AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0988910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988910 MtrunA17_Chr6g0470151 82.320 362 54 1 1 362 1 352 7.44e-160 460
Msa0988910 MtrunA17_Chr2g0289181 48.498 233 120 0 327 559 1 233 3.92e-73 233
Msa0988910 MtrunA17_Chr6g0470161 80.000 125 20 1 435 559 1 120 3.81e-62 200
Msa0988910 MtrunA17_Chr7g0266611 50.303 165 81 1 395 559 2 165 8.11e-36 131
Msa0988910 MtrunA17_Chr1g0202461 41.600 125 62 3 291 415 222 335 5.73e-26 110
Msa0988910 MtrunA17_Chr8g0366921 49.462 186 77 5 1 180 1 175 7.32e-26 108
Msa0988910 MtrunA17_Chr8g0348311 41.739 115 55 3 300 414 126 228 1.47e-21 96.3
Msa0988910 MtrunA17_Chr7g0248691 42.342 111 55 2 312 414 118 227 3.12e-21 95.1
Msa0988910 MtrunA17_Chr7g0270051 42.574 101 52 1 319 419 38 132 3.16e-19 87.8
Msa0988910 MtrunA17_Chr2g0293481 48.052 77 39 1 341 417 268 343 3.49e-18 87.4
Msa0988910 MtrunA17_Chr8g0387501 41.905 105 51 3 341 439 130 230 3.66e-18 84.7
Msa0988910 MtrunA17_Chr7g0238921 41.509 106 50 3 292 397 87 180 5.79e-17 82.0
Msa0988910 MtrunA17_Chr2g0319961 50.794 63 31 0 341 403 81 143 2.84e-15 76.3
Msa0988910 MtrunA17_Chr8g0379461 47.619 63 33 0 341 403 77 139 3.93e-15 75.5
Msa0988910 MtrunA17_Chr1g0184691 50.000 68 31 1 335 399 285 352 4.06e-15 77.0
Msa0988910 MtrunA17_Chr2g0284321 50.000 60 30 0 341 400 36 95 5.08e-15 74.3
Msa0988910 MtrunA17_Chr4g0053281 51.613 62 30 0 341 402 267 328 5.62e-15 76.6
Msa0988910 MtrunA17_Chr5g0401821 56.140 57 25 0 341 397 200 256 5.99e-15 75.5
Msa0988910 MtrunA17_Chr2g0293901 45.238 168 77 4 1 168 1 153 8.08e-15 73.6
Msa0988910 MtrunA17_Chr4g0071521 42.353 85 46 1 316 397 218 302 2.81e-14 73.9
Msa0988910 MtrunA17_Chr4g0042831 39.785 93 51 2 338 426 276 367 3.12e-14 74.7
Msa0988910 MtrunA17_Chr7g0218081 43.939 66 36 1 338 403 408 472 4.24e-14 75.1
Msa0988910 MtrunA17_Chr7g0218081 43.077 65 35 2 336 400 224 286 9.40e-11 64.3
Msa0988910 MtrunA17_Chr7g0228941 42.647 68 39 0 334 401 46 113 6.79e-14 68.6
Msa0988910 MtrunA17_Chr3g0139021 37.778 90 55 1 309 397 282 371 9.30e-14 73.2
Msa0988910 MtrunA17_Chr1g0147881 39.474 76 46 0 334 409 256 331 1.70e-13 72.0
Msa0988910 MtrunA17_Chr5g0418191 43.478 69 38 1 338 406 318 385 2.02e-13 72.4
Msa0988910 MtrunA17_Chr8g0387981 36.957 92 52 2 310 395 98 189 2.98e-13 71.6
Msa0988910 MtrunA17_Chr7g0263531 34.653 101 64 2 300 400 322 420 2.44e-12 69.3
Msa0988910 MtrunA17_Chr2g0302391 35.484 93 47 2 321 400 179 271 2.77e-12 68.9
Msa0988910 MtrunA17_Chr7g0249311 46.377 69 35 2 332 400 171 237 2.81e-12 69.7
Msa0988910 MtrunA17_Chr7g0249311 42.424 66 37 1 340 405 392 456 6.03e-12 68.6
Msa0988910 MtrunA17_Chr3g0129321 39.130 69 39 3 337 404 115 181 5.33e-12 65.5
Msa0988910 MtrunA17_Chr3g0136961 40.476 84 49 1 315 397 112 195 5.39e-12 67.0
Msa0988910 MtrunA17_Chr4g0051881 45.902 61 32 1 340 400 178 237 6.44e-12 67.0
Msa0988910 MtrunA17_Chr4g0074001 30.702 114 73 3 291 403 313 421 6.83e-12 68.2
Msa0988910 MtrunA17_Chr3g0079691 50.000 62 29 2 339 400 279 338 7.20e-12 68.2
Msa0988910 MtrunA17_Chr3g0079691 39.062 64 38 1 340 403 495 557 2.15e-11 66.6
Msa0988910 MtrunA17_Chr5g0443131 46.774 62 32 1 340 401 157 217 8.18e-12 66.6
Msa0988910 MtrunA17_Chr4g0001361 42.169 83 47 1 335 416 157 239 8.85e-12 66.6
Msa0988910 MtrunA17_Chr7g0243891 48.529 68 33 2 333 400 209 274 1.17e-11 67.4
Msa0988910 MtrunA17_Chr7g0249301 42.188 64 36 1 340 403 292 354 1.20e-11 66.6
Msa0988910 MtrunA17_Chr5g0445311 38.806 67 40 1 340 406 364 429 2.00e-11 66.6
Msa0988910 MtrunA17_Chr3g0101131 38.806 67 40 1 340 406 415 480 2.04e-11 66.6
Msa0988910 MtrunA17_Chr1g0194481 40.000 70 41 1 340 409 158 226 3.89e-11 64.7
Msa0988910 MtrunA17_Chr8g0368721 46.277 188 85 4 1 187 1 173 4.87e-11 64.3
Msa0988910 MtrunA17_Chr3g0099641 36.000 75 47 1 326 400 238 311 5.11e-11 65.1
Msa0988910 MtrunA17_Chr2g0333851 43.750 64 36 0 338 401 167 230 6.43e-11 63.9
Msa0988910 MtrunA17_Chr7g0266621 46.154 91 42 1 1 91 1 84 7.89e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988910 AT5G52830.1 48.485 99 49 2 317 415 143 239 2.89e-23 101
Msa0988910 AT4G01250.1 34.868 152 91 3 284 430 74 222 4.38e-21 94.4
Msa0988910 AT4G23550.1 45.349 86 46 1 332 417 132 216 4.67e-19 88.6
Msa0988910 AT1G30650.1 35.333 150 93 1 294 443 175 320 2.56e-17 85.1
Msa0988910 AT2G34830.1 50.725 69 33 1 341 409 216 283 5.46e-17 84.0
Msa0988910 AT2G34830.2 50.725 69 33 1 341 409 225 292 6.36e-17 84.0
Msa0988910 AT5G45050.4 38.182 110 66 2 300 409 1002 1109 4.30e-16 82.4
Msa0988910 AT5G28650.1 40.217 92 52 1 311 399 230 321 4.64e-16 80.1
Msa0988910 AT5G45050.1 38.182 110 66 2 300 409 1141 1248 4.81e-16 82.4
Msa0988910 AT3G04670.1 35.593 118 62 3 285 399 215 321 5.08e-16 80.1
Msa0988910 AT5G45050.2 38.182 110 66 2 300 409 1113 1220 5.31e-16 82.4
Msa0988910 AT2G23320.1 42.353 85 46 1 316 397 213 297 1.58e-15 78.2
Msa0988910 AT4G31550.2 33.607 122 58 3 302 405 194 310 1.02e-14 75.9
Msa0988910 AT4G31550.1 33.333 123 58 3 302 405 194 311 1.32e-14 75.5
Msa0988910 AT3G58710.2 46.970 66 35 0 341 406 71 136 2.61e-14 73.9
Msa0988910 AT3G58710.1 46.970 66 35 0 341 406 72 137 2.62e-14 73.9
Msa0988910 AT4G24240.1 41.176 85 47 1 316 397 254 338 2.65e-14 75.1
Msa0988910 AT2G24570.1 35.714 98 44 2 321 399 205 302 4.93e-14 73.9
Msa0988910 AT1G29280.1 48.333 60 31 0 341 400 75 134 7.08e-14 72.4
Msa0988910 AT2G03340.1 43.478 69 38 1 338 406 413 480 1.69e-13 73.6
Msa0988910 AT2G30590.1 38.636 88 46 1 312 399 293 372 7.28e-13 70.9
Msa0988910 AT5G43290.1 41.096 73 42 1 325 397 99 170 9.94e-13 69.3
Msa0988910 AT3G01080.2 42.857 63 35 1 338 400 342 403 1.39e-12 70.5
Msa0988910 AT3G01080.1 42.857 63 35 1 338 400 304 365 1.43e-12 70.1
Msa0988910 AT1G80840.1 45.161 62 34 0 340 401 146 207 1.89e-12 68.9
Msa0988910 AT2G04880.2 44.444 63 34 1 341 403 284 345 3.92e-12 68.9
Msa0988910 AT2G04880.1 44.444 63 34 1 341 403 308 369 4.33e-12 68.9
Msa0988910 AT5G07100.1 46.970 66 34 1 335 400 112 176 4.96e-12 67.8
Msa0988910 AT5G07100.2 46.970 66 34 1 335 400 19 83 5.79e-12 65.9
Msa0988910 AT5G07100.4 46.970 66 34 1 335 400 19 83 5.79e-12 65.9
Msa0988910 AT5G07100.5 46.970 66 34 1 335 400 19 83 5.79e-12 65.9
Msa0988910 AT5G07100.3 46.970 66 34 1 335 400 19 83 5.79e-12 65.9
Msa0988910 AT5G45260.1 41.538 65 36 1 341 403 1209 1273 7.94e-12 68.9
Msa0988910 AT1G13960.1 42.857 63 35 1 338 400 407 468 9.20e-12 68.2
Msa0988910 AT1G13960.2 42.857 63 35 1 338 400 254 315 9.89e-12 67.0
Msa0988910 AT4G26640.7 41.026 78 43 3 338 414 169 244 1.59e-11 67.4
