Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983990 | RHN78369.1 | 91.529 | 484 | 41 | 0 | 1 | 484 | 18 | 501 | 0.0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983990 | sp|Q336N8|JM706_ORYSJ | 51.983 | 479 | 225 | 3 | 9 | 484 | 84 | 560 | 1.02e-174 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983990 | A0A396JJG9 | 91.529 | 484 | 41 | 0 | 1 | 484 | 18 | 501 | 0.0 | 899 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0983990 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983990 | MtrunA17_Chr1g0164731 | 91.529 | 484 | 41 | 0 | 1 | 484 | 18 | 501 | 0.0 | 899 |
| Msa0983990 | MtrunA17_Chr1g0164761 | 77.106 | 463 | 87 | 2 | 22 | 484 | 2 | 445 | 0.0 | 736 |
| Msa0983990 | MtrunA17_Chr5g0410721 | 56.000 | 475 | 208 | 1 | 10 | 484 | 71 | 544 | 0.0 | 569 |
| Msa0983990 | MtrunA17_Chr3g0116441 | 35.784 | 408 | 220 | 9 | 13 | 393 | 3 | 395 | 3.44e-68 | 237 |
| Msa0983990 | MtrunA17_Chr8g0380981 | 35.917 | 387 | 175 | 8 | 24 | 345 | 39 | 417 | 1.75e-54 | 196 |
| Msa0983990 | MtrunA17_Chr1g0189211 | 29.554 | 538 | 288 | 16 | 24 | 483 | 146 | 670 | 4.03e-53 | 193 |
| Msa0983990 | MtrunA17_Chr1g0199511 | 45.745 | 188 | 98 | 1 | 172 | 359 | 291 | 474 | 9.94e-52 | 189 |
| Msa0983990 | MtrunA17_Chr7g0214951 | 72.500 | 120 | 15 | 2 | 201 | 319 | 99 | 201 | 7.49e-51 | 172 |
| Msa0983990 | MtrunA17_Chr5g0397501 | 33.416 | 404 | 222 | 13 | 107 | 484 | 302 | 684 | 4.23e-50 | 184 |
| Msa0983990 | MtrunA17_Chr2g0303101 | 34.152 | 407 | 183 | 12 | 24 | 359 | 48 | 440 | 9.05e-50 | 183 |
| Msa0983990 | MtrunA17_Chr7g0261401 | 29.808 | 312 | 202 | 7 | 176 | 476 | 338 | 643 | 1.70e-30 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983990 | AT5G46910.2 | 54.244 | 483 | 220 | 1 | 2 | 484 | 77 | 558 | 0.0 | 561 |
| Msa0983990 | AT5G46910.1 | 54.244 | 483 | 220 | 1 | 2 | 484 | 77 | 558 | 0.0 | 561 |
| Msa0983990 | AT3G48430.1 | 34.026 | 385 | 212 | 7 | 12 | 359 | 4 | 383 | 7.86e-60 | 213 |
| Msa0983990 | AT2G34880.1 | 31.579 | 532 | 273 | 16 | 25 | 483 | 58 | 571 | 8.12e-60 | 210 |
| Msa0983990 | AT1G30810.3 | 30.150 | 534 | 287 | 12 | 24 | 483 | 55 | 576 | 4.97e-56 | 200 |
| Msa0983990 | AT1G30810.2 | 30.150 | 534 | 287 | 12 | 24 | 483 | 55 | 576 | 4.97e-56 | 200 |
| Msa0983990 | AT1G30810.1 | 30.150 | 534 | 287 | 12 | 24 | 483 | 55 | 576 | 4.97e-56 | 200 |
| Msa0983990 | AT1G63490.1 | 41.328 | 271 | 133 | 6 | 107 | 360 | 46 | 307 | 3.55e-55 | 199 |
| Msa0983990 | AT1G08620.3 | 30.902 | 521 | 262 | 16 | 25 | 460 | 157 | 664 | 4.67e-55 | 199 |
| Msa0983990 | AT1G63490.2 | 41.697 | 271 | 132 | 7 | 107 | 360 | 299 | 560 | 5.10e-55 | 199 |
| Msa0983990 | AT1G63490.4 | 41.697 | 271 | 132 | 7 | 107 | 360 | 299 | 560 | 5.25e-55 | 199 |
| Msa0983990 | AT1G08620.2 | 30.902 | 521 | 262 | 16 | 25 | 460 | 143 | 650 | 6.82e-55 | 198 |
| Msa0983990 | AT1G08620.4 | 30.902 | 521 | 262 | 16 | 25 | 460 | 143 | 650 | 6.82e-55 | 198 |
| Msa0983990 | AT1G08620.1 | 30.902 | 521 | 262 | 16 | 25 | 460 | 143 | 650 | 6.82e-55 | 198 |
| Msa0983990 | AT4G20400.1 | 28.709 | 519 | 276 | 14 | 24 | 463 | 52 | 555 | 1.80e-52 | 191 |
| Msa0983990 | AT5G04240.1 | 46.809 | 188 | 96 | 1 | 172 | 359 | 259 | 442 | 4.76e-52 | 190 |
| Msa0983990 | AT4G20400.2 | 28.598 | 528 | 282 | 15 | 36 | 483 | 7 | 519 | 2.75e-49 | 181 |
| Msa0983990 | AT2G38950.1 | 27.789 | 493 | 285 | 18 | 22 | 460 | 102 | 577 | 9.19e-37 | 144 |
| Msa0983990 | AT1G63490.3 | 52.874 | 87 | 41 | 0 | 274 | 360 | 15 | 101 | 8.57e-24 | 105 |
Find 83 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTTGGATGATCTAAAT+TGG | 0.212573 | 6_4:-27622423 | Msa0983990:CDS |
| TGTCTTAATGAAAGAGAAAA+AGG | 0.242054 | 6_4:-27622109 | Msa0983990:CDS |
| AATCCAGCATGATATGAATT+TGG | 0.261244 | 6_4:+27620915 | None:intergenic |
| AAACAATTGTACAACCTCTT+AGG | 0.278337 | 6_4:-27622074 | Msa0983990:CDS |
| TGCAAAATTGTTTCTCCAAT+TGG | 0.295134 | 6_4:-27622153 | Msa0983990:CDS |
| GCTCCCGAGGCTTCTAAATA+TGG | 0.295796 | 6_4:-27622319 | Msa0983990:intron |
| TTCTGAACTGCAAAATCTAT+TGG | 0.303788 | 6_4:+27621860 | None:intergenic |
| CAAATCGAATGAACTTGATT+TGG | 0.304291 | 6_4:-27622437 | Msa0983990:CDS |
| AGTTCCTCATATGGAATTAT+AGG | 0.316333 | 6_4:+27620652 | None:intergenic |
| GAGAAGGGAACAGTTGAGTA+TGG | 0.324983 | 6_4:-27621783 | Msa0983990:CDS |
