Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0986230 | XP_024642171.1 | 83.186 | 113 | 5 | 1 | 165 | 263 | 1 | 113 | 6.80e-51 | 186 |
| Msa0986230 | XP_024642171.1 | 96.667 | 180 | 6 | 0 | 260 | 439 | 184 | 363 | 2.48e-120 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0986230 | sp|Q9SZL8|FRS5_ARATH | 36.283 | 113 | 58 | 1 | 161 | 259 | 429 | 541 | 1.30e-16 | 85.9 |
| Msa0986230 | sp|Q9SZL8|FRS5_ARATH | 35.032 | 157 | 83 | 4 | 31 | 169 | 67 | 222 | 1.51e-15 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0986230 | A0A6A5LMF3 | 46.135 | 414 | 178 | 13 | 27 | 434 | 12 | 386 | 2.38e-100 | 314 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0986230 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0986230 | MtrunA17_Chr5g0448761 | 39.823 | 113 | 54 | 2 | 161 | 259 | 420 | 532 | 3.82e-18 | 87.0 |
| Msa0986230 | MtrunA17_Chr5g0448761 | 36.957 | 138 | 71 | 3 | 27 | 151 | 53 | 187 | 4.32e-17 | 84.0 |
| Msa0986230 | MtrunA17_Chr1g0202341 | 34.167 | 120 | 65 | 1 | 158 | 263 | 401 | 520 | 1.02e-15 | 79.7 |
| Msa0986230 | MtrunA17_Chr1g0202341 | 29.586 | 169 | 103 | 5 | 1 | 157 | 17 | 181 | 7.43e-13 | 70.5 |
| Msa0986230 | MtrunA17_Chr5g0448511 | 36.207 | 116 | 60 | 1 | 158 | 259 | 189 | 304 | 3.09e-14 | 74.7 |
| Msa0986230 | MtrunA17_Chr7g0233911 | 38.053 | 113 | 57 | 5 | 30 | 131 | 28 | 138 | 6.90e-14 | 70.5 |
| Msa0986230 | MtrunA17_Chr5g0441581 | 31.387 | 137 | 80 | 1 | 137 | 259 | 349 | 485 | 1.82e-13 | 72.4 |
| Msa0986230 | MtrunA17_Chr7g0258861 | 30.328 | 122 | 74 | 3 | 33 | 144 | 6 | 126 | 9.19e-13 | 68.9 |
| Msa0986230 | MtrunA17_Chr1g0196541 | 38.202 | 89 | 41 | 1 | 159 | 233 | 343 | 431 | 1.29e-12 | 70.1 |
| Msa0986230 | MtrunA17_Chr4g0033611 | 32.258 | 155 | 89 | 6 | 22 | 167 | 61 | 208 | 1.87e-12 | 67.4 |
| Msa0986230 | MtrunA17_Chr1g0207551 | 34.021 | 97 | 61 | 1 | 171 | 264 | 406 | 502 | 4.58e-12 | 68.2 |
| Msa0986230 | MtrunA17_Chr3g0078041 | 32.215 | 149 | 85 | 5 | 31 | 168 | 44 | 187 | 7.30e-12 | 65.1 |
| Msa0986230 | MtrunA17_Chr2g0291591 | 31.148 | 122 | 74 | 4 | 35 | 149 | 62 | 180 | 1.10e-11 | 66.6 |
| Msa0986230 | MtrunA17_Chr2g0296781 | 37.931 | 87 | 40 | 1 | 161 | 233 | 345 | 431 | 2.05e-11 | 66.2 |
| Msa0986230 | MtrunA17_Chr6g0477261 | 37.931 | 87 | 40 | 1 | 161 | 233 | 234 | 320 | 2.58e-11 | 65.9 |
| Msa0986230 | MtrunA17_Chr6g0458391 | 31.788 | 151 | 88 | 6 | 33 | 170 | 221 | 369 | 7.80e-11 | 64.3 |
| Msa0986230 | MtrunA17_Chr3g0118611 | 31.452 | 124 | 68 | 3 | 151 | 259 | 287 | 408 | 7.84e-11 | 64.3 |
| Msa0986230 | MtrunA17_Chr2g0291581 | 31.356 | 118 | 67 | 1 | 161 | 264 | 409 | 526 | 8.30e-11 | 64.3 |
| Msa0986230 | MtrunA17_Chr3g0080351 | 30.973 | 113 | 64 | 1 | 161 | 259 | 419 | 531 | 9.68e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0986230 | AT4G38180.1 | 36.283 | 113 | 58 | 1 | 161 | 259 | 429 | 541 | 1.32e-17 | 85.9 |
| Msa0986230 | AT4G38180.1 | 35.032 | 157 | 83 | 4 | 31 | 169 | 67 | 222 | 1.54e-16 | 82.8 |
| Msa0986230 | AT4G15090.1 | 33.051 | 118 | 65 | 1 | 161 | 264 | 405 | 522 | 1.24e-15 | 79.7 |
| Msa0986230 | AT4G15090.5 | 33.051 | 118 | 65 | 1 | 161 | 264 | 405 | 522 | 1.24e-15 | 79.7 |
| Msa0986230 | AT4G15090.3 | 33.051 | 118 | 65 | 1 | 161 | 264 | 405 | 522 | 1.24e-15 | 79.7 |
| Msa0986230 | AT4G15090.2 | 33.051 | 118 | 65 | 1 | 161 | 264 | 405 | 522 | 1.24e-15 | 79.7 |
| Msa0986230 | AT4G15090.4 | 33.051 | 118 | 65 | 1 | 161 | 264 | 405 | 522 | 1.24e-15 | 79.7 |
| Msa0986230 | AT4G38170.1 | 32.759 | 116 | 64 | 1 | 158 | 259 | 191 | 306 | 2.82e-15 | 78.6 |
| Msa0986230 | AT2G27110.2 | 31.973 | 147 | 80 | 4 | 158 | 290 | 373 | 513 | 7.37e-12 | 68.2 |
| Msa0986230 | AT2G27110.1 | 31.973 | 147 | 80 | 4 | 158 | 290 | 373 | 513 | 7.37e-12 | 68.2 |
| Msa0986230 | AT2G27110.3 | 31.788 | 151 | 83 | 4 | 158 | 294 | 228 | 372 | 9.10e-12 | 67.8 |
| Msa0986230 | AT3G22170.2 | 28.814 | 118 | 70 | 1 | 161 | 264 | 414 | 531 | 1.06e-11 | 67.4 |
| Msa0986230 | AT3G22170.1 | 28.814 | 118 | 70 | 1 | 161 | 264 | 414 | 531 | 1.06e-11 | 67.4 |
| Msa0986230 | AT1G10240.2 | 32.824 | 131 | 74 | 4 | 34 | 150 | 45 | 175 | 4.34e-11 | 65.5 |
| Msa0986230 | AT1G10240.1 | 32.824 | 131 | 74 | 4 | 34 | 150 | 45 | 175 | 4.34e-11 | 65.5 |
| Msa0986230 | AT2G43280.1 | 32.061 | 131 | 76 | 5 | 19 | 137 | 4 | 133 | 4.71e-11 | 62.4 |