Msa0988910 AT4G31800.2 42.667 75 40 1 340 411 111 185 1.78e-11 65.1
Msa0988910 AT4G26640.2 41.026 78 43 3 338 414 209 284 1.93e-11 67.0
Msa0988910 AT4G26640.1 41.026 78 43 3 338 414 137 212 2.00e-11 67.0
Msa0988910 AT4G26640.5 41.026 78 43 3 338 414 33 108 2.24e-11 66.2
Msa0988910 AT4G26640.6 41.026 78 43 3 338 414 33 108 2.24e-11 66.2
Msa0988910 AT4G26640.4 41.026 78 43 3 338 414 33 108 2.24e-11 66.2
Msa0988910 AT4G26640.3 41.026 78 43 3 338 414 33 108 2.24e-11 66.2
Msa0988910 AT4G30935.1 31.034 116 74 4 289 403 283 393 2.44e-11 66.6
Msa0988910 AT4G31800.1 42.667 75 40 1 340 411 176 250 4.35e-11 64.7
Msa0988910 AT1G29860.1 43.548 62 34 1 340 401 136 196 4.46e-11 64.3
Msa0988910 AT2G25000.2 45.902 61 33 0 340 400 103 163 5.18e-11 63.2
Msa0988910 AT2G25000.4 45.902 61 33 0 340 400 103 163 5.18e-11 63.2
Msa0988910 AT2G25000.3 45.902 61 33 0 340 400 125 185 5.39e-11 63.5
Msa0988910 AT5G56270.1 39.062 64 38 1 340 403 487 549 5.59e-11 65.9
Msa0988910 AT2G21900.1 45.161 62 33 1 340 401 109 169 6.48e-11 62.4
Msa0988910 AT4G18170.1 44.828 58 31 1 340 397 172 228 7.65e-11 63.9
Msa0988910 AT2G37260.3 43.103 58 32 1 340 397 269 325 8.63e-11 64.3
Msa0988910 AT2G37260.2 43.103 58 32 1 340 397 267 323 8.83e-11 64.3

Find 143 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCAGAAAACAAACTTAT+TGG 0.119694 6_4:-43774772 Msa0988910:CDS
TTTCTCTAGCAGCAGGTAAA+TGG 0.191301 6_4:+43774908 None:intergenic
ATAAGTTCAGTTTCTGAATA+AGG 0.191932 6_4:+43774937 None:intergenic
TTGAGGAGATATGACATTAT+TGG 0.264254 6_4:+43776939 None:intergenic
GTTGGGATAGTGGTGGTAAT+TGG 0.266737 6_4:+43776769 None:intergenic
TGTGATTGATTGAGCTTTCT+TGG 0.276762 6_4:+43776211 None:intergenic
TGGTGGTCGTGGACAAAATA+TGG 0.290490 6_4:-43775945 Msa0988910:CDS
TAGTCTTTGATGACTTGTTC+TGG 0.291346 6_4:+43775091 None:intergenic
TATGTCAGAGGATTTCTTAT+TGG 0.311118 6_4:-43774704 Msa0988910:CDS
TAAGTTCAGTTTCTGAATAA+GGG 0.317166 6_4:+43774938 None:intergenic
GGTACGAGGATTGAAATTAT+TGG 0.325131 6_4:+43776513 None:intergenic
TTGGTAGGCGTGGGGTTAAC+AGG 0.331361 6_4:+43776532 None:intergenic
TAGTGGTGGTTGAAGGGGTT+TGG 0.351715 6_4:+43776707 None:intergenic
GTGATTGATTGAGCTTTCTT+GGG 0.361329 6_4:+43776212 None:intergenic
AACATCATCACTAGTGTTCA+TGG 0.367859 6_4:-43776358 Msa0988910:CDS
AGTCTTTGATGACTTGTTCT+GGG 0.370924 6_4:+43775092 None:intergenic
CTCCAATGGACATTGACAAA+TGG 0.371471 6_4:-43777077 None:intergenic
CAAACAAGCTTTCAGAAGAT+TGG 0.373192 6_4:-43775965 Msa0988910:CDS
TTGGTGTTTGAGATGGAGAT+GGG 0.375368 6_4:+43776986 None:intergenic
GGGTTTGGATAATAGTGATT+GGG 0.385706 6_4:+43776722 None:intergenic
TCATGGGAGTCAGTCTAGTT+GGG 0.386838 6_4:+43776473 None:intergenic
GCAAAACATAATTCAAGAAT+CGG 0.387484 6_4:-43776133 Msa0988910:CDS
TTGGGATAGTGGTGGTAATT+GGG 0.391646 6_4:+43776770 None:intergenic
GGTGGAGGTGGTGGTGATAG+TGG 0.392003 6_4:+43776963 None:intergenic
TCGGGAATAGTGGTGGTTGA+AGG 0.400113 6_4:+43776700 None:intergenic
ATTATTGGTGGTGGAGGTGG+TGG 0.403407 6_4:+43776954 None:intergenic
GTCATGGGAGTCAGTCTAGT+TGG 0.405382 6_4:+43776472 None:intergenic
AATTAACAACAAGGTAACTT+TGG 0.407679 6_4:-43776003 Msa0988910:CDS
GACATTATTGGTGGTGGAGG+TGG 0.407766 6_4:+43776951 None:intergenic
GTCAAGTTGGTGGTGGAGCT+AGG 0.407770 6_4:+43776382 None:intergenic
ATGGAGAGAGGTGGTGGGAT+TGG 0.408785 6_4:+43776801 None:intergenic
AATTACCCAACACCAGATCT+AGG 0.412137 6_4:-43776183 Msa0988910:CDS
AAGGAACAGGGTTATTGTCT+TGG 0.412589 6_4:+43776878 None:intergenic
GAACCCAGCTTTGAAATGTT+TGG 0.416902 6_4:+43775036 None:intergenic
GTGATTCACCGGAGTAATCA+TGG 0.421109 6_4:+43774803 None:intergenic
ATTCCCGACCACATAACATT+TGG 0.422243 6_4:-43776685 Msa0988910:CDS
CAACAAGAAATGCAATCAAA+TGG 0.425635 6_4:-43776589 Msa0988910:CDS
AGGAACAGGGTTATTGTCTT+GGG 0.439157 6_4:+43776879 None:intergenic
CACAACAAAAGTGTCCTCTT+TGG 0.441667 6_4:+43775179 None:intergenic
TCCAATGGACATTGACAAAT+GGG 0.445247 6_4:-43777076 None:intergenic
AACACTTGACTGTTATTGTT+TGG 0.445737 6_4:+43776274 None:intergenic
AGTGGTGGTAATTGGGATGG+GGG 0.446335 6_4:+43776777 None:intergenic
TGTAATGAAGGTTGGGATAG+TGG 0.449196 6_4:+43776759 None:intergenic
GTCACCAAACATTTCAAAGC+TGG 0.449524 6_4:-43775040 Msa0988910:CDS
TTCTCTAGCAGCAGGTAAAT+GGG 0.451842 6_4:+43774909 None:intergenic
ACTTGAATATTCCTGCTCTC+TGG 0.454557 6_4:+43774982 None:intergenic
GTTGGTGTTTGAGATGGAGA+TGG 0.454612 6_4:+43776985 None:intergenic
GCAGGTAAATGGAACTCTAT+TGG 0.471063 6_4:-43775123 Msa0988910:CDS
GGGGTTTGGATAATAGTGAT+TGG 0.471326 6_4:+43776721 None:intergenic
ATTTGGTAAAATCCTAGATC+TGG 0.472878 6_4:+43776171 None:intergenic
ATAGTGGTGGTAATTGGGAT+GGG 0.473274 6_4:+43776775 None:intergenic
TGAAGTGGTTGTTGTAATGA+AGG 0.473451 6_4:+43776747 None:intergenic
TAGTGGTGGTAATTGGGATG+GGG 0.474532 6_4:+43776776 None:intergenic
CGGGAATAGTGGTGGTTGAA+GGG 0.475763 6_4:+43776701 None:intergenic
AGATATGACATTATTGGTGG+TGG 0.477605 6_4:+43776945 None:intergenic
GTACCAAATGTTATGTGGTC+GGG 0.477811 6_4:+43776682 None:intergenic
TCCCATTTGTCAATGTCCAT+TGG 0.485177 6_4:+43777075 None:intergenic
TGGTTGTTGTAATGAAGGTT+GGG 0.486986 6_4:+43776752 None:intergenic
ATAGAGTTCCATTTACCTGC+TGG 0.487185 6_4:+43775126 None:intergenic
CAAAACATAATTCAAGAATC+GGG 0.489328 6_4:-43776132 Msa0988910:intron
TCATGGGCATTGCTACTCAT+TGG 0.492500 6_4:+43774820 None:intergenic
TGTTATGTGGTCGGGAATAG+TGG 0.492886 6_4:+43776690 None:intergenic
GATTCAATTTCTCTAGCAGC+AGG 0.497334 6_4:+43774901 None:intergenic
GTGGTTGTTGTAATGAAGGT+TGG 0.498936 6_4:+43776751 None:intergenic
GAAGGTGTTGGTAGTGGTCA+TGG 0.499188 6_4:+43776456 None:intergenic
GGGGTTTCAATAAAAGAGGC+GGG 0.502543 6_4:+43777006 None:intergenic
AACAAGAAATGCAATCAAAT+GGG 0.503558 6_4:-43776588 Msa0988910:CDS
GAGGTGGTGGTGATAGTGGT+TGG 0.506358 6_4:+43776967 None:intergenic
GATAGTGGTGGTAATTGGGA+TGG 0.508229 6_4:+43776774 None:intergenic
GTGGTGGAGCTAGGGCTAAT+AGG 0.510314 6_4:+43776391 None:intergenic
TTGAAATTATTGGTAGGCGT+GGG 0.511388 6_4:+43776523 None:intergenic
AAAAGAGGCGGGGTTAGTAA+AGG 0.516494 6_4:+43777017 None:intergenic
TCTTGTTGTTCGATAAGTGT+TGG 0.517204 6_4:+43776604 None:intergenic
TCACCAAACATTTCAAAGCT+GGG 0.518423 6_4:-43775039 Msa0988910:CDS
GGGAATAGTGGTGGTTGAAG+GGG 0.519900 6_4:+43776702 None:intergenic
GTCAGTCTAGTTGGGGTGCA+AGG 0.520565 6_4:+43776481 None:intergenic
AAAATCCTAGATCTGGTGTT+GGG 0.521031 6_4:+43776178 None:intergenic
GTTAGCGAAGGTGTTGGTAG+TGG 0.522503 6_4:+43776450 None:intergenic
AAGACTAGATTACCCGCTGT+TGG 0.528458 6_4:-43775075 Msa0988910:CDS
