AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0988920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988920 MtrunA17_Chr6g0470151 80.387 362 60 2 1 361 1 352 6.23e-160 461
Msa0988920 MtrunA17_Chr2g0289181 46.781 233 123 1 326 557 1 233 3.15e-67 217
Msa0988920 MtrunA17_Chr6g0470161 80.488 123 20 1 435 557 2 120 7.84e-62 199
Msa0988920 MtrunA17_Chr7g0266611 47.879 165 84 2 394 557 2 165 1.06e-30 117
Msa0988920 MtrunA17_Chr8g0366921 49.733 187 74 5 1 179 1 175 2.81e-27 112
Msa0988920 MtrunA17_Chr1g0202461 40.800 125 63 2 290 414 222 335 2.95e-26 110
Msa0988920 MtrunA17_Chr8g0348311 44.660 103 54 2 316 418 134 233 8.49e-23 99.8
Msa0988920 MtrunA17_Chr7g0248691 42.342 111 55 2 311 413 118 227 6.63e-22 97.1
Msa0988920 MtrunA17_Chr7g0266621 38.095 336 158 7 1 320 1 302 1.91e-20 92.0
Msa0988920 MtrunA17_Chr7g0270051 44.706 85 47 0 332 416 46 130 9.08e-19 86.7
Msa0988920 MtrunA17_Chr2g0293481 48.052 77 39 1 340 416 268 343 2.16e-18 88.2
Msa0988920 MtrunA17_Chr8g0387501 50.000 72 35 1 340 411 130 200 4.83e-18 84.3
Msa0988920 MtrunA17_Chr5g0401821 44.706 85 44 1 315 396 172 256 1.67e-16 80.1
Msa0988920 MtrunA17_Chr7g0238921 40.566 106 51 3 291 396 87 180 1.86e-16 80.5
Msa0988920 MtrunA17_Chr4g0071521 44.706 85 44 1 315 396 218 302 4.37e-16 79.3
Msa0988920 MtrunA17_Chr2g0319961 50.794 63 31 0 340 402 81 143 1.42e-15 77.0
Msa0988920 MtrunA17_Chr8g0379461 47.619 63 33 0 340 402 77 139 2.14e-15 76.3
Msa0988920 MtrunA17_Chr4g0053281 51.613 62 30 0 340 401 267 328 2.36e-15 77.4
Msa0988920 MtrunA17_Chr2g0284321 50.000 60 30 0 340 399 36 95 2.94e-15 75.1
Msa0988920 MtrunA17_Chr1g0184691 45.122 82 42 1 320 398 271 352 3.36e-15 77.4
Msa0988920 MtrunA17_Chr7g0218081 42.683 82 45 2 337 418 408 487 4.42e-15 78.2
Msa0988920 MtrunA17_Chr7g0228941 42.647 68 39 0 333 400 46 113 1.33e-14 70.5
Msa0988920 MtrunA17_Chr8g0387981 38.043 92 51 2 309 394 98 189 1.43e-14 75.5
Msa0988920 MtrunA17_Chr1g0147881 34.737 95 57 1 319 408 237 331 1.92e-14 74.7
Msa0988920 MtrunA17_Chr4g0042831 39.785 93 51 2 337 425 276 367 2.32e-14 75.1
Msa0988920 MtrunA17_Chr2g0293901 47.305 167 74 4 1 167 1 153 3.66e-14 71.6
Msa0988920 MtrunA17_Chr5g0418191 43.478 69 38 1 337 405 318 385 9.49e-14 73.6
Msa0988920 MtrunA17_Chr3g0129321 40.580 69 38 3 336 403 115 181 1.20e-12 67.4
Msa0988920 MtrunA17_Chr7g0249311 46.377 69 35 2 331 399 171 237 1.26e-12 70.5
Msa0988920 MtrunA17_Chr7g0249311 42.424 66 37 1 339 404 392 456 5.21e-12 68.6
Msa0988920 MtrunA17_Chr2g0302391 43.333 60 34 0 340 399 212 271 1.71e-12 69.7
Msa0988920 MtrunA17_Chr4g0001361 42.353 85 48 1 334 417 157 241 1.82e-12 68.6
Msa0988920 MtrunA17_Chr7g0263531 44.615 65 35 1 335 399 357 420 2.18e-12 69.3
Msa0988920 MtrunA17_Chr3g0136961 40.476 84 49 1 314 396 112 195 3.27e-12 67.4
Msa0988920 MtrunA17_Chr4g0051881 45.902 61 32 1 339 399 178 237 3.46e-12 67.8
Msa0988920 MtrunA17_Chr5g0443131 46.774 62 32 1 339 400 157 217 4.03e-12 67.4
Msa0988920 MtrunA17_Chr2g0288871 33.981 103 64 3 298 399 266 365 6.19e-12 68.2
Msa0988920 MtrunA17_Chr7g0243891 47.059 68 34 2 332 399 209 274 7.46e-12 67.8
Msa0988920 MtrunA17_Chr3g0079691 50.000 62 29 2 338 399 279 338 7.86e-12 68.2
Msa0988920 MtrunA17_Chr3g0079691 39.062 64 38 1 339 402 495 557 1.05e-11 67.8
Msa0988920 MtrunA17_Chr4g0074001 39.394 66 39 1 337 402 357 421 8.37e-12 67.8
Msa0988920 MtrunA17_Chr5g0445311 38.806 67 40 1 339 405 364 429 9.53e-12 67.8
Msa0988920 MtrunA17_Chr3g0101131 38.806 67 40 1 339 405 415 480 9.75e-12 67.8
Msa0988920 MtrunA17_Chr7g0249301 42.188 64 36 1 339 402 292 354 1.13e-11 66.6
Msa0988920 MtrunA17_Chr1g0194481 40.000 70 41 1 339 408 158 226 1.87e-11 65.5
Msa0988920 MtrunA17_Chr8g0368721 47.594 187 83 4 1 186 1 173 2.00e-11 65.5
Msa0988920 MtrunA17_Chr2g0333851 43.284 67 38 0 334 400 164 230 2.02e-11 65.5
Msa0988920 MtrunA17_Chr4g0004911 39.062 64 38 1 339 402 336 398 7.24e-11 64.7
Msa0988920 MtrunA17_Chr1g0150281 40.278 72 43 0 340 411 141 212 8.68e-11 63.2
Msa0988920 MtrunA17_Chr8g0347251 40.449 89 47 2 312 394 105 193 9.68e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0988920 AT5G52830.1 50.000 98 47 2 317 414 144 239 1.27e-24 105
Msa0988920 AT4G01250.1 37.405 131 79 2 283 413 74 201 4.23e-22 97.4
Msa0988920 AT4G23550.1 45.455 88 47 1 331 418 132 218 4.71e-20 91.7
Msa0988920 AT1G30650.1 38.793 116 66 2 293 408 175 285 1.73e-17 85.5
Msa0988920 AT5G45050.4 39.091 110 65 2 299 408 1002 1109 2.40e-17 86.7
Msa0988920 AT5G45050.1 39.091 110 65 2 299 408 1141 1248 3.01e-17 86.3
Msa0988920 AT2G34830.1 50.725 69 33 1 340 408 216 283 3.02e-17 84.7
Msa0988920 AT2G34830.2 50.725 69 33 1 340 408 225 292 3.40e-17 84.7
Msa0988920 AT5G45050.2 39.091 110 65 2 299 408 1113 1220 3.62e-17 85.9
Msa0988920 AT2G23320.1 43.529 85 45 1 315 396 213 297 3.68e-17 83.2
Msa0988920 AT5G28650.1 41.304 92 51 1 310 398 230 321 5.27e-17 82.8
Msa0988920 AT3G04670.1 36.441 118 61 3 284 398 215 321 6.95e-17 82.4
Msa0988920 AT4G24240.1 43.529 85 45 1 315 396 254 338 5.16e-16 80.1
Msa0988920 AT4G31550.2 38.000 100 59 1 308 404 211 310 2.62e-15 77.8
Msa0988920 AT4G31550.1 38.710 93 54 1 315 404 219 311 4.24e-15 77.0
Msa0988920 AT2G24570.1 39.080 87 50 1 315 398 216 302 8.33e-15 76.3
Msa0988920 AT3G58710.2 46.970 66 35 0 340 405 71 136 1.48e-14 74.7
Msa0988920 AT3G58710.1 46.970 66 35 0 340 405 72 137 1.56e-14 74.7
Msa0988920 AT1G29280.1 48.333 60 31 0 340 399 75 134 3.98e-14 73.2
Msa0988920 AT2G03340.1 43.478 69 38 1 337 405 413 480 8.70e-14 74.3
Msa0988920 AT2G30590.1 41.935 93 42 3 310 398 288 372 3.03e-13 72.0
Msa0988920 AT3G01080.2 36.559 93 48 2 317 399 312 403 4.99e-13 72.0
Msa0988920 AT1G80840.1 37.000 100 60 2 334 431 141 239 6.30e-13 70.1
Msa0988920 AT3G01080.1 42.857 63 35 1 337 399 304 365 6.34e-13 71.2
Msa0988920 AT5G43290.1 41.096 73 42 1 324 396 99 170 1.12e-12 68.9
Msa0988920 AT5G45260.1 30.573 157 89 7 253 402 1130 1273 1.21e-12 71.6
Msa0988920 AT2G04880.2 44.444 63 34 1 340 402 284 345 2.12e-12 69.7
Msa0988920 AT2G04880.1 44.444 63 34 1 340 402 308 369 2.17e-12 70.1
Msa0988920 AT1G13960.1 42.857 63 35 1 337 399 407 468 4.58e-12 68.9
Msa0988920 AT1G13960.2 42.857 63 35 1 337 399 254 315 4.92e-12 68.2
Msa0988920 AT4G31800.2 42.500 80 43 1 334 410 106 185 9.36e-12 65.9
Msa0988920 AT4G18170.1 35.644 101 59 2 301 396 129 228 1.13e-11 66.6
Msa0988920 AT2G47260.1 38.636 88 52 2 312 399 148 233 1.18e-11 66.6
Msa0988920 AT2G37260.1 37.037 81 46 2 320 396 326 405 1.21e-11 67.4
Msa0988920 AT2G37260.2 37.037 81 46 2 320 396 244 323 1.34e-11 66.6
Msa0988920 AT2G37260.3 37.037 81 46 2 320 396 246 325 1.38e-11 66.6
Msa0988920 AT4G26640.7 41.026 78 43 3 337 413 169 244 1.80e-11 67.0
Msa0988920 AT2G25000.3 45.455 66 36 0 334 399 120 185 2.00e-11 65.1