| AGATCTTCAAATACATCATT+AGG | 0.331595 | 6_4:-27620463 | Msa0983990:CDS |
| CGATAAGAAGCCGAGTCTTC+GGG | 0.334652 | 6_4:+27620568 | None:intergenic |
| TTTGTGATTGGTTTCCATTT+GGG | 0.338236 | 6_4:-27620714 | Msa0983990:CDS |
| ATTTGTGATTGGTTTCCATT+TGG | 0.338839 | 6_4:-27620715 | Msa0983990:CDS |
| TTACAAAGAAGTTCCTCATA+TGG | 0.344918 | 6_4:+27620643 | None:intergenic |
| GGATGGTAAACTGGACATTC+TGG | 0.345953 | 6_4:+27622388 | None:intergenic |
| TTACCATGGAAAAGGCAAAT+TGG | 0.347643 | 6_4:+27620367 | None:intergenic |
| TGTTCTGATGGATGGTAAAC+TGG | 0.349116 | 6_4:+27622379 | None:intergenic |
| ACGATAAGAAGCCGAGTCTT+CGG | 0.354055 | 6_4:+27620567 | None:intergenic |
| TATATCCATCTCATTCCATT+TGG | 0.359513 | 6_4:+27622047 | None:intergenic |
| CTCGTTCCAAGTTTGTCATC+AGG | 0.367879 | 6_4:+27621726 | None:intergenic |
| GACAAACTCAGCAGAATTAG+AGG | 0.367979 | 6_4:+27622128 | None:intergenic |
| TAAACTTTGCTATTTGTGAT+TGG | 0.381553 | 6_4:-27620726 | Msa0983990:CDS |
| CTTGTTACAACATGATGTTC+CGG | 0.394142 | 6_4:-27620982 | Msa0983990:CDS |
| AACGAGCAAATTGAATTTGA+AGG | 0.422359 | 6_4:-27621709 | Msa0983990:intron |
| ACAAGAATTTGAGCATCCTT+TGG | 0.422698 | 6_4:-27622359 | Msa0983990:CDS |
| TCATGTTGTAACAAGACATT+AGG | 0.439737 | 6_4:+27620990 | None:intergenic |
| TGCTCAAATTCTTGTTCTGA+TGG | 0.458499 | 6_4:+27622367 | None:intergenic |
| GCTACCTATAATTCCATATG+AGG | 0.458631 | 6_4:-27620656 | Msa0983990:CDS |
| CTGATCCTATGCTTTACATT+GGG | 0.461409 | 6_4:-27621322 | Msa0983990:CDS |
| ACTGTCTTAAATCATGTGTA+TGG | 0.461645 | 6_4:-27621086 | Msa0983990:CDS |
| TTTCTTGCTGCATCCCCAAA+TGG | 0.465026 | 6_4:+27620700 | None:intergenic |
| ACATGATGTTCCGGTTTACA+AGG | 0.469206 | 6_4:-27620973 | Msa0983990:CDS |
| TTCCATTTGGAAAGCCTAAG+AGG | 0.471534 | 6_4:+27622060 | None:intergenic |
| CTTCTTATCGTGCTATTGTA+CGG | 0.477848 | 6_4:-27620555 | Msa0983990:CDS |
| TACAAGGCGGTGCAAAAGCC+AGG | 0.481676 | 6_4:-27620957 | Msa0983990:CDS |
| GCAGAATTAGAGGCACCAAT+TGG | 0.481782 | 6_4:+27622138 | None:intergenic |
| AACCTCTTAGGCTTTCCAAA+TGG | 0.483332 | 6_4:-27622062 | Msa0983990:CDS |
| ACTGATCCTATGCTTTACAT+TGG | 0.488180 | 6_4:-27621323 | Msa0983990:CDS |
| ATTTGAGGCTGTTGCAAACA+AGG | 0.488264 | 6_4:-27621889 | Msa0983990:CDS |
| TTGAAGATCACTATTTGTAC+AGG | 0.488775 | 6_4:-27621271 | Msa0983990:intron |
| TTTCCAAATTCATATCATGC+TGG | 0.496493 | 6_4:-27620918 | Msa0983990:CDS |
| ATTTACATATCAAGAATTTG+AGG | 0.498743 | 6_4:-27621904 | Msa0983990:CDS |
| TGACATGCAGCCTCTGCCAT+AGG | 0.501176 | 6_4:-27620435 | Msa0983990:CDS |
| GGTGCAAATAAAACTTGGTA+TGG | 0.503293 | 6_4:-27621143 | Msa0983990:CDS |
| CAAATTCTTGTTCTGATGGA+TGG | 0.515818 | 6_4:+27622371 | None:intergenic |
| TGCTATTCAGTATGTTTGCA+TGG | 0.518171 | 6_4:-27621298 | Msa0983990:CDS |
| TTGTGATTGGTTTCCATTTG+GGG | 0.521261 | 6_4:-27620713 | Msa0983990:CDS |
| TTAGAAGAACATGGAGAGAA+TGG | 0.523633 | 6_4:-27621053 | Msa0983990:CDS |
| TTACCTTCCTCTCTTAGAGA+AGG | 0.529901 | 6_4:+27622020 | None:intergenic |
| TGTTGTAACAAGACATTAGG+AGG | 0.534027 | 6_4:+27620993 | None:intergenic |
| CCTCTGTCAACTAAACGTAA+TGG | 0.536420 | 6_4:+27621437 | None:intergenic |
| ACTCAGGTGCAAATAAAACT+TGG | 0.537060 | 6_4:-27621148 | Msa0983990:CDS |
| GAAATGATACATGGAGAGAA+GGG | 0.538499 | 6_4:-27621798 | Msa0983990:CDS |
| CAGAAGCAAACCCGAAGACT+CGG | 0.545114 | 6_4:-27620578 | Msa0983990:CDS |
| AATTGAGAGTCTGCAGAGCT+AGG | 0.546207 | 6_4:+27621116 | None:intergenic |
| TGAAATGATACATGGAGAGA+AGG | 0.549346 | 6_4:-27621799 | Msa0983990:CDS |
| AAGCTACATAACAATCCCTA+TGG | 0.550057 | 6_4:+27620419 | None:intergenic |
| GAGTATGGAGTCAACATTGA+GGG | 0.553863 | 6_4:-27621768 | Msa0983990:CDS |
| ATGGAAAAGGCAAATTGGAT+AGG | 0.554570 | 6_4:+27620372 | None:intergenic |
| TGTGATCCTGATGACAAACT+TGG | 0.555148 | 6_4:-27621732 | Msa0983990:CDS |
| GACATGCAGCCTCTGCCATA+GGG | 0.557662 | 6_4:-27620434 | Msa0983990:CDS |
| GCTTTCCAAATGGAATGAGA+TGG | 0.557790 | 6_4:-27622052 | Msa0983990:CDS |
| TAACCTTCTCTAAGAGAGGA+AGG | 0.559927 | 6_4:-27622023 | Msa0983990:intron |
| ATACCATATTTAGAAGCCTC+GGG | 0.566769 | 6_4:+27622316 | None:intergenic |
| CAAGACATTAGGAGGGAACA+TGG | 0.568622 | 6_4:+27621001 | None:intergenic |
| CATACCATATTTAGAAGCCT+CGG | 0.570675 | 6_4:+27622315 | None:intergenic |
| AAGGTTATGACAAACTCTCC+TGG | 0.572293 | 6_4:+27620939 | None:intergenic |
