Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0991720 | KEH17360.1 | 84.441 | 707 | 67 | 6 | 71 | 771 | 22 | 691 | 0.0 | 1179 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0991720 | sp|Q9SSE9|JMJ25_ARATH | 49.713 | 523 | 213 | 9 | 276 | 790 | 415 | 895 | 4.04e-155 | 482 |
Msa0991720 | sp|Q9SSE9|JMJ25_ARATH | 42.105 | 133 | 71 | 2 | 122 | 249 | 209 | 340 | 1.37e-23 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0991720 | A0A072TV18 | 84.441 | 707 | 67 | 6 | 71 | 771 | 22 | 691 | 0.0 | 1179 |
Gene ID | Type | Classification |
---|---|---|
Msa0991720 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0991720 | MtrunA17_Chr6g0472441 | 81.481 | 729 | 78 | 8 | 71 | 782 | 22 | 710 | 0.0 | 1162 |
Msa0991720 | MtrunA17_Chr5g0420361 | 69.059 | 808 | 152 | 10 | 31 | 770 | 2 | 779 | 0.0 | 1048 |
Msa0991720 | MtrunA17_Chr1g0183311 | 65.444 | 709 | 174 | 10 | 123 | 790 | 205 | 883 | 0.0 | 910 |
Msa0991720 | MtrunA17_Chr1g0211711 | 65.755 | 695 | 159 | 11 | 126 | 790 | 407 | 1052 | 0.0 | 895 |
Msa0991720 | MtrunA17_Chr5g0426961 | 62.763 | 666 | 205 | 11 | 130 | 790 | 209 | 836 | 0.0 | 795 |
Msa0991720 | MtrunA17_Chr1g0211661 | 60.855 | 608 | 203 | 9 | 126 | 729 | 289 | 865 | 0.0 | 714 |
Msa0991720 | MtrunA17_Chr1g0211691 | 59.253 | 589 | 156 | 10 | 125 | 677 | 405 | 945 | 0.0 | 662 |
Msa0991720 | MtrunA17_Chr5g0448301 | 47.588 | 622 | 263 | 14 | 83 | 699 | 68 | 631 | 3.31e-174 | 516 |
Msa0991720 | MtrunA17_Chr2g0289121 | 44.706 | 680 | 291 | 19 | 122 | 786 | 210 | 819 | 6.14e-165 | 499 |
Msa0991720 | MtrunA17_Chr4g0075261 | 41.261 | 698 | 299 | 20 | 132 | 786 | 235 | 864 | 6.56e-154 | 471 |
Msa0991720 | MtrunA17_Chr7g0275771 | 39.538 | 736 | 323 | 21 | 144 | 786 | 218 | 924 | 6.45e-149 | 461 |
Msa0991720 | MtrunA17_Chr2g0289031 | 51.716 | 408 | 170 | 9 | 386 | 786 | 6 | 393 | 1.17e-122 | 374 |
Msa0991720 | MtrunA17_Chr1g0192011 | 32.606 | 687 | 359 | 14 | 139 | 787 | 341 | 961 | 2.75e-107 | 352 |
Msa0991720 | MtrunA17_Chr2g0281051 | 31.960 | 704 | 388 | 19 | 144 | 790 | 289 | 958 | 6.60e-94 | 315 |
Msa0991720 | MtrunA17_Chr1g0147021 | 41.593 | 452 | 205 | 12 | 136 | 579 | 940 | 1340 | 3.99e-91 | 315 |
Msa0991720 | MtrunA17_Chr1g0147021 | 58.378 | 185 | 72 | 2 | 618 | 802 | 1528 | 1707 | 8.42e-59 | 218 |
Msa0991720 | MtrunA17_Chr8g0364421 | 44.649 | 271 | 97 | 6 | 178 | 448 | 10 | 227 | 4.11e-61 | 206 |
Msa0991720 | MtrunA17_Chr1g0211701 | 80.000 | 115 | 23 | 0 | 675 | 789 | 4 | 118 | 2.56e-60 | 201 |
Msa0991720 | MtrunA17_Chr2g0289091 | 72.072 | 111 | 31 | 0 | 641 | 751 | 310 | 420 | 7.83e-50 | 181 |
Msa0991720 | MtrunA17_Chr2g0289091 | 55.285 | 123 | 51 | 2 | 462 | 580 | 20 | 142 | 2.38e-33 | 133 |
Msa0991720 | MtrunA17_Chr8g0361381 | 49.474 | 190 | 85 | 6 | 384 | 569 | 26 | 208 | 3.38e-47 | 167 |
Msa0991720 | MtrunA17_Chr4g0048531 | 39.453 | 256 | 132 | 6 | 534 | 787 | 1043 | 1277 | 4.12e-44 | 172 |
Msa0991720 | MtrunA17_Chr4g0048531 | 34.405 | 311 | 174 | 10 | 286 | 591 | 727 | 1012 | 1.27e-41 | 165 |
Msa0991720 | MtrunA17_Chr4g0048531 | 41.250 | 80 | 46 | 1 | 144 | 223 | 347 | 425 | 2.11e-12 | 71.2 |
Msa0991720 | MtrunA17_Chr8g0361391 | 75.000 | 88 | 21 | 1 | 642 | 729 | 51 | 137 | 1.37e-41 | 149 |
Msa0991720 | MtrunA17_Chr8g0340381 | 51.829 | 164 | 54 | 5 | 486 | 635 | 36 | 188 | 1.65e-38 | 141 |
Msa0991720 | MtrunA17_Chr7g0231061 | 50.000 | 144 | 68 | 2 | 452 | 591 | 12 | 155 | 2.92e-38 | 141 |
Msa0991720 | MtrunA17_Chr2g0289041 | 39.326 | 178 | 96 | 7 | 122 | 295 | 35 | 204 | 1.38e-25 | 105 |
Msa0991720 | MtrunA17_Chr1g0211671 | 72.581 | 62 | 17 | 0 | 728 | 789 | 15 | 76 | 9.02e-25 | 100 |
Msa0991720 | MtrunA17_Chr2g0289101 | 36.434 | 129 | 75 | 4 | 195 | 322 | 8 | 130 | 4.62e-17 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0991720 | AT1G11950.1 | 45.077 | 650 | 298 | 15 | 143 | 786 | 272 | 868 | 7.09e-177 | 531 |
Msa0991720 | AT1G11950.3 | 45.077 | 650 | 298 | 15 | 143 | 786 | 272 | 868 | 7.09e-177 | 531 |
Msa0991720 | AT1G62310.1 | 46.154 | 637 | 288 | 16 | 143 | 770 | 288 | 878 | 3.15e-175 | 528 |
Msa0991720 | AT4G00990.1 | 40.990 | 727 | 318 | 22 | 128 | 785 | 144 | 828 | 3.33e-157 | 479 |
Msa0991720 | AT3G07610.1 | 49.713 | 523 | 213 | 9 | 276 | 790 | 415 | 895 | 4.10e-156 | 482 |
Msa0991720 | AT3G07610.1 | 42.105 | 133 | 71 | 2 | 122 | 249 | 209 | 340 | 1.40e-24 | 110 |
Msa0991720 | AT3G07610.3 | 48.593 | 533 | 226 | 11 | 276 | 790 | 415 | 917 | 1.63e-148 | 463 |
Msa0991720 | AT3G07610.3 | 42.105 | 133 | 71 | 2 | 122 | 249 | 209 | 340 | 1.35e-24 | 110 |
Msa0991720 | AT1G11950.2 | 42.367 | 583 | 277 | 15 | 143 | 719 | 272 | 801 | 8.31e-140 | 433 |