Msa0988920 AT4G26640.2 41.026 78 43 3 337 413 209 284 2.02e-11 67.0
Msa0988920 AT4G26640.1 41.026 78 43 3 337 413 137 212 2.08e-11 67.0
Msa0988920 AT2G25000.2 45.455 66 36 0 334 399 98 163 2.09e-11 64.3
Msa0988920 AT2G25000.4 45.455 66 36 0 334 399 98 163 2.09e-11 64.3
Msa0988920 AT4G26640.5 41.026 78 43 3 337 413 33 108 2.19e-11 66.2
Msa0988920 AT4G26640.6 41.026 78 43 3 337 413 33 108 2.19e-11 66.2
Msa0988920 AT4G26640.4 41.026 78 43 3 337 413 33 108 2.19e-11 66.2
Msa0988920 AT4G26640.3 41.026 78 43 3 337 413 33 108 2.19e-11 66.2
Msa0988920 AT1G29860.1 43.548 62 34 1 339 400 136 196 2.35e-11 65.1
Msa0988920 AT4G31800.1 42.500 80 43 1 334 410 171 250 2.39e-11 65.5
Msa0988920 AT5G56270.1 39.062 64 38 1 339 402 487 549 2.80e-11 66.6
Msa0988920 AT2G46400.1 38.710 93 50 2 309 394 69 161 4.15e-11 64.7
Msa0988920 AT2G40750.1 39.080 87 43 3 312 394 129 209 4.61e-11 65.1
Msa0988920 AT2G25000.1 45.455 66 36 0 334 399 141 206 6.03e-11 63.9
Msa0988920 AT5G07100.1 43.939 66 36 1 334 399 112 176 6.18e-11 64.3
Msa0988920 AT4G11070.2 37.255 102 58 2 299 394 65 166 6.95e-11 63.9
Msa0988920 AT2G21900.1 45.161 62 33 1 339 400 109 169 6.95e-11 62.4
Msa0988920 AT5G07100.2 43.939 66 36 1 334 399 19 83 8.40e-11 62.4
Msa0988920 AT5G07100.4 43.939 66 36 1 334 399 19 83 8.40e-11 62.4
Msa0988920 AT5G07100.5 43.939 66 36 1 334 399 19 83 8.40e-11 62.4
Msa0988920 AT5G07100.3 43.939 66 36 1 334 399 19 83 8.40e-11 62.4
Msa0988920 AT4G23810.1 40.000 85 45 2 316 394 131 215 9.03e-11 63.9
Msa0988920 AT4G11070.1 37.255 102 58 2 299 394 97 198 9.27e-11 63.9
Msa0988920 AT2G38470.1 32.710 107 69 2 339 443 362 467 9.46e-11 64.7

Find 152 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCAGAAAACAAACTTAT+TGG 0.125564 6_4:-43781289 Msa0988920:CDS
TTTCTCTAGCAGCGGGTAAA+TGG 0.192922 6_4:+43781425 None:intergenic
TACCCGCTGTTGGAAATTTC+AGG 0.250971 6_4:-43781579 Msa0988920:CDS
TTGAGGAGATATGACATTAT+TGG 0.264254 6_4:+43783449 None:intergenic
TGTGATTGATTGAGCTTTCT+TGG 0.276762 6_4:+43782724 None:intergenic
GGTGGGAGTATTGAAATTAT+TGG 0.287618 6_4:+43783026 None:intergenic
ATTTGTTTAAGTGGGGAAAA+AGG 0.288656 6_4:+43783369 None:intergenic
ACTTGAATATTCCTGCTCTT+TGG 0.289651 6_4:+43781496 None:intergenic
TGGTGGTCGTGGACAAAATA+TGG 0.290490 6_4:-43782460 Msa0988920:CDS
TAGGCTTTGATGACTTGTTC+TGG 0.297861 6_4:+43781605 None:intergenic
ATGAAATCAATTTGTTTAAG+TGG 0.308286 6_4:+43783360 None:intergenic
GAAATAGAAAACCATCATTT+AGG 0.308861 6_4:+43781188 None:intergenic
TATGTCAGAGGATTTCTTAT+TGG 0.311118 6_4:-43781221 Msa0988920:CDS
ATCCCACCATTGTACTTTGA+TGG 0.329384 6_4:-43783423 Msa0988920:CDS
AACATTATCACTAGTGTTCA+TGG 0.339452 6_4:-43782871 Msa0988920:CDS
GTGATTGATTGAGCTTTCTT+GGG 0.361329 6_4:+43782725 None:intergenic
TTTCCAACAGCGGGTAATCT+AGG 0.362673 6_4:+43781586 None:intergenic
AGGCTTTGATGACTTGTTCT+GGG 0.370593 6_4:+43781606 None:intergenic
TTGGTGTTTGAGATGGAGAT+GGG 0.375368 6_4:+43783496 None:intergenic
TTGGTAGGCATGGGGTTAAC+GGG 0.398141 6_4:+43783045 None:intergenic
ATTGGTAGGCATGGGGTTAA+CGG 0.400087 6_4:+43783044 None:intergenic
GGGGTTTGCATAATAGTGAT+TGG 0.401973 6_4:+43783234 None:intergenic
ATTATTGGTGGTGGAGGTGG+TGG 0.403407 6_4:+43783464 None:intergenic
AATTAACAACAAGGTAACTT+TGG 0.407679 6_4:-43782518 Msa0988920:CDS
GACATTATTGGTGGTGGAGG+TGG 0.407766 6_4:+43783461 None:intergenic
GTCAAGTTGGTGGTGGTGCT+AGG 0.408314 6_4:+43782895 None:intergenic
TAGTGGTAGTAGTTGGGATG+GGG 0.409163 6_4:+43783286 None:intergenic
GAGGTGGTGGTGACAGTGGT+TGG 0.409523 6_4:+43783477 None:intergenic
AAGGCGTTGGTAGTGGTCAT+GGG 0.410054 6_4:+43782970 None:intergenic
TGTAATGAGGGTTGGGATAG+TGG 0.411087 6_4:+43783269 None:intergenic
GGGTTTGCATAATAGTGATT+GGG 0.411270 6_4:+43783235 None:intergenic
TTGGAGAGAGGTGGTGGGAT+TGG 0.411580 6_4:+43783311 None:intergenic
AATTACCCAACACCAGATCT+AGG 0.412137 6_4:-43782696 Msa0988920:CDS
AAGGAACAGGGTTATTGTCT+TGG 0.412589 6_4:+43783388 None:intergenic
TCCAATGGACATTGACGATT+GGG 0.412894 6_4:-43783586 None:intergenic
CAAAACATAATTCAAGAATC+AGG 0.420705 6_4:-43782645 Msa0988920:intron
CAAGCAAGCTTTCAGAAGAT+TGG 0.420791 6_4:-43782480 Msa0988920:CDS
ATTCCCGACCACATAACATT+TGG 0.422243 6_4:-43783198 Msa0988920:CDS
CAACAAGGAATGCAATCAAA+TGG 0.425635 6_4:-43783102 Msa0988920:CDS
TTCTCTAGCAGCGGGTAAAT+GGG 0.428823 6_4:+43781426 None:intergenic
AAGTGGTTGTAATGAGGGTT+GGG 0.438687 6_4:+43783262 None:intergenic
AGGAACAGGGTTATTGTCTT+GGG 0.439157 6_4:+43783389 None:intergenic
CTCCAATGGACATTGACGAT+TGG 0.439949 6_4:-43783587 None:intergenic
TGAAATCAATTTGTTTAAGT+GGG 0.440160 6_4:+43783361 None:intergenic
AACACTTGACTGTTATTGTT+TGG 0.445737 6_4:+43782787 None:intergenic
GAAGGCGTTGGTAGTGGTCA+TGG 0.446538 6_4:+43782969 None:intergenic
TTGAAATTATTGGTAGGCAT+GGG 0.449529 6_4:+43783036 None:intergenic
GAACCCGGCTTTGAAATGTT+TGG 0.453733 6_4:+43781550 None:intergenic
GTTGGTGTTTGAGATGGAGA+TGG 0.454612 6_4:+43783495 None:intergenic
TTGGGATAGTGGTAGTAGTT+GGG 0.457739 6_4:+43783280 None:intergenic
AGTGATAATGTTAGTCAAGT+TGG 0.462717 6_4:+43782882 None:intergenic
TTCAATAAAAGAGGCGGGGT+TGG 0.463284 6_4:+43783521 None:intergenic
GTTGGGATAGTGGTAGTAGT+TGG 0.463365 6_4:+43783279 None:intergenic
CGGGAATAGTGGTGGTCGAA+GGG 0.465973 6_4:+43783214 None:intergenic
TCATGAGCATTGCTACTCAT+TGG 0.466745 6_4:+43781337 None:intergenic
GCAGGTAAATGGAACTCTAT+TGG 0.471063 6_4:-43781637 Msa0988920:CDS
ATTAGGTAAAATCCTAGATC+TGG 0.473232 6_4:+43782684 None:intergenic
GGTGGAGGTGGTGGTGACAG+TGG 0.476667 6_4:+43783473 None:intergenic
AGATATGACATTATTGGTGG+TGG 0.477605 6_4:+43783455 None:intergenic
GTACCAAATGTTATGTGGTC+GGG 0.477811 6_4:+43783195 None:intergenic
GTGGTGGTGCTAGGGCTAAT+AGG 0.483423 6_4:+43782904 None:intergenic
GTCACCAAACATTTCAAAGC+CGG 0.485938 6_4:-43781554 Msa0988920:CDS
ATAGAGTTCCATTTACCTGC+TGG 0.487185 6_4:+43781640 None:intergenic
TGTTATGTGGTCGGGAATAG+TGG 0.492886 6_4:+43783203 None:intergenic
TCGGGAATAGTGGTGGTCGA+AGG 0.494738 6_4:+43783213 None:intergenic
AGTGGTAGTAGTTGGGATGG+GGG 0.495977 6_4:+43783287 None:intergenic
GTTAGCGAAGGCGTTGGTAG+TGG 0.498129 6_4:+43782963 None:intergenic
ATTGAAATTATTGGTAGGCA+TGG 0.502253 6_4:+43783035 None:intergenic
GGGGTTTCAATAAAAGAGGC+GGG 0.502543 6_4:+43783516 None:intergenic
TCAAGTTGGTGGTGGTGCTA+GGG 0.503913 6_4:+43782896 None:intergenic
GAAGTGGTTGTAATGAGGGT+TGG 0.505846 6_4:+43783261 None:intergenic
GGGGCTTGGAGAGAGGTGGT+GGG 0.506802 6_4:+43783306 None:intergenic
GAAGGGATTTCTGATTGACT+AGG 0.514003 6_4:+43781469 None:intergenic
CCTTGTTGTTCGATAAGTGT+TGG 0.514290 6_4:+43783117 None:intergenic
AAAAGAGGCGGGGTTGGTAA+AGG 0.516583 6_4:+43783527 None:intergenic
GATTCAATTTCTCTAGCAGC+GGG 0.517766 6_4:+43781418 None:intergenic
AACAAGGAATGCAATCAAAT+GGG 0.517786 6_4:-43783101 Msa0988920:CDS