| TTCTGGCATGAAATGATACA+TGG | 0.578282 | 6_4:-27621807 | Msa0983990:CDS |
| ATAATAACCTTCTCTAAGAG+AGG | 0.584975 | 6_4:-27622027 | Msa0983990:CDS |
| CATAACAATCCCTATGGCAG+AGG | 0.587190 | 6_4:+27620425 | None:intergenic |
| TCTACAGAAAATTGCTCCCG+AGG | 0.589922 | 6_4:-27622332 | Msa0983990:CDS |
| ATGTATCATTTCATGCCAGA+AGG | 0.592357 | 6_4:+27621809 | None:intergenic |
| AGCATGATATGAATTTGGAA+AGG | 0.606277 | 6_4:+27620920 | None:intergenic |
| CCATTACGTTTAGTTGACAG+AGG | 0.607075 | 6_4:-27621437 | Msa0983990:CDS |
| TATCATGCTGGATTCAGTCA+TGG | 0.618286 | 6_4:-27620906 | Msa0983990:intron |
| AGCATCCCAATGTAAAGCAT+AGG | 0.618659 | 6_4:+27621317 | None:intergenic |
| AGCATAAATTACCATCACTC+AGG | 0.628951 | 6_4:-27621164 | Msa0983990:CDS |
| TGAGTATGGAGTCAACATTG+AGG | 0.665976 | 6_4:-27621769 | Msa0983990:CDS |
| AACAAAGTCTTAGAAGAACA+TGG | 0.671008 | 6_4:-27621062 | Msa0983990:CDS |
| TGATGTTCCGGTTTACAAGG+CGG | 0.676766 | 6_4:-27620970 | Msa0983990:CDS |
| GTTGTAACAAGACATTAGGA+GGG | 0.697642 | 6_4:+27620994 | None:intergenic |
| ACTAAACGTAATGGAGACTG+CGG | 0.718204 | 6_4:+27621446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTCTGTTTTATAATTTT+AGG | - | chr6_4:27621298-27621317 | Msa0983990:CDS | 10.0% |
| !!! | AATTCTGTTTTATAATTTTA+GGG | - | chr6_4:27621299-27621318 | Msa0983990:CDS | 10.0% |
| !!! | TAATTCTGTTTTATAATTTT+AGG | - | chr6_4:27621298-27621317 | Msa0983990:CDS | 10.0% |
| !!! | AATTCTGTTTTATAATTTTA+GGG | - | chr6_4:27621299-27621318 | Msa0983990:CDS | 10.0% |
| !!! | TAGTATATGTTTTTTTTTTC+AGG | - | chr6_4:27620469-27620488 | Msa0983990:CDS | 15.0% |
| !!! | AGTTTATTTTTTCATCATTT+AGG | + | chr6_4:27620693-27620712 | None:intergenic | 15.0% |
| !! | GATGAAAAAATAAACTAATT+TGG | - | chr6_4:27620697-27620716 | Msa0983990:CDS | 15.0% |
| !!! | TTTCATTTGATTTTAGAATT+TGG | - | chr6_4:27621172-27621191 | Msa0983990:intron | 15.0% |
| !!! | TAGTATATGTTTTTTTTTTC+AGG | - | chr6_4:27620469-27620488 | Msa0983990:CDS | 15.0% |
| !!! | AGTTTATTTTTTCATCATTT+AGG | + | chr6_4:27620693-27620712 | None:intergenic | 15.0% |
| !! | GATGAAAAAATAAACTAATT+TGG | - | chr6_4:27620697-27620716 | Msa0983990:CDS | 15.0% |
| !!! | TTTCATTTGATTTTAGAATT+TGG | - | chr6_4:27621172-27621191 | Msa0983990:intron | 15.0% |
| !! | ATTTACATATCAAGAATTTG+AGG | - | chr6_4:27620745-27620764 | Msa0983990:CDS | 20.0% |
| !! | AAAAAGATGTTAATAGAGAA+AGG | + | chr6_4:27621014-27621033 | None:intergenic | 20.0% |
| !! | GTAATAACTTAATCAATACT+AGG | + | chr6_4:27621266-27621285 | None:intergenic | 20.0% |
| !! | ATTTACATATCAAGAATTTG+AGG | - | chr6_4:27620745-27620764 | Msa0983990:CDS | 20.0% |
| !! | AAAAAGATGTTAATAGAGAA+AGG | + | chr6_4:27621014-27621033 | None:intergenic | 20.0% |
| !! | GTAATAACTTAATCAATACT+AGG | + | chr6_4:27621266-27621285 | None:intergenic | 20.0% |
| !!! | TTGATTTGGATGATCTAAAT+TGG | - | chr6_4:27620226-27620245 | Msa0983990:CDS | 25.0% |
| !! | ATTTTCTGTAGATAAACCAA+AGG | + | chr6_4:27620309-27620328 | None:intergenic | 25.0% |
| ! | TGTCTTAATGAAAGAGAAAA+AGG | - | chr6_4:27620540-27620559 | Msa0983990:CDS | 25.0% |
| !! | TGAAGATTTTCAGAATCATT+TGG | + | chr6_4:27621065-27621084 | None:intergenic | 25.0% |
| ! | TGTTGTAATATTCTTCTGTA+AGG | - | chr6_4:27621127-27621146 | Msa0983990:CDS | 25.0% |
| ! | GTTGTAATATTCTTCTGTAA+GGG | - | chr6_4:27621128-27621147 | Msa0983990:CDS | 25.0% |
| !! | ATTCATTTTCTTGTGAGTTT+AGG | - | chr6_4:27621880-27621899 | Msa0983990:CDS | 25.0% |
| !!! | TAAACTTTGCTATTTGTGAT+TGG | - | chr6_4:27621923-27621942 | Msa0983990:intron | 25.0% |
| ! | AGATCTTCAAATACATCATT+AGG | - | chr6_4:27622186-27622205 | Msa0983990:intron | 25.0% |
| ! | AATTCTCAAATAGACTAATG+AGG | + | chr6_4:27622310-27622329 | None:intergenic | 25.0% |
| !!! | TTGATTTGGATGATCTAAAT+TGG | - | chr6_4:27620226-27620245 | Msa0983990:CDS | 25.0% |
| !! | ATTTTCTGTAGATAAACCAA+AGG | + | chr6_4:27620309-27620328 | None:intergenic | 25.0% |
| ! | TGTCTTAATGAAAGAGAAAA+AGG | - | chr6_4:27620540-27620559 | Msa0983990:CDS | 25.0% |
| !! | TGAAGATTTTCAGAATCATT+TGG | + | chr6_4:27621065-27621084 | None:intergenic | 25.0% |
| ! | TGTTGTAATATTCTTCTGTA+AGG | - | chr6_4:27621127-27621146 | Msa0983990:CDS | 25.0% |
| ! | GTTGTAATATTCTTCTGTAA+GGG | - | chr6_4:27621128-27621147 | Msa0983990:CDS | 25.0% |
| !! | ATTCATTTTCTTGTGAGTTT+AGG | - | chr6_4:27621880-27621899 | Msa0983990:CDS | 25.0% |