Msa0991720 | AT4G00990.3 | 38.996 | 677 | 302 | 19 | 128 | 735 | 144 | 778 | 2.69e-133 | 416 |
Msa0991720 | AT4G00990.2 | 39.312 | 669 | 295 | 19 | 128 | 727 | 144 | 770 | 3.24e-132 | 412 |
Msa0991720 | AT1G09060.2 | 30.535 | 691 | 358 | 23 | 139 | 787 | 281 | 891 | 8.62e-83 | 285 |
Msa0991720 | AT1G09060.1 | 30.535 | 691 | 358 | 23 | 139 | 787 | 281 | 891 | 8.62e-83 | 285 |
Msa0991720 | AT1G09060.4 | 30.535 | 691 | 358 | 23 | 139 | 787 | 295 | 905 | 1.35e-82 | 284 |
Msa0991720 | AT1G09060.3 | 30.535 | 691 | 358 | 23 | 139 | 787 | 295 | 905 | 1.35e-82 | 284 |
Msa0991720 | AT3G07610.2 | 47.039 | 304 | 129 | 8 | 276 | 575 | 415 | 690 | 2.35e-71 | 249 |
Msa0991720 | AT3G07610.2 | 42.105 | 133 | 71 | 2 | 122 | 249 | 209 | 340 | 3.34e-24 | 109 |
Msa0991720 | AT4G21430.1 | 33.710 | 442 | 255 | 10 | 378 | 790 | 484 | 916 | 7.41e-70 | 248 |
Find 162 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATCTAATTCTCTTAAATA+TGG | 0.219846 | 6_4:-57397050 | None:intergenic |
ATCGACTTTACCTGCTTTAT+AGG | 0.238576 | 6_4:-57399941 | None:intergenic |
TTCAGATATTCATTCAATTT+AGG | 0.248120 | 6_4:-57399881 | None:intergenic |
TTGCCTACCATTCAATTTAC+AGG | 0.248262 | 6_4:+57401954 | Msa0991720:CDS |
TTACATTCATTATTAGCTTT+TGG | 0.259405 | 6_4:-57397959 | None:intergenic |
ATATCATCTTCCTTCTTAAC+AGG | 0.276535 | 6_4:-57398121 | None:intergenic |
AGTACGTTGCTGACAATTAC+AGG | 0.277570 | 6_4:-57398331 | None:intergenic |
AGCATGAGATTCAATTTCTA+TGG | 0.285636 | 6_4:-57397864 | None:intergenic |
CTCTTTATCTTCAAGTTTAA+CGG | 0.287927 | 6_4:-57398065 | None:intergenic |
CTTCGTCGTGGGGAGCTTCT+AGG | 0.301830 | 6_4:+57397761 | Msa0991720:CDS |
CATCAAGAAAATAGTTTAGA+TGG | 0.330265 | 6_4:+57399824 | Msa0991720:CDS |
AATGTGAACGATTTCTTTAC+CGG | 0.331440 | 6_4:+57398623 | Msa0991720:CDS |
AGGCAATTGATTGCTTAAAT+TGG | 0.335529 | 6_4:+57398452 | Msa0991720:CDS |
ATGATTGTTAGTGAGATAAA+AGG | 0.342261 | 6_4:-57400128 | None:intergenic |
CTCAATGTCATGATCATTGT+TGG | 0.344575 | 6_4:-57396997 | None:intergenic |
AGTCCCATCTGAACATTATC+AGG | 0.349044 | 6_4:-57398824 | None:intergenic |
ACCAACTCAGAGATGCAATT+TGG | 0.349840 | 6_4:-57398016 | None:intergenic |
TCTGTGGAACAGTGATTTAC+TGG | 0.354305 | 6_4:-57400984 | None:intergenic |
AGTGATTTACTGGAAGTTTA+CGG | 0.362091 | 6_4:-57400974 | None:intergenic |
ATTCATGAATGGTCAAAATC+TGG | 0.368446 | 6_4:+57397902 | Msa0991720:CDS |
GTTTCTTCTTCTTTGTCGCT+AGG | 0.377288 | 6_4:-57396443 | None:intergenic |
AAGAGGCTTAAGGAGGAGTA+TGG | 0.378678 | 6_4:+57400154 | Msa0991720:CDS |
GATGGTAGAGATTCAGTATC+TGG | 0.380558 | 6_4:+57396405 | Msa0991720:CDS |
CCTGCCGTTTAAAGAATATA+CGG | 0.386381 | 6_4:+57398763 | Msa0991720:CDS |
AGAAGCATTTCAGAGAGTTC+AGG | 0.389778 | 6_4:+57399903 | Msa0991720:CDS |
TTCTTTACCGGGTACACAAA+TGG | 0.390751 | 6_4:+57398635 | Msa0991720:CDS |
TACTAATCACAATTCAGTTT+CGG | 0.391063 | 6_4:+57398423 | Msa0991720:CDS |
TGCTCATCTGAAGCAGTTAC+GGG | 0.392512 | 6_4:-57399713 | None:intergenic |
TTCAATGGCACTGGAGAAAA+GGG | 0.397011 | 6_4:+57398305 | Msa0991720:CDS |
AAAACTTTGTATACTGTCCT+AGG | 0.399000 | 6_4:+57398242 | Msa0991720:CDS |
TTTCAATGGCACTGGAGAAA+AGG | 0.401004 | 6_4:+57398304 | Msa0991720:CDS |
TTGTGCCAAAGAGAAGAAAA+AGG | 0.402894 | 6_4:+57396650 | Msa0991720:CDS |
TCTGTGGTAGTCAAATATTA+AGG | 0.404685 | 6_4:-57397690 | None:intergenic |
TTAGAGAATGATGAAGAAAC+TGG | 0.411838 | 6_4:+57396501 | Msa0991720:CDS |
TTGCTCATCTGAAGCAGTTA+CGG | 0.413932 | 6_4:-57399714 | None:intergenic |
ATCTCTACCATCCAGCTTCA+AGG | 0.416012 | 6_4:-57396394 | None:intergenic |
ACACAAATGGTCGCAAAGAT+AGG | 0.417742 | 6_4:+57398648 | Msa0991720:CDS |
CTGTTCCACAGAGGACAAAT+TGG | 0.419919 | 6_4:+57400995 | Msa0991720:CDS |
TGCAGATCCAGTTGAGTTTG+AGG | 0.420901 | 6_4:+57397787 | Msa0991720:CDS |
AGAGAAGAAAACGGAAAAGA+AGG | 0.423754 | 6_4:+57396696 | Msa0991720:CDS |
TTTGACCATTCATGAATCTC+AGG | 0.426830 | 6_4:-57397896 | None:intergenic |
AGAGAGTAATGCAGAGAAGA+AGG | 0.427096 | 6_4:+57396473 | Msa0991720:CDS |
TTGATAACCTCAAACTCAAC+TGG | 0.427926 | 6_4:-57397794 | None:intergenic |
AGGAAAATCGAGGTAGGAAA+AGG | 0.431979 | 6_4:+57396604 | Msa0991720:CDS |
GTCCATGGCTTCCTTGAAGC+TGG | 0.437766 | 6_4:+57396383 | None:intergenic |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_4:-57398145 | None:intergenic |
ACCACCTTCCCTGGATCATT+CGG | 0.438256 | 6_4:-57398199 | None:intergenic |
CCGTATATTCTTTAAACGGC+AGG | 0.445386 | 6_4:-57398763 | None:intergenic |
CAATCATAAGAAGAGGCTTA+AGG | 0.445426 | 6_4:+57400144 | Msa0991720:CDS |
GGATCCGTATATTCTTTAAA+CGG | 0.445427 | 6_4:-57398767 | None:intergenic |