TAAGGGATTTCTGATTGACT+AGG 0.529361 6_4:+43774955 None:intergenic
AGTGATGATGTTAGTCAAGT+TGG 0.536549 6_4:+43776369 None:intergenic
GAGTATTGCATAATCTGAAA+TGG 0.538274 6_4:+43776318 None:intergenic
TCAAGTTGGTGGTGGAGCTA+GGG 0.539100 6_4:+43776383 None:intergenic
ATTCCACCATTGTACTTCGA+TGG 0.541129 6_4:-43776913 Msa0988910:CDS
AGGAAGGATTTGTGATTCAC+CGG 0.548075 6_4:+43774792 None:intergenic
TGGTGTTTGAGATGGAGATG+GGG 0.548223 6_4:+43776987 None:intergenic
AAGGGATTTCTGATTGACTA+GGG 0.549712 6_4:+43774956 None:intergenic
GGTTTGGATAATAGTGATTG+GGG 0.549958 6_4:+43776723 None:intergenic
AGCCTTGTTGCTATTGACAA+AGG 0.551037 6_4:+43777044 None:intergenic
GACTTGAAATTTCCAACAGC+GGG 0.560025 6_4:+43775063 None:intergenic
TCTGACATATCAGTCATGCT+TGG 0.560481 6_4:+43774718 None:intergenic
ACAAGCTTTCAGAAGATTGG+TGG 0.561395 6_4:-43775962 Msa0988910:CDS
TGATTCACCGGAGTAATCAT+GGG 0.561593 6_4:+43774804 None:intergenic
TGATTGATTGAGCTTTCTTG+GGG 0.561989 6_4:+43776213 None:intergenic
CAGGGTTATTGTCTTGGGCA+AGG 0.568974 6_4:+43776884 None:intergenic
ATTGAAATTATTGGTAGGCG+TGG 0.569218 6_4:+43776522 None:intergenic
GGGGCATGGAGAGAGGTGGT+GGG 0.569845 6_4:+43776796 None:intergenic
ATAGTGGTTGGTGTTTGAGA+TGG 0.570849 6_4:+43776979 None:intergenic
CATGGGAGTCAGTCTAGTTG+GGG 0.570910 6_4:+43776474 None:intergenic
ATGTCGATCATCCAGAGAGC+AGG 0.571282 6_4:-43774993 Msa0988910:CDS
AGTTGTTGTGGGGTTAGCGA+AGG 0.571858 6_4:+43776438 None:intergenic
TTTCAGAAGATTGGTGGTCG+TGG 0.572428 6_4:-43775956 Msa0988910:CDS
AAGGTGTTGGTAGTGGTCAT+GGG 0.574401 6_4:+43776457 None:intergenic
TAAAATCCTAGATCTGGTGT+TGG 0.574409 6_4:+43776177 None:intergenic
CGAGGATTGAAATTATTGGT+AGG 0.574794 6_4:+43776517 None:intergenic
AAAGCTTGTTTGTTCTCACA+TGG 0.575398 6_4:+43775976 None:intergenic
AATAGTGATTGGGGATGAAG+TGG 0.575835 6_4:+43776732 None:intergenic
ATGTGAAAAGACCTTGGATG+TGG 0.577521 6_4:+43775900 None:intergenic
GATGATGTTAGTCAAGTTGG+TGG 0.578135 6_4:+43776372 None:intergenic
TGAAATGGTAGGATATTGAC+TGG 0.578765 6_4:+43776333 None:intergenic
AGGAGATATGACATTATTGG+TGG 0.586877 6_4:+43776942 None:intergenic
AGATGGGGTTTCAATAAAAG+AGG 0.589549 6_4:+43777002 None:intergenic
TATGACATTATTGGTGGTGG+AGG 0.590376 6_4:+43776948 None:intergenic
GGTAAATGGAACTCTATTGG+TGG 0.596193 6_4:-43775120 Msa0988910:CDS
ATTGCATAATCTGAAATGGT+AGG 0.596503 6_4:+43776322 None:intergenic
GATGTTAGTCAAGTTGGTGG+TGG 0.602752 6_4:+43776375 None:intergenic
TGATTGTACCAAATGTTATG+TGG 0.605424 6_4:+43776677 None:intergenic
TGTGGGGTTAGCGAAGGTGT+TGG 0.606403 6_4:+43776444 None:intergenic
CTAATAGGTCCAGTAGTGGT+CGG 0.607958 6_4:+43776406 None:intergenic
CTTTGATGACTTGTTCTGGG+AGG 0.611922 6_4:+43775095 None:intergenic
TTCCTTTGTCAATAGCAACA+AGG 0.614355 6_4:-43777046 Msa0988910:CDS
TTGGGGTGCAAGGAGTAGTG+AGG 0.617997 6_4:+43776491 None:intergenic
GTAAATGGAACTCTATTGGT+GGG 0.619020 6_4:-43775119 Msa0988910:CDS
GAAATAGAAAACCATCATTG+AGG 0.620026 6_4:+43774671 None:intergenic
TTAGCGGGTCCCCACATCCA+AGG 0.623038 6_4:-43775911 Msa0988910:intron
TGAAATTATTGGTAGGCGTG+GGG 0.623408 6_4:+43776524 None:intergenic
CAAGGAGTAGTGAGGGTACG+AGG 0.625029 6_4:+43776499 None:intergenic
AGCAATGCCCATGATTACTC+CGG 0.626209 6_4:-43774811 Msa0988910:CDS
TGTGAAAAGACCTTGGATGT+GGG 0.630725 6_4:+43775901 None:intergenic
TGTACCAAATGTTATGTGGT+CGG 0.633920 6_4:+43776681 None:intergenic
TGGGGTGCAAGGAGTAGTGA+GGG 0.635620 6_4:+43776492 None:intergenic
GTGAAAAGACCTTGGATGTG+GGG 0.637723 6_4:+43775902 None:intergenic
AAACCATCGAAGTACAATGG+TGG 0.638547 6_4:+43776910 None:intergenic
TGGGGTTTCAATAAAAGAGG+CGG 0.641388 6_4:+43777005 None:intergenic
ATAGAAAACCATCATTGAGG+TGG 0.645904 6_4:+43774674 None:intergenic
CTAAAACCATCGAAGTACAA+TGG 0.654690 6_4:+43776907 None:intergenic
AAGCATGACTGATATGTCAG+AGG 0.660878 6_4:-43774716 Msa0988910:CDS
CGACTTGAAATTTCCAACAG+CGG 0.670165 6_4:+43775062 None:intergenic
AGGGCTAATAGGTCCAGTAG+TGG 0.675550 6_4:+43776402 None:intergenic
TATGTGGTCGGGAATAGTGG+TGG 0.685559 6_4:+43776693 None:intergenic
GATTGATTGAGCTTTCTTGG+GGG 0.688353 6_4:+43776214 None:intergenic
GGGTTTCAATAAAAGAGGCG+GGG 0.696209 6_4:+43777007 None:intergenic
AATGAAGGTTGGGATAGTGG+TGG 0.722924 6_4:+43776762 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAAATTAATGTATTTT+TGG - chr6_4:43776134-43776153 Msa0988910:CDS 10.0%
!!! TATCAAAATTAATGTATTTT+TGG - chr6_4:43776134-43776153 Msa0988910:CDS 10.0%
!! AACAAGAAGAAAAAATAAAA+AGG + chr6_4:43776242-43776261 None:intergenic 15.0%
!! ACTAAAAATATATGTGTATT+TGG + chr6_4:43776399-43776418 None:intergenic 15.0%
!! AACAAGAAGAAAAAATAAAA+AGG + chr6_4:43776242-43776261 None:intergenic 15.0%
!! ACTAAAAATATATGTGTATT+TGG + chr6_4:43776399-43776418 None:intergenic 15.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_4:43774890-43774909 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_4:43774891-43774910 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_4:43775726-43775745 Msa0988910:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_4:43776150-43776169 Msa0988910:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_4:43776195-43776214 None:intergenic 20.0%
!!! TGAAATCATTTTGTTTAAGT+GGG + chr6_4:43774890-43774909 None:intergenic 20.0%
!!! ATGAAATCATTTTGTTTAAG+TGG + chr6_4:43774891-43774910 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_4:43775726-43775745 Msa0988910:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_4:43776150-43776169 Msa0988910:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_4:43776195-43776214 None:intergenic 20.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_4:43774889-43774908 None:intergenic 25.0%
! AACAAGAAATGCAATCAAAT+GGG - chr6_4:43775150-43775169 Msa0988910:CDS 25.0%
! GCAAAACATAATTCAAGAAT+CGG - chr6_4:43775605-43775624 Msa0988910:intron 25.0%
! CAAAACATAATTCAAGAATC+GGG - chr6_4:43775606-43775625 Msa0988910:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_4:43775735-43775754 Msa0988910:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_4:43775811-43775830 Msa0988910:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_4:43775924-43775943 Msa0988910:CDS 25.0%
! GATATATTTGTTCAGGAATA+AGG + chr6_4:43776328-43776347 None:intergenic 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_4:43776335-43776354 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_4:43776337-43776356 Msa0988910:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_4:43776338-43776357 Msa0988910:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_4:43776433-43776452 Msa0988910:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_4:43776472-43776491 Msa0988910:CDS 25.0%