| !!! | TAAACTTTGCTATTTGTGAT+TGG | - | chr6_4:27621923-27621942 | Msa0983990:intron | 25.0% |
| ! | AGATCTTCAAATACATCATT+AGG | - | chr6_4:27622186-27622205 | Msa0983990:intron | 25.0% |
| ! | AATTCTCAAATAGACTAATG+AGG | + | chr6_4:27622310-27622329 | None:intergenic | 25.0% |
| CAAATCGAATGAACTTGATT+TGG | - | chr6_4:27620212-27620231 | Msa0983990:CDS | 30.0% | |
| ! | TGCAAAATTGTTTCTCCAAT+TGG | - | chr6_4:27620496-27620515 | Msa0983990:CDS | 30.0% |
| AAACAATTGTACAACCTCTT+AGG | - | chr6_4:27620575-27620594 | Msa0983990:CDS | 30.0% | |
| TATATCCATCTCATTCCATT+TGG | + | chr6_4:27620605-27620624 | None:intergenic | 30.0% | |
| ! | ATAATAACCTTCTCTAAGAG+AGG | - | chr6_4:27620622-27620641 | Msa0983990:CDS | 30.0% |
| TTCTGAACTGCAAAATCTAT+TGG | + | chr6_4:27620792-27620811 | None:intergenic | 30.0% | |
| AACGAGCAAATTGAATTTGA+AGG | - | chr6_4:27620940-27620959 | Msa0983990:CDS | 30.0% | |
| !!! | TTTGATTTTAGAATTTGGCG+CGG | - | chr6_4:27621177-27621196 | Msa0983990:intron | 30.0% |
| TCAATACTAGGTTCCAAAAA+TGG | + | chr6_4:27621254-27621273 | None:intergenic | 30.0% | |
| TTGAAGATCACTATTTGTAC+AGG | - | chr6_4:27621378-27621397 | Msa0983990:intron | 30.0% | |
| ACTGTCTTAAATCATGTGTA+TGG | - | chr6_4:27621563-27621582 | Msa0983990:intron | 30.0% | |
| AACAAAGTCTTAGAAGAACA+TGG | - | chr6_4:27621587-27621606 | Msa0983990:intron | 30.0% | |
| !!! | TTGTTTTTTGAGCAAGCAAT+TGG | + | chr6_4:27621628-27621647 | None:intergenic | 30.0% |
| TCATGTTGTAACAAGACATT+AGG | + | chr6_4:27621662-27621681 | None:intergenic | 30.0% | |
| AGCATGATATGAATTTGGAA+AGG | + | chr6_4:27621732-27621751 | None:intergenic | 30.0% | |
| TTTCCAAATTCATATCATGC+TGG | - | chr6_4:27621731-27621750 | Msa0983990:CDS | 30.0% | |
| AATCCAGCATGATATGAATT+TGG | + | chr6_4:27621737-27621756 | None:intergenic | 30.0% | |
| TGGTGTGATTATGTTTATGT+TGG | - | chr6_4:27621800-27621819 | Msa0983990:CDS | 30.0% | |
| ! | TTTCGATTTTGCACTAGATA+GGG | + | chr6_4:27621842-27621861 | None:intergenic | 30.0% |
| !! | ATTTGTGATTGGTTTCCATT+TGG | - | chr6_4:27621934-27621953 | Msa0983990:intron | 30.0% |
| !! | TTTGTGATTGGTTTCCATTT+GGG | - | chr6_4:27621935-27621954 | Msa0983990:intron | 30.0% |
| AGTTCCTCATATGGAATTAT+AGG | + | chr6_4:27622000-27622019 | None:intergenic | 30.0% | |
| TTACAAAGAAGTTCCTCATA+TGG | + | chr6_4:27622009-27622028 | None:intergenic | 30.0% | |
| ! | TTCCAAAAACTTGCTTATGT+CGG | - | chr6_4:27622394-27622413 | Msa0983990:CDS | 30.0% |
| CAAATCGAATGAACTTGATT+TGG | - | chr6_4:27620212-27620231 | Msa0983990:CDS | 30.0% | |
| ! | TGCAAAATTGTTTCTCCAAT+TGG | - | chr6_4:27620496-27620515 | Msa0983990:CDS | 30.0% |
| AAACAATTGTACAACCTCTT+AGG | - | chr6_4:27620575-27620594 | Msa0983990:CDS | 30.0% | |
| TATATCCATCTCATTCCATT+TGG | + | chr6_4:27620605-27620624 | None:intergenic | 30.0% | |
| ! | ATAATAACCTTCTCTAAGAG+AGG | - | chr6_4:27620622-27620641 | Msa0983990:CDS | 30.0% |
| TTCTGAACTGCAAAATCTAT+TGG | + | chr6_4:27620792-27620811 | None:intergenic | 30.0% | |
| AACGAGCAAATTGAATTTGA+AGG | - | chr6_4:27620940-27620959 | Msa0983990:CDS | 30.0% | |
| !!! | TTTGATTTTAGAATTTGGCG+CGG | - | chr6_4:27621177-27621196 | Msa0983990:intron | 30.0% |
| TCAATACTAGGTTCCAAAAA+TGG | + | chr6_4:27621254-27621273 | None:intergenic | 30.0% | |
| TTGAAGATCACTATTTGTAC+AGG | - | chr6_4:27621378-27621397 | Msa0983990:intron | 30.0% | |
| ACTGTCTTAAATCATGTGTA+TGG | - | chr6_4:27621563-27621582 | Msa0983990:intron | 30.0% | |
| AACAAAGTCTTAGAAGAACA+TGG | - | chr6_4:27621587-27621606 | Msa0983990:intron | 30.0% | |
| !!! | TTGTTTTTTGAGCAAGCAAT+TGG | + | chr6_4:27621628-27621647 | None:intergenic | 30.0% |
| TCATGTTGTAACAAGACATT+AGG | + | chr6_4:27621662-27621681 | None:intergenic | 30.0% | |
| AGCATGATATGAATTTGGAA+AGG | + | chr6_4:27621732-27621751 | None:intergenic | 30.0% | |
| TTTCCAAATTCATATCATGC+TGG | - | chr6_4:27621731-27621750 | Msa0983990:CDS | 30.0% | |
| AATCCAGCATGATATGAATT+TGG | + | chr6_4:27621737-27621756 | None:intergenic | 30.0% | |
| TGGTGTGATTATGTTTATGT+TGG | - | chr6_4:27621800-27621819 | Msa0983990:CDS | 30.0% | |
| ! | TTTCGATTTTGCACTAGATA+GGG | + | chr6_4:27621842-27621861 | None:intergenic | 30.0% |
| !! | ATTTGTGATTGGTTTCCATT+TGG | - | chr6_4:27621934-27621953 | Msa0983990:intron | 30.0% |
| !! | TTTGTGATTGGTTTCCATTT+GGG | - | chr6_4:27621935-27621954 | Msa0983990:intron | 30.0% |