TCTATAAGTTCAGTTTCTGA+AGG 0.522348 6_4:+43781451 None:intergenic
TCACCAAACATTTCAAAGCC+GGG 0.523908 6_4:-43781553 Msa0988920:CDS
AAGCCTAGATTACCCGCTGT+TGG 0.524427 6_4:-43781589 Msa0988920:CDS
GGATGAAGTGGTTGTAATGA+GGG 0.524605 6_4:+43783257 None:intergenic
AAAATCCTAGATCTGGTGTT+GGG 0.524682 6_4:+43782691 None:intergenic
ACAGTGGTTGGTGTTTGAGA+TGG 0.528977 6_4:+43783489 None:intergenic
GTAAGTCTAGTTGGGGTGCA+AGG 0.531975 6_4:+43782994 None:intergenic
GGGATGAAGTGGTTGTAATG+AGG 0.534322 6_4:+43783256 None:intergenic
AAGGGATTTCTGATTGACTA+GGG 0.535133 6_4:+43781470 None:intergenic
GATAGTGGTAGTAGTTGGGA+TGG 0.537972 6_4:+43783284 None:intergenic
GAGTATTGCATAATCTGAAA+TGG 0.538274 6_4:+43782831 None:intergenic
TCCCAATCGTCAATGTCCAT+TGG 0.539210 6_4:+43783585 None:intergenic
GGAGTATTGAAATTATTGGT+AGG 0.540131 6_4:+43783030 None:intergenic
CACAACAAAAGTGTCCTCTT+CGG 0.542763 6_4:+43781693 None:intergenic
GGTGCAAGGAGTAGTGAGGG+TGG 0.542792 6_4:+43783008 None:intergenic
TGGGGTGCAAGGAGTAGTGA+GGG 0.543951 6_4:+43783005 None:intergenic
AGGAAGGATTTGTGATTCAC+CGG 0.548075 6_4:+43781309 None:intergenic
TGGTGTTTGAGATGGAGATG+GGG 0.548223 6_4:+43783497 None:intergenic
ATAGTGGTAGTAGTTGGGAT+GGG 0.552114 6_4:+43783285 None:intergenic
GCAAGCTTTCAGAAGATTGG+TGG 0.554578 6_4:-43782477 Msa0988920:CDS
ATCACTAACACTAGTGCTCA+TGG 0.555133 6_4:-43783171 Msa0988920:CDS
AGGCGTTGGTAGTGGTCATG+GGG 0.556274 6_4:+43782971 None:intergenic
GTGCAAGGAGTAGTGAGGGT+GGG 0.556644 6_4:+43783009 None:intergenic
TCTGACATATCAGTCATGCT+TGG 0.560481 6_4:+43781235 None:intergenic
TGATTGATTGAGCTTTCTTG+GGG 0.561989 6_4:+43782726 None:intergenic
TAAAATCCTAGATCTGGTGT+TGG 0.562048 6_4:+43782690 None:intergenic
GAAATCAATTTGTTTAAGTG+GGG 0.563722 6_4:+43783362 None:intergenic
AGCCTTGTTGCTATTGACAA+AGG 0.567049 6_4:+43783554 None:intergenic
GGTTTGCATAATAGTGATTG+GGG 0.568258 6_4:+43783236 None:intergenic
AACCATCAAAGTACAATGGT+GGG 0.568923 6_4:+43783421 None:intergenic
CAGGGTTATTGTCTTGGGCA+AGG 0.568974 6_4:+43783394 None:intergenic
ATGTCGATCATCCAAAGAGC+AGG 0.571282 6_4:-43781507 Msa0988920:CDS
TGAAATTATTGGTAGGCATG+GGG 0.572356 6_4:+43783037 None:intergenic
TTTCAGAAGATTGGTGGTCG+TGG 0.572428 6_4:-43782471 Msa0988920:CDS
AATAGTGATTGGGGATGAAG+TGG 0.575835 6_4:+43783245 None:intergenic
ATGTGAAAAGACCTTGGATG+TGG 0.577521 6_4:+43782415 None:intergenic
AAACCATCAAAGTACAATGG+TGG 0.578032 6_4:+43783420 None:intergenic
CTATAAGTTCAGTTTCTGAA+GGG 0.578383 6_4:+43781452 None:intergenic
TGAAATGGTAGGATATTGAC+TGG 0.578765 6_4:+43782846 None:intergenic
AGGAGATATGACATTATTGG+TGG 0.586877 6_4:+43783452 None:intergenic
AGATGGGGTTTCAATAAAAG+AGG 0.589549 6_4:+43783512 None:intergenic
TATGACATTATTGGTGGTGG+AGG 0.590376 6_4:+43783458 None:intergenic
AAAGCTTGCTTGTTCTCACA+TGG 0.591876 6_4:+43782491 None:intergenic
GGTAAATGGAACTCTATTGG+TGG 0.596193 6_4:-43781634 Msa0988920:CDS
ATTGCATAATCTGAAATGGT+AGG 0.596503 6_4:+43782835 None:intergenic
CTAATAGGTCCAGTGGTGGT+CGG 0.599128 6_4:+43782919 None:intergenic
TGTGGGGTTAGCGAAGGCGT+TGG 0.601308 6_4:+43782957 None:intergenic
GACCTGAAATTTCCAACAGC+GGG 0.604025 6_4:+43781577 None:intergenic
TTGGGGTGCAAGGAGTAGTG+AGG 0.605374 6_4:+43783004 None:intergenic
TGATTGTACCAAATGTTATG+TGG 0.605424 6_4:+43783190 None:intergenic
TGATTCAATTTCTCTAGCAG+CGG 0.608307 6_4:+43781417 None:intergenic
CTTTGATGACTTGTTCTGGG+AGG 0.611922 6_4:+43781609 None:intergenic
TTCCTTTGTCAATAGCAACA+AGG 0.614355 6_4:-43783556 Msa0988920:CDS
ATAGAAAACCATCATTTAGG+TGG 0.614973 6_4:+43781191 None:intergenic
GTAAATGGAACTCTATTGGT+GGG 0.619020 6_4:-43781633 Msa0988920:CDS
GGGAATAGTGGTGGTCGAAG+GGG 0.619032 6_4:+43783215 None:intergenic
GCTAGGGCTAATAGGTCCAG+TGG 0.619531 6_4:+43782912 None:intergenic
TTAGCGGGTCCCCACATCCA+AGG 0.623038 6_4:-43782426 Msa0988920:intron
TGTGAAAAGACCTTGGATGT+GGG 0.630725 6_4:+43782416 None:intergenic
CCAACACTTATCGAACAACA+AGG 0.631435 6_4:-43783117 Msa0988920:CDS
TGTACCAAATGTTATGTGGT+CGG 0.633920 6_4:+43783194 None:intergenic
GATAATGTTAGTCAAGTTGG+TGG 0.636625 6_4:+43782885 None:intergenic
AGCAATGCTCATGATTACTC+CGG 0.637217 6_4:-43781328 Msa0988920:CDS
GTGAAAAGACCTTGGATGTG+GGG 0.637723 6_4:+43782417 None:intergenic
AGTAGTTGTGGGGTTAGCGA+AGG 0.638079 6_4:+43782951 None:intergenic
TGGGGTTTCAATAAAAGAGG+CGG 0.641388 6_4:+43783515 None:intergenic
AATGTTAGTCAAGTTGGTGG+TGG 0.642962 6_4:+43782888 None:intergenic
CTAAAACCATCAAAGTACAA+TGG 0.649699 6_4:+43783417 None:intergenic
AAGCATGACTGATATGTCAG+AGG 0.660878 6_4:-43781233 Msa0988920:CDS
GATTGATTGAGCTTTCTTGG+GGG 0.688353 6_4:+43782727 None:intergenic
GGCGTTGGTAGTGGTCATGG+GGG 0.692398 6_4:+43782972 None:intergenic
GGGTTTCAATAAAAGAGGCG+GGG 0.696209 6_4:+43783517 None:intergenic
AGGGCTAATAGGTCCAGTGG+TGG 0.699877 6_4:+43782915 None:intergenic
CGACCTGAAATTTCCAACAG+CGG 0.704425 6_4:+43781576 None:intergenic
TATGTGGTCGGGAATAGTGG+TGG 0.724076 6_4:+43783206 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAAATTAATGTATTTT+TGG - chr6_4:43782647-43782666 Msa0988920:CDS 10.0%
!!! TATCAAAATTAATGTATTTT+TGG - chr6_4:43782647-43782666 Msa0988920:CDS 10.0%
!! ACTAAAAATATCTGTTTATT+TGG + chr6_4:43782912-43782931 None:intergenic 15.0%
!! ACTAAAAATATCTGTTTATT+TGG + chr6_4:43782912-43782931 None:intergenic 15.0%
!!! TGAAATCAATTTGTTTAAGT+GGG + chr6_4:43781407-43781426 None:intergenic 20.0%
!!! ATGAAATCAATTTGTTTAAG+TGG + chr6_4:43781408-43781427 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_4:43782238-43782257 Msa0988920:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_4:43782663-43782682 Msa0988920:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_4:43782708-43782727 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+AGG + chr6_4:43782822-43782841 None:intergenic 20.0%
!! ATTAAAGTGATATGATTTAG+AGG - chr6_4:43782946-43782965 Msa0988920:CDS 20.0%
!!! TGAAATCAATTTGTTTAAGT+GGG + chr6_4:43781407-43781426 None:intergenic 20.0%
!!! ATGAAATCAATTTGTTTAAG+TGG + chr6_4:43781408-43781427 None:intergenic 20.0%
!! TTACAGAAAAATTAACAACA+AGG - chr6_4:43782238-43782257 Msa0988920:intron 20.0%
!!! TTTTTGGTTTAAGTACAAAA+TGG - chr6_4:43782663-43782682 Msa0988920:CDS 20.0%
!!! TAACAATCAAAACTTTTACA+TGG + chr6_4:43782708-43782727 None:intergenic 20.0%
!! AAGGATTAATATGAATATTC+AGG + chr6_4:43782822-43782841 None:intergenic 20.0%
!! ATTAAAGTGATATGATTTAG+AGG - chr6_4:43782946-43782965 Msa0988920:CDS 20.0%
!! GAAATCAATTTGTTTAAGTG+GGG + chr6_4:43781406-43781425 None:intergenic 25.0%