Find 56 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTCCGACAAGCAATTT+TGG | 0.188112 | 6_4:+34045354 | None:intergenic |
| TTTACAATTCATTTGCAAAA+AGG | 0.228560 | 6_4:-34047227 | Msa0986230:CDS |
| TGCATCCTTCTTAATATCTT+TGG | 0.239826 | 6_4:+34045548 | None:intergenic |
| AGCAAAGGTATTAGTTGATT+TGG | 0.254141 | 6_4:-34045513 | Msa0986230:CDS |
| GAGGTACATTAGAAGGAAAT+TGG | 0.278387 | 6_4:-34047023 | Msa0986230:CDS |
| GGAGTTTCTCCTTTGGAATC+TGG | 0.287253 | 6_4:-34045389 | Msa0986230:CDS |
| GGATTTCTAATAGTCAATTC+TGG | 0.312090 | 6_4:+34045323 | None:intergenic |
| ATTAAATAGTGAACCTTGTA+AGG | 0.338372 | 6_4:-34047286 | Msa0986230:CDS |
| CATACAAAGACAGCTCTCTT+TGG | 0.340587 | 6_4:+34047171 | None:intergenic |
| TTTAATTCGTCACCAACATT+AGG | 0.350028 | 6_4:+34047303 | None:intergenic |
| CAGTGATGGAGTTTCTCCTT+TGG | 0.356600 | 6_4:-34045396 | Msa0986230:CDS |
| TCCAACGCTGCAAAATAAAA+TGG | 0.360936 | 6_4:+34045639 | None:intergenic |
| TAGTTTGATTTGTGTCATCT+TGG | 0.378031 | 6_4:+34047100 | None:intergenic |
| GTCAAAAGAGGTACATTAGA+AGG | 0.419461 | 6_4:-34047030 | Msa0986230:CDS |
| GTCCGTACTCAATCATTAAT+CGG | 0.426232 | 6_4:+34046215 | None:intergenic |
| AAGTGTTCTACTTCTCGAAC+TGG | 0.426697 | 6_4:-34047072 | Msa0986230:CDS |
| CCACGCAATGCACAAACAAA+AGG | 0.435072 | 6_4:-34045302 | Msa0986230:CDS |
| GACAACAATGAATGGCTTCA+AGG | 0.439948 | 6_4:-34046190 | Msa0986230:CDS |
| AATTCATTATATCTGATTTG+AGG | 0.445916 | 6_4:-34045466 | Msa0986230:CDS |
| CGCTGCAAAATAAAATGGTC+AGG | 0.446582 | 6_4:+34045644 | None:intergenic |
| GGAATTCAAATCTGTGGAAA+AGG | 0.451124 | 6_4:-34047259 | Msa0986230:CDS |
| TGTCATGAGTGTGGTGAATC+TGG | 0.451337 | 6_4:-34045182 | Msa0986230:CDS |
| ATTTGTGTTGAAATTTGAAA+AGG | 0.454017 | 6_4:-34046029 | Msa0986230:CDS |
| TTGAATTCCATCCCCTTACA+AGG | 0.484462 | 6_4:+34047273 | None:intergenic |
| TTAGCTGCTGCTCCTAATGT+TGG | 0.490364 | 6_4:-34047315 | Msa0986230:CDS |
| AAAGAGAGGATTATGAAAGT+AGG | 0.500092 | 6_4:-34045979 | Msa0986230:CDS |
| ATTTGATTTCTTCATTGCAA+TGG | 0.501662 | 6_4:+34045427 | None:intergenic |
| GCCACACTTGTTGTCAAAAG+AGG | 0.505706 | 6_4:-34047042 | Msa0986230:CDS |
| CAAAATTGTAGATTCAAAAG+TGG | 0.511466 | 6_4:-34045251 | Msa0986230:CDS |
| GTCTTTGTATGTTGTAATGA+AGG | 0.517879 | 6_4:-34047159 | Msa0986230:intron |
| TGATTTGAGGCGCACTCGTA+TGG | 0.520232 | 6_4:-34045453 | Msa0986230:CDS |
| TAGTGAACCTTGTAAGGGGA+TGG | 0.531310 | 6_4:-34047280 | Msa0986230:CDS |
| CACGCAATGCACAAACAAAA+GGG | 0.538817 | 6_4:-34045301 | Msa0986230:CDS |
| TGTCAACCAAAATTGCTTGT+CGG | 0.544243 | 6_4:-34045360 | Msa0986230:CDS |
| CGGTGTCATAAAAGCATGAA+TGG | 0.550442 | 6_4:-34046934 | Msa0986230:CDS |
| TCAAATTTAGCTATCAGTGA+TGG | 0.553213 | 6_4:-34045410 | Msa0986230:CDS |
| TTAAATAGTGAACCTTGTAA+GGG | 0.561628 | 6_4:-34047285 | Msa0986230:CDS |
| GCACGCCAAAGATATTAAGA+AGG | 0.572798 | 6_4:-34045553 | Msa0986230:CDS |
| ACAACAATGAATGGCTTCAA+GGG | 0.573168 | 6_4:-34046189 | Msa0986230:intron |
| ACGGACTGGACAACAATGAA+TGG | 0.575271 | 6_4:-34046198 | Msa0986230:CDS |
| GTCTACAGGGTCAAAACTTG+AGG | 0.581238 | 6_4:-34045939 | Msa0986230:CDS |
| GGGGATGGAATTCAAATCTG+TGG | 0.582477 | 6_4:-34047265 | Msa0986230:CDS |
| TGTGTTGAAATTTGAAAAGG+CGG | 0.586171 | 6_4:-34046026 | Msa0986230:CDS |
| AGCCGATTAATGATTGAGTA+CGG | 0.595364 | 6_4:-34046217 | Msa0986230:CDS |
| ACAAACAAAAGGGAGAAAGA+AGG | 0.601052 | 6_4:-34045291 | Msa0986230:CDS |
| GCATGCTCAACAAGAAGCAA+AGG | 0.605686 | 6_4:-34045528 | Msa0986230:CDS |
| TTCCACATTTGTTGACTGTG+TGG | 0.606600 | 6_4:+34047356 | None:intergenic |
| ATTAATGATTGAGTACGGAC+TGG | 0.607432 | 6_4:-34046212 | Msa0986230:CDS |
| GTGCATTGGTCAATTATGGA+TGG | 0.620199 | 6_4:-34047396 | None:intergenic |
| AGCCACACAGTCAACAAATG+TGG | 0.622019 | 6_4:-34047358 | Msa0986230:CDS |
| ACAAAAGGGAGAAAGAAGGA+TGG | 0.625355 | 6_4:-34045287 | Msa0986230:CDS |
| TAAATAGTGAACCTTGTAAG+GGG | 0.625905 | 6_4:-34047284 | Msa0986230:CDS |
| CAACCAAAATTGCTTGTCGG+AGG | 0.633822 | 6_4:-34045357 | Msa0986230:CDS |
| GAATGATCATAACCATCCCA+TGG | 0.640152 | 6_4:-34046983 | Msa0986230:CDS |
| CTAAAAGTGTGTCTTATATG+CGG | 0.670716 | 6_4:-34046954 | Msa0986230:CDS |
| AGAAAAGCATGTCATGAGTG+TGG | 0.709074 | 6_4:-34045191 | Msa0986230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTATCAATCAATTTTATT+TGG | - | chr6_4:34045985-34046004 | Msa0986230:CDS | 15.0% |