| AGTTCCTCATATGGAATTAT+AGG | + | chr6_4:27622000-27622019 | None:intergenic | 30.0% | |
| TTACAAAGAAGTTCCTCATA+TGG | + | chr6_4:27622009-27622028 | None:intergenic | 30.0% | |
| ! | TTCCAAAAACTTGCTTATGT+CGG | - | chr6_4:27622394-27622413 | Msa0983990:CDS | 30.0% |
| CAAATTCTTGTTCTGATGGA+TGG | + | chr6_4:27620281-27620300 | None:intergenic | 35.0% | |
| TGCTCAAATTCTTGTTCTGA+TGG | + | chr6_4:27620285-27620304 | None:intergenic | 35.0% | |
| ACAAGAATTTGAGCATCCTT+TGG | - | chr6_4:27620290-27620309 | Msa0983990:intron | 35.0% | |
| ATACCATATTTAGAAGCCTC+GGG | + | chr6_4:27620336-27620355 | None:intergenic | 35.0% | |
| CATACCATATTTAGAAGCCT+CGG | + | chr6_4:27620337-27620356 | None:intergenic | 35.0% | |
| TAGATATCGAAAAAGCCTTC+TGG | - | chr6_4:27620825-27620844 | Msa0983990:intron | 35.0% | |
| ATGTATCATTTCATGCCAGA+AGG | + | chr6_4:27620843-27620862 | None:intergenic | 35.0% | |
| TTCTGGCATGAAATGATACA+TGG | - | chr6_4:27620842-27620861 | Msa0983990:intron | 35.0% | |
| TGAAATGATACATGGAGAGA+AGG | - | chr6_4:27620850-27620869 | Msa0983990:intron | 35.0% | |
| GAAATGATACATGGAGAGAA+GGG | - | chr6_4:27620851-27620870 | Msa0983990:intron | 35.0% | |
| TAGAGAAAGGAAACACAGAA+CGG | + | chr6_4:27621001-27621020 | None:intergenic | 35.0% | |
| ACTGATCCTATGCTTTACAT+TGG | - | chr6_4:27621326-27621345 | Msa0983990:CDS | 35.0% | |
| CTGATCCTATGCTTTACATT+GGG | - | chr6_4:27621327-27621346 | Msa0983990:CDS | 35.0% | |
| TGCTATTCAGTATGTTTGCA+TGG | - | chr6_4:27621351-27621370 | Msa0983990:intron | 35.0% | |
| AGCATAAATTACCATCACTC+AGG | - | chr6_4:27621485-27621504 | Msa0983990:intron | 35.0% | |
| !! | TTTTATTTGCACCTGAGTGA+TGG | + | chr6_4:27621499-27621518 | None:intergenic | 35.0% |
| ACTCAGGTGCAAATAAAACT+TGG | - | chr6_4:27621501-27621520 | Msa0983990:intron | 35.0% | |
| GGTGCAAATAAAACTTGGTA+TGG | - | chr6_4:27621506-27621525 | Msa0983990:intron | 35.0% | |
| TTAGAAGAACATGGAGAGAA+TGG | - | chr6_4:27621596-27621615 | Msa0983990:intron | 35.0% | |
| GTTGTAACAAGACATTAGGA+GGG | + | chr6_4:27621658-27621677 | None:intergenic | 35.0% | |
| TGTTGTAACAAGACATTAGG+AGG | + | chr6_4:27621659-27621678 | None:intergenic | 35.0% | |
| CTTGTTACAACATGATGTTC+CGG | - | chr6_4:27621667-27621686 | Msa0983990:intron | 35.0% | |
| ! | ATTTTGCACTAGATAGGGAT+AGG | + | chr6_4:27621837-27621856 | None:intergenic | 35.0% |
| ! | CTTTCGATTTTGCACTAGAT+AGG | + | chr6_4:27621843-27621862 | None:intergenic | 35.0% |
| !!! | GTGAGTTTAGGTTTTAACTG+TGG | - | chr6_4:27621892-27621911 | Msa0983990:CDS | 35.0% |
| !! | TTGTGATTGGTTTCCATTTG+GGG | - | chr6_4:27621936-27621955 | Msa0983990:intron | 35.0% |
| GCTACCTATAATTCCATATG+AGG | - | chr6_4:27621993-27622012 | Msa0983990:intron | 35.0% | |
| ! | CTTCTTATCGTGCTATTGTA+CGG | - | chr6_4:27622094-27622113 | Msa0983990:CDS | 35.0% |
| AAGCTACATAACAATCCCTA+TGG | + | chr6_4:27622233-27622252 | None:intergenic | 35.0% | |
| ATGGAAAAGGCAAATTGGAT+AGG | + | chr6_4:27622280-27622299 | None:intergenic | 35.0% | |
| ! | TATCCAATTTGCCTTTTCCA+TGG | - | chr6_4:27622279-27622298 | Msa0983990:intron | 35.0% |
| TTACCATGGAAAAGGCAAAT+TGG | + | chr6_4:27622285-27622304 | None:intergenic | 35.0% | |
| ! | ATGAGGTTTTACCATGGAAA+AGG | + | chr6_4:27622293-27622312 | None:intergenic | 35.0% |
| ! | AGACTAATGAGGTTTTACCA+TGG | + | chr6_4:27622299-27622318 | None:intergenic | 35.0% |
| ! | TCCAAAAACTTGCTTATGTC+GGG | - | chr6_4:27622395-27622414 | Msa0983990:CDS | 35.0% |
| CAAATTCTTGTTCTGATGGA+TGG | + | chr6_4:27620281-27620300 | None:intergenic | 35.0% | |
| TGCTCAAATTCTTGTTCTGA+TGG | + | chr6_4:27620285-27620304 | None:intergenic | 35.0% | |
| ACAAGAATTTGAGCATCCTT+TGG | - | chr6_4:27620290-27620309 | Msa0983990:intron | 35.0% | |
| ATACCATATTTAGAAGCCTC+GGG | + | chr6_4:27620336-27620355 | None:intergenic | 35.0% | |
| CATACCATATTTAGAAGCCT+CGG | + | chr6_4:27620337-27620356 | None:intergenic | 35.0% | |
| TAGATATCGAAAAAGCCTTC+TGG | - | chr6_4:27620825-27620844 | Msa0983990:intron | 35.0% | |
| ATGTATCATTTCATGCCAGA+AGG | + | chr6_4:27620843-27620862 | None:intergenic | 35.0% | |
| TTCTGGCATGAAATGATACA+TGG | - | chr6_4:27620842-27620861 | Msa0983990:intron | 35.0% | |
| TGAAATGATACATGGAGAGA+AGG | - | chr6_4:27620850-27620869 | Msa0983990:intron | 35.0% | |
