Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987480 | XP_013452015.1 | 70.642 | 327 | 66 | 2 | 1 | 297 | 1 | 327 | 4.60e-161 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987480 | sp|Q94BZ5|HSFA5_ARATH | 56.410 | 234 | 100 | 2 | 1 | 232 | 1 | 234 | 4.87e-86 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987480 | A0A072UAD0 | 70.642 | 327 | 66 | 2 | 1 | 297 | 1 | 327 | 2.20e-161 | 461 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0987480 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987480 | MtrunA17_Chr6g0467041 | 70.642 | 327 | 66 | 2 | 1 | 297 | 1 | 327 | 4.23e-165 | 461 |
| Msa0987480 | MtrunA17_Chr8g0378061 | 74.101 | 278 | 28 | 1 | 23 | 256 | 23 | 300 | 1.60e-143 | 412 |
| Msa0987480 | MtrunA17_Chr8g0378061 | 79.545 | 44 | 9 | 0 | 256 | 299 | 414 | 457 | 1.83e-15 | 76.3 |
| Msa0987480 | MtrunA17_Chr2g0330821 | 55.477 | 283 | 94 | 6 | 1 | 254 | 60 | 339 | 1.62e-95 | 286 |
| Msa0987480 | MtrunA17_Chr2g0330841 | 51.681 | 238 | 64 | 3 | 64 | 256 | 29 | 260 | 4.21e-70 | 222 |
| Msa0987480 | MtrunA17_Chr5g0410881 | 49.074 | 216 | 86 | 4 | 22 | 218 | 32 | 242 | 2.09e-63 | 207 |
| Msa0987480 | MtrunA17_Chr8g0379701 | 49.519 | 208 | 93 | 4 | 15 | 216 | 5 | 206 | 1.42e-59 | 195 |
| Msa0987480 | MtrunA17_Chr4g0039891 | 44.498 | 209 | 104 | 3 | 20 | 216 | 10 | 218 | 2.04e-54 | 184 |
| Msa0987480 | MtrunA17_Chr3g0135831 | 36.601 | 306 | 160 | 10 | 19 | 297 | 43 | 341 | 7.49e-53 | 177 |
| Msa0987480 | MtrunA17_Chr1g0204741 | 37.124 | 299 | 156 | 9 | 7 | 287 | 20 | 304 | 1.13e-51 | 172 |
| Msa0987480 | MtrunA17_Chr7g0260331 | 43.961 | 207 | 106 | 4 | 19 | 215 | 46 | 252 | 2.40e-49 | 167 |
| Msa0987480 | MtrunA17_Chr1g0185131 | 38.589 | 241 | 132 | 4 | 22 | 253 | 32 | 265 | 1.88e-48 | 164 |
| Msa0987480 | MtrunA17_Chr4g0071051 | 38.912 | 239 | 127 | 6 | 19 | 249 | 98 | 325 | 1.10e-45 | 159 |
| Msa0987480 | MtrunA17_Chr3g0134031 | 66.667 | 102 | 34 | 0 | 12 | 113 | 14 | 115 | 5.18e-45 | 156 |
| Msa0987480 | MtrunA17_Chr8g0392001 | 38.567 | 293 | 149 | 11 | 20 | 293 | 20 | 300 | 7.56e-45 | 156 |
| Msa0987480 | MtrunA17_Chr6g0485571 | 40.654 | 214 | 100 | 2 | 20 | 219 | 9 | 209 | 9.46e-44 | 152 |
| Msa0987480 | MtrunA17_Chr5g0402291 | 61.321 | 106 | 41 | 0 | 17 | 122 | 4 | 109 | 1.59e-42 | 147 |
| Msa0987480 | MtrunA17_Chr5g0441531 | 68.817 | 93 | 29 | 0 | 21 | 113 | 24 | 116 | 4.46e-42 | 145 |
| Msa0987480 | MtrunA17_Chr5g0397881 | 59.259 | 108 | 44 | 0 | 6 | 113 | 8 | 115 | 2.04e-41 | 146 |
| Msa0987480 | MtrunA17_Chr2g0284481 | 58.333 | 108 | 45 | 0 | 12 | 119 | 5 | 112 | 1.39e-40 | 145 |
| Msa0987480 | MtrunA17_Chr6g0472421 | 62.366 | 93 | 35 | 0 | 21 | 113 | 32 | 124 | 4.09e-38 | 137 |
| Msa0987480 | MtrunA17_Chr7g0257331 | 59.140 | 93 | 38 | 0 | 21 | 113 | 21 | 113 | 6.01e-38 | 134 |
| Msa0987480 | MtrunA17_Chr1g0203601 | 60.000 | 95 | 38 | 0 | 21 | 115 | 17 | 111 | 1.90e-37 | 135 |
| Msa0987480 | MtrunA17_Chr4g0047421 | 57.732 | 97 | 37 | 1 | 21 | 113 | 32 | 128 | 4.48e-34 | 123 |
| Msa0987480 | MtrunA17_Chr8g0375041 | 55.914 | 93 | 41 | 0 | 21 | 113 | 8 | 100 | 8.37e-33 | 121 |
| Msa0987480 | MtrunA17_Chr1g0179321 | 62.903 | 62 | 23 | 0 | 20 | 81 | 47 | 108 | 7.72e-25 | 96.3 |
| Msa0987480 | MtrunA17_Chr4g0023771 | 60.870 | 69 | 26 | 1 | 12 | 79 | 4 | 72 | 1.34e-20 | 85.1 |
| Msa0987480 | MtrunA17_Chr1g0179311 | 30.818 | 159 | 99 | 4 | 61 | 216 | 1 | 151 | 8.54e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0987480 | AT4G13980.1 | 56.410 | 234 | 100 | 2 | 1 | 232 | 1 | 234 | 4.95e-87 | 268 |
| Msa0987480 | AT3G02990.1 | 42.918 | 233 | 120 | 4 | 8 | 228 | 9 | 240 | 8.96e-59 | 195 |
| Msa0987480 | AT1G32330.2 | 50.000 | 204 | 88 | 3 | 1 | 190 | 16 | 219 | 1.04e-58 | 195 |
| Msa0987480 | AT1G32330.1 | 50.000 | 204 | 88 | 3 | 1 | 190 | 16 | 219 | 1.13e-58 | 195 |
| Msa0987480 | AT5G16820.1 | 47.393 | 211 | 96 | 4 | 20 | 216 | 25 | 234 | 4.28e-58 | 194 |
| Msa0987480 | AT5G16820.2 | 47.393 | 211 | 96 | 4 | 20 | 216 | 25 | 234 | 4.28e-58 | 194 |
| Msa0987480 | AT4G17750.1 | 46.759 | 216 | 94 | 4 | 22 | 216 | 52 | 267 | 6.65e-58 | 193 |
| Msa0987480 | AT5G45710.3 | 38.782 | 312 | 152 | 9 | 14 | 295 | 5 | 307 | 2.35e-55 | 183 |
| Msa0987480 | AT5G45710.1 | 38.782 | 312 | 152 | 9 | 14 | 295 | 5 | 307 | 2.35e-55 | 183 |
| Msa0987480 | AT4G18880.1 | 48.815 | 211 | 98 | 3 | 16 | 220 | 9 | 215 | 1.54e-53 | 180 |
| Msa0987480 | AT2G26150.1 | 42.342 | 222 | 120 | 4 | 19 | 232 | 41 | 262 | 1.03e-51 | 173 |