! CAAAACATAATTCAAGAATC+AGG - chr6_4:43782120-43782139 Msa0988920:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_4:43782247-43782266 Msa0988920:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_4:43782436-43782455 Msa0988920:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_4:43782848-43782867 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_4:43782850-43782869 Msa0988920:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_4:43782851-43782870 Msa0988920:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_4:43782985-43783004 Msa0988920:CDS 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_4:43783377-43783396 None:intergenic 25.0%
! GAAATAGAAAACCATCATTT+AGG + chr6_4:43783580-43783599 None:intergenic 25.0%
!! GAAATCAATTTGTTTAAGTG+GGG + chr6_4:43781406-43781425 None:intergenic 25.0%
! CAAAACATAATTCAAGAATC+AGG - chr6_4:43782120-43782139 Msa0988920:intron 25.0%
! AATTAACAACAAGGTAACTT+TGG - chr6_4:43782247-43782266 Msa0988920:intron 25.0%
! TAATACAAACATGATACCTT+GGG - chr6_4:43782436-43782455 Msa0988920:CDS 25.0%
! AATGAGTGATATATTTGTTC+AGG + chr6_4:43782848-43782867 None:intergenic 25.0%
! ACAAATATATCACTCATTTC+AGG - chr6_4:43782850-43782869 Msa0988920:CDS 25.0%
! CAAATATATCACTCATTTCA+GGG - chr6_4:43782851-43782870 Msa0988920:CDS 25.0%
!! CAATCTATGAATGATTTTTC+AGG - chr6_4:43782985-43783004 Msa0988920:CDS 25.0%
!! GAAAACAAGTTTTCAACATT+AGG + chr6_4:43783377-43783396 None:intergenic 25.0%
! GAAATAGAAAACCATCATTT+AGG + chr6_4:43783580-43783599 None:intergenic 25.0%
TTGAGGAGATATGACATTAT+TGG + chr6_4:43781319-43781338 None:intergenic 30.0%
CTAAAACCATCAAAGTACAA+TGG + chr6_4:43781351-43781370 None:intergenic 30.0%
ATTTGTTTAAGTGGGGAAAA+AGG + chr6_4:43781399-43781418 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_4:43781578-43781597 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_4:43781637-43781656 None:intergenic 30.0%
AACAAGGAATGCAATCAAAT+GGG - chr6_4:43781664-43781683 Msa0988920:CDS 30.0%
TTGAAATTATTGGTAGGCAT+GGG + chr6_4:43781732-43781751 None:intergenic 30.0%
ATTGAAATTATTGGTAGGCA+TGG + chr6_4:43781733-43781752 None:intergenic 30.0%
!! GGAGTATTGAAATTATTGGT+AGG + chr6_4:43781738-43781757 None:intergenic 30.0%
! AGTGATAATGTTAGTCAAGT+TGG + chr6_4:43781886-43781905 None:intergenic 30.0%
AACATTATCACTAGTGTTCA+TGG - chr6_4:43781894-43781913 Msa0988920:intron 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_4:43781933-43781952 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_4:43781937-43781956 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_4:43781981-43782000 None:intergenic 30.0%
ATTAGGTAAAATCCTAGATC+TGG + chr6_4:43782084-43782103 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+AGG + chr6_4:43782101-43782120 None:intergenic 30.0%
TATGGACAGAAAAACATTAG+CGG - chr6_4:43782323-43782342 Msa0988920:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_4:43782359-43782378 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_4:43782435-43782454 Msa0988920:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_4:43782449-43782468 Msa0988920:CDS 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_4:43782841-43782860 None:intergenic 30.0%
CTATAAGTTCAGTTTCTGAA+GGG + chr6_4:43783316-43783335 None:intergenic 30.0%
TCTATAAGTTCAGTTTCTGA+AGG + chr6_4:43783317-43783336 None:intergenic 30.0%
!! TAAGTTTGTTTTCTGAAGGA+AGG + chr6_4:43783475-43783494 None:intergenic 30.0%
!! CCAATAAGTTTGTTTTCTGA+AGG + chr6_4:43783479-43783498 None:intergenic 30.0%
CCTTCAGAAAACAAACTTAT+TGG - chr6_4:43783476-43783495 Msa0988920:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_4:43783544-43783563 Msa0988920:CDS 30.0%
ATAGAAAACCATCATTTAGG+TGG + chr6_4:43783577-43783596 None:intergenic 30.0%
TTGAGGAGATATGACATTAT+TGG + chr6_4:43781319-43781338 None:intergenic 30.0%
CTAAAACCATCAAAGTACAA+TGG + chr6_4:43781351-43781370 None:intergenic 30.0%
ATTTGTTTAAGTGGGGAAAA+AGG + chr6_4:43781399-43781418 None:intergenic 30.0%
TGATTGTACCAAATGTTATG+TGG + chr6_4:43781578-43781597 None:intergenic 30.0%
!! AAGTGTTGGACAATCAAAAA+AGG + chr6_4:43781637-43781656 None:intergenic 30.0%
AACAAGGAATGCAATCAAAT+GGG - chr6_4:43781664-43781683 Msa0988920:CDS 30.0%
TTGAAATTATTGGTAGGCAT+GGG + chr6_4:43781732-43781751 None:intergenic 30.0%
ATTGAAATTATTGGTAGGCA+TGG + chr6_4:43781733-43781752 None:intergenic 30.0%
!! GGAGTATTGAAATTATTGGT+AGG + chr6_4:43781738-43781757 None:intergenic 30.0%
! AGTGATAATGTTAGTCAAGT+TGG + chr6_4:43781886-43781905 None:intergenic 30.0%
AACATTATCACTAGTGTTCA+TGG - chr6_4:43781894-43781913 Msa0988920:intron 30.0%
! ATTGCATAATCTGAAATGGT+AGG + chr6_4:43781933-43781952 None:intergenic 30.0%
! GAGTATTGCATAATCTGAAA+TGG + chr6_4:43781937-43781956 None:intergenic 30.0%
AACACTTGACTGTTATTGTT+TGG + chr6_4:43781981-43782000 None:intergenic 30.0%
ATTAGGTAAAATCCTAGATC+TGG + chr6_4:43782084-43782103 None:intergenic 30.0%
! GCTTTTTGTGAATCTGAATT+AGG + chr6_4:43782101-43782120 None:intergenic 30.0%
TATGGACAGAAAAACATTAG+CGG - chr6_4:43782323-43782342 Msa0988920:intron 30.0%
! TTTTGAATGTGAAAAGACCT+TGG + chr6_4:43782359-43782378 None:intergenic 30.0%
CTAATACAAACATGATACCT+TGG - chr6_4:43782435-43782454 Msa0988920:CDS 30.0%
!!! ATACCTTGGGTTTTAAATAG+TGG - chr6_4:43782449-43782468 Msa0988920:CDS 30.0%
GATATATTTGTTCAGGAACA+AGG + chr6_4:43782841-43782860 None:intergenic 30.0%
CTATAAGTTCAGTTTCTGAA+GGG + chr6_4:43783316-43783335 None:intergenic 30.0%
TCTATAAGTTCAGTTTCTGA+AGG + chr6_4:43783317-43783336 None:intergenic 30.0%
!! TAAGTTTGTTTTCTGAAGGA+AGG + chr6_4:43783475-43783494 None:intergenic 30.0%
!! CCAATAAGTTTGTTTTCTGA+AGG + chr6_4:43783479-43783498 None:intergenic 30.0%
CCTTCAGAAAACAAACTTAT+TGG - chr6_4:43783476-43783495 Msa0988920:CDS 30.0%
TATGTCAGAGGATTTCTTAT+TGG - chr6_4:43783544-43783563 Msa0988920:CDS 30.0%
ATAGAAAACCATCATTTAGG+TGG + chr6_4:43783577-43783596 None:intergenic 30.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_4:43781209-43781228 Msa0988920:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_4:43781256-43781275 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_4:43781313-43781332 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_4:43781316-43781335 None:intergenic 35.0%
!! TACAATGGTGGGATATTTTG+AGG + chr6_4:43781336-43781355 None:intergenic 35.0%
AACCATCAAAGTACAATGGT+GGG + chr6_4:43781347-43781366 None:intergenic 35.0%
AAACCATCAAAGTACAATGG+TGG + chr6_4:43781348-43781367 None:intergenic 35.0%
GGTTTGCATAATAGTGATTG+GGG + chr6_4:43781532-43781551 None:intergenic 35.0%
GGGTTTGCATAATAGTGATT+GGG + chr6_4:43781533-43781552 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_4:43781574-43781593 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_4:43781633-43781652 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_4:43781634-43781653 None:intergenic 35.0%
CAACAAGGAATGCAATCAAA+TGG - chr6_4:43781663-43781682 Msa0988920:CDS 35.0%
TGAAATTATTGGTAGGCATG+GGG + chr6_4:43781731-43781750 None:intergenic 35.0%
!! GGTGGGAGTATTGAAATTAT+TGG + chr6_4:43781742-43781761 None:intergenic 35.0%