| GAAATGATACATGGAGAGAA+GGG | - | chr6_4:27620851-27620870 | Msa0983990:intron | 35.0% | |
| TAGAGAAAGGAAACACAGAA+CGG | + | chr6_4:27621001-27621020 | None:intergenic | 35.0% | |
| ACTGATCCTATGCTTTACAT+TGG | - | chr6_4:27621326-27621345 | Msa0983990:CDS | 35.0% | |
| CTGATCCTATGCTTTACATT+GGG | - | chr6_4:27621327-27621346 | Msa0983990:CDS | 35.0% | |
| TGCTATTCAGTATGTTTGCA+TGG | - | chr6_4:27621351-27621370 | Msa0983990:intron | 35.0% | |
| AGCATAAATTACCATCACTC+AGG | - | chr6_4:27621485-27621504 | Msa0983990:intron | 35.0% | |
| !! | TTTTATTTGCACCTGAGTGA+TGG | + | chr6_4:27621499-27621518 | None:intergenic | 35.0% |
| ACTCAGGTGCAAATAAAACT+TGG | - | chr6_4:27621501-27621520 | Msa0983990:intron | 35.0% | |
| GGTGCAAATAAAACTTGGTA+TGG | - | chr6_4:27621506-27621525 | Msa0983990:intron | 35.0% | |
| TTAGAAGAACATGGAGAGAA+TGG | - | chr6_4:27621596-27621615 | Msa0983990:intron | 35.0% | |
| GTTGTAACAAGACATTAGGA+GGG | + | chr6_4:27621658-27621677 | None:intergenic | 35.0% | |
| TGTTGTAACAAGACATTAGG+AGG | + | chr6_4:27621659-27621678 | None:intergenic | 35.0% | |
| CTTGTTACAACATGATGTTC+CGG | - | chr6_4:27621667-27621686 | Msa0983990:intron | 35.0% | |
| ! | ATTTTGCACTAGATAGGGAT+AGG | + | chr6_4:27621837-27621856 | None:intergenic | 35.0% |
| ! | CTTTCGATTTTGCACTAGAT+AGG | + | chr6_4:27621843-27621862 | None:intergenic | 35.0% |
| !!! | GTGAGTTTAGGTTTTAACTG+TGG | - | chr6_4:27621892-27621911 | Msa0983990:CDS | 35.0% |
| !! | TTGTGATTGGTTTCCATTTG+GGG | - | chr6_4:27621936-27621955 | Msa0983990:intron | 35.0% |
| GCTACCTATAATTCCATATG+AGG | - | chr6_4:27621993-27622012 | Msa0983990:intron | 35.0% | |
| ! | CTTCTTATCGTGCTATTGTA+CGG | - | chr6_4:27622094-27622113 | Msa0983990:CDS | 35.0% |
| AAGCTACATAACAATCCCTA+TGG | + | chr6_4:27622233-27622252 | None:intergenic | 35.0% | |
| ATGGAAAAGGCAAATTGGAT+AGG | + | chr6_4:27622280-27622299 | None:intergenic | 35.0% | |
| ! | TATCCAATTTGCCTTTTCCA+TGG | - | chr6_4:27622279-27622298 | Msa0983990:intron | 35.0% |
| TTACCATGGAAAAGGCAAAT+TGG | + | chr6_4:27622285-27622304 | None:intergenic | 35.0% | |
| ! | ATGAGGTTTTACCATGGAAA+AGG | + | chr6_4:27622293-27622312 | None:intergenic | 35.0% |
| ! | AGACTAATGAGGTTTTACCA+TGG | + | chr6_4:27622299-27622318 | None:intergenic | 35.0% |
| ! | TCCAAAAACTTGCTTATGTC+GGG | - | chr6_4:27622395-27622414 | Msa0983990:CDS | 35.0% |
| ! | TGTTCTGATGGATGGTAAAC+TGG | + | chr6_4:27620273-27620292 | None:intergenic | 40.0% |
| GACAAACTCAGCAGAATTAG+AGG | + | chr6_4:27620524-27620543 | None:intergenic | 40.0% | |
| AACCTCTTAGGCTTTCCAAA+TGG | - | chr6_4:27620587-27620606 | Msa0983990:CDS | 40.0% | |
| TTCCATTTGGAAAGCCTAAG+AGG | + | chr6_4:27620592-27620611 | None:intergenic | 40.0% | |
| GCTTTCCAAATGGAATGAGA+TGG | - | chr6_4:27620597-27620616 | Msa0983990:CDS | 40.0% | |
| ! | TAACCTTCTCTAAGAGAGGA+AGG | - | chr6_4:27620626-27620645 | Msa0983990:CDS | 40.0% |
| TTACCTTCCTCTCTTAGAGA+AGG | + | chr6_4:27620632-27620651 | None:intergenic | 40.0% | |
| ! | ATTTGAGGCTGTTGCAAACA+AGG | - | chr6_4:27620760-27620779 | Msa0983990:intron | 40.0% |
| TGAGTATGGAGTCAACATTG+AGG | - | chr6_4:27620880-27620899 | Msa0983990:intron | 40.0% | |
| GAGTATGGAGTCAACATTGA+GGG | - | chr6_4:27620881-27620900 | Msa0983990:intron | 40.0% | |
| TGTGATCCTGATGACAAACT+TGG | - | chr6_4:27620917-27620936 | Msa0983990:CDS | 40.0% | |
| ! | ACTAAACGTAATGGAGACTG+CGG | + | chr6_4:27621206-27621225 | None:intergenic | 40.0% |
| CCTCTGTCAACTAAACGTAA+TGG | + | chr6_4:27621215-27621234 | None:intergenic | 40.0% | |
| CCATTACGTTTAGTTGACAG+AGG | - | chr6_4:27621212-27621231 | Msa0983990:intron | 40.0% | |
| TTGACAGAGGAATTCCTGTA+AGG | - | chr6_4:27621225-27621244 | Msa0983990:intron | 40.0% | |
| !! | TCCTGTAAGGAAGCCATTTT+TGG | - | chr6_4:27621238-27621257 | Msa0983990:intron | 40.0% |
| TCCAAAAATGGCTTCCTTAC+AGG | + | chr6_4:27621242-27621261 | None:intergenic | 40.0% | |
| AGCATCCCAATGTAAAGCAT+AGG | + | chr6_4:27621335-27621354 | None:intergenic | 40.0% | |
| ACATGATGTTCCGGTTTACA+AGG | - | chr6_4:27621676-27621695 | Msa0983990:intron | 40.0% | |
| AAGGTTATGACAAACTCTCC+TGG | + | chr6_4:27621713-27621732 | None:intergenic | 40.0% | |
| TATCATGCTGGATTCAGTCA+TGG | - | chr6_4:27621743-27621762 | Msa0983990:CDS | 40.0% | |
| ! | TCTGCAACTTCTGACTTTTG+AGG | + | chr6_4:27622055-27622074 | None:intergenic | 40.0% |