| Msa0987480 | AT2G26150.4 | 42.342 | 222 | 120 | 4 | 19 | 232 | 41 | 262 | 1.03e-51 | 173 |
| Msa0987480 | AT3G51910.1 | 41.706 | 211 | 106 | 4 | 22 | 226 | 29 | 228 | 5.88e-48 | 161 |
| Msa0987480 | AT5G03720.2 | 42.079 | 202 | 109 | 3 | 20 | 213 | 53 | 254 | 2.84e-47 | 164 |
| Msa0987480 | AT5G03720.1 | 42.079 | 202 | 109 | 3 | 20 | 213 | 53 | 254 | 2.84e-47 | 164 |
| Msa0987480 | AT3G22830.1 | 39.352 | 216 | 118 | 3 | 19 | 221 | 58 | 273 | 4.40e-46 | 160 |
| Msa0987480 | AT3G24520.1 | 45.198 | 177 | 77 | 3 | 20 | 195 | 15 | 172 | 5.53e-46 | 158 |
| Msa0987480 | AT1G46264.1 | 62.500 | 112 | 32 | 1 | 21 | 122 | 33 | 144 | 1.99e-44 | 154 |
| Msa0987480 | AT1G67970.1 | 45.596 | 193 | 90 | 6 | 20 | 201 | 17 | 205 | 3.79e-44 | 154 |
| Msa0987480 | AT5G43840.1 | 42.308 | 182 | 94 | 2 | 21 | 201 | 18 | 189 | 2.42e-43 | 150 |
| Msa0987480 | AT5G54070.1 | 42.623 | 183 | 99 | 2 | 20 | 201 | 69 | 246 | 4.27e-42 | 148 |
| Msa0987480 | AT3G63350.1 | 40.223 | 179 | 106 | 1 | 19 | 196 | 25 | 203 | 1.07e-41 | 145 |
| Msa0987480 | AT4G11660.1 | 61.000 | 100 | 39 | 0 | 14 | 113 | 51 | 150 | 1.58e-38 | 140 |
| Msa0987480 | AT4G36990.1 | 57.407 | 108 | 44 | 1 | 8 | 115 | 2 | 107 | 2.62e-38 | 137 |
| Msa0987480 | AT5G62020.1 | 50.420 | 119 | 58 | 1 | 1 | 118 | 1 | 119 | 1.02e-37 | 135 |
| Msa0987480 | AT2G41690.1 | 60.000 | 95 | 38 | 0 | 22 | 116 | 40 | 134 | 7.24e-37 | 132 |
| Msa0987480 | AT4G18870.1 | 46.591 | 88 | 47 | 0 | 22 | 109 | 146 | 233 | 1.11e-22 | 95.5 |
| Msa0987480 | AT4G18870.1 | 45.833 | 96 | 51 | 1 | 14 | 109 | 5 | 99 | 2.05e-22 | 94.7 |
| Msa0987480 | AT2G26150.3 | 31.500 | 200 | 122 | 6 | 43 | 232 | 13 | 207 | 7.95e-17 | 79.3 |
| Msa0987480 | AT2G26150.2 | 31.500 | 200 | 122 | 6 | 43 | 232 | 13 | 207 | 7.95e-17 | 79.3 |
| Msa0987480 | AT1G77570.1 | 42.391 | 92 | 49 | 3 | 19 | 106 | 22 | 113 | 9.76e-17 | 76.3 |
| Msa0987480 | AT5G45710.4 | 29.091 | 220 | 117 | 9 | 106 | 295 | 1 | 211 | 1.65e-13 | 69.3 |
| Msa0987480 | AT5G45710.2 | 29.091 | 220 | 117 | 9 | 106 | 295 | 1 | 211 | 1.65e-13 | 69.3 |
| Msa0987480 | AT4G19630.1 | 34.021 | 97 | 61 | 1 | 19 | 112 | 8 | 104 | 2.93e-13 | 66.2 |
Find 70 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCAATGCTGCCCTTTC+TGG | -0.010683 | 6_4:-37920555 | None:intergenic |
| CTTCTTTGAGAAGGCTCTTC+AGG | 0.211830 | 6_4:+37920722 | Msa0987480:CDS |
| GAAATTGCTGTGTTTGAAAT+AGG | 0.280393 | 6_4:-37919379 | None:intergenic |
| ATAATTATAGCTTAAGAGTT+TGG | 0.284728 | 6_4:-37920619 | None:intergenic |
| CCACAGATGAGATCGTTTCT+TGG | 0.319260 | 6_4:+37919292 | Msa0987480:CDS |
| AAGGAGTGAATGATGTGTTT+TGG | 0.360172 | 6_4:+37920991 | Msa0987480:CDS |
| ATAACAAAAGCTTCATCGTT+TGG | 0.362747 | 6_4:+37919322 | Msa0987480:CDS |
| ACATTACCTGAAGCCTCCTT+TGG | 0.373921 | 6_4:-37920945 | None:intergenic |
| AGCAGAACGCGAGAGAATTC+AGG | 0.375956 | 6_4:-37919351 | None:intergenic |
| CAAAATCGAATCCATCGATT+TGG | 0.376737 | 6_4:+37920773 | Msa0987480:CDS |
| TAAGAAAAGGCGATTGTCTC+AGG | 0.414889 | 6_4:+37920806 | Msa0987480:CDS |
| ACCAAGCTACCTTCGGCAAC+AGG | 0.417714 | 6_4:-37920843 | None:intergenic |
| AGCTTAAGAGTTTGGATTGA+AGG | 0.419735 | 6_4:-37920611 | None:intergenic |
| TTGCTGTGTTTGAAATAGGT+TGG | 0.457272 | 6_4:-37919375 | None:intergenic |
| GCCGAGCAGCTGCTTCGACT+TGG | 0.459497 | 6_4:-37920968 | None:intergenic |
| TGGAAACTTATAATAAGAAA+AGG | 0.461564 | 6_4:+37920793 | Msa0987480:CDS |
| TGCTGTGTTTGAAATAGGTT+GGG | 0.465561 | 6_4:-37919374 | None:intergenic |
| TCTGCTTCCGTCGGCAGCAG+TGG | 0.466428 | 6_4:-37919217 | None:intergenic |
| CCACAGTCATAGTCATCCTC+CGG | 0.469987 | 6_4:+37920518 | Msa0987480:CDS |
| AAAATCAGATCCTGATCGTT+GGG | 0.473476 | 6_4:+37920425 | Msa0987480:CDS |
| TTGGCAAACTCCCAACGATC+AGG | 0.478885 | 6_4:-37920435 | None:intergenic |
| GCTTAAGAGTTTGGATTGAA+GGG | 0.480417 | 6_4:-37920610 | None:intergenic |
| GCTGATCCAAAGGAGGCTTC+AGG | 0.482903 | 6_4:+37920939 | Msa0987480:CDS |
| GAAGCCTCCTTTGGATCAGC+GGG | 0.484852 | 6_4:-37920936 | None:intergenic |
| CGACGGAAGCAGAGAAGGTA+TGG | 0.499479 | 6_4:+37919227 | Msa0987480:CDS |
| TGAGACAGAAAAGCTTCAGC+TGG | 0.500611 | 6_4:+37920644 | Msa0987480:CDS |
| ATTATAAGTTTCCAAATCGA+TGG | 0.506141 | 6_4:-37920784 | None:intergenic |
| ATTGAGCTGACGGATGAAGC+TGG | 0.506271 | 6_4:-37919403 | None:intergenic |
| TTTGCAGAACTTCTTTGAGA+AGG | 0.509914 | 6_4:+37920713 | Msa0987480:CDS |
| GCCTGTTGCCGAAGGTAGCT+TGG | 0.510527 | 6_4:+37920842 | Msa0987480:CDS |