GAAACTTGATTGCATGCATA+AGG | 0.446384 | 6_4:+57396740 | Msa0991720:CDS |
AAAGAGGAGACTCTTGATAA+TGG | 0.452433 | 6_4:+57398082 | Msa0991720:CDS |
GCTAATAATGAATGTAATCA+TGG | 0.455983 | 6_4:+57397965 | Msa0991720:CDS |
GACAAAATCAAGTGCAACCT+TGG | 0.456526 | 6_4:-57400907 | None:intergenic |
GGTAGTCAAATATTAAGGTT+TGG | 0.456642 | 6_4:-57397685 | None:intergenic |
CGTCAGACCTGTAAATTGAA+TGG | 0.462027 | 6_4:-57401961 | None:intergenic |
AAGGTATTTCAGCATATACT+TGG | 0.472386 | 6_4:-57397024 | None:intergenic |
AAAGACCAAAGAGAAGAAAA+CGG | 0.474723 | 6_4:+57396687 | Msa0991720:CDS |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_4:+57398136 | Msa0991720:CDS |
GATGATATACCGAATGATCC+AGG | 0.476958 | 6_4:+57398190 | Msa0991720:CDS |
CACGAATTCGAGTTCCACTT+TGG | 0.478059 | 6_4:-57399573 | None:intergenic |
GTACTTGAATCAAGCACATC+TGG | 0.479758 | 6_4:+57398349 | Msa0991720:CDS |
GAGATAGAAGCCAAGATTCA+AGG | 0.481462 | 6_4:+57397092 | Msa0991720:CDS |
CAAGCACATCTGGTATAAGC+TGG | 0.481486 | 6_4:+57398359 | Msa0991720:CDS |
GCTTGATGCGGTAGAAAAGT+TGG | 0.486404 | 6_4:+57401617 | Msa0991720:CDS |
ACCAAATTGCATCTCTGAGT+TGG | 0.491046 | 6_4:+57398015 | Msa0991720:CDS |
GACTTGTAGGAATTGAGCCT+TGG | 0.491834 | 6_4:+57400264 | Msa0991720:intron |
CGGAGCAGCAGCGGAGACAA+AGG | 0.495455 | 6_4:-57397736 | None:intergenic |
TTTCTTCTTCTTTGTCGCTA+GGG | 0.496852 | 6_4:-57396442 | None:intergenic |
AAGCTCCCCACGACGAAGCT+CGG | 0.497059 | 6_4:-57397756 | None:intergenic |
CTAAAGATCAGTGTGCATAC+TGG | 0.497463 | 6_4:+57397564 | Msa0991720:CDS |
TGATTGCTTAAATTGGTGCC+AGG | 0.502959 | 6_4:+57398459 | Msa0991720:CDS |
GGAACAAGTAGTGAAGAAGA+AGG | 0.503069 | 6_4:+57396584 | Msa0991720:CDS |
GCTGCTCCGAGCTTCGTCGT+GGG | 0.506497 | 6_4:+57397750 | Msa0991720:CDS |
AAATGAAAGTGCACTAGTCA+TGG | 0.509200 | 6_4:+57399757 | Msa0991720:CDS |
GCAAAATAGTGTTCGAGTCA+TGG | 0.509831 | 6_4:+57399733 | Msa0991720:CDS |
TCAAGAACAAATTGCTGAGA+AGG | 0.511113 | 6_4:+57397070 | Msa0991720:CDS |
CGTTAAACTTGAAGATAAAG+AGG | 0.512697 | 6_4:+57398066 | Msa0991720:CDS |
CATGCAGATAATCTTGCCCT+TGG | 0.516962 | 6_4:-57397817 | None:intergenic |
ATTCTCTTAAATATGGAAGA+AGG | 0.523817 | 6_4:-57397043 | None:intergenic |
TTCATGAATGGTCAAAATCT+GGG | 0.525657 | 6_4:+57397903 | Msa0991720:CDS |
GGGTGGCATGCCGGCAGTGA+TGG | 0.529308 | 6_4:+57397923 | Msa0991720:CDS |
GACGAAGCTCGGAGCAGCAG+CGG | 0.530073 | 6_4:-57397745 | None:intergenic |
AAAGAAGGAGAAGAAAATGC+TGG | 0.532359 | 6_4:+57396711 | Msa0991720:CDS |
TCAAAATCTGGGTGGCATGC+CGG | 0.534124 | 6_4:+57397914 | Msa0991720:CDS |
ACTTGATGAGGACAACCAGC+TGG | 0.534166 | 6_4:-57400323 | None:intergenic |
TTTGTCTCTCCTGAAAATGT+TGG | 0.534278 | 6_4:+57400924 | Msa0991720:CDS |
ATGGCTTCCTTGAAGCTGGA+TGG | 0.538417 | 6_4:+57396387 | Msa0991720:CDS |
AGGTTAAGAGCAGCTTTGAA+AGG | 0.541086 | 6_4:-57398788 | None:intergenic |
CTAGTCATGGAAAATGAAAG+TGG | 0.543959 | 6_4:+57399770 | Msa0991720:CDS |
CAATTCAGTTTCGGATGTGA+AGG | 0.546118 | 6_4:+57398432 | Msa0991720:CDS |
TGAGATAAAAGGTCTGATCA+TGG | 0.546504 | 6_4:-57400117 | None:intergenic |
CTGCTCCGAGCTTCGTCGTG+GGG | 0.547255 | 6_4:+57397751 | Msa0991720:CDS |
AACTCAGAGATGCAATTTGG+TGG | 0.550293 | 6_4:-57398013 | None:intergenic |
ATGGAGAGACCAATGTTGAC+AGG | 0.554177 | 6_4:+57399672 | Msa0991720:CDS |
TAGTTTAGATGGTGCTCTGT+GGG | 0.555435 | 6_4:+57399835 | Msa0991720:CDS |
ATAAAAGGTCTGATCATGGA+TGG | 0.557609 | 6_4:-57400113 | None:intergenic |
AATGATGAAGAAACTGGTAA+AGG | 0.559773 | 6_4:+57396507 | Msa0991720:CDS |
TTTGCGACCATTTGTGTACC+CGG | 0.561602 | 6_4:-57398642 | None:intergenic |
CGTATATTCTTTAAACGGCA+GGG | 0.561613 | 6_4:-57398762 | None:intergenic |
GTCGCAAAGATAGGCTCGAT+TGG | 0.561745 | 6_4:+57398657 | Msa0991720:CDS |
TTCAGATTTCTGACTTGATG+AGG | 0.562161 | 6_4:-57400335 | None:intergenic |
GCGGATGCTACCATCACTGC+CGG | 0.564083 | 6_4:-57397933 | None:intergenic |
CTATTGCTCTCCTATAAAGC+AGG | 0.564329 | 6_4:+57399931 | Msa0991720:CDS |
ATCCAGCTTCAAGGAAGCCA+TGG | 0.565808 | 6_4:-57396385 | None:intergenic |
AGAAGAAGGAAAATCGAGGT+AGG | 0.566155 | 6_4:+57396598 | Msa0991720:CDS |
TGCTGCTCCGAGCTTCGTCG+TGG | 0.568280 | 6_4:+57397749 | Msa0991720:CDS |
TCTTTCAATTTCAATAGTTG+AGG | 0.569152 | 6_4:-57398680 | None:intergenic |
TCATCAAGTCAGAAATCTGA+AGG | 0.570021 | 6_4:+57400337 | Msa0991720:CDS |
TCACTAACAATCATAAGAAG+AGG | 0.571805 | 6_4:+57400137 | Msa0991720:CDS |
TATCAGGCAGCTTCAAAGCA+AGG | 0.573948 | 6_4:-57398808 | None:intergenic |
AGACCTGTAAATTGAATGGT+AGG | 0.578203 | 6_4:-57401957 | None:intergenic |
CTGCCTGATAATGTTCAGAT+GGG | 0.580666 | 6_4:+57398821 | Msa0991720:CDS |