| ! | CCAAAAACTTGCTTATGTCG+GGG | - | chr6_4:27622396-27622415 | Msa0983990:CDS | 40.0% |
| ! | TGTTCTGATGGATGGTAAAC+TGG | + | chr6_4:27620273-27620292 | None:intergenic | 40.0% |
| GACAAACTCAGCAGAATTAG+AGG | + | chr6_4:27620524-27620543 | None:intergenic | 40.0% | |
| AACCTCTTAGGCTTTCCAAA+TGG | - | chr6_4:27620587-27620606 | Msa0983990:CDS | 40.0% | |
| TTCCATTTGGAAAGCCTAAG+AGG | + | chr6_4:27620592-27620611 | None:intergenic | 40.0% | |
| GCTTTCCAAATGGAATGAGA+TGG | - | chr6_4:27620597-27620616 | Msa0983990:CDS | 40.0% | |
| ! | TAACCTTCTCTAAGAGAGGA+AGG | - | chr6_4:27620626-27620645 | Msa0983990:CDS | 40.0% |
| TTACCTTCCTCTCTTAGAGA+AGG | + | chr6_4:27620632-27620651 | None:intergenic | 40.0% | |
| ! | ATTTGAGGCTGTTGCAAACA+AGG | - | chr6_4:27620760-27620779 | Msa0983990:intron | 40.0% |
| TGAGTATGGAGTCAACATTG+AGG | - | chr6_4:27620880-27620899 | Msa0983990:intron | 40.0% | |
| GAGTATGGAGTCAACATTGA+GGG | - | chr6_4:27620881-27620900 | Msa0983990:intron | 40.0% | |
| TGTGATCCTGATGACAAACT+TGG | - | chr6_4:27620917-27620936 | Msa0983990:CDS | 40.0% | |
| ! | ACTAAACGTAATGGAGACTG+CGG | + | chr6_4:27621206-27621225 | None:intergenic | 40.0% |
| CCTCTGTCAACTAAACGTAA+TGG | + | chr6_4:27621215-27621234 | None:intergenic | 40.0% | |
| CCATTACGTTTAGTTGACAG+AGG | - | chr6_4:27621212-27621231 | Msa0983990:intron | 40.0% | |
| TTGACAGAGGAATTCCTGTA+AGG | - | chr6_4:27621225-27621244 | Msa0983990:intron | 40.0% | |
| !! | TCCTGTAAGGAAGCCATTTT+TGG | - | chr6_4:27621238-27621257 | Msa0983990:intron | 40.0% |
| TCCAAAAATGGCTTCCTTAC+AGG | + | chr6_4:27621242-27621261 | None:intergenic | 40.0% | |
| AGCATCCCAATGTAAAGCAT+AGG | + | chr6_4:27621335-27621354 | None:intergenic | 40.0% | |
| ACATGATGTTCCGGTTTACA+AGG | - | chr6_4:27621676-27621695 | Msa0983990:intron | 40.0% | |
| AAGGTTATGACAAACTCTCC+TGG | + | chr6_4:27621713-27621732 | None:intergenic | 40.0% | |
| TATCATGCTGGATTCAGTCA+TGG | - | chr6_4:27621743-27621762 | Msa0983990:CDS | 40.0% | |
| ! | TCTGCAACTTCTGACTTTTG+AGG | + | chr6_4:27622055-27622074 | None:intergenic | 40.0% |
| ! | CCAAAAACTTGCTTATGTCG+GGG | - | chr6_4:27622396-27622415 | Msa0983990:CDS | 40.0% |
| GGATGGTAAACTGGACATTC+TGG | + | chr6_4:27620264-27620283 | None:intergenic | 45.0% | |
| TCTACAGAAAATTGCTCCCG+AGG | - | chr6_4:27620317-27620336 | Msa0983990:intron | 45.0% | |
| ! | TTACGCATGCGCAGAGTTTT+AGG | + | chr6_4:27620432-27620451 | None:intergenic | 45.0% |
| !! | GCAGAATTAGAGGCACCAAT+TGG | + | chr6_4:27620514-27620533 | None:intergenic | 45.0% |
| GAGAAGGGAACAGTTGAGTA+TGG | - | chr6_4:27620866-27620885 | Msa0983990:intron | 45.0% | |
| CTCGTTCCAAGTTTGTCATC+AGG | + | chr6_4:27620926-27620945 | None:intergenic | 45.0% | |
| AATTGAGAGTCTGCAGAGCT+AGG | + | chr6_4:27621536-27621555 | None:intergenic | 45.0% | |
| CAAGACATTAGGAGGGAACA+TGG | + | chr6_4:27621651-27621670 | None:intergenic | 45.0% | |
| TGATGTTCCGGTTTACAAGG+CGG | - | chr6_4:27621679-27621698 | Msa0983990:intron | 45.0% | |
| ! | TTTTGCACCGCCTTGTAAAC+CGG | + | chr6_4:27621689-27621708 | None:intergenic | 45.0% |
| AACACATGTACAGAGAGAGG+GGG | + | chr6_4:27621781-27621800 | None:intergenic | 45.0% | |
| CAACACATGTACAGAGAGAG+GGG | + | chr6_4:27621782-27621801 | None:intergenic | 45.0% | |
| CCAACACATGTACAGAGAGA+GGG | + | chr6_4:27621783-27621802 | None:intergenic | 45.0% | |
| ACCAACACATGTACAGAGAG+AGG | + | chr6_4:27621784-27621803 | None:intergenic | 45.0% | |
| TTTCTTGCTGCATCCCCAAA+TGG | + | chr6_4:27621952-27621971 | None:intergenic | 45.0% | |
| ACGATAAGAAGCCGAGTCTT+CGG | + | chr6_4:27622085-27622104 | None:intergenic | 45.0% | |
| CATAACAATCCCTATGGCAG+AGG | + | chr6_4:27622227-27622246 | None:intergenic | 45.0% | |
| ! | CCCCGACATAAGCAAGTTTT+TGG | + | chr6_4:27622399-27622418 | None:intergenic | 45.0% |
| GGATGGTAAACTGGACATTC+TGG | + | chr6_4:27620264-27620283 | None:intergenic | 45.0% | |
| TCTACAGAAAATTGCTCCCG+AGG | - | chr6_4:27620317-27620336 | Msa0983990:intron | 45.0% | |
| ! | TTACGCATGCGCAGAGTTTT+AGG | + | chr6_4:27620432-27620451 | None:intergenic | 45.0% |
| !! | GCAGAATTAGAGGCACCAAT+TGG | + | chr6_4:27620514-27620533 | None:intergenic | 45.0% |
| GAGAAGGGAACAGTTGAGTA+TGG | - | chr6_4:27620866-27620885 | Msa0983990:intron | 45.0% | |
| CTCGTTCCAAGTTTGTCATC+AGG | + | chr6_4:27620926-27620945 | None:intergenic | 45.0% | |