| TTCTCTCAGAATCTTTCTGA+AGG | 0.511282 | 6_4:+37920882 | Msa0987480:CDS |
| TCTGGATCTGCAGCAGAACC+CGG | 0.520390 | 6_4:-37920537 | None:intergenic |
| AGATCCAGAAAGGGCAGCAT+TGG | 0.522645 | 6_4:+37920551 | Msa0987480:CDS |
| AACTGACCCCGCTGATCCAA+AGG | 0.526560 | 6_4:+37920929 | Msa0987480:CDS |
| CTTTCTGAAGGAGAACTGAC+AGG | 0.534056 | 6_4:+37920894 | Msa0987480:CDS |
| AAGGTCAACCAAGCTACCTT+CGG | 0.534888 | 6_4:-37920850 | None:intergenic |
| TCTGAGAGAAATTGCAAGGA+AGG | 0.536129 | 6_4:-37920869 | None:intergenic |
| GTCGAAGCAGCTGCTCGGCA+AGG | 0.540320 | 6_4:+37920972 | Msa0987480:CDS |
| AACAGCATGGACTTTCAGTA+AGG | 0.541453 | 6_4:-37921022 | None:intergenic |
| GAAAATCAGATCCTGATCGT+TGG | 0.543561 | 6_4:+37920424 | Msa0987480:CDS |
| TCATACGTCTTCTGAAGAAA+CGG | 0.543831 | 6_4:-37919252 | None:intergenic |
| GTTCTGCTGCAGATCCAGAA+AGG | 0.546661 | 6_4:+37920541 | Msa0987480:CDS |
| TCAGCGGCGATTGGAAGGCA+TGG | 0.549084 | 6_4:+37920674 | Msa0987480:CDS |
| CCGGAGGATGACTATGACTG+TGG | 0.551542 | 6_4:-37920518 | None:intergenic |
| TCCAAGTCGAAGCAGCTGCT+CGG | 0.556549 | 6_4:+37920967 | Msa0987480:CDS |
| CACAGTCATAGTCATCCTCC+GGG | 0.559092 | 6_4:+37920519 | Msa0987480:CDS |
| TTCTGCTGCAGATCCAGAAA+GGG | 0.560266 | 6_4:+37920542 | Msa0987480:CDS |
| GACTGTGGATAGGTTTCTTG+CGG | 0.574041 | 6_4:-37920503 | None:intergenic |
| GCTGCCGACGGAAGCAGAGA+AGG | 0.581055 | 6_4:+37919222 | Msa0987480:CDS |
| AGAAACGATCTCATCTGTGG+TGG | 0.582151 | 6_4:-37919289 | None:intergenic |
| TGAAGCCTCCTTTGGATCAG+CGG | 0.591974 | 6_4:-37920937 | None:intergenic |
| GATTGGAAGGCATGGAGAAG+AGG | 0.593047 | 6_4:+37920682 | Msa0987480:CDS |
| CACATGCAGCCTGTTGCCGA+AGG | 0.596050 | 6_4:+37920834 | Msa0987480:CDS |
| TCTTCATTGTCTGAACAGCA+TGG | 0.597736 | 6_4:-37921035 | None:intergenic |
| TTACATAGGTATTGAGCTGA+CGG | 0.598207 | 6_4:-37919413 | None:intergenic |
| TCATCAGCCACTGCTGCCGA+CGG | 0.606067 | 6_4:+37919210 | Msa0987480:CDS |
| GGATGACTATGACTGTGGAT+AGG | 0.617132 | 6_4:-37920513 | None:intergenic |
| AGATTCTGAGAGAAATTGCA+AGG | 0.618748 | 6_4:-37920873 | None:intergenic |
| CATACCTTCTCTGCTTCCGT+CGG | 0.623107 | 6_4:-37919226 | None:intergenic |
| GAAACGATCTCATCTGTGGT+GGG | 0.626600 | 6_4:-37919288 | None:intergenic |
| AGAACGCGAGAGAATTCAGG+AGG | 0.628084 | 6_4:-37919348 | None:intergenic |
| CCAAGAAACGATCTCATCTG+TGG | 0.633047 | 6_4:-37919292 | None:intergenic |
| ATGCTGTTCAGACAATGAAG+AGG | 0.637659 | 6_4:+37921037 | Msa0987480:CDS |
| GCGGGAAAGAAGTTCAACAA+TGG | 0.640883 | 6_4:-37920751 | None:intergenic |
| TGACCCCGCTGATCCAAAGG+AGG | 0.662370 | 6_4:+37920932 | Msa0987480:CDS |
| TCTTCAGAAGACGTATGACA+TGG | 0.665030 | 6_4:+37919257 | Msa0987480:CDS |
| GAACGCGAGAGAATTCAGGA+GGG | 0.693421 | 6_4:-37919347 | None:intergenic |
| GCAGTGGCTGATGATGATTG+TGG | 0.706595 | 6_4:-37919201 | None:intergenic |
| AAGCCTCCTTTGGATCAGCG+GGG | 0.731334 | 6_4:-37920935 | None:intergenic |
| GGATCTGCAGCAGAACCCGG+AGG | 0.734050 | 6_4:-37920534 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTATAAATTTTTCAT+TGG | - | chr6_4:37920457-37920476 | None:intergenic | 10.0% |
| !!! | ATCTTTTATAAATTTTTCAT+TGG | - | chr6_4:37920457-37920476 | None:intergenic | 10.0% |
| !! | TTATCATATTTATATAGTTC+AGG | - | chr6_4:37920098-37920117 | None:intergenic | 15.0% |
| !!! | ATGTATGTTTTAATTTGTTA+CGG | + | chr6_4:37920369-37920388 | Msa0987480:intron | 15.0% |
| !! | TTATCATATTTATATAGTTC+AGG | - | chr6_4:37920098-37920117 | None:intergenic | 15.0% |
| !!! | ATGTATGTTTTAATTTGTTA+CGG | + | chr6_4:37920369-37920388 | Msa0987480:intron | 15.0% |
| !!! | TTTGTTGTATTTGTATGATT+TGG | + | chr6_4:37919528-37919547 | Msa0987480:intron | 20.0% |
| !! | TGATTAGTAAGATAAGAATT+AGG | + | chr6_4:37919634-37919653 | Msa0987480:intron | 20.0% |
| !! | ATTATTTCATTGAGTTTAGT+TGG | + | chr6_4:37919674-37919693 | Msa0987480:intron | 20.0% |
| !! | AGGATTAAACAATAAAAATC+AGG | - | chr6_4:37920127-37920146 | None:intergenic | 20.0% |
| !! | ATAATTATAGCTTAAGAGTT+TGG | - | chr6_4:37920622-37920641 | None:intergenic | 20.0% |
| !! | TGGAAACTTATAATAAGAAA+AGG | + | chr6_4:37920793-37920812 | Msa0987480:CDS | 20.0% |
| !!! | TTTGTTGTATTTGTATGATT+TGG | + | chr6_4:37919528-37919547 | Msa0987480:intron | 20.0% |
| !! | TGATTAGTAAGATAAGAATT+AGG | + | chr6_4:37919634-37919653 | Msa0987480:intron | 20.0% |
| !! | ATTATTTCATTGAGTTTAGT+TGG | + | chr6_4:37919674-37919693 | Msa0987480:intron | 20.0% |
