGAAAGATTCATTCACAACATCTTTTGATGACTTGTCATTGATTTTTGGTGCTTACCAGTCATCTAAATTCGAGGAAGTGCAAGGTAACAATTATCATGACGACAACAATCCTGCAGTTTCGCTAAGTTCGTCGTCGTCGATTTCCTTCCTAGTGATGGAGTGTCCATCCGGCCAGGCTTCTTGCTGGCCATGGGTGCCGTGGAATATTGTTTGTTATAGAGGTGTATTAAAGGTTGATTTAATTGCGGCGCGAATAAGTCCATTGAGCATAAAAATAGATGTGCACAGAGACCTTCCTGATCTTTCTGCAGATGTTATATCAAGGACTGTTTTTAGCAGCAGTTTTGAAGAGGGCAAACATATTTTCAAATTACAAGAGCGGCAGATGCATCTTTTCTCACAAGCAGTCGGAAGTGTCCATATCCCTGGATTTAGCTATTTGTCAACTAAGAAGAACAAAGATAGGTGGAGACTAGATAAACAGACACGTGAATCAATTTGCAAACTGATTGAAACCAAGAGGAGTGTTAAAGAAAATACAAAAAATGTACTAAATTCATTAATGAGTTTCTACAAGAATGAAGTTGGTGGCGAAGATAGACTACAGCTGGATGAAATTATTGATGAATGTAAAACCTACTTTGCTGGAAAAGATACAACATCTAACCTGTTAACTTTGGCACTTCTTCTATTAGCAAAATATCAAGAATGGCAAAGTAAGACACGTGAAGAAATTGATGGGAGTACTAGAGAAGCAATTGAAAAGAGGGTTAATCAATTAGGCATTGACAAGGCTGTACCGAAAAAGATTCTTGAACTGATGAATGTTGAAAATCTGACATGGGTGAAGGCGGCCAGCCGTCTCCAAAAGTATAGACTCTACCTAAAAAGAGTTAGTTGTGTGGAAAACAAACAAGGTCATATGGCAGCAGCCTTAACTAGTAGTTCAGATGCATCCTATTTAAGAAGTGGAGTTGGACGACATTTGCATACATTGAATCGCTCTACTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACTACCTGGAACAAACACTTATCTTCCAAGAGAATCTATTAACCGTGCTGTTATTAAGGAGAGTTCGTTAAAGACCATACCGGCTGGAATTTCAGATGGAGTATTCAATGTAGTACCTGGATTTGGTGCAACTGCAGGAACTGGTAAGGTTAGCTTTACTGGTTCAACAAGACGTGAAATAATGGTATCTGCAGCTAGAAGTAATTTGAAACCAGCTTCACTTGAATTAGGAGGAAAATCACCCCTCTTAATTTTTTATAATGCTGATGTTGATAAAGCTGCTAAACTTGCTCTCATTAGCATCGTATTTAACAAGGGAGAAATTTGTGTTGCGGGTTTTCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTAGTGGACAAAGCAAGAGCTTGGGCTGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGTCCTCAGGTTGACAAGAGGCAATTTAAAAAAATTATTTCATATATTGAGCATGGAAAGAAAGATGTAGCAACTCTTTCGACAGGTAGTAAAAAAATTGGAGACAAGAGTTACTACAATGAGCCTACAATTTTCTCCAATGTTAAGGAGGCCATGCGTACAACACAACTTGTCATGGAACTCATGAAGTTCAATACTATTGAGGAAGCAATCAAAAGTGTCAACAATAAAAGATATGACTTAGCAGCAGTAACTGTGACAAAGAATTTGGATATAGCAAGCACTGTATCAAGGTCCATTCGAACAGGAGTTATTTGGATTAATTGCTACTTTGCCTTTGGAAATGACATTCTCTATGGAGGTTACAAGATGAGTGGGTTTGGAAGAGATTGTGGATTGGTTGTTGATCAAGTATACACATGGTCATTTATGACTTCTCTTGATATGGAAGGTTTATCAATTTCTATCATGAAGGCTGATCCGTCTATTCTTCAACGATTAGATGCTGAAACTAAAACTCCTTATTGGCCTGTTAGAGTTAGTGGTAATCGACCGCCAGCAAAACCGCCGCATCACAGCCGTCACATTGAACTCAAGGAATTGCATCAAAATTCAGCAAGAGAAGTTAATTAA
Protein sequence

>Msa0980960

MDVEEFLDWEIDVDRFFDVMDVPESKQVKMVANRLKSTASVWWDRLVVQRQRQRKNPIRTWRRMKQLMHERFNSRGRLSLSPLVSIEKLERKQLSSPRMYQPPVKGGYTEEADHIINEADFHNSTYLLSMETTQNESYAHQTENDVIGCSLQNNGKHIGVDLHHEASDCVLAEVDDKREEQKHLKRTDQENLILNDHCLASDNCGSPDPTLYGDEDNTLLELSGEVVSDDAYARKGYISDSVEAELHIQGTSLINRKGESSDCDWDGIIPNSANMLIEAEAFNGLVQKPSGSPIQLQQGISQQIDELNAGSIHDVQPLMKLEFFPKECVATKEVATEESPCRNFELFGTDPSDSVPSPPPPDPPDNDDCLKEEKEPLATANQQTNPKKDSFTTSFDDLSLIFGAYQSSKFEEVQGNNYHDDNNPAVSLSSSSSISFLVMECPSGQASCWPWVPWNIVCYRGVLKVDLIAARISPLSIKIDVHRDLPDLSADVISRTVFSSSFEEGKHIFKLQERQMHLFSQAVGSVHIPGFSYLSTKKNKDRWRLDKQTRESICKLIETKRSVKENTKNVLNSLMSFYKNEVGGEDRLQLDEIIDECKTYFAGKDTTSNLLTLALLLLAKYQEWQSKTREEIDGSTREAIEKRVNQLGIDKAVPKKILELMNVENLTWVKAASRLQKYRLYLKRVSCVENKQGHMAAALTSSSDASYLRSGVGRHLHTLNRSTLLENRRCNGIWSSTMQLPGTNTYLPRESINRAVIKESSLKTIPAGISDGVFNVVPGFGATAGTGKVSFTGSTRREIMVSAARSNLKPASLELGGKSPLLIFYNADVDKAAKLALISIVFNKGEICVAGFRVFVQEGIYDEFEKKLVDKARAWAVGDPFDPKVQQGPQVDKRQFKKIISYIEHGKKDVATLSTGSKKIGDKSYYNEPTIFSNVKEAMRTTQLVMELMKFNTIEEAIKSVNNKRYDLAAVTVTKNLDIASTVSRSIRTGVIWINCYFAFGNDILYGGYKMSGFGRDCGLVVDQVYTWSFMTSLDMEGLSISIMKADPSILQRLDAETKTPYWPVRVSGNRPPAKPPHHSRHIELKELHQNSAREVN*