CTCAGCCTGAGATTCATGAA+TGG | 0.580958 | 6_4:+57397891 | Msa0991720:CDS |
GCTGCCTGATAATGTTCAGA+TGG | 0.581979 | 6_4:+57398820 | Msa0991720:CDS |
ATTATCAAGCCTGTCAACAT+TGG | 0.582130 | 6_4:-57399681 | None:intergenic |
AGTTTGAGGTTATCAACCAA+GGG | 0.590691 | 6_4:+57397801 | Msa0991720:CDS |
AAGCACATCTGGTATAAGCT+GGG | 0.598444 | 6_4:+57398360 | Msa0991720:CDS |
GAAGCAGTTACGGGAGAAGA+CGG | 0.599610 | 6_4:-57399704 | None:intergenic |
AAGTGGATCATGTGATATGA+AGG | 0.602990 | 6_4:+57399787 | Msa0991720:CDS |
TACCTCCAATTTGTCCTCTG+TGG | 0.606074 | 6_4:-57401000 | None:intergenic |
TAAAAGGTCTGATCATGGAT+GGG | 0.606358 | 6_4:-57400112 | None:intergenic |
GGTCAGTGATTGCAAACTTG+AGG | 0.606819 | 6_4:+57401649 | Msa0991720:CDS |
AGATCTGCAAAATCATGAGA+AGG | 0.607799 | 6_4:+57398270 | Msa0991720:CDS |
CGGCAGGGATGATATGAGCT+CGG | 0.608155 | 6_4:-57398747 | None:intergenic |
CAAGGGCAAGATTATCTGCA+TGG | 0.609642 | 6_4:+57397818 | Msa0991720:CDS |
ATGTGAACGATTTCTTTACC+GGG | 0.609890 | 6_4:+57398624 | Msa0991720:CDS |
TTCCACAGAGGACAAATTGG+AGG | 0.610429 | 6_4:+57400998 | Msa0991720:CDS |
GCTGGGAACCGCTTGTCATG+TGG | 0.613386 | 6_4:+57398377 | Msa0991720:CDS |
AGCTTCTGAACAAAACTCCA+AGG | 0.613881 | 6_4:-57400281 | None:intergenic |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_4:+57398144 | Msa0991720:CDS |
ACCGAATGATCCAGGGAAGG+TGG | 0.613959 | 6_4:+57398198 | Msa0991720:CDS |
ATCACAATGGAGCTTTGTCA+CGG | 0.621649 | 6_4:-57398897 | None:intergenic |
GAGTTTGAGGTTATCAACCA+AGG | 0.622153 | 6_4:+57397800 | Msa0991720:CDS |
TAGAAAAGTTGGAGAAAGCA+AGG | 0.626408 | 6_4:+57401628 | Msa0991720:CDS |
GTTGACTCATATTGCCAAAG+TGG | 0.626432 | 6_4:+57399559 | Msa0991720:CDS |
GTGAAGAAGAAGGAAAATCG+AGG | 0.626702 | 6_4:+57396594 | Msa0991720:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_4:+57398137 | Msa0991720:CDS |
ATGATATACCGAATGATCCA+GGG | 0.630601 | 6_4:+57398191 | Msa0991720:CDS |
TCATAAGAAGAGGCTTAAGG+AGG | 0.634907 | 6_4:+57400147 | Msa0991720:CDS |
GCGACAAAGAAGAAGAAACA+TGG | 0.635439 | 6_4:+57396447 | Msa0991720:CDS |
GAGTAATGCAGAGAAGAAGG+AGG | 0.638495 | 6_4:+57396476 | Msa0991720:CDS |
AAACTTTGTATACTGTCCTA+GGG | 0.638779 | 6_4:+57398243 | Msa0991720:CDS |
GATTGCAAACTTGAGGCGAA+AGG | 0.644413 | 6_4:+57401656 | Msa0991720:CDS |
ATGATATGAGCTCGGCACAA+TGG | 0.653122 | 6_4:-57398739 | None:intergenic |
CGTCGTGGGGAGCTTCTAGG+TGG | 0.653994 | 6_4:+57397764 | Msa0991720:CDS |
AATGCATGCCACATGACAAG+CGG | 0.654461 | 6_4:-57398385 | None:intergenic |
GATCCAATCTCATGGAACAT+CGG | 0.659821 | 6_4:-57401987 | None:intergenic |
ATAGTTTAGATGGTGCTCTG+TGG | 0.668094 | 6_4:+57399834 | Msa0991720:CDS |
TGAGTGCTTGCGTTATACAG+AGG | 0.668951 | 6_4:+57400947 | Msa0991720:CDS |
TGGATCATGTGATATGAAGG+TGG | 0.679236 | 6_4:+57399790 | Msa0991720:CDS |
TCAATGGCACTGGAGAAAAG+GGG | 0.683003 | 6_4:+57398306 | Msa0991720:CDS |
TTCATGAATCTCAGGCTGAG+CGG | 0.683492 | 6_4:-57397888 | None:intergenic |
ATGAGCTCGGCACAATGGTG+TGG | 0.685553 | 6_4:-57398734 | None:intergenic |
GGGCAAGATTATCTGCATGG+TGG | 0.704928 | 6_4:+57397821 | Msa0991720:CDS |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_4:+57398141 | Msa0991720:CDS |
TATACCGAATGATCCAGGGA+AGG | 0.716500 | 6_4:+57398195 | Msa0991720:CDS |
TGTGTTGCAGTCATGCACCA+AGG | 0.722509 | 6_4:+57400890 | Msa0991720:intron |
CATACATGCTATGCTTGATG+CGG | 0.726884 | 6_4:+57401605 | Msa0991720:CDS |
ATGAATGGTCAAAATCTGGG+TGG | 0.728185 | 6_4:+57397906 | Msa0991720:CDS |
CTACATCAGACATATCACAA+TGG | 0.728251 | 6_4:-57398910 | None:intergenic |
AGTAAATCACTGTTCCACAG+AGG | 0.760358 | 6_4:+57400986 | Msa0991720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTATCTTTAAATTATT+AGG | - | chr6_4:57399342-57399361 | None:intergenic | 10.0% |
!!! | TGATTTTCTTAAATTATTTG+TGG | + | chr6_4:57397314-57397333 | Msa0991720:intron | 15.0% |
!!! | GATTTTTTTTTCTTTTCAAA+TGG | - | chr6_4:57399224-57399243 | None:intergenic | 15.0% |
!! | ATGTTGAATTGTTAATAAAA+TGG | - | chr6_4:57400243-57400262 | None:intergenic | 15.0% |
!! | ATTTGTTCTATCTTAAATAA+AGG | + | chr6_4:57400381-57400400 | Msa0991720:intron | 15.0% |
!!! | TTTTTGCTTATAATAGTAAT+CGG | - | chr6_4:57401764-57401783 | None:intergenic | 15.0% |
!!! | TACTTTATTTTAGTTTCTTT+AGG | + | chr6_4:57401922-57401941 | Msa0991720:intron | 15.0% |
!! | TGTTATGCATGTTATTAATA+AGG | + | chr6_4:57396798-57396817 | Msa0991720:intron | 20.0% |
!! | TGATCTAATTCTCTTAAATA+TGG | - | chr6_4:57397053-57397072 | None:intergenic | 20.0% |
!!! | CATTTTTTTCTTCTTTCTTT+TGG | + | chr6_4:57397400-57397419 | Msa0991720:intron | 20.0% |
!! | GAAATACAAACTTAATCAAA+AGG | - | chr6_4:57397466-57397485 | None:intergenic | 20.0% |