| !! | AGGATTAAACAATAAAAATC+AGG | - | chr6_4:37920127-37920146 | None:intergenic | 20.0% |
| !! | ATAATTATAGCTTAAGAGTT+TGG | - | chr6_4:37920622-37920641 | None:intergenic | 20.0% |
| !! | TGGAAACTTATAATAAGAAA+AGG | + | chr6_4:37920793-37920812 | Msa0987480:CDS | 20.0% |
| ! | ATTAGGTACAAGTTTAGATT+TGG | + | chr6_4:37919651-37919670 | Msa0987480:intron | 25.0% |
| !!! | TGAGATATTATAGTCTTGTA+TGG | + | chr6_4:37919737-37919756 | Msa0987480:intron | 25.0% |
| ! | ATACTGAATTATGTCATTGT+CGG | - | chr6_4:37919828-37919847 | None:intergenic | 25.0% |
| ! | TTCAGTATAATCATATGTGT+CGG | + | chr6_4:37919840-37919859 | Msa0987480:intron | 25.0% |
| ! | ATATTCAGAGACTAAATTGA+TGG | - | chr6_4:37920054-37920073 | None:intergenic | 25.0% |
| ! | TTGATATCTAAGTCTTAGAT+AGG | + | chr6_4:37920210-37920229 | Msa0987480:intron | 25.0% |
| ! | TGATATCTAAGTCTTAGATA+GGG | + | chr6_4:37920211-37920230 | Msa0987480:intron | 25.0% |
| ! | AAATAGAAATCATGCACTTA+TGG | + | chr6_4:37920239-37920258 | Msa0987480:intron | 25.0% |
| ! | AATGGTAAATCGTTCAAAAT+AGG | + | chr6_4:37920312-37920331 | Msa0987480:intron | 25.0% |
| ! | ATTATAAGTTTCCAAATCGA+TGG | - | chr6_4:37920787-37920806 | None:intergenic | 25.0% |
| ! | ATTAGGTACAAGTTTAGATT+TGG | + | chr6_4:37919651-37919670 | Msa0987480:intron | 25.0% |
| !!! | TGAGATATTATAGTCTTGTA+TGG | + | chr6_4:37919737-37919756 | Msa0987480:intron | 25.0% |
| ! | ATACTGAATTATGTCATTGT+CGG | - | chr6_4:37919828-37919847 | None:intergenic | 25.0% |
| ! | TTCAGTATAATCATATGTGT+CGG | + | chr6_4:37919840-37919859 | Msa0987480:intron | 25.0% |
| ! | ATATTCAGAGACTAAATTGA+TGG | - | chr6_4:37920054-37920073 | None:intergenic | 25.0% |
| ! | TTGATATCTAAGTCTTAGAT+AGG | + | chr6_4:37920210-37920229 | Msa0987480:intron | 25.0% |
| ! | TGATATCTAAGTCTTAGATA+GGG | + | chr6_4:37920211-37920230 | Msa0987480:intron | 25.0% |
| ! | AAATAGAAATCATGCACTTA+TGG | + | chr6_4:37920239-37920258 | Msa0987480:intron | 25.0% |
| ! | AATGGTAAATCGTTCAAAAT+AGG | + | chr6_4:37920312-37920331 | Msa0987480:intron | 25.0% |
| ! | ATTATAAGTTTCCAAATCGA+TGG | - | chr6_4:37920787-37920806 | None:intergenic | 25.0% |
| ATAACAAAAGCTTCATCGTT+TGG | + | chr6_4:37919322-37919341 | Msa0987480:CDS | 30.0% | |
| ! | GAAATTGCTGTGTTTGAAAT+AGG | - | chr6_4:37919382-37919401 | None:intergenic | 30.0% |
| CTTCATCGAATTTCAATTAG+TGG | + | chr6_4:37919562-37919581 | Msa0987480:intron | 30.0% | |
| AAATTAAGACCTATGAAGCA+AGG | - | chr6_4:37919908-37919927 | None:intergenic | 30.0% | |
| ! | GCTTCATAGGTCTTAATTTT+CGG | + | chr6_4:37919909-37919928 | Msa0987480:intron | 30.0% |
| AAAAAAATTTCTGCAGCATC+TGG | + | chr6_4:37919991-37920010 | Msa0987480:intron | 30.0% | |
| TCTGAATATCACACTATTTC+CGG | + | chr6_4:37920065-37920084 | Msa0987480:intron | 30.0% | |
| ATATAGTTCAGGAACTAAAC+CGG | - | chr6_4:37920087-37920106 | None:intergenic | 30.0% | |
| GCACTTATGTAGAGATTTAA+TGG | + | chr6_4:37920294-37920313 | Msa0987480:intron | 30.0% | |
| ATCGTTCAAAATAGGTCTTA+TGG | + | chr6_4:37920320-37920339 | Msa0987480:intron | 30.0% | |
| !! | ATTTACGTGTGCTTTTTATC+AGG | + | chr6_4:37920395-37920414 | Msa0987480:intron | 30.0% |
| !! | TTTACGTGTGCTTTTTATCA+GGG | + | chr6_4:37920396-37920415 | Msa0987480:intron | 30.0% |
| AGATCAAAAACATCTTCTGA+CGG | + | chr6_4:37920473-37920492 | Msa0987480:CDS | 30.0% | |
| ATAACAAAAGCTTCATCGTT+TGG | + | chr6_4:37919322-37919341 | Msa0987480:CDS | 30.0% | |
| ! | GAAATTGCTGTGTTTGAAAT+AGG | - | chr6_4:37919382-37919401 | None:intergenic | 30.0% |
| CTTCATCGAATTTCAATTAG+TGG | + | chr6_4:37919562-37919581 | Msa0987480:intron | 30.0% | |
| AAATTAAGACCTATGAAGCA+AGG | - | chr6_4:37919908-37919927 | None:intergenic | 30.0% | |
| ! | GCTTCATAGGTCTTAATTTT+CGG | + | chr6_4:37919909-37919928 | Msa0987480:intron | 30.0% |
| AAAAAAATTTCTGCAGCATC+TGG | + | chr6_4:37919991-37920010 | Msa0987480:intron | 30.0% | |
| TCTGAATATCACACTATTTC+CGG | + | chr6_4:37920065-37920084 | Msa0987480:intron | 30.0% | |
| ATATAGTTCAGGAACTAAAC+CGG | - | chr6_4:37920087-37920106 | None:intergenic | 30.0% | |
| GCACTTATGTAGAGATTTAA+TGG | + | chr6_4:37920294-37920313 | Msa0987480:intron | 30.0% | |
| ATCGTTCAAAATAGGTCTTA+TGG | + | chr6_4:37920320-37920339 | Msa0987480:intron | 30.0% | |
| !! | ATTTACGTGTGCTTTTTATC+AGG | + | chr6_4:37920395-37920414 | Msa0987480:intron | 30.0% |
| !! | TTTACGTGTGCTTTTTATCA+GGG | + | chr6_4:37920396-37920415 | Msa0987480:intron | 30.0% |
| AGATCAAAAACATCTTCTGA+CGG | + | chr6_4:37920473-37920492 | Msa0987480:CDS | 30.0% | |