| !! | TATATAAAATTAGAGAATCT+TGG | - | chr6_4:34046355-34046374 | Msa0986230:intron | 15.0% |
| !!! | CATTATCAATCAATTTTATT+TGG | - | chr6_4:34045985-34046004 | Msa0986230:CDS | 15.0% |
| !! | TATATAAAATTAGAGAATCT+TGG | - | chr6_4:34046355-34046374 | Msa0986230:intron | 15.0% |
| !! | TTTACAATTCATTTGCAAAA+AGG | - | chr6_4:34045293-34045312 | Msa0986230:CDS | 20.0% |
| !! | ATTTGTGTTGAAATTTGAAA+AGG | - | chr6_4:34046491-34046510 | Msa0986230:intron | 20.0% |
| !!! | ATTTATTCGAGAAACATTTT+TGG | - | chr6_4:34046618-34046637 | Msa0986230:intron | 20.0% |
| !!! | ATGTCAATTATATGAGTTTT+TGG | - | chr6_4:34046797-34046816 | Msa0986230:intron | 20.0% |
| !!! | TGTCAATTATATGAGTTTTT+GGG | - | chr6_4:34046798-34046817 | Msa0986230:intron | 20.0% |
| !!! | AATTCATTATATCTGATTTG+AGG | - | chr6_4:34047054-34047073 | Msa0986230:CDS | 20.0% |
| !! | TTTACAATTCATTTGCAAAA+AGG | - | chr6_4:34045293-34045312 | Msa0986230:CDS | 20.0% |
| !! | ATTTGTGTTGAAATTTGAAA+AGG | - | chr6_4:34046491-34046510 | Msa0986230:intron | 20.0% |
| !!! | ATTTATTCGAGAAACATTTT+TGG | - | chr6_4:34046618-34046637 | Msa0986230:intron | 20.0% |
| !!! | ATGTCAATTATATGAGTTTT+TGG | - | chr6_4:34046797-34046816 | Msa0986230:intron | 20.0% |
| !!! | TGTCAATTATATGAGTTTTT+GGG | - | chr6_4:34046798-34046817 | Msa0986230:intron | 20.0% |
| !!! | AATTCATTATATCTGATTTG+AGG | - | chr6_4:34047054-34047073 | Msa0986230:CDS | 20.0% |
| ! | ATTAAATAGTGAACCTTGTA+AGG | - | chr6_4:34045234-34045253 | Msa0986230:CDS | 25.0% |
| ! | TTAAATAGTGAACCTTGTAA+GGG | - | chr6_4:34045235-34045254 | Msa0986230:CDS | 25.0% |
| ! | AATTCATTTGCAAAAAGGAT+GGG | - | chr6_4:34045298-34045317 | Msa0986230:CDS | 25.0% |
| !! | AAGTCTTAGTGAACATTTTA+AGG | - | chr6_4:34045618-34045637 | Msa0986230:CDS | 25.0% |
| !!! | TCGGATGATAAACTTTTTTT+GGG | - | chr6_4:34045846-34045865 | Msa0986230:intron | 25.0% |
| ! | ATATTACATCTCCAAATTGT+TGG | + | chr6_4:34045897-34045916 | None:intergenic | 25.0% |
| !!! | ATACTTGTTAGTCTTATATG+TGG | + | chr6_4:34045929-34045948 | None:intergenic | 25.0% |
| ! | TGATTATTCAATCCAACAAA+CGG | + | chr6_4:34045967-34045986 | None:intergenic | 25.0% |
| !!! | GTTGTTTGAAACTTTTCTTA+AGG | - | chr6_4:34046050-34046069 | Msa0986230:CDS | 25.0% |
| ! | TCTTCAAAACTTTCTATACT+TGG | + | chr6_4:34046276-34046295 | None:intergenic | 25.0% |
| ! | AAACAGCTTCTATTATAAAC+TGG | + | chr6_4:34046384-34046403 | None:intergenic | 25.0% |
| ! | GTAAATTTCAAGATGAGATT+GGG | - | chr6_4:34046640-34046659 | Msa0986230:intron | 25.0% |
| ! | AAAAAGAAGATTAGCAAAGA+TGG | - | chr6_4:34046681-34046700 | Msa0986230:intron | 25.0% |
| !! | GTCAATTATATGAGTTTTTG+GGG | - | chr6_4:34046799-34046818 | Msa0986230:intron | 25.0% |
| !! | ATTTGATTTCTTCATTGCAA+TGG | + | chr6_4:34047096-34047115 | None:intergenic | 25.0% |
| ! | CAAAATTGTAGATTCAAAAG+TGG | - | chr6_4:34047269-34047288 | Msa0986230:CDS | 25.0% |
| ! | ATTAAATAGTGAACCTTGTA+AGG | - | chr6_4:34045234-34045253 | Msa0986230:CDS | 25.0% |
| ! | TTAAATAGTGAACCTTGTAA+GGG | - | chr6_4:34045235-34045254 | Msa0986230:CDS | 25.0% |
| ! | AATTCATTTGCAAAAAGGAT+GGG | - | chr6_4:34045298-34045317 | Msa0986230:CDS | 25.0% |
| !! | AAGTCTTAGTGAACATTTTA+AGG | - | chr6_4:34045618-34045637 | Msa0986230:CDS | 25.0% |
| !!! | TCGGATGATAAACTTTTTTT+GGG | - | chr6_4:34045846-34045865 | Msa0986230:intron | 25.0% |
| ! | ATATTACATCTCCAAATTGT+TGG | + | chr6_4:34045897-34045916 | None:intergenic | 25.0% |
| !!! | ATACTTGTTAGTCTTATATG+TGG | + | chr6_4:34045929-34045948 | None:intergenic | 25.0% |
| ! | TGATTATTCAATCCAACAAA+CGG | + | chr6_4:34045967-34045986 | None:intergenic | 25.0% |
| !!! | GTTGTTTGAAACTTTTCTTA+AGG | - | chr6_4:34046050-34046069 | Msa0986230:CDS | 25.0% |
| ! | TCTTCAAAACTTTCTATACT+TGG | + | chr6_4:34046276-34046295 | None:intergenic | 25.0% |
| ! | AAACAGCTTCTATTATAAAC+TGG | + | chr6_4:34046384-34046403 | None:intergenic | 25.0% |
| ! | GTAAATTTCAAGATGAGATT+GGG | - | chr6_4:34046640-34046659 | Msa0986230:intron | 25.0% |
| ! | AAAAAGAAGATTAGCAAAGA+TGG | - | chr6_4:34046681-34046700 | Msa0986230:intron | 25.0% |
| !! | GTCAATTATATGAGTTTTTG+GGG | - | chr6_4:34046799-34046818 | Msa0986230:intron | 25.0% |
| !! | ATTTGATTTCTTCATTGCAA+TGG | + | chr6_4:34047096-34047115 | None:intergenic | 25.0% |