! TAAGTTCAGTTTCTGAATAA+GGG + chr6_4:43776803-43776822 None:intergenic 25.0%
! ATAAGTTCAGTTTCTGAATA+AGG + chr6_4:43776804-43776823 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_4:43776867-43776886 None:intergenic 25.0%
!!! GAAATCATTTTGTTTAAGTG+GGG + chr6_4:43774889-43774908 None:intergenic 25.0%
! AACAAGAAATGCAATCAAAT+GGG - chr6_4:43775150-43775169 Msa0988910:CDS 25.0%
! GCAAAACATAATTCAAGAAT+CGG - chr6_4:43775605-43775624 Msa0988910:intron 25.0%
! CAAAACATAATTCAAGAATC+GGG - chr6_4:43775606-43775625 Msa0988910:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_4:43775735-43775754 Msa0988910:intron 25.0%
! TATGGACAAAAAAACATTAG+CGG - chr6_4:43775811-43775830 Msa0988910:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_4:43775924-43775943 Msa0988910:CDS 25.0%
! GATATATTTGTTCAGGAATA+AGG + chr6_4:43776328-43776347 None:intergenic 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_4:43776335-43776354 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_4:43776337-43776356 Msa0988910:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_4:43776338-43776357 Msa0988910:CDS 25.0%
! ATTAAAGTGATACGATTTAG+AGG - chr6_4:43776433-43776452 Msa0988910:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_4:43776472-43776491 Msa0988910:CDS 25.0%
! TAAGTTCAGTTTCTGAATAA+GGG + chr6_4:43776803-43776822 None:intergenic 25.0%
! ATAAGTTCAGTTTCTGAATA+AGG + chr6_4:43776804-43776823 None:intergenic 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_4:43776867-43776886 None:intergenic 25.0%
TTGAGGAGATATGACATTAT+TGG + chr6_4:43774802-43774821 None:intergenic 30.0%
!! TACAATGGTGGAATATTTTG+AGG + chr6_4:43774819-43774838 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_4:43774882-43774901 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_4:43775064-43775083 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_4:43775123-43775142 None:intergenic 30.0%
CAACAAGAAATGCAATCAAA+TGG - chr6_4:43775149-43775168 Msa0988910:CDS 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_4:43775419-43775438 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_4:43775423-43775442 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_4:43775467-43775486 None:intergenic 30.0%
ATTTGGTAAAATCCTAGATC+TGG + chr6_4:43775570-43775589 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+TGG + chr6_4:43775587-43775606 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_4:43775812-43775831 Msa0988910:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_4:43775847-43775866 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_4:43775923-43775942 Msa0988910:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_4:43775937-43775956 Msa0988910:CDS 30.0%
TTGAAACACAAACAAAACCT+AGG + chr6_4:43776008-43776027 None:intergenic 30.0%
!! TAAGTTTGTTTTCTGAAGGA+AGG + chr6_4:43776965-43776984 None:intergenic 30.0%
!! CCAATAAGTTTGTTTTCTGA+AGG + chr6_4:43776969-43776988 None:intergenic 30.0%
CCTTCAGAAAACAAACTTAT+TGG - chr6_4:43776966-43776985 Msa0988910:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_4:43777034-43777053 Msa0988910:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_4:43777070-43777089 None:intergenic 30.0%
TTGAGGAGATATGACATTAT+TGG + chr6_4:43774802-43774821 None:intergenic 30.0%
!! TACAATGGTGGAATATTTTG+AGG + chr6_4:43774819-43774838 None:intergenic 30.0%
!! TTTTGTTTAAGTGGGGAAAA+AGG + chr6_4:43774882-43774901 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_4:43775064-43775083 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_4:43775123-43775142 None:intergenic 30.0%
CAACAAGAAATGCAATCAAA+TGG - chr6_4:43775149-43775168 Msa0988910:CDS 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_4:43775419-43775438 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_4:43775423-43775442 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_4:43775467-43775486 None:intergenic 30.0%
ATTTGGTAAAATCCTAGATC+TGG + chr6_4:43775570-43775589 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+TGG + chr6_4:43775587-43775606 None:intergenic 30.0%
ATGGACAAAAAAACATTAGC+GGG - chr6_4:43775812-43775831 Msa0988910:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_4:43775847-43775866 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_4:43775923-43775942 Msa0988910:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_4:43775937-43775956 Msa0988910:CDS 30.0%
TTGAAACACAAACAAAACCT+AGG + chr6_4:43776008-43776027 None:intergenic 30.0%
!! TAAGTTTGTTTTCTGAAGGA+AGG + chr6_4:43776965-43776984 None:intergenic 30.0%
!! CCAATAAGTTTGTTTTCTGA+AGG + chr6_4:43776969-43776988 None:intergenic 30.0%
CCTTCAGAAAACAAACTTAT+TGG - chr6_4:43776966-43776985 Msa0988910:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_4:43777034-43777053 Msa0988910:CDS 30.0%
GAAATAGAAAACCATCATTG+AGG + chr6_4:43777070-43777089 None:intergenic 30.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_4:43774692-43774711 Msa0988910:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_4:43774739-43774758 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_4:43774796-43774815 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_4:43774799-43774818 None:intergenic 35.0%
CTAAAACCATCGAAGTACAA+TGG + chr6_4:43774834-43774853 None:intergenic 35.0%
TGGTTGTTGTAATGAAGGTT+GGG + chr6_4:43774989-43775008 None:intergenic 35.0%
TGAAGTGGTTGTTGTAATGA+AGG + chr6_4:43774994-43775013 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_4:43775018-43775037 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_4:43775019-43775038 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_4:43775060-43775079 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_4:43775119-43775138 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_4:43775120-43775139 None:intergenic 35.0%
!! TCTTGTTGTTCGATAAGTGT+TGG + chr6_4:43775137-43775156 None:intergenic 35.0%
TTGAAATTATTGGTAGGCGT+GGG + chr6_4:43775218-43775237 None:intergenic 35.0%
ATTGAAATTATTGGTAGGCG+TGG + chr6_4:43775219-43775238 None:intergenic 35.0%
CGAGGATTGAAATTATTGGT+AGG + chr6_4:43775224-43775243 None:intergenic 35.0%
GGTACGAGGATTGAAATTAT+TGG + chr6_4:43775228-43775247 None:intergenic 35.0%
GAGTGAAAAAAGTTGTTGTG+GGG + chr6_4:43775313-43775332 None:intergenic 35.0%
GGAGTGAAAAAAGTTGTTGT+GGG + chr6_4:43775314-43775333 None:intergenic 35.0%
! AGTGATGATGTTAGTCAAGT+TGG + chr6_4:43775372-43775391 None:intergenic 35.0%