| ! | TCATACGTCTTCTGAAGAAA+CGG | - | chr6_4:37919255-37919274 | None:intergenic | 35.0% |
| ! | TGCTGTGTTTGAAATAGGTT+GGG | - | chr6_4:37919377-37919396 | None:intergenic | 35.0% |
| ! | TTGCTGTGTTTGAAATAGGT+TGG | - | chr6_4:37919378-37919397 | None:intergenic | 35.0% |
| !! | TTACATAGGTATTGAGCTGA+CGG | - | chr6_4:37919416-37919435 | None:intergenic | 35.0% |
| ! | TAGCGTGAATTGACTTACAT+AGG | - | chr6_4:37919430-37919449 | None:intergenic | 35.0% |
| GACATGAGAATGTTGAAAGA+TGG | + | chr6_4:37919713-37919732 | Msa0987480:intron | 35.0% | |
| ! | ATAGGTCTTAATTTTCGGTG+TGG | + | chr6_4:37919914-37919933 | Msa0987480:intron | 35.0% |
| !! | TAGGTCTTAATTTTCGGTGT+GGG | + | chr6_4:37919915-37919934 | Msa0987480:intron | 35.0% |
| AATCTCTACATAAGTGCATC+TGG | - | chr6_4:37920291-37920310 | None:intergenic | 35.0% | |
| AAAATCAGATCCTGATCGTT+GGG | + | chr6_4:37920425-37920444 | Msa0987480:CDS | 35.0% | |
| GCTTAAGAGTTTGGATTGAA+GGG | - | chr6_4:37920613-37920632 | None:intergenic | 35.0% | |
| AGCTTAAGAGTTTGGATTGA+AGG | - | chr6_4:37920614-37920633 | None:intergenic | 35.0% | |
| ! | TTTGCAGAACTTCTTTGAGA+AGG | + | chr6_4:37920713-37920732 | Msa0987480:CDS | 35.0% |
| !! | AATCGATGGATTCGATTTTG+CGG | - | chr6_4:37920773-37920792 | None:intergenic | 35.0% |
| ! | CAAAATCGAATCCATCGATT+TGG | + | chr6_4:37920773-37920792 | Msa0987480:CDS | 35.0% |
| ! | AGATTCTGAGAGAAATTGCA+AGG | - | chr6_4:37920876-37920895 | None:intergenic | 35.0% |
| TTCTCTCAGAATCTTTCTGA+AGG | + | chr6_4:37920882-37920901 | Msa0987480:CDS | 35.0% | |
| ! | AAGGAGTGAATGATGTGTTT+TGG | + | chr6_4:37920991-37921010 | Msa0987480:CDS | 35.0% |
| ! | AGGAGTGAATGATGTGTTTT+GGG | + | chr6_4:37920992-37921011 | Msa0987480:CDS | 35.0% |
| ! | TCATACGTCTTCTGAAGAAA+CGG | - | chr6_4:37919255-37919274 | None:intergenic | 35.0% |
| ! | TGCTGTGTTTGAAATAGGTT+GGG | - | chr6_4:37919377-37919396 | None:intergenic | 35.0% |
| ! | TTGCTGTGTTTGAAATAGGT+TGG | - | chr6_4:37919378-37919397 | None:intergenic | 35.0% |
| !! | TTACATAGGTATTGAGCTGA+CGG | - | chr6_4:37919416-37919435 | None:intergenic | 35.0% |
| ! | TAGCGTGAATTGACTTACAT+AGG | - | chr6_4:37919430-37919449 | None:intergenic | 35.0% |
| GACATGAGAATGTTGAAAGA+TGG | + | chr6_4:37919713-37919732 | Msa0987480:intron | 35.0% | |
| ! | ATAGGTCTTAATTTTCGGTG+TGG | + | chr6_4:37919914-37919933 | Msa0987480:intron | 35.0% |
| !! | TAGGTCTTAATTTTCGGTGT+GGG | + | chr6_4:37919915-37919934 | Msa0987480:intron | 35.0% |
| AATCTCTACATAAGTGCATC+TGG | - | chr6_4:37920291-37920310 | None:intergenic | 35.0% | |
| AAAATCAGATCCTGATCGTT+GGG | + | chr6_4:37920425-37920444 | Msa0987480:CDS | 35.0% | |
| GCTTAAGAGTTTGGATTGAA+GGG | - | chr6_4:37920613-37920632 | None:intergenic | 35.0% | |
| AGCTTAAGAGTTTGGATTGA+AGG | - | chr6_4:37920614-37920633 | None:intergenic | 35.0% | |
| ! | TTTGCAGAACTTCTTTGAGA+AGG | + | chr6_4:37920713-37920732 | Msa0987480:CDS | 35.0% |
| !! | AATCGATGGATTCGATTTTG+CGG | - | chr6_4:37920773-37920792 | None:intergenic | 35.0% |
| ! | CAAAATCGAATCCATCGATT+TGG | + | chr6_4:37920773-37920792 | Msa0987480:CDS | 35.0% |
| ! | AGATTCTGAGAGAAATTGCA+AGG | - | chr6_4:37920876-37920895 | None:intergenic | 35.0% |
| TTCTCTCAGAATCTTTCTGA+AGG | + | chr6_4:37920882-37920901 | Msa0987480:CDS | 35.0% | |
| ! | AAGGAGTGAATGATGTGTTT+TGG | + | chr6_4:37920991-37921010 | Msa0987480:CDS | 35.0% |
| ! | AGGAGTGAATGATGTGTTTT+GGG | + | chr6_4:37920992-37921011 | Msa0987480:CDS | 35.0% |
| TCTTCAGAAGACGTATGACA+TGG | + | chr6_4:37919257-37919276 | Msa0987480:CDS | 40.0% | |
| ! | TGTGAATTGGTGGGTGATTT+AGG | + | chr6_4:37919940-37919959 | Msa0987480:intron | 40.0% |
| !! | CATCTGGATCTTGGTAATGA+TGG | + | chr6_4:37920007-37920026 | Msa0987480:intron | 40.0% |
| GAAAATCAGATCCTGATCGT+TGG | + | chr6_4:37920424-37920443 | Msa0987480:CDS | 40.0% | |
| ! | TTCAGCTGGAAGATTTTCAG+CGG | + | chr6_4:37920658-37920677 | Msa0987480:CDS | 40.0% |
| !! | ATCGATGGATTCGATTTTGC+GGG | - | chr6_4:37920772-37920791 | None:intergenic | 40.0% |
| TAAGAAAAGGCGATTGTCTC+AGG | + | chr6_4:37920806-37920825 | Msa0987480:CDS | 40.0% | |
| TCTGAGAGAAATTGCAAGGA+AGG | - | chr6_4:37920872-37920891 | None:intergenic | 40.0% | |
| AACAGCATGGACTTTCAGTA+AGG | - | chr6_4:37921025-37921044 | None:intergenic | 40.0% | |
| TCTTCATTGTCTGAACAGCA+TGG | - | chr6_4:37921038-37921057 | None:intergenic | 40.0% | |
| ATGCTGTTCAGACAATGAAG+AGG | + | chr6_4:37921037-37921056 | Msa0987480:CDS | 40.0% | |