| AATTGAGAGTCTGCAGAGCT+AGG | + | chr6_4:27621536-27621555 | None:intergenic | 45.0% | |
| CAAGACATTAGGAGGGAACA+TGG | + | chr6_4:27621651-27621670 | None:intergenic | 45.0% | |
| TGATGTTCCGGTTTACAAGG+CGG | - | chr6_4:27621679-27621698 | Msa0983990:intron | 45.0% | |
| ! | TTTTGCACCGCCTTGTAAAC+CGG | + | chr6_4:27621689-27621708 | None:intergenic | 45.0% |
| AACACATGTACAGAGAGAGG+GGG | + | chr6_4:27621781-27621800 | None:intergenic | 45.0% | |
| CAACACATGTACAGAGAGAG+GGG | + | chr6_4:27621782-27621801 | None:intergenic | 45.0% | |
| CCAACACATGTACAGAGAGA+GGG | + | chr6_4:27621783-27621802 | None:intergenic | 45.0% | |
| ACCAACACATGTACAGAGAG+AGG | + | chr6_4:27621784-27621803 | None:intergenic | 45.0% | |
| TTTCTTGCTGCATCCCCAAA+TGG | + | chr6_4:27621952-27621971 | None:intergenic | 45.0% | |
| ACGATAAGAAGCCGAGTCTT+CGG | + | chr6_4:27622085-27622104 | None:intergenic | 45.0% | |
| CATAACAATCCCTATGGCAG+AGG | + | chr6_4:27622227-27622246 | None:intergenic | 45.0% | |
| ! | CCCCGACATAAGCAAGTTTT+TGG | + | chr6_4:27622399-27622418 | None:intergenic | 45.0% |
| GCTCCCGAGGCTTCTAAATA+TGG | - | chr6_4:27620330-27620349 | Msa0983990:intron | 50.0% | |
| CCCTCTCTCTGTACATGTGT+TGG | - | chr6_4:27621780-27621799 | Msa0983990:CDS | 50.0% | |
| CAGAAGCAAACCCGAAGACT+CGG | - | chr6_4:27622071-27622090 | Msa0983990:CDS | 50.0% | |
| CGATAAGAAGCCGAGTCTTC+GGG | + | chr6_4:27622084-27622103 | None:intergenic | 50.0% | |
| GCTCCCGAGGCTTCTAAATA+TGG | - | chr6_4:27620330-27620349 | Msa0983990:intron | 50.0% | |
| CCCTCTCTCTGTACATGTGT+TGG | - | chr6_4:27621780-27621799 | Msa0983990:CDS | 50.0% | |
| CAGAAGCAAACCCGAAGACT+CGG | - | chr6_4:27622071-27622090 | Msa0983990:CDS | 50.0% | |
| CGATAAGAAGCCGAGTCTTC+GGG | + | chr6_4:27622084-27622103 | None:intergenic | 50.0% | |
| TACAAGGCGGTGCAAAAGCC+AGG | - | chr6_4:27621692-27621711 | Msa0983990:intron | 55.0% | |
| TGACATGCAGCCTCTGCCAT+AGG | - | chr6_4:27622214-27622233 | Msa0983990:intron | 55.0% | |
| GACATGCAGCCTCTGCCATA+GGG | - | chr6_4:27622215-27622234 | Msa0983990:intron | 55.0% | |
| TACAAGGCGGTGCAAAAGCC+AGG | - | chr6_4:27621692-27621711 | Msa0983990:intron | 55.0% | |
| TGACATGCAGCCTCTGCCAT+AGG | - | chr6_4:27622214-27622233 | Msa0983990:intron | 55.0% | |
| GACATGCAGCCTCTGCCATA+GGG | - | chr6_4:27622215-27622234 | Msa0983990:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 27620186 | 27622485 | 27620186 | ID=Msa0983990;Name=Msa0983990 |
| chr6_4 | mRNA | 27620186 | 27622485 | 27620186 | ID=Msa0983990-mRNA-1;Parent=Msa0983990;Name=Msa0983990-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|8|0|484 |
| chr6_4 | exon | 27622320 | 27622485 | 27622320 | ID=Msa0983990-mRNA-1:exon:7816;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27622024 | 27622180 | 27622024 | ID=Msa0983990-mRNA-1:exon:7815;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27621710 | 27621929 | 27621710 | ID=Msa0983990-mRNA-1:exon:7814;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27621430 | 27621483 | 27621430 | ID=Msa0983990-mRNA-1:exon:7813;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27621272 | 27621351 | 27621272 | ID=Msa0983990-mRNA-1:exon:7812;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27620907 | 27621184 | 27620907 | ID=Msa0983990-mRNA-1:exon:7811;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27620371 | 27620769 | 27620371 | ID=Msa0983990-mRNA-1:exon:7810;Parent=Msa0983990-mRNA-1 |
| chr6_4 | exon | 27620186 | 27620283 | 27620186 | ID=Msa0983990-mRNA-1:exon:7809;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27622320 | 27622485 | 27622320 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27622024 | 27622180 | 27622024 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27621710 | 27621929 | 27621710 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27621430 | 27621483 | 27621430 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27621272 | 27621351 | 27621272 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27620907 | 27621184 | 27620907 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27620371 | 27620769 | 27620371 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| chr6_4 | CDS | 27620186 | 27620283 | 27620186 | ID=Msa0983990-mRNA-1:cds;Parent=Msa0983990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