AACATCATCACTAGTGTTCA+TGG - chr6_4:43775380-43775399 Msa0988910:intron 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_4:43775408-43775427 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_4:43775528-43775547 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_4:43775529-43775548 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_4:43775530-43775549 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_4:43775563-43775582 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_4:43775564-43775583 None:intergenic 35.0%
! AAAGCTTGTTTGTTCTCACA+TGG + chr6_4:43775765-43775784 None:intergenic 35.0%
CAAACAAGCTTTCAGAAGAT+TGG - chr6_4:43775773-43775792 Msa0988910:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_4:43775943-43775962 None:intergenic 35.0%
TAAGACCACAATTAGTGCAA+TGG + chr6_4:43775984-43776003 None:intergenic 35.0%
! ACTAATTGTGGTCTTAACCT+AGG - chr6_4:43775988-43776007 Msa0988910:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_4:43776341-43776360 Msa0988910:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_4:43776342-43776361 Msa0988910:CDS 35.0%
ACAAAAAAGTGACACCAAAG+AGG - chr6_4:43776545-43776564 Msa0988910:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_4:43776570-43776589 Msa0988910:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_4:43776605-43776624 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_4:43776604-43776623 Msa0988910:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_4:43776619-43776638 Msa0988910:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_4:43776649-43776668 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_4:43776650-43776669 None:intergenic 35.0%
TCACCAAACATTTCAAAGCT+GGG - chr6_4:43776699-43776718 Msa0988910:CDS 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_4:43776785-43776804 None:intergenic 35.0%
TAAGGGATTTCTGATTGACT+AGG + chr6_4:43776786-43776805 None:intergenic 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_4:43777067-43777086 None:intergenic 35.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_4:43774692-43774711 Msa0988910:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_4:43774739-43774758 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_4:43774796-43774815 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_4:43774799-43774818 None:intergenic 35.0%
CTAAAACCATCGAAGTACAA+TGG + chr6_4:43774834-43774853 None:intergenic 35.0%
TGGTTGTTGTAATGAAGGTT+GGG + chr6_4:43774989-43775008 None:intergenic 35.0%
TGAAGTGGTTGTTGTAATGA+AGG + chr6_4:43774994-43775013 None:intergenic 35.0%
GGTTTGGATAATAGTGATTG+GGG + chr6_4:43775018-43775037 None:intergenic 35.0%
GGGTTTGGATAATAGTGATT+GGG + chr6_4:43775019-43775038 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_4:43775060-43775079 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_4:43775119-43775138 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_4:43775120-43775139 None:intergenic 35.0%
!! TCTTGTTGTTCGATAAGTGT+TGG + chr6_4:43775137-43775156 None:intergenic 35.0%
TTGAAATTATTGGTAGGCGT+GGG + chr6_4:43775218-43775237 None:intergenic 35.0%
ATTGAAATTATTGGTAGGCG+TGG + chr6_4:43775219-43775238 None:intergenic 35.0%
CGAGGATTGAAATTATTGGT+AGG + chr6_4:43775224-43775243 None:intergenic 35.0%
GGTACGAGGATTGAAATTAT+TGG + chr6_4:43775228-43775247 None:intergenic 35.0%
GAGTGAAAAAAGTTGTTGTG+GGG + chr6_4:43775313-43775332 None:intergenic 35.0%
GGAGTGAAAAAAGTTGTTGT+GGG + chr6_4:43775314-43775333 None:intergenic 35.0%
! AGTGATGATGTTAGTCAAGT+TGG + chr6_4:43775372-43775391 None:intergenic 35.0%
AACATCATCACTAGTGTTCA+TGG - chr6_4:43775380-43775399 Msa0988910:intron 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_4:43775408-43775427 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_4:43775528-43775547 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_4:43775529-43775548 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_4:43775530-43775549 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_4:43775563-43775582 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_4:43775564-43775583 None:intergenic 35.0%
! AAAGCTTGTTTGTTCTCACA+TGG + chr6_4:43775765-43775784 None:intergenic 35.0%
CAAACAAGCTTTCAGAAGAT+TGG - chr6_4:43775773-43775792 Msa0988910:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_4:43775943-43775962 None:intergenic 35.0%
TAAGACCACAATTAGTGCAA+TGG + chr6_4:43775984-43776003 None:intergenic 35.0%
! ACTAATTGTGGTCTTAACCT+AGG - chr6_4:43775988-43776007 Msa0988910:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_4:43776341-43776360 Msa0988910:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_4:43776342-43776361 Msa0988910:CDS 35.0%
ACAAAAAAGTGACACCAAAG+AGG - chr6_4:43776545-43776564 Msa0988910:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_4:43776570-43776589 Msa0988910:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_4:43776605-43776624 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_4:43776604-43776623 Msa0988910:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_4:43776619-43776638 Msa0988910:CDS 35.0%
!! AGTCTTTGATGACTTGTTCT+GGG + chr6_4:43776649-43776668 None:intergenic 35.0%
!! TAGTCTTTGATGACTTGTTC+TGG + chr6_4:43776650-43776669 None:intergenic 35.0%
TCACCAAACATTTCAAAGCT+GGG - chr6_4:43776699-43776718 Msa0988910:CDS 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_4:43776785-43776804 None:intergenic 35.0%
TAAGGGATTTCTGATTGACT+AGG + chr6_4:43776786-43776805 None:intergenic 35.0%
ATAGAAAACCATCATTGAGG+TGG + chr6_4:43777067-43777086 None:intergenic 35.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_4:43774697-43774716 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_4:43774736-43774755 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_4:43774755-43774774 None:intergenic 40.0%
! ATAGTGGTTGGTGTTTGAGA+TGG + chr6_4:43774762-43774781 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_4:43774793-43774812 None:intergenic 40.0%
ATTCCACCATTGTACTTCGA+TGG - chr6_4:43774825-43774844 Msa0988910:CDS 40.0%
AAACCATCGAAGTACAATGG+TGG + chr6_4:43774831-43774850 None:intergenic 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_4:43774862-43774881 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_4:43774863-43774882 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_4:43774875-43774894 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_4:43774876-43774895 None:intergenic 40.0%
ATAGTGGTGGTAATTGGGAT+GGG + chr6_4:43774966-43774985 None:intergenic 40.0%