GAGTGAAAAAAGTAGTTGTG+GGG + chr6_4:43781827-43781846 None:intergenic 35.0%
GGAGTGAAAAAAGTAGTTGT+GGG + chr6_4:43781828-43781847 None:intergenic 35.0%
!! GATAATGTTAGTCAAGTTGG+TGG + chr6_4:43781883-43781902 None:intergenic 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_4:43781922-43781941 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_4:43782042-43782061 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_4:43782043-43782062 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_4:43782044-43782063 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_4:43782077-43782096 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_4:43782078-43782097 None:intergenic 35.0%
ATGGACAGAAAAACATTAGC+GGG - chr6_4:43782324-43782343 Msa0988920:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_4:43782455-43782474 None:intergenic 35.0%
AAGACCACAATTCAGTGTAA+TGG + chr6_4:43782496-43782515 None:intergenic 35.0%
! CTGAATTGTGGTCTTAATCT+AGG - chr6_4:43782501-43782520 Msa0988920:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_4:43782854-43782873 Msa0988920:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_4:43782855-43782874 Msa0988920:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_4:43783083-43783102 Msa0988920:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_4:43783118-43783137 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_4:43783117-43783136 Msa0988920:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_4:43783132-43783151 Msa0988920:CDS 35.0%
ACTTGAATATTCCTGCTCTT+TGG + chr6_4:43783272-43783291 None:intergenic 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_4:43783298-43783317 None:intergenic 35.0%
TGATTCAATTTCTCTAGCAG+CGG + chr6_4:43783351-43783370 None:intergenic 35.0%
!! GATTTTGACCACCTAAATGA+TGG - chr6_4:43783566-43783585 Msa0988920:CDS 35.0%
TTCCTTTGTCAATAGCAACA+AGG - chr6_4:43781209-43781228 Msa0988920:CDS 35.0%
AGATGGGGTTTCAATAAAAG+AGG + chr6_4:43781256-43781275 None:intergenic 35.0%
AGATATGACATTATTGGTGG+TGG + chr6_4:43781313-43781332 None:intergenic 35.0%
AGGAGATATGACATTATTGG+TGG + chr6_4:43781316-43781335 None:intergenic 35.0%
!! TACAATGGTGGGATATTTTG+AGG + chr6_4:43781336-43781355 None:intergenic 35.0%
AACCATCAAAGTACAATGGT+GGG + chr6_4:43781347-43781366 None:intergenic 35.0%
AAACCATCAAAGTACAATGG+TGG + chr6_4:43781348-43781367 None:intergenic 35.0%
GGTTTGCATAATAGTGATTG+GGG + chr6_4:43781532-43781551 None:intergenic 35.0%
GGGTTTGCATAATAGTGATT+GGG + chr6_4:43781533-43781552 None:intergenic 35.0%
TGTACCAAATGTTATGTGGT+CGG + chr6_4:43781574-43781593 None:intergenic 35.0%
GTTGGACAATCAAAAAAGGT+GGG + chr6_4:43781633-43781652 None:intergenic 35.0%
TGTTGGACAATCAAAAAAGG+TGG + chr6_4:43781634-43781653 None:intergenic 35.0%
CAACAAGGAATGCAATCAAA+TGG - chr6_4:43781663-43781682 Msa0988920:CDS 35.0%
TGAAATTATTGGTAGGCATG+GGG + chr6_4:43781731-43781750 None:intergenic 35.0%
!! GGTGGGAGTATTGAAATTAT+TGG + chr6_4:43781742-43781761 None:intergenic 35.0%
GAGTGAAAAAAGTAGTTGTG+GGG + chr6_4:43781827-43781846 None:intergenic 35.0%
GGAGTGAAAAAAGTAGTTGT+GGG + chr6_4:43781828-43781847 None:intergenic 35.0%
!! GATAATGTTAGTCAAGTTGG+TGG + chr6_4:43781883-43781902 None:intergenic 35.0%
TGAAATGGTAGGATATTGAC+TGG + chr6_4:43781922-43781941 None:intergenic 35.0%
TGATTGATTGAGCTTTCTTG+GGG + chr6_4:43782042-43782061 None:intergenic 35.0%
GTGATTGATTGAGCTTTCTT+GGG + chr6_4:43782043-43782062 None:intergenic 35.0%
TGTGATTGATTGAGCTTTCT+TGG + chr6_4:43782044-43782063 None:intergenic 35.0%
AAAATCCTAGATCTGGTGTT+GGG + chr6_4:43782077-43782096 None:intergenic 35.0%
TAAAATCCTAGATCTGGTGT+TGG + chr6_4:43782078-43782097 None:intergenic 35.0%
ATGGACAGAAAAACATTAGC+GGG - chr6_4:43782324-43782343 Msa0988920:intron 35.0%
! AGACCACTATTTAAAACCCA+AGG + chr6_4:43782455-43782474 None:intergenic 35.0%
AAGACCACAATTCAGTGTAA+TGG + chr6_4:43782496-43782515 None:intergenic 35.0%
! CTGAATTGTGGTCTTAATCT+AGG - chr6_4:43782501-43782520 Msa0988920:CDS 35.0%
ATATATCACTCATTTCAGGG+AGG - chr6_4:43782854-43782873 Msa0988920:CDS 35.0%
TATATCACTCATTTCAGGGA+GGG - chr6_4:43782855-43782874 Msa0988920:CDS 35.0%
!! ACTTTTGTTGTGACGTTTGT+TGG - chr6_4:43783083-43783102 Msa0988920:CDS 35.0%
!!! ATTTACCTGCTGGTTTTTCA+TGG + chr6_4:43783118-43783137 None:intergenic 35.0%
ATGAAAAACCAGCAGGTAAA+TGG - chr6_4:43783117-43783136 Msa0988920:CDS 35.0%
GTAAATGGAACTCTATTGGT+GGG - chr6_4:43783132-43783151 Msa0988920:CDS 35.0%
ACTTGAATATTCCTGCTCTT+TGG + chr6_4:43783272-43783291 None:intergenic 35.0%
AAGGGATTTCTGATTGACTA+GGG + chr6_4:43783298-43783317 None:intergenic 35.0%
TGATTCAATTTCTCTAGCAG+CGG + chr6_4:43783351-43783370 None:intergenic 35.0%
!! GATTTTGACCACCTAAATGA+TGG - chr6_4:43783566-43783585 Msa0988920:CDS 35.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_4:43781214-43781233 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_4:43781253-43781272 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_4:43781272-43781291 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_4:43781310-43781329 None:intergenic 40.0%
ATCCCACCATTGTACTTTGA+TGG - chr6_4:43781342-43781361 Msa0988920:CDS 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_4:43781379-43781398 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_4:43781380-43781399 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_4:43781392-43781411 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_4:43781393-43781412 None:intergenic 40.0%
ATAGTGGTAGTAGTTGGGAT+GGG + chr6_4:43781483-43781502 None:intergenic 40.0%
! TTGGGATAGTGGTAGTAGTT+GGG + chr6_4:43781488-43781507 None:intergenic 40.0%
AAGTGGTTGTAATGAGGGTT+GGG + chr6_4:43781506-43781525 None:intergenic 40.0%
GGATGAAGTGGTTGTAATGA+GGG + chr6_4:43781511-43781530 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_4:43781523-43781542 None:intergenic 40.0%
GGGGTTTGCATAATAGTGAT+TGG + chr6_4:43781534-43781553 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_4:43781567-43781586 Msa0988920:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_4:43781573-43781592 None:intergenic 40.0%
ATCACTAACACTAGTGCTCA+TGG - chr6_4:43781594-43781613 Msa0988920:CDS 40.0%
!! CCTTGTTGTTCGATAAGTGT+TGG + chr6_4:43781651-43781670 None:intergenic 40.0%
CCAACACTTATCGAACAACA+AGG - chr6_4:43781648-43781667 Msa0988920:CDS 40.0%
CGGAGTGAAAAAAGTAGTTG+TGG + chr6_4:43781829-43781848 None:intergenic 40.0%
!! AATGTTAGTCAAGTTGGTGG+TGG + chr6_4:43781880-43781899 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_4:43782041-43782060 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_4:43782069-43782088 Msa0988920:intron 40.0%
! AAAGCTTGCTTGTTCTCACA+TGG + chr6_4:43782277-43782296 None:intergenic 40.0%