| TCTTCAGAAGACGTATGACA+TGG | + | chr6_4:37919257-37919276 | Msa0987480:CDS | 40.0% | |
| ! | TGTGAATTGGTGGGTGATTT+AGG | + | chr6_4:37919940-37919959 | Msa0987480:intron | 40.0% |
| !! | CATCTGGATCTTGGTAATGA+TGG | + | chr6_4:37920007-37920026 | Msa0987480:intron | 40.0% |
| GAAAATCAGATCCTGATCGT+TGG | + | chr6_4:37920424-37920443 | Msa0987480:CDS | 40.0% | |
| ! | TTCAGCTGGAAGATTTTCAG+CGG | + | chr6_4:37920658-37920677 | Msa0987480:CDS | 40.0% |
| !! | ATCGATGGATTCGATTTTGC+GGG | - | chr6_4:37920772-37920791 | None:intergenic | 40.0% |
| TAAGAAAAGGCGATTGTCTC+AGG | + | chr6_4:37920806-37920825 | Msa0987480:CDS | 40.0% | |
| TCTGAGAGAAATTGCAAGGA+AGG | - | chr6_4:37920872-37920891 | None:intergenic | 40.0% | |
| AACAGCATGGACTTTCAGTA+AGG | - | chr6_4:37921025-37921044 | None:intergenic | 40.0% | |
| TCTTCATTGTCTGAACAGCA+TGG | - | chr6_4:37921038-37921057 | None:intergenic | 40.0% | |
| ATGCTGTTCAGACAATGAAG+AGG | + | chr6_4:37921037-37921056 | Msa0987480:CDS | 40.0% | |
| GAAACGATCTCATCTGTGGT+GGG | - | chr6_4:37919291-37919310 | None:intergenic | 45.0% | |
| AGAAACGATCTCATCTGTGG+TGG | - | chr6_4:37919292-37919311 | None:intergenic | 45.0% | |
| CCAAGAAACGATCTCATCTG+TGG | - | chr6_4:37919295-37919314 | None:intergenic | 45.0% | |
| CCACAGATGAGATCGTTTCT+TGG | + | chr6_4:37919292-37919311 | Msa0987480:CDS | 45.0% | |
| TTCGTTGTTTGTGTCGTGTC+TGG | - | chr6_4:37919796-37919815 | None:intergenic | 45.0% | |
| TTTCTGCAGCATCTGGATCT+TGG | + | chr6_4:37919998-37920017 | Msa0987480:intron | 45.0% | |
| CGTAGACATCTCAAGCATCT+AGG | + | chr6_4:37920162-37920181 | Msa0987480:intron | 45.0% | |
| CTCTACATAAGTGCATCTGG+CGG | - | chr6_4:37920288-37920307 | None:intergenic | 45.0% | |
| GACTGTGGATAGGTTTCTTG+CGG | - | chr6_4:37920506-37920525 | None:intergenic | 45.0% | |
| GGATGACTATGACTGTGGAT+AGG | - | chr6_4:37920516-37920535 | None:intergenic | 45.0% | |
| TTCTGCTGCAGATCCAGAAA+GGG | + | chr6_4:37920542-37920561 | Msa0987480:CDS | 45.0% | |
| TGAGACAGAAAAGCTTCAGC+TGG | + | chr6_4:37920644-37920663 | Msa0987480:CDS | 45.0% | |
| ! | CTTCTTTGAGAAGGCTCTTC+AGG | + | chr6_4:37920722-37920741 | Msa0987480:CDS | 45.0% |
| GCGGGAAAGAAGTTCAACAA+TGG | - | chr6_4:37920754-37920773 | None:intergenic | 45.0% | |
| AAGGTCAACCAAGCTACCTT+CGG | - | chr6_4:37920853-37920872 | None:intergenic | 45.0% | |
| ! | CTTTCTGAAGGAGAACTGAC+AGG | + | chr6_4:37920894-37920913 | Msa0987480:CDS | 45.0% |
| ACATTACCTGAAGCCTCCTT+TGG | - | chr6_4:37920948-37920967 | None:intergenic | 45.0% | |
| GAAACGATCTCATCTGTGGT+GGG | - | chr6_4:37919291-37919310 | None:intergenic | 45.0% | |
| AGAAACGATCTCATCTGTGG+TGG | - | chr6_4:37919292-37919311 | None:intergenic | 45.0% | |
| CCAAGAAACGATCTCATCTG+TGG | - | chr6_4:37919295-37919314 | None:intergenic | 45.0% | |
| CCACAGATGAGATCGTTTCT+TGG | + | chr6_4:37919292-37919311 | Msa0987480:CDS | 45.0% | |
| TTCGTTGTTTGTGTCGTGTC+TGG | - | chr6_4:37919796-37919815 | None:intergenic | 45.0% | |
| TTTCTGCAGCATCTGGATCT+TGG | + | chr6_4:37919998-37920017 | Msa0987480:intron | 45.0% | |
| CGTAGACATCTCAAGCATCT+AGG | + | chr6_4:37920162-37920181 | Msa0987480:intron | 45.0% | |
| CTCTACATAAGTGCATCTGG+CGG | - | chr6_4:37920288-37920307 | None:intergenic | 45.0% | |
| GACTGTGGATAGGTTTCTTG+CGG | - | chr6_4:37920506-37920525 | None:intergenic | 45.0% | |
| GGATGACTATGACTGTGGAT+AGG | - | chr6_4:37920516-37920535 | None:intergenic | 45.0% | |
| TTCTGCTGCAGATCCAGAAA+GGG | + | chr6_4:37920542-37920561 | Msa0987480:CDS | 45.0% | |
| TGAGACAGAAAAGCTTCAGC+TGG | + | chr6_4:37920644-37920663 | Msa0987480:CDS | 45.0% | |
| ! | CTTCTTTGAGAAGGCTCTTC+AGG | + | chr6_4:37920722-37920741 | Msa0987480:CDS | 45.0% |
| GCGGGAAAGAAGTTCAACAA+TGG | - | chr6_4:37920754-37920773 | None:intergenic | 45.0% | |
| AAGGTCAACCAAGCTACCTT+CGG | - | chr6_4:37920853-37920872 | None:intergenic | 45.0% | |
| ! | CTTTCTGAAGGAGAACTGAC+AGG | + | chr6_4:37920894-37920913 | Msa0987480:CDS | 45.0% |
| ACATTACCTGAAGCCTCCTT+TGG | - | chr6_4:37920948-37920967 | None:intergenic | 45.0% | |
| ! | GCAGTGGCTGATGATGATTG+TGG | - | chr6_4:37919204-37919223 | None:intergenic | 50.0% |
| CATACCTTCTCTGCTTCCGT+CGG | - | chr6_4:37919229-37919248 | None:intergenic | 50.0% | |
| GAACGCGAGAGAATTCAGGA+GGG | - | chr6_4:37919350-37919369 | None:intergenic | 50.0% | |
| AGAACGCGAGAGAATTCAGG+AGG | - | chr6_4:37919351-37919370 | None:intergenic | 50.0% | |
| AGCAGAACGCGAGAGAATTC+AGG | - | chr6_4:37919354-37919373 | None:intergenic | 50.0% | |