!!! | TTACATTCATTATTAGCTTT+TGG | - | chr6_4:57397962-57397981 | None:intergenic | 20.0% |
!!! | ATTAAGAAATTTTACAAACC+TGG | - | chr6_4:57398480-57398499 | None:intergenic | 20.0% |
!!! | AAACTTTTCTCAAACAAATT+AGG | - | chr6_4:57398713-57398732 | None:intergenic | 20.0% |
!! | AAAAAATTAAGACATGTACT+TGG | - | chr6_4:57399060-57399079 | None:intergenic | 20.0% |
!!! | AAGTACATGTCTTAATTTTT+TGG | + | chr6_4:57399059-57399078 | Msa0991720:intron | 20.0% |
!!! | GATTGTTTTACATATTTTTG+TGG | + | chr6_4:57399177-57399196 | Msa0991720:intron | 20.0% |
!! | ATAAGTTGTATCATTAGATA+AGG | + | chr6_4:57399252-57399271 | Msa0991720:intron | 20.0% |
!!! | TCATTAGATAAGGTATTTTT+TGG | + | chr6_4:57399262-57399281 | Msa0991720:intron | 20.0% |
!!! | TGTTTTGTTTCTTTACAATT+TGG | + | chr6_4:57399520-57399539 | Msa0991720:intron | 20.0% |
!! | TTCAGATATTCATTCAATTT+AGG | - | chr6_4:57399884-57399903 | None:intergenic | 20.0% |
!!! | AGCTATTGATAACTAAAATA+TGG | + | chr6_4:57400024-57400043 | Msa0991720:intron | 20.0% |
!!! | ATTGATAACTAAAATATGGT+AGG | + | chr6_4:57400028-57400047 | Msa0991720:intron | 20.0% |
!!! | TTCTTGAATGACATATATTT+TGG | + | chr6_4:57400072-57400091 | Msa0991720:intron | 20.0% |
!!! | AAGAACTTTTAACAACTAAT+CGG | - | chr6_4:57400461-57400480 | None:intergenic | 20.0% |
!! | ATGAAATTTGACAAAGAATT+TGG | + | chr6_4:57400601-57400620 | Msa0991720:intron | 20.0% |
!! | GGTAAAATATGTTTAATTCA+AGG | - | chr6_4:57401275-57401294 | None:intergenic | 20.0% |
!! | TCAATTACTGAAAATTTGAT+GGG | + | chr6_4:57401348-57401367 | Msa0991720:intron | 20.0% |
!!! | TCTTTGAAAAAAGGTATAAT+TGG | + | chr6_4:57401420-57401439 | Msa0991720:intron | 20.0% |
! | TACAAAGAAAAAACTGAAGA+AGG | + | chr6_4:57396563-57396582 | Msa0991720:CDS | 25.0% |
! | CATAGTAATAACATCTTTGA+GGG | - | chr6_4:57396826-57396845 | None:intergenic | 25.0% |
! | TCATAGTAATAACATCTTTG+AGG | - | chr6_4:57396827-57396846 | None:intergenic | 25.0% |
! | ATTCTCTTAAATATGGAAGA+AGG | - | chr6_4:57397046-57397065 | None:intergenic | 25.0% |
! | TCTTAAATTATTTGTGGTGT+CGG | + | chr6_4:57397320-57397339 | Msa0991720:intron | 25.0% |
! | GCTAATAATGAATGTAATCA+TGG | + | chr6_4:57397965-57397984 | Msa0991720:CDS | 25.0% |
!! | CTCTTTATCTTCAAGTTTAA+CGG | - | chr6_4:57398068-57398087 | None:intergenic | 25.0% |
!!! | AGGATTTAAGACATTTTCAA+TGG | + | chr6_4:57398290-57398309 | Msa0991720:CDS | 25.0% |
! | TACTAATCACAATTCAGTTT+CGG | + | chr6_4:57398423-57398442 | Msa0991720:CDS | 25.0% |
! | TCTTTCAATTTCAATAGTTG+AGG | - | chr6_4:57398683-57398702 | None:intergenic | 25.0% |
!! | CTTACTACATATTTTGCTTA+TGG | + | chr6_4:57398845-57398864 | Msa0991720:CDS | 25.0% |
!! | ATAAATCTTTTGATGCTTAG+AGG | + | chr6_4:57398980-57398999 | Msa0991720:intron | 25.0% |
! | ACTTGGAACTTCATAAATAT+CGG | - | chr6_4:57399144-57399163 | None:intergenic | 25.0% |
!!! | TACATATTTTTGTGGTGTTT+TGG | + | chr6_4:57399185-57399204 | Msa0991720:intron | 25.0% |
! | ATGAGTTGTATCATTAGATA+AGG | + | chr6_4:57399373-57399392 | Msa0991720:intron | 25.0% |
!!! | TCATTAGATAAGGTACTTTT+TGG | + | chr6_4:57399383-57399402 | Msa0991720:intron | 25.0% |
!!! | TCTTTACAATTTGGCTTTTT+AGG | + | chr6_4:57399529-57399548 | Msa0991720:intron | 25.0% |
! | CATCAAGAAAATAGTTTAGA+TGG | + | chr6_4:57399824-57399843 | Msa0991720:CDS | 25.0% |
!!! | GACATATATTTTGGTAATGT+AGG | + | chr6_4:57400081-57400100 | Msa0991720:intron | 25.0% |
! | ATGATTGTTAGTGAGATAAA+AGG | - | chr6_4:57400131-57400150 | None:intergenic | 25.0% |
!! | ATAATTTTTCGTACGTTGTT+TGG | + | chr6_4:57400189-57400208 | Msa0991720:intron | 25.0% |
!!! | AAAGGTGTAAATTTTCCATA+AGG | + | chr6_4:57400399-57400418 | Msa0991720:intron | 25.0% |
! | AAGTGTATATGTTGAAGTTA+TGG | + | chr6_4:57400422-57400441 | Msa0991720:intron | 25.0% |
! | TGTACAAGTATACAACTATT+AGG | - | chr6_4:57400525-57400544 | None:intergenic | 25.0% |
! | GGAATGTTTAAATGAGAATA+TGG | - | chr6_4:57400551-57400570 | None:intergenic | 25.0% |
! | TCTCATTTAAACATTCCTAA+AGG | + | chr6_4:57400554-57400573 | Msa0991720:intron | 25.0% |
! | ATCTAAATGTCTGAATGATA+TGG | - | chr6_4:57400645-57400664 | None:intergenic | 25.0% |
!! | AGTTCTGATATCTTAGTATT+TGG | + | chr6_4:57400712-57400731 | Msa0991720:intron | 25.0% |
! | GTTCTGATATCTTAGTATTT+GGG | + | chr6_4:57400713-57400732 | Msa0991720:intron | 25.0% |
!!! | TTAATGTTTTAAGTGCATCT+TGG | + | chr6_4:57400770-57400789 | Msa0991720:intron | 25.0% |
! | ATATAGCAGTTTCAAAATCT+GGG | + | chr6_4:57401140-57401159 | Msa0991720:intron | 25.0% |
! | GTCAATTACTGAAAATTTGA+TGG | + | chr6_4:57401347-57401366 | Msa0991720:intron | 25.0% |