CAAGCAAGCTTTCAGAAGAT+TGG - chr6_4:43782285-43782304 Msa0988920:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_4:43782352-43782371 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_4:43782353-43782372 None:intergenic 40.0%
ATTCAGTGTAATGGCAAGGA+TGG + chr6_4:43782487-43782506 None:intergenic 40.0%
CACAATTCAGTGTAATGGCA+AGG + chr6_4:43782491-43782510 None:intergenic 40.0%
CTTGCCATTACACTGAATTG+TGG - chr6_4:43782489-43782508 Msa0988920:CDS 40.0%
ACAAAAAAGTGACACCGAAG+AGG - chr6_4:43783058-43783077 Msa0988920:CDS 40.0%
!! CACAACAAAAGTGTCCTCTT+CGG + chr6_4:43783075-43783094 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_4:43783128-43783147 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_4:43783128-43783147 Msa0988920:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_4:43783131-43783150 Msa0988920:CDS 40.0%
!! AGGCTTTGATGACTTGTTCT+GGG + chr6_4:43783162-43783181 None:intergenic 40.0%
!! TAGGCTTTGATGACTTGTTC+TGG + chr6_4:43783163-43783182 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+CGG - chr6_4:43783211-43783230 Msa0988920:CDS 40.0%
TCACCAAACATTTCAAAGCC+GGG - chr6_4:43783212-43783231 Msa0988920:CDS 40.0%
!! ATCGTCACATTTTGAGAACC+CGG + chr6_4:43783233-43783252 None:intergenic 40.0%
GAAGGGATTTCTGATTGACT+AGG + chr6_4:43783299-43783318 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+GGG + chr6_4:43783350-43783369 None:intergenic 40.0%
! TCATGAGCATTGCTACTCAT+TGG + chr6_4:43783431-43783450 None:intergenic 40.0%
AGCAATGCTCATGATTACTC+CGG - chr6_4:43783437-43783456 Msa0988920:CDS 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_4:43783459-43783478 None:intergenic 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_4:43783533-43783552 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_4:43783532-43783551 Msa0988920:CDS 40.0%
!! AGCCTTGTTGCTATTGACAA+AGG + chr6_4:43781214-43781233 None:intergenic 40.0%
TGGGGTTTCAATAAAAGAGG+CGG + chr6_4:43781253-43781272 None:intergenic 40.0%
! TTGGTGTTTGAGATGGAGAT+GGG + chr6_4:43781272-43781291 None:intergenic 40.0%
!! TATGACATTATTGGTGGTGG+AGG + chr6_4:43781310-43781329 None:intergenic 40.0%
ATCCCACCATTGTACTTTGA+TGG - chr6_4:43781342-43781361 Msa0988920:CDS 40.0%
AGGAACAGGGTTATTGTCTT+GGG + chr6_4:43781379-43781398 None:intergenic 40.0%
AAGGAACAGGGTTATTGTCT+TGG + chr6_4:43781380-43781399 None:intergenic 40.0%
TAAGTGGGGAAAAAGGAACA+GGG + chr6_4:43781392-43781411 None:intergenic 40.0%
TTAAGTGGGGAAAAAGGAAC+AGG + chr6_4:43781393-43781412 None:intergenic 40.0%
ATAGTGGTAGTAGTTGGGAT+GGG + chr6_4:43781483-43781502 None:intergenic 40.0%
! TTGGGATAGTGGTAGTAGTT+GGG + chr6_4:43781488-43781507 None:intergenic 40.0%
AAGTGGTTGTAATGAGGGTT+GGG + chr6_4:43781506-43781525 None:intergenic 40.0%
GGATGAAGTGGTTGTAATGA+GGG + chr6_4:43781511-43781530 None:intergenic 40.0%
AATAGTGATTGGGGATGAAG+TGG + chr6_4:43781523-43781542 None:intergenic 40.0%
GGGGTTTGCATAATAGTGAT+TGG + chr6_4:43781534-43781553 None:intergenic 40.0%
ATTCCCGACCACATAACATT+TGG - chr6_4:43781567-43781586 Msa0988920:CDS 40.0%
GTACCAAATGTTATGTGGTC+GGG + chr6_4:43781573-43781592 None:intergenic 40.0%
ATCACTAACACTAGTGCTCA+TGG - chr6_4:43781594-43781613 Msa0988920:CDS 40.0%
!! CCTTGTTGTTCGATAAGTGT+TGG + chr6_4:43781651-43781670 None:intergenic 40.0%
CCAACACTTATCGAACAACA+AGG - chr6_4:43781648-43781667 Msa0988920:CDS 40.0%
CGGAGTGAAAAAAGTAGTTG+TGG + chr6_4:43781829-43781848 None:intergenic 40.0%
!! AATGTTAGTCAAGTTGGTGG+TGG + chr6_4:43781880-43781899 None:intergenic 40.0%
GATTGATTGAGCTTTCTTGG+GGG + chr6_4:43782041-43782060 None:intergenic 40.0%
AATTACCCAACACCAGATCT+AGG - chr6_4:43782069-43782088 Msa0988920:intron 40.0%
! AAAGCTTGCTTGTTCTCACA+TGG + chr6_4:43782277-43782296 None:intergenic 40.0%
CAAGCAAGCTTTCAGAAGAT+TGG - chr6_4:43782285-43782304 Msa0988920:intron 40.0%
TGTGAAAAGACCTTGGATGT+GGG + chr6_4:43782352-43782371 None:intergenic 40.0%
ATGTGAAAAGACCTTGGATG+TGG + chr6_4:43782353-43782372 None:intergenic 40.0%
ATTCAGTGTAATGGCAAGGA+TGG + chr6_4:43782487-43782506 None:intergenic 40.0%
CACAATTCAGTGTAATGGCA+AGG + chr6_4:43782491-43782510 None:intergenic 40.0%
CTTGCCATTACACTGAATTG+TGG - chr6_4:43782489-43782508 Msa0988920:CDS 40.0%
ACAAAAAAGTGACACCGAAG+AGG - chr6_4:43783058-43783077 Msa0988920:CDS 40.0%
!! CACAACAAAAGTGTCCTCTT+CGG + chr6_4:43783075-43783094 None:intergenic 40.0%
ATAGAGTTCCATTTACCTGC+TGG + chr6_4:43783128-43783147 None:intergenic 40.0%
GCAGGTAAATGGAACTCTAT+TGG - chr6_4:43783128-43783147 Msa0988920:CDS 40.0%
GGTAAATGGAACTCTATTGG+TGG - chr6_4:43783131-43783150 Msa0988920:CDS 40.0%
!! AGGCTTTGATGACTTGTTCT+GGG + chr6_4:43783162-43783181 None:intergenic 40.0%
!! TAGGCTTTGATGACTTGTTC+TGG + chr6_4:43783163-43783182 None:intergenic 40.0%
GTCACCAAACATTTCAAAGC+CGG - chr6_4:43783211-43783230 Msa0988920:CDS 40.0%
TCACCAAACATTTCAAAGCC+GGG - chr6_4:43783212-43783231 Msa0988920:CDS 40.0%
!! ATCGTCACATTTTGAGAACC+CGG + chr6_4:43783233-43783252 None:intergenic 40.0%
GAAGGGATTTCTGATTGACT+AGG + chr6_4:43783299-43783318 None:intergenic 40.0%
GATTCAATTTCTCTAGCAGC+GGG + chr6_4:43783350-43783369 None:intergenic 40.0%
! TCATGAGCATTGCTACTCAT+TGG + chr6_4:43783431-43783450 None:intergenic 40.0%
AGCAATGCTCATGATTACTC+CGG - chr6_4:43783437-43783456 Msa0988920:CDS 40.0%
AGGAAGGATTTGTGATTCAC+CGG + chr6_4:43783459-43783478 None:intergenic 40.0%
TCTGACATATCAGTCATGCT+TGG + chr6_4:43783533-43783552 None:intergenic 40.0%
AAGCATGACTGATATGTCAG+AGG - chr6_4:43783532-43783551 Msa0988920:CDS 40.0%
TTCAATAAAAGAGGCGGGGT+TGG + chr6_4:43781247-43781266 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_4:43781251-43781270 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_4:43781252-43781271 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_4:43781271-43781290 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_4:43781273-43781292 None:intergenic 45.0%
! ACAGTGGTTGGTGTTTGAGA+TGG + chr6_4:43781279-43781298 None:intergenic 45.0%
TAGTGGTAGTAGTTGGGATG+GGG + chr6_4:43781482-43781501 None:intergenic 45.0%
! GATAGTGGTAGTAGTTGGGA+TGG + chr6_4:43781484-43781503 None:intergenic 45.0%
! GTTGGGATAGTGGTAGTAGT+TGG + chr6_4:43781489-43781508 None:intergenic 45.0%
TGTAATGAGGGTTGGGATAG+TGG + chr6_4:43781499-43781518 None:intergenic 45.0%
GAAGTGGTTGTAATGAGGGT+TGG + chr6_4:43781507-43781526 None:intergenic 45.0%
GGGATGAAGTGGTTGTAATG+AGG + chr6_4:43781512-43781531 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_4:43781565-43781584 None:intergenic 45.0%
ATTGGTAGGCATGGGGTTAA+CGG + chr6_4:43781724-43781743 None:intergenic 45.0%
TCATGGGGGTAAGTCTAGTT+GGG + chr6_4:43781782-43781801 None:intergenic 45.0%