! TTGGGATAGTGGTGGTAATT+GGG + chr6_4:43774971-43774990 None:intergenic 40.0%
TGTAATGAAGGTTGGGATAG+TGG + chr6_4:43774982-43775001 None:intergenic 40.0%
GTGGTTGTTGTAATGAAGGT+TGG + chr6_4:43774990-43775009 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_4:43775009-43775028 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_4:43775020-43775039 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_4:43775053-43775072 Msa0988910:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_4:43775059-43775078 None:intergenic 40.0%
TGAAATTATTGGTAGGCGTG+GGG + chr6_4:43775217-43775236 None:intergenic 40.0%
CGGAGTGAAAAAAGTTGTTG+TGG + chr6_4:43775315-43775334 None:intergenic 40.0%
!! GATGATGTTAGTCAAGTTGG+TGG + chr6_4:43775369-43775388 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_4:43775527-43775546 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_4:43775555-43775574 Msa0988910:intron 40.0%
ACAAGCTTTCAGAAGATTGG+TGG - chr6_4:43775776-43775795 Msa0988910:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_4:43775840-43775859 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_4:43775841-43775860 None:intergenic 40.0%
AATTAGTGCAATGGCAAGGA+TGG + chr6_4:43775975-43775994 None:intergenic 40.0%
!! CACAACAAAAGTGTCCTCTT+TGG + chr6_4:43776562-43776581 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_4:43776615-43776634 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_4:43776615-43776634 Msa0988910:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_4:43776618-43776637 Msa0988910:CDS 40.0%
GACTTGAAATTTCCAACAGC+GGG + chr6_4:43776678-43776697 None:intergenic 40.0%
CGACTTGAAATTTCCAACAG+CGG + chr6_4:43776679-43776698 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+TGG - chr6_4:43776698-43776717 Msa0988910:CDS 40.0%
!! GAACCCAGCTTTGAAATGTT+TGG + chr6_4:43776705-43776724 None:intergenic 40.0%
ACTTGAATATTCCTGCTCTC+TGG + chr6_4:43776759-43776778 None:intergenic 40.0%
TTCTCTAGCAGCAGGTAAAT+GGG + chr6_4:43776832-43776851 None:intergenic 40.0%
TTTCTCTAGCAGCAGGTAAA+TGG + chr6_4:43776833-43776852 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+AGG + chr6_4:43776840-43776859 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_4:43776937-43776956 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_4:43776949-43776968 None:intergenic 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_4:43777023-43777042 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_4:43777022-43777041 Msa0988910:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_4:43777056-43777075 Msa0988910:CDS 40.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_4:43774697-43774716 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_4:43774736-43774755 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_4:43774755-43774774 None:intergenic 40.0%
! ATAGTGGTTGGTGTTTGAGA+TGG + chr6_4:43774762-43774781 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_4:43774793-43774812 None:intergenic 40.0%
ATTCCACCATTGTACTTCGA+TGG - chr6_4:43774825-43774844 Msa0988910:CDS 40.0%
AAACCATCGAAGTACAATGG+TGG + chr6_4:43774831-43774850 None:intergenic 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_4:43774862-43774881 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_4:43774863-43774882 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_4:43774875-43774894 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_4:43774876-43774895 None:intergenic 40.0%
ATAGTGGTGGTAATTGGGAT+GGG + chr6_4:43774966-43774985 None:intergenic 40.0%
! TTGGGATAGTGGTGGTAATT+GGG + chr6_4:43774971-43774990 None:intergenic 40.0%
TGTAATGAAGGTTGGGATAG+TGG + chr6_4:43774982-43775001 None:intergenic 40.0%
GTGGTTGTTGTAATGAAGGT+TGG + chr6_4:43774990-43775009 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_4:43775009-43775028 None:intergenic 40.0%
GGGGTTTGGATAATAGTGAT+TGG + chr6_4:43775020-43775039 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_4:43775053-43775072 Msa0988910:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_4:43775059-43775078 None:intergenic 40.0%
TGAAATTATTGGTAGGCGTG+GGG + chr6_4:43775217-43775236 None:intergenic 40.0%
CGGAGTGAAAAAAGTTGTTG+TGG + chr6_4:43775315-43775334 None:intergenic 40.0%
!! GATGATGTTAGTCAAGTTGG+TGG + chr6_4:43775369-43775388 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_4:43775527-43775546 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_4:43775555-43775574 Msa0988910:intron 40.0%
ACAAGCTTTCAGAAGATTGG+TGG - chr6_4:43775776-43775795 Msa0988910:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_4:43775840-43775859 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_4:43775841-43775860 None:intergenic 40.0%
AATTAGTGCAATGGCAAGGA+TGG + chr6_4:43775975-43775994 None:intergenic 40.0%
!! CACAACAAAAGTGTCCTCTT+TGG + chr6_4:43776562-43776581 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_4:43776615-43776634 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_4:43776615-43776634 Msa0988910:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_4:43776618-43776637 Msa0988910:CDS 40.0%
GACTTGAAATTTCCAACAGC+GGG + chr6_4:43776678-43776697 None:intergenic 40.0%
CGACTTGAAATTTCCAACAG+CGG + chr6_4:43776679-43776698 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+TGG - chr6_4:43776698-43776717 Msa0988910:CDS 40.0%
!! GAACCCAGCTTTGAAATGTT+TGG + chr6_4:43776705-43776724 None:intergenic 40.0%
ACTTGAATATTCCTGCTCTC+TGG + chr6_4:43776759-43776778 None:intergenic 40.0%
TTCTCTAGCAGCAGGTAAAT+GGG + chr6_4:43776832-43776851 None:intergenic 40.0%
TTTCTCTAGCAGCAGGTAAA+TGG + chr6_4:43776833-43776852 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+AGG + chr6_4:43776840-43776859 None:intergenic 40.0%
TGATTCACCGGAGTAATCAT+GGG + chr6_4:43776937-43776956 None:intergenic 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_4:43776949-43776968 None:intergenic 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_4:43777023-43777042 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_4:43777022-43777041 Msa0988910:CDS 40.0%
!! GATTTTGACCACCTCAATGA+TGG - chr6_4:43777056-43777075 Msa0988910:CDS 40.0%
! AAAAGAGGCGGGGTTAGTAA+AGG + chr6_4:43774724-43774743 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_4:43774734-43774753 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_4:43774735-43774754 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_4:43774754-43774773 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_4:43774756-43774775 None:intergenic 45.0%