!! | TCGAATTTCTCTTTGAAAAA+AGG | + | chr6_4:57401411-57401430 | Msa0991720:intron | 25.0% |
! | AATCTGTTGAAATGAAATGA+TGG | - | chr6_4:57401506-57401525 | None:intergenic | 25.0% |
! | TCATTTCAACAGATTCTTAT+TGG | + | chr6_4:57401511-57401530 | Msa0991720:intron | 25.0% |
! | GATTGAATAACTAATGTATC+TGG | - | chr6_4:57401858-57401877 | None:intergenic | 25.0% |
TTAGAGAATGATGAAGAAAC+TGG | + | chr6_4:57396501-57396520 | Msa0991720:CDS | 30.0% | |
AATGATGAAGAAACTGGTAA+AGG | + | chr6_4:57396507-57396526 | Msa0991720:CDS | 30.0% | |
!!! | TTTGTACCACGTTTTTTTCT+TGG | - | chr6_4:57396549-57396568 | None:intergenic | 30.0% |
AAAGACCAAAGAGAAGAAAA+CGG | + | chr6_4:57396687-57396706 | Msa0991720:CDS | 30.0% | |
ATGTAGAACACAGAAAACAA+AGG | - | chr6_4:57396917-57396936 | None:intergenic | 30.0% | |
! | AAGGTATTTCAGCATATACT+TGG | - | chr6_4:57397027-57397046 | None:intergenic | 30.0% |
GGAAAAAATACCTTGAATCT+TGG | - | chr6_4:57397105-57397124 | None:intergenic | 30.0% | |
!!! | TTCAAGGTATTTTTTCCTCA+AGG | + | chr6_4:57397108-57397127 | Msa0991720:intron | 30.0% |
! | TTTCTCTGCCTATGTTTTAT+AGG | + | chr6_4:57397161-57397180 | Msa0991720:intron | 30.0% |
GGTAGTCAAATATTAAGGTT+TGG | - | chr6_4:57397688-57397707 | None:intergenic | 30.0% | |
TCTGTGGTAGTCAAATATTA+AGG | - | chr6_4:57397693-57397712 | None:intergenic | 30.0% | |
AGCATGAGATTCAATTTCTA+TGG | - | chr6_4:57397867-57397886 | None:intergenic | 30.0% | |
ATTCATGAATGGTCAAAATC+TGG | + | chr6_4:57397902-57397921 | Msa0991720:CDS | 30.0% | |
TTCATGAATGGTCAAAATCT+GGG | + | chr6_4:57397903-57397922 | Msa0991720:CDS | 30.0% | |
CGTTAAACTTGAAGATAAAG+AGG | + | chr6_4:57398066-57398085 | Msa0991720:CDS | 30.0% | |
!!! | TTGTTTTAAGCCTGTTAAGA+AGG | + | chr6_4:57398111-57398130 | Msa0991720:CDS | 30.0% |
ATATCATCTTCCTTCTTAAC+AGG | - | chr6_4:57398124-57398143 | None:intergenic | 30.0% | |
!! | GGTTTTTAAGCATGTTAAGA+AGG | + | chr6_4:57398165-57398184 | Msa0991720:CDS | 30.0% |
! | ACAGTATACAAAGTTTTCAC+CGG | - | chr6_4:57398239-57398258 | None:intergenic | 30.0% |
AAAACTTTGTATACTGTCCT+AGG | + | chr6_4:57398242-57398261 | Msa0991720:CDS | 30.0% | |
AAACTTTGTATACTGTCCTA+GGG | + | chr6_4:57398243-57398262 | Msa0991720:CDS | 30.0% | |
AGGCAATTGATTGCTTAAAT+TGG | + | chr6_4:57398452-57398471 | Msa0991720:CDS | 30.0% | |
! | TTGAGTTGTTGATTAAATGC+AGG | + | chr6_4:57398592-57398611 | Msa0991720:intron | 30.0% |
! | TGAGTTGTTGATTAAATGCA+GGG | + | chr6_4:57398593-57398612 | Msa0991720:intron | 30.0% |
AATGTGAACGATTTCTTTAC+CGG | + | chr6_4:57398623-57398642 | Msa0991720:CDS | 30.0% | |
! | CTTTTCTCAAACAAATTAGG+AGG | - | chr6_4:57398710-57398729 | None:intergenic | 30.0% |
GGATCCGTATATTCTTTAAA+CGG | - | chr6_4:57398770-57398789 | None:intergenic | 30.0% | |
! | TTTTGCTTATGGATTTTCTG+AGG | + | chr6_4:57398856-57398875 | Msa0991720:CDS | 30.0% |
ACTTGGAACTTCATAATTGT+CGG | - | chr6_4:57399043-57399062 | None:intergenic | 30.0% | |
TATGAAGTTCCAAGTTCATT+TGG | + | chr6_4:57399149-57399168 | Msa0991720:intron | 30.0% | |
AATCAACAACCAAATGAACT+TGG | - | chr6_4:57399161-57399180 | None:intergenic | 30.0% | |
GAGAAAACAAGAGAAAATGA+AGG | - | chr6_4:57400004-57400023 | None:intergenic | 30.0% | |
TCACTAACAATCATAAGAAG+AGG | + | chr6_4:57400137-57400156 | Msa0991720:CDS | 30.0% | |
!! | ACAATTCAACATTGACTTGT+AGG | + | chr6_4:57400251-57400270 | Msa0991720:intron | 30.0% |
! | GAAGGTAAATTTTACGTACA+TGG | + | chr6_4:57400355-57400374 | Msa0991720:intron | 30.0% |
TCAACATATACACTTCCTTA+TGG | - | chr6_4:57400417-57400436 | None:intergenic | 30.0% | |
CATTTAAACATTCCTAAAGG+AGG | + | chr6_4:57400557-57400576 | Msa0991720:intron | 30.0% | |
TGATATCTTAGTATTTGGGT+TGG | + | chr6_4:57400717-57400736 | Msa0991720:intron | 30.0% | |
AGTGATTTACTGGAAGTTTA+CGG | - | chr6_4:57400977-57400996 | None:intergenic | 30.0% | |
CATATAGCAGTTTCAAAATC+TGG | + | chr6_4:57401139-57401158 | Msa0991720:intron | 30.0% | |
CGAAATCGTAACACATTTAT+CGG | + | chr6_4:57401218-57401237 | Msa0991720:intron | 30.0% | |
ACTGAAAATTTGATGGGAAT+AGG | + | chr6_4:57401354-57401373 | Msa0991720:intron | 30.0% | |
ACAGAAATACATACACTAGA+TGG | - | chr6_4:57401465-57401484 | None:intergenic | 30.0% | |
!! | ACTTTTGTGTACTGTTTTTC+TGG | + | chr6_4:57401543-57401562 | Msa0991720:intron | 30.0% |
TTTCTTCTTCTTTGTCGCTA+GGG | - | chr6_4:57396445-57396464 | None:intergenic | 35.0% | |
TTGTGCCAAAGAGAAGAAAA+AGG | + | chr6_4:57396650-57396669 | Msa0991720:CDS | 35.0% | |
! | CTTCACCTTTTTCTTCTCTT+TGG | - | chr6_4:57396658-57396677 | None:intergenic | 35.0% |
AGAGAAGAAAAAGGTGAAGA+AGG | + | chr6_4:57396659-57396678 | Msa0991720:CDS | 35.0% | |