| ! | CAAAATTGTAGATTCAAAAG+TGG | - | chr6_4:34047269-34047288 | Msa0986230:CDS | 25.0% |
| TTTAATTCGTCACCAACATT+AGG | + | chr6_4:34045220-34045239 | None:intergenic | 30.0% | |
| TAAATAGTGAACCTTGTAAG+GGG | - | chr6_4:34045236-34045255 | Msa0986230:CDS | 30.0% | |
| CAATTCATTTGCAAAAAGGA+TGG | - | chr6_4:34045297-34045316 | Msa0986230:CDS | 30.0% | |
| GTCTTTGTATGTTGTAATGA+AGG | - | chr6_4:34045361-34045380 | Msa0986230:CDS | 30.0% | |
| !! | TAGTTTGATTTGTGTCATCT+TGG | + | chr6_4:34045423-34045442 | None:intergenic | 30.0% |
| ! | GCATATAAGACACACTTTTA+GGG | + | chr6_4:34045567-34045586 | None:intergenic | 30.0% |
| ! | CTAAAAGTGTGTCTTATATG+CGG | - | chr6_4:34045566-34045585 | Msa0986230:CDS | 30.0% |
| !! | AGTGAACATTTTAAGGAAGA+AGG | - | chr6_4:34045625-34045644 | Msa0986230:CDS | 30.0% |
| CAATTATTGCAAACAGAAAC+AGG | - | chr6_4:34045777-34045796 | Msa0986230:intron | 30.0% | |
| !!! | CTCGGATGATAAACTTTTTT+TGG | - | chr6_4:34045845-34045864 | Msa0986230:intron | 30.0% |
| !! | AGATTAGCTTACCAACAATT+TGG | - | chr6_4:34045883-34045902 | Msa0986230:intron | 30.0% |
| ATTATTCAATCCAACAAACG+GGG | + | chr6_4:34045965-34045984 | None:intergenic | 30.0% | |
| GATTATTCAATCCAACAAAC+GGG | + | chr6_4:34045966-34045985 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTTAAGGCAA+TGG | - | chr6_4:34046056-34046075 | Msa0986230:CDS | 30.0% |
| !!! | TAGAAAGTTTTGAAGAAGAC+TGG | - | chr6_4:34046280-34046299 | Msa0986230:intron | 30.0% |
| !!! | AATAGAAGCTGTTTTTTTGC+TGG | - | chr6_4:34046390-34046409 | Msa0986230:intron | 30.0% |
| !!! | ATAGAAGCTGTTTTTTTGCT+GGG | - | chr6_4:34046391-34046410 | Msa0986230:intron | 30.0% |
| TGTGTTGAAATTTGAAAAGG+CGG | - | chr6_4:34046494-34046513 | Msa0986230:intron | 30.0% | |
| !!! | CTCTTTTTTCTACTTCTAAG+TGG | + | chr6_4:34046527-34046546 | None:intergenic | 30.0% |
| CTTAGAAGTAGAAAAAAGAG+AGG | - | chr6_4:34046527-34046546 | Msa0986230:intron | 30.0% | |
| AAAGAGAGGATTATGAAAGT+AGG | - | chr6_4:34046541-34046560 | Msa0986230:intron | 30.0% | |
| AAAAAACGCATATTGTCTAC+AGG | - | chr6_4:34046567-34046586 | Msa0986230:intron | 30.0% | |
| AAAAACGCATATTGTCTACA+GGG | - | chr6_4:34046568-34046587 | Msa0986230:intron | 30.0% | |
| GGTAAATTTCAAGATGAGAT+TGG | - | chr6_4:34046639-34046658 | Msa0986230:intron | 30.0% | |
| GAAACTTGATAGACATAGTT+AGG | + | chr6_4:34046708-34046727 | None:intergenic | 30.0% | |
| GTTTCTCGTTGATGTAAATT+TGG | - | chr6_4:34046752-34046771 | Msa0986230:intron | 30.0% | |
| !!! | CTGGTAATTTTTCAAGCAAA+AGG | - | chr6_4:34046840-34046859 | Msa0986230:intron | 30.0% |
| TGCATCCTTCTTAATATCTT+TGG | + | chr6_4:34046975-34046994 | None:intergenic | 30.0% | |
| !! | AGCAAAGGTATTAGTTGATT+TGG | - | chr6_4:34047007-34047026 | Msa0986230:CDS | 30.0% |
| TCAAATTTAGCTATCAGTGA+TGG | - | chr6_4:34047110-34047129 | Msa0986230:intron | 30.0% | |
| !!! | AGCAATTTTGGTTGACATTT+TGG | + | chr6_4:34047157-34047176 | None:intergenic | 30.0% |
| GGATTTCTAATAGTCAATTC+TGG | + | chr6_4:34047200-34047219 | None:intergenic | 30.0% | |
| TTTAATTCGTCACCAACATT+AGG | + | chr6_4:34045220-34045239 | None:intergenic | 30.0% | |
| TAAATAGTGAACCTTGTAAG+GGG | - | chr6_4:34045236-34045255 | Msa0986230:CDS | 30.0% | |
| CAATTCATTTGCAAAAAGGA+TGG | - | chr6_4:34045297-34045316 | Msa0986230:CDS | 30.0% | |
| GTCTTTGTATGTTGTAATGA+AGG | - | chr6_4:34045361-34045380 | Msa0986230:CDS | 30.0% | |
| !! | TAGTTTGATTTGTGTCATCT+TGG | + | chr6_4:34045423-34045442 | None:intergenic | 30.0% |
| ! | GCATATAAGACACACTTTTA+GGG | + | chr6_4:34045567-34045586 | None:intergenic | 30.0% |
| ! | CTAAAAGTGTGTCTTATATG+CGG | - | chr6_4:34045566-34045585 | Msa0986230:CDS | 30.0% |
| !! | AGTGAACATTTTAAGGAAGA+AGG | - | chr6_4:34045625-34045644 | Msa0986230:CDS | 30.0% |
| CAATTATTGCAAACAGAAAC+AGG | - | chr6_4:34045777-34045796 | Msa0986230:intron | 30.0% | |
| !!! | CTCGGATGATAAACTTTTTT+TGG | - | chr6_4:34045845-34045864 | Msa0986230:intron | 30.0% |
| !! | AGATTAGCTTACCAACAATT+TGG | - | chr6_4:34045883-34045902 | Msa0986230:intron | 30.0% |
| ATTATTCAATCCAACAAACG+GGG | + | chr6_4:34045965-34045984 | None:intergenic | 30.0% | |
| GATTATTCAATCCAACAAAC+GGG | + | chr6_4:34045966-34045985 | None:intergenic | 30.0% | |
| ! | TGAAACTTTTCTTAAGGCAA+TGG | - | chr6_4:34046056-34046075 | Msa0986230:CDS | 30.0% |