TAGTGGTGGTAATTGGGATG+GGG + chr6_4:43774965-43774984 None:intergenic 45.0%
! GATAGTGGTGGTAATTGGGA+TGG + chr6_4:43774967-43774986 None:intergenic 45.0%
! GTTGGGATAGTGGTGGTAAT+TGG + chr6_4:43774972-43774991 None:intergenic 45.0%
! AATGAAGGTTGGGATAGTGG+TGG + chr6_4:43774979-43774998 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_4:43775051-43775070 None:intergenic 45.0%
TCATGGGAGTCAGTCTAGTT+GGG + chr6_4:43775268-43775287 None:intergenic 45.0%
!! AAGGTGTTGGTAGTGGTCAT+GGG + chr6_4:43775284-43775303 None:intergenic 45.0%
! TTTTTCACTCCGACCACTAC+TGG - chr6_4:43775323-43775342 Msa0988910:intron 45.0%
CTAATAGGTCCAGTAGTGGT+CGG + chr6_4:43775335-43775354 None:intergenic 45.0%
!! GATGTTAGTCAAGTTGGTGG+TGG + chr6_4:43775366-43775385 None:intergenic 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_4:43775782-43775801 Msa0988910:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_4:43775793-43775812 Msa0988910:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_4:43775839-43775858 None:intergenic 45.0%
CCACAATTAGTGCAATGGCA+AGG + chr6_4:43775979-43775998 None:intergenic 45.0%
CCTTGCCATTGCACTAATTG+TGG - chr6_4:43775976-43775995 Msa0988910:CDS 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_4:43776597-43776616 Msa0988910:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_4:43776646-43776665 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_4:43776663-43776682 Msa0988910:CDS 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_4:43776921-43776940 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_4:43776927-43776946 Msa0988910:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_4:43776938-43776957 None:intergenic 45.0%
! AAAAGAGGCGGGGTTAGTAA+AGG + chr6_4:43774724-43774743 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_4:43774734-43774753 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_4:43774735-43774754 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_4:43774754-43774773 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_4:43774756-43774775 None:intergenic 45.0%
TAGTGGTGGTAATTGGGATG+GGG + chr6_4:43774965-43774984 None:intergenic 45.0%
! GATAGTGGTGGTAATTGGGA+TGG + chr6_4:43774967-43774986 None:intergenic 45.0%
! GTTGGGATAGTGGTGGTAAT+TGG + chr6_4:43774972-43774991 None:intergenic 45.0%
! AATGAAGGTTGGGATAGTGG+TGG + chr6_4:43774979-43774998 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_4:43775051-43775070 None:intergenic 45.0%
TCATGGGAGTCAGTCTAGTT+GGG + chr6_4:43775268-43775287 None:intergenic 45.0%
!! AAGGTGTTGGTAGTGGTCAT+GGG + chr6_4:43775284-43775303 None:intergenic 45.0%
! TTTTTCACTCCGACCACTAC+TGG - chr6_4:43775323-43775342 Msa0988910:intron 45.0%
CTAATAGGTCCAGTAGTGGT+CGG + chr6_4:43775335-43775354 None:intergenic 45.0%
!! GATGTTAGTCAAGTTGGTGG+TGG + chr6_4:43775366-43775385 None:intergenic 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_4:43775782-43775801 Msa0988910:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_4:43775793-43775812 Msa0988910:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_4:43775839-43775858 None:intergenic 45.0%
CCACAATTAGTGCAATGGCA+AGG + chr6_4:43775979-43775998 None:intergenic 45.0%
CCTTGCCATTGCACTAATTG+TGG - chr6_4:43775976-43775995 Msa0988910:CDS 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_4:43776597-43776616 Msa0988910:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_4:43776646-43776665 None:intergenic 45.0%
AAGACTAGATTACCCGCTGT+TGG - chr6_4:43776663-43776682 Msa0988910:CDS 45.0%
! TCATGGGCATTGCTACTCAT+TGG + chr6_4:43776921-43776940 None:intergenic 45.0%
AGCAATGCCCATGATTACTC+CGG - chr6_4:43776927-43776946 Msa0988910:CDS 45.0%
GTGATTCACCGGAGTAATCA+TGG + chr6_4:43776938-43776957 None:intergenic 45.0%
!!! TTAAGATAAATAAATTTTAT+GGG + chr6_4:43776278-43776297 None:intergenic 5.0%
!!! TTTAAGATAAATAAATTTTA+TGG + chr6_4:43776279-43776298 None:intergenic 5.0%
!!! TTAAGATAAATAAATTTTAT+GGG + chr6_4:43776278-43776297 None:intergenic 5.0%
!!! TTTAAGATAAATAAATTTTA+TGG + chr6_4:43776279-43776298 None:intergenic 5.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_4:43774787-43774806 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_4:43774790-43774809 None:intergenic 50.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_4:43774857-43774876 None:intergenic 50.0%
AGTGGTGGTAATTGGGATGG+GGG + chr6_4:43774964-43774983 None:intergenic 50.0%
TAGTGGTGGTTGAAGGGGTT+TGG + chr6_4:43775034-43775053 None:intergenic 50.0%
GGGAATAGTGGTGGTTGAAG+GGG + chr6_4:43775039-43775058 None:intergenic 50.0%
CGGGAATAGTGGTGGTTGAA+GGG + chr6_4:43775040-43775059 None:intergenic 50.0%
TCGGGAATAGTGGTGGTTGA+AGG + chr6_4:43775041-43775060 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_4:43775048-43775067 None:intergenic 50.0%
CATGGGAGTCAGTCTAGTTG+GGG + chr6_4:43775267-43775286 None:intergenic 50.0%
GTCATGGGAGTCAGTCTAGT+TGG + chr6_4:43775269-43775288 None:intergenic 50.0%
!! GAAGGTGTTGGTAGTGGTCA+TGG + chr6_4:43775285-43775304 None:intergenic 50.0%
!! GTTAGCGAAGGTGTTGGTAG+TGG + chr6_4:43775291-43775310 None:intergenic 50.0%
! AGTTGTTGTGGGGTTAGCGA+AGG + chr6_4:43775303-43775322 None:intergenic 50.0%
AGGGCTAATAGGTCCAGTAG+TGG + chr6_4:43775339-43775358 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGAGCTA+GGG + chr6_4:43775358-43775377 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_4:43775518-43775537 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_4:43776348-43776367 Msa0988910:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_4:43776349-43776368 Msa0988910:CDS 50.0%
ATGTCGATCATCCAGAGAGC+AGG - chr6_4:43776745-43776764 Msa0988910:CDS 50.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_4:43774787-43774806 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_4:43774790-43774809 None:intergenic 50.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_4:43774857-43774876 None:intergenic 50.0%
AGTGGTGGTAATTGGGATGG+GGG + chr6_4:43774964-43774983 None:intergenic 50.0%
TAGTGGTGGTTGAAGGGGTT+TGG + chr6_4:43775034-43775053 None:intergenic 50.0%
GGGAATAGTGGTGGTTGAAG+GGG + chr6_4:43775039-43775058 None:intergenic 50.0%
CGGGAATAGTGGTGGTTGAA+GGG + chr6_4:43775040-43775059 None:intergenic 50.0%
TCGGGAATAGTGGTGGTTGA+AGG + chr6_4:43775041-43775060 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_4:43775048-43775067 None:intergenic 50.0%
CATGGGAGTCAGTCTAGTTG+GGG + chr6_4:43775267-43775286 None:intergenic 50.0%
GTCATGGGAGTCAGTCTAGT+TGG + chr6_4:43775269-43775288 None:intergenic 50.0%