! | CTTTTCCGTTTTCTTCTCTT+TGG | - | chr6_4:57396695-57396714 | None:intergenic | 35.0% |
AGAGAAGAAAACGGAAAAGA+AGG | + | chr6_4:57396696-57396715 | Msa0991720:CDS | 35.0% | |
AAAGAAGGAGAAGAAAATGC+TGG | + | chr6_4:57396711-57396730 | Msa0991720:CDS | 35.0% | |
GAAACTTGATTGCATGCATA+AGG | + | chr6_4:57396740-57396759 | Msa0991720:CDS | 35.0% | |
TTACAAATGCCACAACACAA+AGG | - | chr6_4:57396869-57396888 | None:intergenic | 35.0% | |
TTCAGCATCTTATTCTCTAC+AGG | + | chr6_4:57396953-57396972 | Msa0991720:intron | 35.0% | |
CTCAATGTCATGATCATTGT+TGG | - | chr6_4:57397000-57397019 | None:intergenic | 35.0% | |
TCAAGAACAAATTGCTGAGA+AGG | + | chr6_4:57397070-57397089 | Msa0991720:CDS | 35.0% | |
GGCAGAGAAAGAAAAAAGAA+AGG | - | chr6_4:57397151-57397170 | None:intergenic | 35.0% | |
GTGTCTGACCTATAAAACAT+AGG | - | chr6_4:57397172-57397191 | None:intergenic | 35.0% | |
TTCAGTGTAGTCATATGTGT+CGG | - | chr6_4:57397282-57397301 | None:intergenic | 35.0% | |
! | TTTCATCTCATGCATGCTTT+TGG | + | chr6_4:57397482-57397501 | Msa0991720:intron | 35.0% |
! | TTCATCTCATGCATGCTTTT+GGG | + | chr6_4:57397483-57397502 | Msa0991720:intron | 35.0% |
!!! | CTTTTGGGTTGAACATTACA+GGG | + | chr6_4:57397498-57397517 | Msa0991720:intron | 35.0% |
ACTGGTAGGGACTTATAATT+TGG | + | chr6_4:57397582-57397601 | Msa0991720:intron | 35.0% | |
! | TTGATAACCTCAAACTCAAC+TGG | - | chr6_4:57397797-57397816 | None:intergenic | 35.0% |
! | AGTTTGAGGTTATCAACCAA+GGG | + | chr6_4:57397801-57397820 | Msa0991720:CDS | 35.0% |
TTTGACCATTCATGAATCTC+AGG | - | chr6_4:57397899-57397918 | None:intergenic | 35.0% | |
!!! | CATTATTAGCTTTTGGACAG+CGG | - | chr6_4:57397955-57397974 | None:intergenic | 35.0% |
AAAGAGGAGACTCTTGATAA+TGG | + | chr6_4:57398082-57398101 | Msa0991720:CDS | 35.0% | |
ATGATATACCGAATGATCCA+GGG | + | chr6_4:57398137-57398156 | Msa0991720:CDS | 35.0% | |
ATGATATACCGAATGATCCA+GGG | + | chr6_4:57398137-57398156 | Msa0991720:CDS | 35.0% | |
AGATCTGCAAAATCATGAGA+AGG | + | chr6_4:57398270-57398289 | Msa0991720:CDS | 35.0% | |
! | TAAGACATTTTCAATGGCAC+TGG | + | chr6_4:57398296-57398315 | Msa0991720:CDS | 35.0% |
ATGTGAACGATTTCTTTACC+GGG | + | chr6_4:57398624-57398643 | Msa0991720:CDS | 35.0% | |
CGTATATTCTTTAAACGGCA+GGG | - | chr6_4:57398765-57398784 | None:intergenic | 35.0% | |
! | CCTGCCGTTTAAAGAATATA+CGG | + | chr6_4:57398763-57398782 | Msa0991720:CDS | 35.0% |
CTACATCAGACATATCACAA+TGG | - | chr6_4:57398913-57398932 | None:intergenic | 35.0% | |
! | CATTCTAGAAAACACAGTTC+AGG | - | chr6_4:57398956-57398975 | None:intergenic | 35.0% |
GATGTGTACAATGTCTTTGT+AGG | + | chr6_4:57399002-57399021 | Msa0991720:intron | 35.0% | |
ATTATCAAGCCTGTCAACAT+TGG | - | chr6_4:57399684-57399703 | None:intergenic | 35.0% | |
! | AAATGAAAGTGCACTAGTCA+TGG | + | chr6_4:57399757-57399776 | Msa0991720:CDS | 35.0% |
CTAGTCATGGAAAATGAAAG+TGG | + | chr6_4:57399770-57399789 | Msa0991720:CDS | 35.0% | |
AAGTGGATCATGTGATATGA+AGG | + | chr6_4:57399787-57399806 | Msa0991720:CDS | 35.0% | |
! | ATCGACTTTACCTGCTTTAT+AGG | - | chr6_4:57399944-57399963 | None:intergenic | 35.0% |
TAAAAGGTCTGATCATGGAT+GGG | - | chr6_4:57400115-57400134 | None:intergenic | 35.0% | |
ATAAAAGGTCTGATCATGGA+TGG | - | chr6_4:57400116-57400135 | None:intergenic | 35.0% | |
TGAGATAAAAGGTCTGATCA+TGG | - | chr6_4:57400120-57400139 | None:intergenic | 35.0% | |
CAATCATAAGAAGAGGCTTA+AGG | + | chr6_4:57400144-57400163 | Msa0991720:CDS | 35.0% | |
! | TTCAGATTTCTGACTTGATG+AGG | - | chr6_4:57400338-57400357 | None:intergenic | 35.0% |
TCATCAAGTCAGAAATCTGA+AGG | + | chr6_4:57400337-57400356 | Msa0991720:CDS | 35.0% | |
GCCAAGTTCTTAAAAGTTTG+AGG | + | chr6_4:57400495-57400514 | Msa0991720:intron | 35.0% | |
!! | GCCTCAAACTTTTAAGAACT+TGG | - | chr6_4:57400499-57400518 | None:intergenic | 35.0% |
TTAAACATTCCTAAAGGAGG+CGG | + | chr6_4:57400560-57400579 | Msa0991720:intron | 35.0% | |
ACATAAAAGTGATGAGCTAG+TGG | - | chr6_4:57400805-57400824 | None:intergenic | 35.0% | |
TTTGTCTCTCCTGAAAATGT+TGG | + | chr6_4:57400924-57400943 | Msa0991720:CDS | 35.0% | |
!! | GGTATTCTAGACTACTTTTC+TGG | + | chr6_4:57401019-57401038 | Msa0991720:intron | 35.0% |
CAGTATACTTCACCTATTGT+TGG | + | chr6_4:57401175-57401194 | Msa0991720:intron | 35.0% | |
TTTACCATCTAGATTCTGCA+AGG | + | chr6_4:57401289-57401308 | Msa0991720:intron | 35.0% | |
TTACAATGCAGTTACTAGAG+CGG | - | chr6_4:57401326-57401345 | None:intergenic | 35.0% | |
TAGAAAAGTTGGAGAAAGCA+AGG | + | chr6_4:57401628-57401647 | Msa0991720:CDS | 35.0% | |
GTATACTTTGCTCACTTTGT+TGG | + | chr6_4:57401709-57401728 | Msa0991720:intron | 35.0% | |