GCAAGCTTTCAGAAGATTGG+TGG - chr6_4:43782288-43782307 Msa0988920:intron 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_4:43782294-43782313 Msa0988920:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_4:43782305-43782324 Msa0988920:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_4:43782351-43782370 None:intergenic 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_4:43783110-43783129 Msa0988920:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_4:43783159-43783178 None:intergenic 45.0%
TTTCCAACAGCGGGTAATCT+AGG + chr6_4:43783182-43783201 None:intergenic 45.0%
TACCCGCTGTTGGAAATTTC+AGG - chr6_4:43783186-43783205 Msa0988920:CDS 45.0%
GACCTGAAATTTCCAACAGC+GGG + chr6_4:43783191-43783210 None:intergenic 45.0%
CGACCTGAAATTTCCAACAG+CGG + chr6_4:43783192-43783211 None:intergenic 45.0%
!! GAACCCGGCTTTGAAATGTT+TGG + chr6_4:43783218-43783237 None:intergenic 45.0%
ATGTCGATCATCCAAAGAGC+AGG - chr6_4:43783258-43783277 Msa0988920:CDS 45.0%
TTCTCTAGCAGCGGGTAAAT+GGG + chr6_4:43783342-43783361 None:intergenic 45.0%
TTTCTCTAGCAGCGGGTAAA+TGG + chr6_4:43783343-43783362 None:intergenic 45.0%
TTCAATAAAAGAGGCGGGGT+TGG + chr6_4:43781247-43781266 None:intergenic 45.0%
GGGTTTCAATAAAAGAGGCG+GGG + chr6_4:43781251-43781270 None:intergenic 45.0%
GGGGTTTCAATAAAAGAGGC+GGG + chr6_4:43781252-43781271 None:intergenic 45.0%
! TGGTGTTTGAGATGGAGATG+GGG + chr6_4:43781271-43781290 None:intergenic 45.0%
! GTTGGTGTTTGAGATGGAGA+TGG + chr6_4:43781273-43781292 None:intergenic 45.0%
! ACAGTGGTTGGTGTTTGAGA+TGG + chr6_4:43781279-43781298 None:intergenic 45.0%
TAGTGGTAGTAGTTGGGATG+GGG + chr6_4:43781482-43781501 None:intergenic 45.0%
! GATAGTGGTAGTAGTTGGGA+TGG + chr6_4:43781484-43781503 None:intergenic 45.0%
! GTTGGGATAGTGGTAGTAGT+TGG + chr6_4:43781489-43781508 None:intergenic 45.0%
TGTAATGAGGGTTGGGATAG+TGG + chr6_4:43781499-43781518 None:intergenic 45.0%
GAAGTGGTTGTAATGAGGGT+TGG + chr6_4:43781507-43781526 None:intergenic 45.0%
GGGATGAAGTGGTTGTAATG+AGG + chr6_4:43781512-43781531 None:intergenic 45.0%
TGTTATGTGGTCGGGAATAG+TGG + chr6_4:43781565-43781584 None:intergenic 45.0%
ATTGGTAGGCATGGGGTTAA+CGG + chr6_4:43781724-43781743 None:intergenic 45.0%
TCATGGGGGTAAGTCTAGTT+GGG + chr6_4:43781782-43781801 None:intergenic 45.0%
GCAAGCTTTCAGAAGATTGG+TGG - chr6_4:43782288-43782307 Msa0988920:intron 45.0%
! TTTCAGAAGATTGGTGGTCG+TGG - chr6_4:43782294-43782313 Msa0988920:intron 45.0%
TGGTGGTCGTGGACAAAATA+TGG - chr6_4:43782305-43782324 Msa0988920:intron 45.0%
GTGAAAAGACCTTGGATGTG+GGG + chr6_4:43782351-43782370 None:intergenic 45.0%
CACAACCATGAAAAACCAGC+AGG - chr6_4:43783110-43783129 Msa0988920:CDS 45.0%
!! CTTTGATGACTTGTTCTGGG+AGG + chr6_4:43783159-43783178 None:intergenic 45.0%
TTTCCAACAGCGGGTAATCT+AGG + chr6_4:43783182-43783201 None:intergenic 45.0%
TACCCGCTGTTGGAAATTTC+AGG - chr6_4:43783186-43783205 Msa0988920:CDS 45.0%
GACCTGAAATTTCCAACAGC+GGG + chr6_4:43783191-43783210 None:intergenic 45.0%
CGACCTGAAATTTCCAACAG+CGG + chr6_4:43783192-43783211 None:intergenic 45.0%
!! GAACCCGGCTTTGAAATGTT+TGG + chr6_4:43783218-43783237 None:intergenic 45.0%
ATGTCGATCATCCAAAGAGC+AGG - chr6_4:43783258-43783277 Msa0988920:CDS 45.0%
TTCTCTAGCAGCGGGTAAAT+GGG + chr6_4:43783342-43783361 None:intergenic 45.0%
TTTCTCTAGCAGCGGGTAAA+TGG + chr6_4:43783343-43783362 None:intergenic 45.0%
!!! TTAAGATAAATAAATTTTAT+GGG + chr6_4:43782791-43782810 None:intergenic 5.0%
!!! TTTAAGATAAATAAATTTTA+TGG + chr6_4:43782792-43782811 None:intergenic 5.0%
!!! TTAAGATAAATAAATTTTAT+GGG + chr6_4:43782791-43782810 None:intergenic 5.0%
!!! TTTAAGATAAATAAATTTTA+TGG + chr6_4:43782792-43782811 None:intergenic 5.0%
!! AAAAGAGGCGGGGTTGGTAA+AGG + chr6_4:43781241-43781260 None:intergenic 50.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_4:43781304-43781323 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_4:43781307-43781326 None:intergenic 50.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_4:43781374-43781393 None:intergenic 50.0%
AGTGGTAGTAGTTGGGATGG+GGG + chr6_4:43781481-43781500 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_4:43781562-43781581 None:intergenic 50.0%
TTGGTAGGCATGGGGTTAAC+GGG + chr6_4:43781723-43781742 None:intergenic 50.0%
GTAAGTCTAGTTGGGGTGCA+AGG + chr6_4:43781774-43781793 None:intergenic 50.0%
CATGGGGGTAAGTCTAGTTG+GGG + chr6_4:43781781-43781800 None:intergenic 50.0%
GTCATGGGGGTAAGTCTAGT+TGG + chr6_4:43781783-43781802 None:intergenic 50.0%
!! AAGGCGTTGGTAGTGGTCAT+GGG + chr6_4:43781798-43781817 None:intergenic 50.0%
! AGTAGTTGTGGGGTTAGCGA+AGG + chr6_4:43781817-43781836 None:intergenic 50.0%
! TTTTTCACTCCGACCACCAC+TGG - chr6_4:43781837-43781856 Msa0988920:intron 50.0%
CTAATAGGTCCAGTGGTGGT+CGG + chr6_4:43781849-43781868 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGTGCTA+GGG + chr6_4:43781872-43781891 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_4:43782032-43782051 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_4:43782861-43782880 Msa0988920:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_4:43782862-43782881 Msa0988920:CDS 50.0%
AAGCCTAGATTACCCGCTGT+TGG - chr6_4:43783176-43783195 Msa0988920:CDS 50.0%
!! AAAAGAGGCGGGGTTGGTAA+AGG + chr6_4:43781241-43781260 None:intergenic 50.0%
!! ATTATTGGTGGTGGAGGTGG+TGG + chr6_4:43781304-43781323 None:intergenic 50.0%
!! GACATTATTGGTGGTGGAGG+TGG + chr6_4:43781307-43781326 None:intergenic 50.0%
CAGGGTTATTGTCTTGGGCA+AGG + chr6_4:43781374-43781393 None:intergenic 50.0%
AGTGGTAGTAGTTGGGATGG+GGG + chr6_4:43781481-43781500 None:intergenic 50.0%
TATGTGGTCGGGAATAGTGG+TGG + chr6_4:43781562-43781581 None:intergenic 50.0%
TTGGTAGGCATGGGGTTAAC+GGG + chr6_4:43781723-43781742 None:intergenic 50.0%
GTAAGTCTAGTTGGGGTGCA+AGG + chr6_4:43781774-43781793 None:intergenic 50.0%
CATGGGGGTAAGTCTAGTTG+GGG + chr6_4:43781781-43781800 None:intergenic 50.0%
GTCATGGGGGTAAGTCTAGT+TGG + chr6_4:43781783-43781802 None:intergenic 50.0%
!! AAGGCGTTGGTAGTGGTCAT+GGG + chr6_4:43781798-43781817 None:intergenic 50.0%
! AGTAGTTGTGGGGTTAGCGA+AGG + chr6_4:43781817-43781836 None:intergenic 50.0%
! TTTTTCACTCCGACCACCAC+TGG - chr6_4:43781837-43781856 Msa0988920:intron 50.0%
CTAATAGGTCCAGTGGTGGT+CGG + chr6_4:43781849-43781868 None:intergenic 50.0%
!! TCAAGTTGGTGGTGGTGCTA+GGG + chr6_4:43781872-43781891 None:intergenic 50.0%
AGCTTTCTTGGGGGTTGTTG+TGG + chr6_4:43782032-43782051 None:intergenic 50.0%
ACTCATTTCAGGGAGGGAGT+TGG - chr6_4:43782861-43782880 Msa0988920:CDS 50.0%
CTCATTTCAGGGAGGGAGTT+GGG - chr6_4:43782862-43782881 Msa0988920:CDS 50.0%
AAGCCTAGATTACCCGCTGT+TGG - chr6_4:43783176-43783195 Msa0988920:CDS 50.0%
!! TTGGAGAGAGGTGGTGGGAT+TGG + chr6_4:43781457-43781476 None:intergenic 55.0%
TAGTAGTTGGGATGGGGGCT+TGG + chr6_4:43781476-43781495 None:intergenic 55.0%
GGGAATAGTGGTGGTCGAAG+GGG + chr6_4:43781553-43781572 None:intergenic 55.0%