| ! | ATTGAGCTGACGGATGAAGC+TGG | - | chr6_4:37919406-37919425 | None:intergenic | 50.0% |
| TCCTCAGATTAGGTGTGTCC+TGG | - | chr6_4:37919881-37919900 | None:intergenic | 50.0% | |
| GCAAGGACACTCCTCAGATT+AGG | - | chr6_4:37919891-37919910 | None:intergenic | 50.0% | |
| !! | GAGGAGTGTCCTTGCTTCAT+AGG | + | chr6_4:37919896-37919915 | Msa0987480:intron | 50.0% |
| ! | TTCGGTGTGGGTGTGTGAAT+TGG | + | chr6_4:37919927-37919946 | Msa0987480:intron | 50.0% |
| GTGTGGGTGTGTGAATTGGT+GGG | + | chr6_4:37919931-37919950 | Msa0987480:intron | 50.0% | |
| CTACGATGCAGAAGAGAAGC+AGG | - | chr6_4:37920147-37920166 | None:intergenic | 50.0% | |
| ACATAAGTGCATCTGGCGGT+GGG | - | chr6_4:37920284-37920303 | None:intergenic | 50.0% | |
| TACATAAGTGCATCTGGCGG+TGG | - | chr6_4:37920285-37920304 | None:intergenic | 50.0% | |
| TTGGCAAACTCCCAACGATC+AGG | - | chr6_4:37920438-37920457 | None:intergenic | 50.0% | |
| CCACAGTCATAGTCATCCTC+CGG | + | chr6_4:37920518-37920537 | Msa0987480:CDS | 50.0% | |
| CACAGTCATAGTCATCCTCC+GGG | + | chr6_4:37920519-37920538 | Msa0987480:CDS | 50.0% | |
| GTTCTGCTGCAGATCCAGAA+AGG | + | chr6_4:37920541-37920560 | Msa0987480:CDS | 50.0% | |
| AGATCCAGAAAGGGCAGCAT+TGG | + | chr6_4:37920551-37920570 | Msa0987480:CDS | 50.0% | |
| TTCTCCAATGCTGCCCTTTC+TGG | - | chr6_4:37920558-37920577 | None:intergenic | 50.0% | |
| ! | GGAAGATTTTCAGCGGCGAT+TGG | + | chr6_4:37920665-37920684 | Msa0987480:CDS | 50.0% |
| ! | GATTTTCAGCGGCGATTGGA+AGG | + | chr6_4:37920669-37920688 | Msa0987480:CDS | 50.0% |
| ! | GATTGGAAGGCATGGAGAAG+AGG | + | chr6_4:37920682-37920701 | Msa0987480:CDS | 50.0% |
| TGAAGCCTCCTTTGGATCAG+CGG | - | chr6_4:37920940-37920959 | None:intergenic | 50.0% | |
| ! | GCAGTGGCTGATGATGATTG+TGG | - | chr6_4:37919204-37919223 | None:intergenic | 50.0% |
| CATACCTTCTCTGCTTCCGT+CGG | - | chr6_4:37919229-37919248 | None:intergenic | 50.0% | |
| GAACGCGAGAGAATTCAGGA+GGG | - | chr6_4:37919350-37919369 | None:intergenic | 50.0% | |
| AGAACGCGAGAGAATTCAGG+AGG | - | chr6_4:37919351-37919370 | None:intergenic | 50.0% | |
| AGCAGAACGCGAGAGAATTC+AGG | - | chr6_4:37919354-37919373 | None:intergenic | 50.0% | |
| ! | ATTGAGCTGACGGATGAAGC+TGG | - | chr6_4:37919406-37919425 | None:intergenic | 50.0% |
| TCCTCAGATTAGGTGTGTCC+TGG | - | chr6_4:37919881-37919900 | None:intergenic | 50.0% | |
| GCAAGGACACTCCTCAGATT+AGG | - | chr6_4:37919891-37919910 | None:intergenic | 50.0% | |
| !! | GAGGAGTGTCCTTGCTTCAT+AGG | + | chr6_4:37919896-37919915 | Msa0987480:intron | 50.0% |
| ! | TTCGGTGTGGGTGTGTGAAT+TGG | + | chr6_4:37919927-37919946 | Msa0987480:intron | 50.0% |
| GTGTGGGTGTGTGAATTGGT+GGG | + | chr6_4:37919931-37919950 | Msa0987480:intron | 50.0% | |
| CTACGATGCAGAAGAGAAGC+AGG | - | chr6_4:37920147-37920166 | None:intergenic | 50.0% | |
| ACATAAGTGCATCTGGCGGT+GGG | - | chr6_4:37920284-37920303 | None:intergenic | 50.0% | |
| TACATAAGTGCATCTGGCGG+TGG | - | chr6_4:37920285-37920304 | None:intergenic | 50.0% | |
| TTGGCAAACTCCCAACGATC+AGG | - | chr6_4:37920438-37920457 | None:intergenic | 50.0% | |
| CCACAGTCATAGTCATCCTC+CGG | + | chr6_4:37920518-37920537 | Msa0987480:CDS | 50.0% | |
| CACAGTCATAGTCATCCTCC+GGG | + | chr6_4:37920519-37920538 | Msa0987480:CDS | 50.0% | |
| GTTCTGCTGCAGATCCAGAA+AGG | + | chr6_4:37920541-37920560 | Msa0987480:CDS | 50.0% | |
| AGATCCAGAAAGGGCAGCAT+TGG | + | chr6_4:37920551-37920570 | Msa0987480:CDS | 50.0% | |
| TTCTCCAATGCTGCCCTTTC+TGG | - | chr6_4:37920558-37920577 | None:intergenic | 50.0% | |
| ! | GGAAGATTTTCAGCGGCGAT+TGG | + | chr6_4:37920665-37920684 | Msa0987480:CDS | 50.0% |
| ! | GATTTTCAGCGGCGATTGGA+AGG | + | chr6_4:37920669-37920688 | Msa0987480:CDS | 50.0% |
| ! | GATTGGAAGGCATGGAGAAG+AGG | + | chr6_4:37920682-37920701 | Msa0987480:CDS | 50.0% |
| TGAAGCCTCCTTTGGATCAG+CGG | - | chr6_4:37920940-37920959 | None:intergenic | 50.0% | |
| CGACGGAAGCAGAGAAGGTA+TGG | + | chr6_4:37919227-37919246 | Msa0987480:CDS | 55.0% | |
| GATTAGGTGTGTCCTGGCGT+CGG | - | chr6_4:37919875-37919894 | None:intergenic | 55.0% | |
| GCCAGGACACACCTAATCTG+AGG | + | chr6_4:37919877-37919896 | Msa0987480:intron | 55.0% | |
| GGTGTGGGTGTGTGAATTGG+TGG | + | chr6_4:37919930-37919949 | Msa0987480:intron | 55.0% | |
| CATAAGTGCATCTGGCGGTG+GGG | - | chr6_4:37920283-37920302 | None:intergenic | 55.0% | |
| CCGGAGGATGACTATGACTG+TGG | - | chr6_4:37920521-37920540 | None:intergenic | 55.0% | |