| !!! | TAGAAAGTTTTGAAGAAGAC+TGG | - | chr6_4:34046280-34046299 | Msa0986230:intron | 30.0% |
| !!! | AATAGAAGCTGTTTTTTTGC+TGG | - | chr6_4:34046390-34046409 | Msa0986230:intron | 30.0% |
| !!! | ATAGAAGCTGTTTTTTTGCT+GGG | - | chr6_4:34046391-34046410 | Msa0986230:intron | 30.0% |
| TGTGTTGAAATTTGAAAAGG+CGG | - | chr6_4:34046494-34046513 | Msa0986230:intron | 30.0% | |
| !!! | CTCTTTTTTCTACTTCTAAG+TGG | + | chr6_4:34046527-34046546 | None:intergenic | 30.0% |
| CTTAGAAGTAGAAAAAAGAG+AGG | - | chr6_4:34046527-34046546 | Msa0986230:intron | 30.0% | |
| AAAGAGAGGATTATGAAAGT+AGG | - | chr6_4:34046541-34046560 | Msa0986230:intron | 30.0% | |
| AAAAAACGCATATTGTCTAC+AGG | - | chr6_4:34046567-34046586 | Msa0986230:intron | 30.0% | |
| AAAAACGCATATTGTCTACA+GGG | - | chr6_4:34046568-34046587 | Msa0986230:intron | 30.0% | |
| GGTAAATTTCAAGATGAGAT+TGG | - | chr6_4:34046639-34046658 | Msa0986230:intron | 30.0% | |
| GAAACTTGATAGACATAGTT+AGG | + | chr6_4:34046708-34046727 | None:intergenic | 30.0% | |
| GTTTCTCGTTGATGTAAATT+TGG | - | chr6_4:34046752-34046771 | Msa0986230:intron | 30.0% | |
| !!! | CTGGTAATTTTTCAAGCAAA+AGG | - | chr6_4:34046840-34046859 | Msa0986230:intron | 30.0% |
| TGCATCCTTCTTAATATCTT+TGG | + | chr6_4:34046975-34046994 | None:intergenic | 30.0% | |
| !! | AGCAAAGGTATTAGTTGATT+TGG | - | chr6_4:34047007-34047026 | Msa0986230:CDS | 30.0% |
| TCAAATTTAGCTATCAGTGA+TGG | - | chr6_4:34047110-34047129 | Msa0986230:intron | 30.0% | |
| !!! | AGCAATTTTGGTTGACATTT+TGG | + | chr6_4:34047157-34047176 | None:intergenic | 30.0% |
| GGATTTCTAATAGTCAATTC+TGG | + | chr6_4:34047200-34047219 | None:intergenic | 30.0% | |
| GGAATTCAAATCTGTGGAAA+AGG | - | chr6_4:34045261-34045280 | Msa0986230:CDS | 35.0% | |
| !! | TTTGCAAAAAGGATGGGTTT+TGG | - | chr6_4:34045304-34045323 | Msa0986230:CDS | 35.0% |
| ! | GTCAAAAGAGGTACATTAGA+AGG | - | chr6_4:34045490-34045509 | Msa0986230:CDS | 35.0% |
| GAGGTACATTAGAAGGAAAT+TGG | - | chr6_4:34045497-34045516 | Msa0986230:CDS | 35.0% | |
| ! | CGCATATAAGACACACTTTT+AGG | + | chr6_4:34045568-34045587 | None:intergenic | 35.0% |
| ! | ATTGTAGCAACCTTTTCTGT+CGG | + | chr6_4:34045655-34045674 | None:intergenic | 35.0% |
| TTGCTACAATGTTCAGTGAA+GGG | - | chr6_4:34045665-34045684 | Msa0986230:intron | 35.0% | |
| CTTTCTCTAATAGGGATTGT+TGG | - | chr6_4:34045695-34045714 | Msa0986230:intron | 35.0% | |
| CGAAGAAAGAATTTAGACGT+TGG | - | chr6_4:34045736-34045755 | Msa0986230:intron | 35.0% | |
| TCCAATGTGATGAAGATTCT+CGG | - | chr6_4:34045827-34045846 | Msa0986230:intron | 35.0% | |
| AGTCAGAACGCTCATTTATA+TGG | - | chr6_4:34046028-34046047 | Msa0986230:CDS | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGGA+TGG | - | chr6_4:34046060-34046079 | Msa0986230:CDS | 35.0% |
| TGGTCAGTTATGACAGATTT+GGG | + | chr6_4:34046093-34046112 | None:intergenic | 35.0% | |
| TTTCAATTCTCGCTTGAAAG+TGG | + | chr6_4:34046235-34046254 | None:intergenic | 35.0% | |
| AGCCGATTAATGATTGAGTA+CGG | - | chr6_4:34046303-34046322 | Msa0986230:intron | 35.0% | |
| GTCCGTACTCAATCATTAAT+CGG | + | chr6_4:34046308-34046327 | None:intergenic | 35.0% | |
| ATTAATGATTGAGTACGGAC+TGG | - | chr6_4:34046308-34046327 | Msa0986230:intron | 35.0% | |
| ACAACAATGAATGGCTTCAA+GGG | - | chr6_4:34046331-34046350 | Msa0986230:intron | 35.0% | |
| !!! | ACCATTTTATTTTGCAGCGT+TGG | - | chr6_4:34046880-34046899 | Msa0986230:intron | 35.0% |
| TCCAACGCTGCAAAATAAAA+TGG | + | chr6_4:34046884-34046903 | None:intergenic | 35.0% | |
| ! | GATACGACGAGTAATTTTGA+TGG | - | chr6_4:34046936-34046955 | Msa0986230:CDS | 35.0% |
| TGTCAACCAAAATTGCTTGT+CGG | - | chr6_4:34047160-34047179 | Msa0986230:CDS | 35.0% | |
| ACAAACAAAAGGGAGAAAGA+AGG | - | chr6_4:34047229-34047248 | Msa0986230:CDS | 35.0% | |
| GGAATTCAAATCTGTGGAAA+AGG | - | chr6_4:34045261-34045280 | Msa0986230:CDS | 35.0% | |
| !! | TTTGCAAAAAGGATGGGTTT+TGG | - | chr6_4:34045304-34045323 | Msa0986230:CDS | 35.0% |
| ! | GTCAAAAGAGGTACATTAGA+AGG | - | chr6_4:34045490-34045509 | Msa0986230:CDS | 35.0% |
| GAGGTACATTAGAAGGAAAT+TGG | - | chr6_4:34045497-34045516 | Msa0986230:CDS | 35.0% | |
| ! | CGCATATAAGACACACTTTT+AGG | + | chr6_4:34045568-34045587 | None:intergenic | 35.0% |
| ! | ATTGTAGCAACCTTTTCTGT+CGG | + | chr6_4:34045655-34045674 | None:intergenic | 35.0% |