!! GAAGGTGTTGGTAGTGGTCA+TGG + chr6_4:43775285-43775304 None:intergenic 50.0%
!! GTTAGCGAAGGTGTTGGTAG+TGG + chr6_4:43775291-43775310 None:intergenic 50.0%
! AGTTGTTGTGGGGTTAGCGA+AGG + chr6_4:43775303-43775322 None:intergenic 50.0%
AGGGCTAATAGGTCCAGTAG+TGG + chr6_4:43775339-43775358 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGAGCTA+GGG + chr6_4:43775358-43775377 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_4:43775518-43775537 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_4:43776348-43776367 Msa0988910:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_4:43776349-43776368 Msa0988910:CDS 50.0%
ATGTCGATCATCCAGAGAGC+AGG - chr6_4:43776745-43776764 Msa0988910:CDS 50.0%
!! GAGGTGGTGGTGATAGTGGT+TGG + chr6_4:43774774-43774793 None:intergenic 55.0%
!! ATGGAGAGAGGTGGTGGGAT+TGG + chr6_4:43774940-43774959 None:intergenic 55.0%
TGGTAATTGGGATGGGGGCA+TGG + chr6_4:43774959-43774978 None:intergenic 55.0%
TTGGTAGGCGTGGGGTTAAC+AGG + chr6_4:43775209-43775228 None:intergenic 55.0%
! CAAGGAGTAGTGAGGGTACG+AGG + chr6_4:43775242-43775261 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_4:43775249-43775268 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_4:43775250-43775269 None:intergenic 55.0%
GTCAGTCTAGTTGGGGTGCA+AGG + chr6_4:43775260-43775279 None:intergenic 55.0%
! TGTGGGGTTAGCGAAGGTGT+TGG + chr6_4:43775297-43775316 None:intergenic 55.0%
! GTGGTGGAGCTAGGGCTAAT+AGG + chr6_4:43775350-43775369 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGAGCT+AGG + chr6_4:43775359-43775378 None:intergenic 55.0%
!! GAGGTGGTGGTGATAGTGGT+TGG + chr6_4:43774774-43774793 None:intergenic 55.0%
!! ATGGAGAGAGGTGGTGGGAT+TGG + chr6_4:43774940-43774959 None:intergenic 55.0%
TGGTAATTGGGATGGGGGCA+TGG + chr6_4:43774959-43774978 None:intergenic 55.0%
TTGGTAGGCGTGGGGTTAAC+AGG + chr6_4:43775209-43775228 None:intergenic 55.0%
! CAAGGAGTAGTGAGGGTACG+AGG + chr6_4:43775242-43775261 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_4:43775249-43775268 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_4:43775250-43775269 None:intergenic 55.0%
GTCAGTCTAGTTGGGGTGCA+AGG + chr6_4:43775260-43775279 None:intergenic 55.0%
! TGTGGGGTTAGCGAAGGTGT+TGG + chr6_4:43775297-43775316 None:intergenic 55.0%
! GTGGTGGAGCTAGGGCTAAT+AGG + chr6_4:43775350-43775369 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGAGCT+AGG + chr6_4:43775359-43775378 None:intergenic 55.0%
! GGTGGAGGTGGTGGTGATAG+TGG + chr6_4:43774778-43774797 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_4:43775827-43775846 Msa0988910:intron 60.0%
! GGTGGAGGTGGTGGTGATAG+TGG + chr6_4:43774778-43774797 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_4:43775827-43775846 Msa0988910:intron 60.0%
GGGGCATGGAGAGAGGTGGT+GGG + chr6_4:43774945-43774964 None:intergenic 65.0%
! GATGGGGGCATGGAGAGAGG+TGG + chr6_4:43774949-43774968 None:intergenic 65.0%
! TGGGATGGGGGCATGGAGAG+AGG + chr6_4:43774952-43774971 None:intergenic 65.0%
GGGGCATGGAGAGAGGTGGT+GGG + chr6_4:43774945-43774964 None:intergenic 65.0%
! GATGGGGGCATGGAGAGAGG+TGG + chr6_4:43774949-43774968 None:intergenic 65.0%
! TGGGATGGGGGCATGGAGAG+AGG + chr6_4:43774952-43774971 None:intergenic 65.0%
! GGGGGCATGGAGAGAGGTGG+TGG + chr6_4:43774946-43774965 None:intergenic 70.0%
! GGGGGCATGGAGAGAGGTGG+TGG + chr6_4:43774946-43774965 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 43774666 43777094 43774666 ID=Msa0988910;Name=Msa0988910
chr6_4 mRNA 43774666 43777094 43774666 ID=Msa0988910-mRNA-1;Parent=Msa0988910;Name=Msa0988910-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|559
chr6_4 exon 43776133 43777094 43776133 ID=Msa0988910-mRNA-1:exon:10095;Parent=Msa0988910-mRNA-1
chr6_4 exon 43775912 43776028 43775912 ID=Msa0988910-mRNA-1:exon:10094;Parent=Msa0988910-mRNA-1
chr6_4 exon 43774666 43775266 43774666 ID=Msa0988910-mRNA-1:exon:10093;Parent=Msa0988910-mRNA-1
chr6_4 CDS 43776133 43777094 43776133 ID=Msa0988910-mRNA-1:cds;Parent=Msa0988910-mRNA-1
chr6_4 CDS 43775912 43776028 43775912 ID=Msa0988910-mRNA-1:cds;Parent=Msa0988910-mRNA-1
chr6_4 CDS 43774666 43775266 43774666 ID=Msa0988910-mRNA-1:cds;Parent=Msa0988910-mRNA-1
Gene Sequence

>Msa0988910

ATGGACATTGACAAATGGGATCTCTTTTCCTTTGTCAATAGCAACAAGGCTAAAACCTTTACTAACCCCGCCTCTTTTATTGAAACCCCATCTCCATCTCAAACACCAACCACTATCACCACCACCTCCACCACCAATAATGTCATATCTCCTCAAAATATTCCACCATTGTACTTCGATGGTTTTAGCCTTGCCCAAGACAATAACCCTGTTCCTTTTTCCCCACTTAAACAAAATGATTTCATAGATCTAGACAAATTGAAAATCAATTCCAATCCCACCACCTCTCTCCATGCCCCCATCCCAATTACCACCACTATCCCAACCTTCATTACAACAACCACTTCATCCCCAATCACTATTATCCAAACCCCTTCAACCACCACTATTCCCGACCACATAACATTTGGTACAATCACTAACACTAGTGCTCATGCTTTAAATAAAAAACCCACCTTTTTTGATTGTCCAACACTTATCGAACAACAAGAAATGCAATCAAATGGGCACGAGCTAAATAAATTTATATTCAACAAAAATCCTGTTAACCCCACGCCTACCAATAATTTCAATCCTCGTACCCTCACTACTCCTTGCACCCCAACTAGACTGACTCCCATGACCACTACCAACACCTTCGCTAACCCCACAACAACTTTTTTCACTCCGACCACTACTGGACCTATTAGCCCTAGCTCCACCACCAACTTGACTAACATCATCACTAGTGTTCATGGAACCAGTCAATATCCTACCATTTCAGATTATGCAATACTCATCAAACAACAACAAATTCAACCAAACAATAACAGTCAAGTGTTTGATCATGCATACAACTATTCATTTGTTCCACAACAACCCCCAAGAAAGCTCAATCAATCACAAATTCAATTACCCAACACCAGATCTAGGATTTTACCAAATTCAGATTCACAAAAAGCAAAACATAATTCAAGAATCGGAAAAATTAACAACAAGGTAACTTTGGAATGCCATGTGAGAACAAACAAGCTTTCAGAAGATTGGTGGTCGTGGACAAAATATGGACAAAAAAACATTAGCGGGTCCCCACATCCAAGGAGCTACTTTAAATGTAGCAGTTCTAAAGATTGTTCAGCAAAAAAACTAGTACAAAAAAGTGACACCAAAGAGGACACTTTTGTTGTGACGTTTGTTGGAGCACACAACCATGAAAAACCAGCAGGTAAATGGAACTCTATTGGTGGGACCTCCCAGAACAAGTCATCAAAGACTAGATTACCCGCTGTTGGAAATTTCAAGTCGTCACCAAACATTTCAAAGCTGGGTTCTCAAAATGTGACAATGATGCATGTCGATCATCCAGAGAGCAGGAATATTCAAGTTCTCCCTAGTCAATCAGAAATCCCTTATTCAGAAACTGAACTTATAGAGACCCATTTACCTGCTGCTAGAGAAATTGAATCATCTCCTAATGTTGAAAACTTGTTTTCATATGATGTGACGATGCTACAATCTGATGAGCCAATGAGTAGCAATGCCCATGATTACTCCGGTGAATCACAAATCCTTCCTTCAGAAAACAAACTTATTGGAAACTTTGATGACGATGAAGAAATTATGATACCAAGCATGACTGATATGTCAGAGGATTTCTTATTGGATTTTGACCACCTCAATGATGGTTTTCTATTTCCTTAG
Protein sequence

>Msa0988910

MDIDKWDLFSFVNSNKAKTFTNPASFIETPSPSQTPTTITTTSTTNNVISPQNIPPLYFDGFSLAQDNNPVPFSPLKQNDFIDLDKLKINSNPTTSLHAPIPITTTIPTFITTTTSSPITIIQTPSTTTIPDHITFGTITNTSAHALNKKPTFFDCPTLIEQQEMQSNGHELNKFIFNKNPVNPTPTNNFNPRTLTTPCTPTRLTPMTTTNTFANPTTTFFTPTTTGPISPSSTTNLTNIITSVHGTSQYPTISDYAILIKQQQIQPNNNSQVFDHAYNYSFVPQQPPRKLNQSQIQLPNTRSRILPNSDSQKAKHNSRIGKINNKVTLECHVRTNKLSEDWWSWTKYGQKNISGSPHPRSYFKCSSSKDCSAKKLVQKSDTKEDTFVVTFVGAHNHEKPAGKWNSIGGTSQNKSSKTRLPAVGNFKSSPNISKLGSQNVTMMHVDHPESRNIQVLPSQSEIPYSETELIETHLPAAREIESSPNVENLFSYDVTMLQSDEPMSSNAHDYSGESQILPSENKLIGNFDDDEEIMIPSMTDMSEDFLLDFDHLNDGFLFP*