| TCTGGATCTGCAGCAGAACC+CGG | - | chr6_4:37920540-37920559 | None:intergenic | 55.0% | |
| ACCAAGCTACCTTCGGCAAC+AGG | - | chr6_4:37920846-37920865 | None:intergenic | 55.0% | |
| AACTGACCCCGCTGATCCAA+AGG | + | chr6_4:37920929-37920948 | Msa0987480:CDS | 55.0% | |
| AAGCCTCCTTTGGATCAGCG+GGG | - | chr6_4:37920938-37920957 | None:intergenic | 55.0% | |
| GAAGCCTCCTTTGGATCAGC+GGG | - | chr6_4:37920939-37920958 | None:intergenic | 55.0% | |
| GCTGATCCAAAGGAGGCTTC+AGG | + | chr6_4:37920939-37920958 | Msa0987480:CDS | 55.0% | |
| TCCAAGTCGAAGCAGCTGCT+CGG | + | chr6_4:37920967-37920986 | Msa0987480:CDS | 55.0% | |
| CGACGGAAGCAGAGAAGGTA+TGG | + | chr6_4:37919227-37919246 | Msa0987480:CDS | 55.0% | |
| GATTAGGTGTGTCCTGGCGT+CGG | - | chr6_4:37919875-37919894 | None:intergenic | 55.0% | |
| GCCAGGACACACCTAATCTG+AGG | + | chr6_4:37919877-37919896 | Msa0987480:intron | 55.0% | |
| GGTGTGGGTGTGTGAATTGG+TGG | + | chr6_4:37919930-37919949 | Msa0987480:intron | 55.0% | |
| CATAAGTGCATCTGGCGGTG+GGG | - | chr6_4:37920283-37920302 | None:intergenic | 55.0% | |
| CCGGAGGATGACTATGACTG+TGG | - | chr6_4:37920521-37920540 | None:intergenic | 55.0% | |
| TCTGGATCTGCAGCAGAACC+CGG | - | chr6_4:37920540-37920559 | None:intergenic | 55.0% | |
| ACCAAGCTACCTTCGGCAAC+AGG | - | chr6_4:37920846-37920865 | None:intergenic | 55.0% | |
| AACTGACCCCGCTGATCCAA+AGG | + | chr6_4:37920929-37920948 | Msa0987480:CDS | 55.0% | |
| AAGCCTCCTTTGGATCAGCG+GGG | - | chr6_4:37920938-37920957 | None:intergenic | 55.0% | |
| GAAGCCTCCTTTGGATCAGC+GGG | - | chr6_4:37920939-37920958 | None:intergenic | 55.0% | |
| GCTGATCCAAAGGAGGCTTC+AGG | + | chr6_4:37920939-37920958 | Msa0987480:CDS | 55.0% | |
| TCCAAGTCGAAGCAGCTGCT+CGG | + | chr6_4:37920967-37920986 | Msa0987480:CDS | 55.0% | |
| TCATCAGCCACTGCTGCCGA+CGG | + | chr6_4:37919210-37919229 | Msa0987480:CDS | 60.0% | |
| TCAGCGGCGATTGGAAGGCA+TGG | + | chr6_4:37920674-37920693 | Msa0987480:CDS | 60.0% | |
| CACATGCAGCCTGTTGCCGA+AGG | + | chr6_4:37920834-37920853 | Msa0987480:CDS | 60.0% | |
| GCCTGTTGCCGAAGGTAGCT+TGG | + | chr6_4:37920842-37920861 | Msa0987480:CDS | 60.0% | |
| TGACCCCGCTGATCCAAAGG+AGG | + | chr6_4:37920932-37920951 | Msa0987480:CDS | 60.0% | |
| TCATCAGCCACTGCTGCCGA+CGG | + | chr6_4:37919210-37919229 | Msa0987480:CDS | 60.0% | |
| TCAGCGGCGATTGGAAGGCA+TGG | + | chr6_4:37920674-37920693 | Msa0987480:CDS | 60.0% | |
| CACATGCAGCCTGTTGCCGA+AGG | + | chr6_4:37920834-37920853 | Msa0987480:CDS | 60.0% | |
| GCCTGTTGCCGAAGGTAGCT+TGG | + | chr6_4:37920842-37920861 | Msa0987480:CDS | 60.0% | |
| TGACCCCGCTGATCCAAAGG+AGG | + | chr6_4:37920932-37920951 | Msa0987480:CDS | 60.0% | |
| TCTGCTTCCGTCGGCAGCAG+TGG | - | chr6_4:37919220-37919239 | None:intergenic | 65.0% | |
| GCTGCCGACGGAAGCAGAGA+AGG | + | chr6_4:37919222-37919241 | Msa0987480:CDS | 65.0% | |
| ! | CGGTGTTAGACACCGACGCC+AGG | + | chr6_4:37919860-37919879 | Msa0987480:intron | 65.0% |
| GGATCTGCAGCAGAACCCGG+AGG | - | chr6_4:37920537-37920556 | None:intergenic | 65.0% | |
| GCCGAGCAGCTGCTTCGACT+TGG | - | chr6_4:37920971-37920990 | None:intergenic | 65.0% | |
| GTCGAAGCAGCTGCTCGGCA+AGG | + | chr6_4:37920972-37920991 | Msa0987480:CDS | 65.0% | |
| TCTGCTTCCGTCGGCAGCAG+TGG | - | chr6_4:37919220-37919239 | None:intergenic | 65.0% | |
| GCTGCCGACGGAAGCAGAGA+AGG | + | chr6_4:37919222-37919241 | Msa0987480:CDS | 65.0% | |
| ! | CGGTGTTAGACACCGACGCC+AGG | + | chr6_4:37919860-37919879 | Msa0987480:intron | 65.0% |
| GGATCTGCAGCAGAACCCGG+AGG | - | chr6_4:37920537-37920556 | None:intergenic | 65.0% | |
| GCCGAGCAGCTGCTTCGACT+TGG | - | chr6_4:37920971-37920990 | None:intergenic | 65.0% | |
| GTCGAAGCAGCTGCTCGGCA+AGG | + | chr6_4:37920972-37920991 | Msa0987480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 37919189 | 37921073 | 37919189 | ID=Msa0987480;Name=Msa0987480 |
| chr6_4 | mRNA | 37919189 | 37921073 | 37919189 | ID=Msa0987480-mRNA-1;Parent=Msa0987480;Name=Msa0987480-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|299 |
| chr6_4 | exon | 37919189 | 37919431 | 37919189 | ID=Msa0987480-mRNA-1:exon:9403;Parent=Msa0987480-mRNA-1 |
| chr6_4 | exon | 37920417 | 37921073 | 37920417 | ID=Msa0987480-mRNA-1:exon:9404;Parent=Msa0987480-mRNA-1 |
| chr6_4 | CDS | 37919189 | 37919431 | 37919189 | ID=Msa0987480-mRNA-1:cds;Parent=Msa0987480-mRNA-1 |
| chr6_4 | CDS | 37920417 | 37921073 | 37920417 | ID=Msa0987480-mRNA-1:cds;Parent=Msa0987480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