| TTGCTACAATGTTCAGTGAA+GGG | - | chr6_4:34045665-34045684 | Msa0986230:intron | 35.0% | |
| CTTTCTCTAATAGGGATTGT+TGG | - | chr6_4:34045695-34045714 | Msa0986230:intron | 35.0% | |
| CGAAGAAAGAATTTAGACGT+TGG | - | chr6_4:34045736-34045755 | Msa0986230:intron | 35.0% | |
| TCCAATGTGATGAAGATTCT+CGG | - | chr6_4:34045827-34045846 | Msa0986230:intron | 35.0% | |
| AGTCAGAACGCTCATTTATA+TGG | - | chr6_4:34046028-34046047 | Msa0986230:CDS | 35.0% | |
| ! | ACTTTTCTTAAGGCAATGGA+TGG | - | chr6_4:34046060-34046079 | Msa0986230:CDS | 35.0% |
| TGGTCAGTTATGACAGATTT+GGG | + | chr6_4:34046093-34046112 | None:intergenic | 35.0% | |
| TTTCAATTCTCGCTTGAAAG+TGG | + | chr6_4:34046235-34046254 | None:intergenic | 35.0% | |
| AGCCGATTAATGATTGAGTA+CGG | - | chr6_4:34046303-34046322 | Msa0986230:intron | 35.0% | |
| GTCCGTACTCAATCATTAAT+CGG | + | chr6_4:34046308-34046327 | None:intergenic | 35.0% | |
| ATTAATGATTGAGTACGGAC+TGG | - | chr6_4:34046308-34046327 | Msa0986230:intron | 35.0% | |
| ACAACAATGAATGGCTTCAA+GGG | - | chr6_4:34046331-34046350 | Msa0986230:intron | 35.0% | |
| !!! | ACCATTTTATTTTGCAGCGT+TGG | - | chr6_4:34046880-34046899 | Msa0986230:intron | 35.0% |
| TCCAACGCTGCAAAATAAAA+TGG | + | chr6_4:34046884-34046903 | None:intergenic | 35.0% | |
| ! | GATACGACGAGTAATTTTGA+TGG | - | chr6_4:34046936-34046955 | Msa0986230:CDS | 35.0% |
| TGTCAACCAAAATTGCTTGT+CGG | - | chr6_4:34047160-34047179 | Msa0986230:CDS | 35.0% | |
| ACAAACAAAAGGGAGAAAGA+AGG | - | chr6_4:34047229-34047248 | Msa0986230:CDS | 35.0% | |
| ! | TTCCACATTTGTTGACTGTG+TGG | + | chr6_4:34045167-34045186 | None:intergenic | 40.0% |
| TTGAATTCCATCCCCTTACA+AGG | + | chr6_4:34045250-34045269 | None:intergenic | 40.0% | |
| CATACAAAGACAGCTCTCTT+TGG | + | chr6_4:34045352-34045371 | None:intergenic | 40.0% | |
| AAGTGTTCTACTTCTCGAAC+TGG | - | chr6_4:34045448-34045467 | Msa0986230:CDS | 40.0% | |
| ! | ACCTCTTTTGACAACAAGTG+TGG | + | chr6_4:34045482-34045501 | None:intergenic | 40.0% |
| GAATGATCATAACCATCCCA+TGG | - | chr6_4:34045537-34045556 | Msa0986230:CDS | 40.0% | |
| !!! | ACACTTTTAGGGCTAACCAT+GGG | + | chr6_4:34045556-34045575 | None:intergenic | 40.0% |
| !! | CGGTGTCATAAAAGCATGAA+TGG | - | chr6_4:34045586-34045605 | Msa0986230:CDS | 40.0% |
| ! | AGAAGGTATACCGACAGAAA+AGG | - | chr6_4:34045642-34045661 | Msa0986230:CDS | 40.0% |
| GTTGCTACAATGTTCAGTGA+AGG | - | chr6_4:34045664-34045683 | Msa0986230:intron | 40.0% | |
| TGCTACAATGTTCAGTGAAG+GGG | - | chr6_4:34045666-34045685 | Msa0986230:intron | 40.0% | |
| ! | GGACTTGGCTTTCTCTAATA+GGG | - | chr6_4:34045687-34045706 | Msa0986230:intron | 40.0% |
| TCCGAGAATCTTCATCACAT+TGG | + | chr6_4:34045831-34045850 | None:intergenic | 40.0% | |
| CTGGTCAGTTATGACAGATT+TGG | + | chr6_4:34046094-34046113 | None:intergenic | 40.0% | |
| CAAATCTGTCATAACTGACC+AGG | - | chr6_4:34046092-34046111 | Msa0986230:CDS | 40.0% | |
| TGTCATAACTGACCAGGATT+TGG | - | chr6_4:34046098-34046117 | Msa0986230:CDS | 40.0% | |
| ! | TTGGCTATGAAAGCTGCTTT+AGG | - | chr6_4:34046117-34046136 | Msa0986230:CDS | 40.0% |
| TCCTAATATGCCATAAGCAG+AGG | + | chr6_4:34046170-34046189 | None:intergenic | 40.0% | |
| GACAACAATGAATGGCTTCA+AGG | - | chr6_4:34046330-34046349 | Msa0986230:intron | 40.0% | |
| GACACACAGATTGCAAAATG+TGG | - | chr6_4:34046774-34046793 | Msa0986230:intron | 40.0% | |
| !! | AGTTTTTGGGGATATTGTGC+AGG | - | chr6_4:34046811-34046830 | Msa0986230:intron | 40.0% |
| GATATTGTGCAGGCATATAC+TGG | - | chr6_4:34046821-34046840 | Msa0986230:intron | 40.0% | |
| CGCTGCAAAATAAAATGGTC+AGG | + | chr6_4:34046879-34046898 | None:intergenic | 40.0% | |
| GCACGCCAAAGATATTAAGA+AGG | - | chr6_4:34046967-34046986 | Msa0986230:CDS | 40.0% | |
| !! | ACATTTTGGCCAGATTCCAA+AGG | + | chr6_4:34047143-34047162 | None:intergenic | 40.0% |
| CACGCAATGCACAAACAAAA+GGG | - | chr6_4:34047219-34047238 | Msa0986230:CDS | 40.0% | |
| ACAAAAGGGAGAAAGAAGGA+TGG | - | chr6_4:34047233-34047252 | Msa0986230:CDS | 40.0% | |
| ! | AGAAAAGCATGTCATGAGTG+TGG | - | chr6_4:34047329-34047348 | Msa0986230:CDS | 40.0% |
| ! | TTCCACATTTGTTGACTGTG+TGG | + | chr6_4:34045167-34045186 | None:intergenic | 40.0% |
| TTGAATTCCATCCCCTTACA+AGG | + | chr6_4:34045250-34045269 | None:intergenic | 40.0% | |