CGGGAATAGTGGTGGTCGAA+GGG + chr6_4:43781554-43781573 None:intergenic 55.0%
TCGGGAATAGTGGTGGTCGA+AGG + chr6_4:43781555-43781574 None:intergenic 55.0%
GTGCAAGGAGTAGTGAGGGT+GGG + chr6_4:43781759-43781778 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_4:43781763-43781782 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_4:43781764-43781783 None:intergenic 55.0%
!! AGGCGTTGGTAGTGGTCATG+GGG + chr6_4:43781797-43781816 None:intergenic 55.0%
!! GAAGGCGTTGGTAGTGGTCA+TGG + chr6_4:43781799-43781818 None:intergenic 55.0%
!! GTTAGCGAAGGCGTTGGTAG+TGG + chr6_4:43781805-43781824 None:intergenic 55.0%
AGGGCTAATAGGTCCAGTGG+TGG + chr6_4:43781853-43781872 None:intergenic 55.0%
GCTAGGGCTAATAGGTCCAG+TGG + chr6_4:43781856-43781875 None:intergenic 55.0%
! GTGGTGGTGCTAGGGCTAAT+AGG + chr6_4:43781864-43781883 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGTGCT+AGG + chr6_4:43781873-43781892 None:intergenic 55.0%
!! TTGGAGAGAGGTGGTGGGAT+TGG + chr6_4:43781457-43781476 None:intergenic 55.0%
TAGTAGTTGGGATGGGGGCT+TGG + chr6_4:43781476-43781495 None:intergenic 55.0%
GGGAATAGTGGTGGTCGAAG+GGG + chr6_4:43781553-43781572 None:intergenic 55.0%
CGGGAATAGTGGTGGTCGAA+GGG + chr6_4:43781554-43781573 None:intergenic 55.0%
TCGGGAATAGTGGTGGTCGA+AGG + chr6_4:43781555-43781574 None:intergenic 55.0%
GTGCAAGGAGTAGTGAGGGT+GGG + chr6_4:43781759-43781778 None:intergenic 55.0%
TGGGGTGCAAGGAGTAGTGA+GGG + chr6_4:43781763-43781782 None:intergenic 55.0%
TTGGGGTGCAAGGAGTAGTG+AGG + chr6_4:43781764-43781783 None:intergenic 55.0%
!! AGGCGTTGGTAGTGGTCATG+GGG + chr6_4:43781797-43781816 None:intergenic 55.0%
!! GAAGGCGTTGGTAGTGGTCA+TGG + chr6_4:43781799-43781818 None:intergenic 55.0%
!! GTTAGCGAAGGCGTTGGTAG+TGG + chr6_4:43781805-43781824 None:intergenic 55.0%
AGGGCTAATAGGTCCAGTGG+TGG + chr6_4:43781853-43781872 None:intergenic 55.0%
GCTAGGGCTAATAGGTCCAG+TGG + chr6_4:43781856-43781875 None:intergenic 55.0%
! GTGGTGGTGCTAGGGCTAAT+AGG + chr6_4:43781864-43781883 None:intergenic 55.0%
!! GTCAAGTTGGTGGTGGTGCT+AGG + chr6_4:43781873-43781892 None:intergenic 55.0%
! GAGGTGGTGGTGACAGTGGT+TGG + chr6_4:43781291-43781310 None:intergenic 60.0%
GGTGCAAGGAGTAGTGAGGG+TGG + chr6_4:43781760-43781779 None:intergenic 60.0%
!! GGCGTTGGTAGTGGTCATGG+GGG + chr6_4:43781796-43781815 None:intergenic 60.0%
! TGTGGGGTTAGCGAAGGCGT+TGG + chr6_4:43781811-43781830 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_4:43782339-43782358 Msa0988920:intron 60.0%
! GAGGTGGTGGTGACAGTGGT+TGG + chr6_4:43781291-43781310 None:intergenic 60.0%
GGTGCAAGGAGTAGTGAGGG+TGG + chr6_4:43781760-43781779 None:intergenic 60.0%
!! GGCGTTGGTAGTGGTCATGG+GGG + chr6_4:43781796-43781815 None:intergenic 60.0%
! TGTGGGGTTAGCGAAGGCGT+TGG + chr6_4:43781811-43781830 None:intergenic 60.0%
! TTAGCGGGTCCCCACATCCA+AGG - chr6_4:43782339-43782358 Msa0988920:intron 60.0%
! GGTGGAGGTGGTGGTGACAG+TGG + chr6_4:43781295-43781314 None:intergenic 65.0%
GGGGCTTGGAGAGAGGTGGT+GGG + chr6_4:43781462-43781481 None:intergenic 65.0%
GATGGGGGCTTGGAGAGAGG+TGG + chr6_4:43781466-43781485 None:intergenic 65.0%
TGGGATGGGGGCTTGGAGAG+AGG + chr6_4:43781469-43781488 None:intergenic 65.0%
! GGTGGAGGTGGTGGTGACAG+TGG + chr6_4:43781295-43781314 None:intergenic 65.0%
GGGGCTTGGAGAGAGGTGGT+GGG + chr6_4:43781462-43781481 None:intergenic 65.0%
GATGGGGGCTTGGAGAGAGG+TGG + chr6_4:43781466-43781485 None:intergenic 65.0%
TGGGATGGGGGCTTGGAGAG+AGG + chr6_4:43781469-43781488 None:intergenic 65.0%
GGGGGCTTGGAGAGAGGTGG+TGG + chr6_4:43781463-43781482 None:intergenic 70.0%
GGGGGCTTGGAGAGAGGTGG+TGG + chr6_4:43781463-43781482 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 43781183 43783604 43781183 ID=Msa0988920;Name=Msa0988920
chr6_4 mRNA 43781183 43783604 43781183 ID=Msa0988920-mRNA-1;Parent=Msa0988920;Name=Msa0988920-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|3|0|557
chr6_4 exon 43782646 43783604 43782646 ID=Msa0988920-mRNA-1:exon:10092;Parent=Msa0988920-mRNA-1
chr6_4 exon 43782427 43782543 43782427 ID=Msa0988920-mRNA-1:exon:10091;Parent=Msa0988920-mRNA-1
chr6_4 exon 43781183 43781780 43781183 ID=Msa0988920-mRNA-1:exon:10090;Parent=Msa0988920-mRNA-1
chr6_4 CDS 43782646 43783604 43782646 ID=Msa0988920-mRNA-1:cds;Parent=Msa0988920-mRNA-1
chr6_4 CDS 43782427 43782543 43782427 ID=Msa0988920-mRNA-1:cds;Parent=Msa0988920-mRNA-1
chr6_4 CDS 43781183 43781780 43781183 ID=Msa0988920-mRNA-1:cds;Parent=Msa0988920-mRNA-1
Gene Sequence

>Msa0988920

ATGGACATTGACGATTGGGATCTCTTTTCCTTTGTCAATAGCAACAAGGCTACAACCTTTACCAACCCCGCCTCTTTTATTGAAACCCCATCTCCATCTCAAACACCAACCACTGTCACCACCACCTCCACCACCAATAATGTCATATCTCCTCAAAATATCCCACCATTGTACTTTGATGGTTTTAGCCTTGCCCAAGACAATAACCCTGTTCCTTTTTCCCCACTTAAACAAATTGATTTCATAGATCTAGACAAATTGAAAATCAATTCCAATCCCACCACCTCTCTCCAAGCCCCCATCCCAACTACTACCACTATCCCAACCCTCATTACAACCACTTCATCCCCAATCACTATTATGCAAACCCCTTCGACCACCACTATTCCCGACCACATAACATTTGGTACAATCACTAACACTAGTGCTCATGGTTTCAATAAAAAACCCACCTTTTTTGATTGTCCAACACTTATCGAACAACAAGGAATGCAATCAAATGGGCACGAGCTAAATAAATTTATATTCAACAAAAATCCCGTTAACCCCATGCCTACCAATAATTTCAATACTCCCACCCTCACTACTCCTTGCACCCCAACTAGACTTACCCCCATGACCACTACCAACGCCTTCGCTAACCCCACAACTACTTTTTTCACTCCGACCACCACTGGACCTATTAGCCCTAGCACCACCACCAACTTGACTAACATTATCACTAGTGTTCATGGAACCAGTCAATATCCTACCATTTCAGATTATGCAATACTCATCAAACAACAACAAATTCAACCAAACAATAACAGTCAAGTGTTTGATCATGCATACAACTATTCATTTGTTCCACAACAACCCCCAAGAAAGCTCAATCAATCACAAATTCAATTACCCAACACCAGATCTAGGATTTTACCTAATTCAGATTCACAAAAAGCAAAACATAATTCAAGAATCAGAAAAATTAACAACAAGGTAACTTTGGAATGCCATGTGAGAACAAGCAAGCTTTCAGAAGATTGGTGGTCGTGGACAAAATATGGACAGAAAAACATTAGCGGGTCCCCACATCCAAGGAGCTACTTTAAATGTAGCAGTTCTAAAGATTGTTCAGCAAAAAAACTAGTACAAAAAAGTGACACCGAAGAGGACACTTTTGTTGTGACGTTTGTTGGAGCACACAACCATGAAAAACCAGCAGGTAAATGGAACTCTATTGGTGGGACCTCCCAGAACAAGTCATCAAAGCCTAGATTACCCGCTGTTGGAAATTTCAGGTCGTCACCAAACATTTCAAAGCCGGGTTCTCAAAATGTGACGATGATGCATGTCGATCATCCAAAGAGCAGGAATATTCAAGTTCTCCCTAGTCAATCAGAAATCCCTTCAGAAACTGAACTTATAGAGACCCATTTACCCGCTGCTAGAGAAATTGAATCATCTCCTAATGTTGAAAACTTGTTTTCATATGATGTGACGATGCTACAATCTGATGAGCCAATGAGTAGCAATGCTCATGATTACTCCGGTGAATCACAAATCCTTCCTTCAGAAAACAAACTTATTGGTAACTCTGATGACGATGAAGAAATTATGATACCAAGCATGACTGATATGTCAGAGGATTTCTTATTGGATTTTGACCACCTAAATGATGGTTTTCTATTTCCTTAG
Protein sequence

>Msa0988920

MDIDDWDLFSFVNSNKATTFTNPASFIETPSPSQTPTTVTTTSTTNNVISPQNIPPLYFDGFSLAQDNNPVPFSPLKQIDFIDLDKLKINSNPTTSLQAPIPTTTTIPTLITTTSSPITIMQTPSTTTIPDHITFGTITNTSAHGFNKKPTFFDCPTLIEQQGMQSNGHELNKFIFNKNPVNPMPTNNFNTPTLTTPCTPTRLTPMTTTNAFANPTTTFFTPTTTGPISPSTTTNLTNIITSVHGTSQYPTISDYAILIKQQQIQPNNNSQVFDHAYNYSFVPQQPPRKLNQSQIQLPNTRSRILPNSDSQKAKHNSRIRKINNKVTLECHVRTSKLSEDWWSWTKYGQKNISGSPHPRSYFKCSSSKDCSAKKLVQKSDTEEDTFVVTFVGAHNHEKPAGKWNSIGGTSQNKSSKPRLPAVGNFRSSPNISKPGSQNVTMMHVDHPKSRNIQVLPSQSEIPSETELIETHLPAAREIESSPNVENLFSYDVTMLQSDEPMSSNAHDYSGESQILPSENKLIGNSDDDEEIMIPSMTDMSEDFLLDFDHLNDGFLFP*