| CATACAAAGACAGCTCTCTT+TGG | + | chr6_4:34045352-34045371 | None:intergenic | 40.0% | |
| AAGTGTTCTACTTCTCGAAC+TGG | - | chr6_4:34045448-34045467 | Msa0986230:CDS | 40.0% | |
| ! | ACCTCTTTTGACAACAAGTG+TGG | + | chr6_4:34045482-34045501 | None:intergenic | 40.0% |
| GAATGATCATAACCATCCCA+TGG | - | chr6_4:34045537-34045556 | Msa0986230:CDS | 40.0% | |
| !!! | ACACTTTTAGGGCTAACCAT+GGG | + | chr6_4:34045556-34045575 | None:intergenic | 40.0% |
| !! | CGGTGTCATAAAAGCATGAA+TGG | - | chr6_4:34045586-34045605 | Msa0986230:CDS | 40.0% |
| ! | AGAAGGTATACCGACAGAAA+AGG | - | chr6_4:34045642-34045661 | Msa0986230:CDS | 40.0% |
| GTTGCTACAATGTTCAGTGA+AGG | - | chr6_4:34045664-34045683 | Msa0986230:intron | 40.0% | |
| TGCTACAATGTTCAGTGAAG+GGG | - | chr6_4:34045666-34045685 | Msa0986230:intron | 40.0% | |
| ! | GGACTTGGCTTTCTCTAATA+GGG | - | chr6_4:34045687-34045706 | Msa0986230:intron | 40.0% |
| TCCGAGAATCTTCATCACAT+TGG | + | chr6_4:34045831-34045850 | None:intergenic | 40.0% | |
| CTGGTCAGTTATGACAGATT+TGG | + | chr6_4:34046094-34046113 | None:intergenic | 40.0% | |
| CAAATCTGTCATAACTGACC+AGG | - | chr6_4:34046092-34046111 | Msa0986230:CDS | 40.0% | |
| TGTCATAACTGACCAGGATT+TGG | - | chr6_4:34046098-34046117 | Msa0986230:CDS | 40.0% | |
| ! | TTGGCTATGAAAGCTGCTTT+AGG | - | chr6_4:34046117-34046136 | Msa0986230:CDS | 40.0% |
| TCCTAATATGCCATAAGCAG+AGG | + | chr6_4:34046170-34046189 | None:intergenic | 40.0% | |
| GACAACAATGAATGGCTTCA+AGG | - | chr6_4:34046330-34046349 | Msa0986230:intron | 40.0% | |
| GACACACAGATTGCAAAATG+TGG | - | chr6_4:34046774-34046793 | Msa0986230:intron | 40.0% | |
| !! | AGTTTTTGGGGATATTGTGC+AGG | - | chr6_4:34046811-34046830 | Msa0986230:intron | 40.0% |
| GATATTGTGCAGGCATATAC+TGG | - | chr6_4:34046821-34046840 | Msa0986230:intron | 40.0% | |
| CGCTGCAAAATAAAATGGTC+AGG | + | chr6_4:34046879-34046898 | None:intergenic | 40.0% | |
| GCACGCCAAAGATATTAAGA+AGG | - | chr6_4:34046967-34046986 | Msa0986230:CDS | 40.0% | |
| !! | ACATTTTGGCCAGATTCCAA+AGG | + | chr6_4:34047143-34047162 | None:intergenic | 40.0% |
| CACGCAATGCACAAACAAAA+GGG | - | chr6_4:34047219-34047238 | Msa0986230:CDS | 40.0% | |
| ACAAAAGGGAGAAAGAAGGA+TGG | - | chr6_4:34047233-34047252 | Msa0986230:CDS | 40.0% | |
| ! | AGAAAAGCATGTCATGAGTG+TGG | - | chr6_4:34047329-34047348 | Msa0986230:CDS | 40.0% |
| AGCCACACAGTCAACAAATG+TGG | - | chr6_4:34045162-34045181 | Msa0986230:CDS | 45.0% | |
| TTAGCTGCTGCTCCTAATGT+TGG | - | chr6_4:34045205-34045224 | Msa0986230:CDS | 45.0% | |
| TAGTGAACCTTGTAAGGGGA+TGG | - | chr6_4:34045240-34045259 | Msa0986230:CDS | 45.0% | |
| GGGGATGGAATTCAAATCTG+TGG | - | chr6_4:34045255-34045274 | Msa0986230:CDS | 45.0% | |
| !! | GCCACACTTGTTGTCAAAAG+AGG | - | chr6_4:34045478-34045497 | Msa0986230:CDS | 45.0% |
| !!! | TTTTAGGGCTAACCATGGGA+TGG | + | chr6_4:34045552-34045571 | None:intergenic | 45.0% |
| !!! | CACACTTTTAGGGCTAACCA+TGG | + | chr6_4:34045557-34045576 | None:intergenic | 45.0% |
| AATGTTCAGTGAAGGGGACT+TGG | - | chr6_4:34045672-34045691 | Msa0986230:intron | 45.0% | |
| ! | GGGACTTGGCTTTCTCTAAT+AGG | - | chr6_4:34045686-34045705 | Msa0986230:intron | 45.0% |
| AATCCAACAAACGGGGCAAA+TGG | + | chr6_4:34045958-34045977 | None:intergenic | 45.0% | |
| CAGCTTTCATAGCCAAATCC+TGG | + | chr6_4:34046113-34046132 | None:intergenic | 45.0% | |
| GCCTCTGCTTATGGCATATT+AGG | - | chr6_4:34046166-34046185 | Msa0986230:intron | 45.0% | |
| !! | ACGGACTGGACAACAATGAA+TGG | - | chr6_4:34046322-34046341 | Msa0986230:intron | 45.0% |
| GTCTACAGGGTCAAAACTTG+AGG | - | chr6_4:34046581-34046600 | Msa0986230:intron | 45.0% | |
| ! | ATCTCGAGCATTGTAGTTGC+TGG | + | chr6_4:34046730-34046749 | None:intergenic | 45.0% |
| GCATGCTCAACAAGAAGCAA+AGG | - | chr6_4:34046992-34047011 | Msa0986230:CDS | 45.0% | |
| ! | CAGTGATGGAGTTTCTCCTT+TGG | - | chr6_4:34047124-34047143 | Msa0986230:intron | 45.0% |
| !! | GGAGTTTCTCCTTTGGAATC+TGG | - | chr6_4:34047131-34047150 | Msa0986230:intron | 45.0% |
| CAACCAAAATTGCTTGTCGG+AGG | - | chr6_4:34047163-34047182 | Msa0986230:CDS | 45.0% | |
| ! | CTTCCTCCGACAAGCAATTT+TGG | + | chr6_4:34047169-34047188 | None:intergenic | 45.0% |
| !! | CCTTTTGTTTGTGCATTGCG+TGG | + | chr6_4:34047221-34047240 | None:intergenic | 45.0% |
| CCACGCAATGCACAAACAAA+AGG | - | chr6_4:34047218-34047237 | Msa0986230:CDS | 45.0% | |
| TGTCATGAGTGTGGTGAATC+TGG | - | chr6_4:34047338-34047357 | Msa0986230:CDS | 45.0% | |
| AGCCACACAGTCAACAAATG+TGG | - | chr6_4:34045162-34045181 | Msa0986230:CDS | 45.0% | |
| TTAGCTGCTGCTCCTAATGT+TGG | - | chr6_4:34045205-34045224 | Msa0986230:CDS | 45.0% | |
| TAGTGAACCTTGTAAGGGGA+TGG | - | chr6_4:34045240-34045259 | Msa0986230:CDS | 45.0% | |
| GGGGATGGAATTCAAATCTG+TGG | - | chr6_4:34045255-34045274 | Msa0986230:CDS | 45.0% | |
| !! | GCCACACTTGTTGTCAAAAG+AGG | - | chr6_4:34045478-34045497 | Msa0986230:CDS | 45.0% |
| !!! | TTTTAGGGCTAACCATGGGA+TGG | + | chr6_4:34045552-34045571 | None:intergenic | 45.0% |
| !!! | CACACTTTTAGGGCTAACCA+TGG | + | chr6_4:34045557-34045576 | None:intergenic | 45.0% |
| AATGTTCAGTGAAGGGGACT+TGG | - | chr6_4:34045672-34045691 | Msa0986230:intron | 45.0% | |
| ! | GGGACTTGGCTTTCTCTAAT+AGG | - | chr6_4:34045686-34045705 | Msa0986230:intron | 45.0% |
| AATCCAACAAACGGGGCAAA+TGG | + | chr6_4:34045958-34045977 | None:intergenic | 45.0% | |
| CAGCTTTCATAGCCAAATCC+TGG | + | chr6_4:34046113-34046132 | None:intergenic | 45.0% | |
| GCCTCTGCTTATGGCATATT+AGG | - | chr6_4:34046166-34046185 | Msa0986230:intron | 45.0% | |
| !! | ACGGACTGGACAACAATGAA+TGG | - | chr6_4:34046322-34046341 | Msa0986230:intron | 45.0% |
| GTCTACAGGGTCAAAACTTG+AGG | - | chr6_4:34046581-34046600 | Msa0986230:intron | 45.0% | |
| ! | ATCTCGAGCATTGTAGTTGC+TGG | + | chr6_4:34046730-34046749 | None:intergenic | 45.0% |
| GCATGCTCAACAAGAAGCAA+AGG | - | chr6_4:34046992-34047011 | Msa0986230:CDS | 45.0% | |
| ! | CAGTGATGGAGTTTCTCCTT+TGG | - | chr6_4:34047124-34047143 | Msa0986230:intron | 45.0% |
| !! | GGAGTTTCTCCTTTGGAATC+TGG | - | chr6_4:34047131-34047150 | Msa0986230:intron | 45.0% |
| CAACCAAAATTGCTTGTCGG+AGG | - | chr6_4:34047163-34047182 | Msa0986230:CDS | 45.0% | |
| ! | CTTCCTCCGACAAGCAATTT+TGG | + | chr6_4:34047169-34047188 | None:intergenic | 45.0% |
| !! | CCTTTTGTTTGTGCATTGCG+TGG | + | chr6_4:34047221-34047240 | None:intergenic | 45.0% |
| CCACGCAATGCACAAACAAA+AGG | - | chr6_4:34047218-34047237 | Msa0986230:CDS | 45.0% | |
| TGTCATGAGTGTGGTGAATC+TGG | - | chr6_4:34047338-34047357 | Msa0986230:CDS | 45.0% | |
| ! | ATGCCATTTGCCCCGTTTGT+TGG | - | chr6_4:34045952-34045971 | Msa0986230:CDS | 50.0% |
| ! | CAGAGGCGATGTCTAGTTTC+TGG | + | chr6_4:34046153-34046172 | None:intergenic | 50.0% |
| CTAGACATCGCCTCTGCTTA+TGG | - | chr6_4:34046157-34046176 | Msa0986230:intron | 50.0% | |
| ! | TGATTTGAGGCGCACTCGTA+TGG | - | chr6_4:34047067-34047086 | Msa0986230:CDS | 50.0% |
| ! | ATGCCATTTGCCCCGTTTGT+TGG | - | chr6_4:34045952-34045971 | Msa0986230:CDS | 50.0% |
| ! | CAGAGGCGATGTCTAGTTTC+TGG | + | chr6_4:34046153-34046172 | None:intergenic | 50.0% |
| CTAGACATCGCCTCTGCTTA+TGG | - | chr6_4:34046157-34046176 | Msa0986230:intron | 50.0% | |
| ! | TGATTTGAGGCGCACTCGTA+TGG | - | chr6_4:34047067-34047086 | Msa0986230:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 34045139 | 34047403 | 34045139 | ID=Msa0986230;Name=Msa0986230 |
| chr6_4 | mRNA | 34045139 | 34047403 | 34045139 | ID=Msa0986230-mRNA-1;Parent=Msa0986230;Name=Msa0986230-mRNA-1;_AED=0.08;_eAED=0.13;_QI=0|0|0|1|0|0|5|0|439 |
| chr6_4 | exon | 34047160 | 34047403 | 34047160 | ID=Msa0986230-mRNA-1:exon:8879;Parent=Msa0986230-mRNA-1 |
| chr6_4 | exon | 34046896 | 34047126 | 34046896 | ID=Msa0986230-mRNA-1:exon:8878;Parent=Msa0986230-mRNA-1 |
| chr6_4 | exon | 34046190 | 34046247 | 34046190 | ID=Msa0986230-mRNA-1:exon:8877;Parent=Msa0986230-mRNA-1 |
| chr6_4 | exon | 34045903 | 34046147 | 34045903 | ID=Msa0986230-mRNA-1:exon:8876;Parent=Msa0986230-mRNA-1 |
| chr6_4 | exon | 34045139 | 34045680 | 34045139 | ID=Msa0986230-mRNA-1:exon:8875;Parent=Msa0986230-mRNA-1 |
| chr6_4 | CDS | 34047160 | 34047403 | 34047160 | ID=Msa0986230-mRNA-1:cds;Parent=Msa0986230-mRNA-1 |
| chr6_4 | CDS | 34046896 | 34047126 | 34046896 | ID=Msa0986230-mRNA-1:cds;Parent=Msa0986230-mRNA-1 |
| chr6_4 | CDS | 34046190 | 34046247 | 34046190 | ID=Msa0986230-mRNA-1:cds;Parent=Msa0986230-mRNA-1 |
| chr6_4 | CDS | 34045903 | 34046147 | 34045903 | ID=Msa0986230-mRNA-1:cds;Parent=Msa0986230-mRNA-1 |
| chr6_4 | CDS | 34045139 | 34045680 | 34045139 | ID=Msa0986230-mRNA-1:cds;Parent=Msa0986230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