TTGCCTACCATTCAATTTAC+AGG | + | chr6_4:57401954-57401973 | Msa0991720:CDS | 35.0% | |
AGACCTGTAAATTGAATGGT+AGG | - | chr6_4:57401960-57401979 | None:intergenic | 35.0% | |
GATGGTAGAGATTCAGTATC+TGG | + | chr6_4:57396405-57396424 | Msa0991720:CDS | 40.0% | |
GTTTCTTCTTCTTTGTCGCT+AGG | - | chr6_4:57396446-57396465 | None:intergenic | 40.0% | |
GCGACAAAGAAGAAGAAACA+TGG | + | chr6_4:57396447-57396466 | Msa0991720:CDS | 40.0% | |
AGAGAGTAATGCAGAGAAGA+AGG | + | chr6_4:57396473-57396492 | Msa0991720:CDS | 40.0% | |
AGCGATCCAAGAAAAAAACG+TGG | + | chr6_4:57396540-57396559 | Msa0991720:CDS | 40.0% | |
GGAACAAGTAGTGAAGAAGA+AGG | + | chr6_4:57396584-57396603 | Msa0991720:CDS | 40.0% | |
GTGAAGAAGAAGGAAAATCG+AGG | + | chr6_4:57396594-57396613 | Msa0991720:CDS | 40.0% | |
AGAAGAAGGAAAATCGAGGT+AGG | + | chr6_4:57396598-57396617 | Msa0991720:CDS | 40.0% | |
AGGAAAATCGAGGTAGGAAA+AGG | + | chr6_4:57396604-57396623 | Msa0991720:CDS | 40.0% | |
GAGATAGAAGCCAAGATTCA+AGG | + | chr6_4:57397092-57397111 | Msa0991720:CDS | 40.0% | |
TTTATAGGTCAGACACTCCT+CGG | + | chr6_4:57397176-57397195 | Msa0991720:intron | 40.0% | |
!! | AATTATTTGTGGTGTCGGTG+TGG | + | chr6_4:57397325-57397344 | Msa0991720:intron | 40.0% |
!!! | GCTTTTGGGTTGAACATTAC+AGG | + | chr6_4:57397497-57397516 | Msa0991720:intron | 40.0% |
CTAAAGATCAGTGTGCATAC+TGG | + | chr6_4:57397564-57397583 | Msa0991720:CDS | 40.0% | |
! | AGCATTTTGTACAGCTTCTG+TGG | - | chr6_4:57397709-57397728 | None:intergenic | 40.0% |
! | GAGTTTGAGGTTATCAACCA+AGG | + | chr6_4:57397800-57397819 | Msa0991720:CDS | 40.0% |
ATGAATGGTCAAAATCTGGG+TGG | + | chr6_4:57397906-57397925 | Msa0991720:CDS | 40.0% | |
AACTCAGAGATGCAATTTGG+TGG | - | chr6_4:57398016-57398035 | None:intergenic | 40.0% | |
ACCAAATTGCATCTCTGAGT+TGG | + | chr6_4:57398015-57398034 | Msa0991720:CDS | 40.0% | |
ACCAACTCAGAGATGCAATT+TGG | - | chr6_4:57398019-57398038 | None:intergenic | 40.0% | |
GATGATATACCGAATGATCC+AGG | + | chr6_4:57398136-57398155 | Msa0991720:CDS | 40.0% | |
GATGATATACCGAATGATCC+AGG | + | chr6_4:57398136-57398155 | Msa0991720:CDS | 40.0% | |
! | GTGGTTTTTCGTGAAGATTC+CGG | + | chr6_4:57398217-57398236 | Msa0991720:CDS | 40.0% |
! | TTTTGCAGATCTATAGCCCT+AGG | - | chr6_4:57398262-57398281 | None:intergenic | 40.0% |
! | TTTCAATGGCACTGGAGAAA+AGG | + | chr6_4:57398304-57398323 | Msa0991720:CDS | 40.0% |
! | TTCAATGGCACTGGAGAAAA+GGG | + | chr6_4:57398305-57398324 | Msa0991720:CDS | 40.0% |
AGTACGTTGCTGACAATTAC+AGG | - | chr6_4:57398334-57398353 | None:intergenic | 40.0% | |
GTACTTGAATCAAGCACATC+TGG | + | chr6_4:57398349-57398368 | Msa0991720:CDS | 40.0% | |
AAGCACATCTGGTATAAGCT+GGG | + | chr6_4:57398360-57398379 | Msa0991720:CDS | 40.0% | |
CAATTCAGTTTCGGATGTGA+AGG | + | chr6_4:57398432-57398451 | Msa0991720:CDS | 40.0% | |
! | TGATTGCTTAAATTGGTGCC+AGG | + | chr6_4:57398459-57398478 | Msa0991720:CDS | 40.0% |
TTCTTTACCGGGTACACAAA+TGG | + | chr6_4:57398635-57398654 | Msa0991720:CDS | 40.0% | |
ACACAAATGGTCGCAAAGAT+AGG | + | chr6_4:57398648-57398667 | Msa0991720:CDS | 40.0% | |
CCGTATATTCTTTAAACGGC+AGG | - | chr6_4:57398766-57398785 | None:intergenic | 40.0% | |
!! | AGGTTAAGAGCAGCTTTGAA+AGG | - | chr6_4:57398791-57398810 | None:intergenic | 40.0% |
! | CTGCCTGATAATGTTCAGAT+GGG | + | chr6_4:57398821-57398840 | Msa0991720:CDS | 40.0% |
AGTCCCATCTGAACATTATC+AGG | - | chr6_4:57398827-57398846 | None:intergenic | 40.0% | |
!! | TATGGATTTTCTGAGGAGCT+TGG | + | chr6_4:57398863-57398882 | Msa0991720:CDS | 40.0% |
!! | ATGGATTTTCTGAGGAGCTT+GGG | + | chr6_4:57398864-57398883 | Msa0991720:CDS | 40.0% |
! | ATCACAATGGAGCTTTGTCA+CGG | - | chr6_4:57398900-57398919 | None:intergenic | 40.0% |
TGAAGCATGAACGATGACTT+CGG | + | chr6_4:57399409-57399428 | Msa0991720:intron | 40.0% | |
! | GTTGACTCATATTGCCAAAG+TGG | + | chr6_4:57399559-57399578 | Msa0991720:CDS | 40.0% |
! | CTTCTTGGTGATAATCAGGA+TGG | + | chr6_4:57399653-57399672 | Msa0991720:intron | 40.0% |
! | TTGCTCATCTGAAGCAGTTA+CGG | - | chr6_4:57399717-57399736 | None:intergenic | 40.0% |
GCAAAATAGTGTTCGAGTCA+TGG | + | chr6_4:57399733-57399752 | Msa0991720:CDS | 40.0% | |
TGGATCATGTGATATGAAGG+TGG | + | chr6_4:57399790-57399809 | Msa0991720:CDS | 40.0% | |
ATAGTTTAGATGGTGCTCTG+TGG | + | chr6_4:57399834-57399853 | Msa0991720:CDS | 40.0% | |
TAGTTTAGATGGTGCTCTGT+GGG | + | chr6_4:57399835-57399854 | Msa0991720:CDS | 40.0% | |
! | GTGCTCTGTGGGATATTTTT+CGG | + | chr6_4:57399846-57399865 | Msa0991720:CDS | 40.0% |
!! | AGAAGCATTTCAGAGAGTTC+AGG | + | chr6_4:57399903-57399922 | Msa0991720:CDS | 40.0% |
CTATTGCTCTCCTATAAAGC+AGG | + | chr6_4:57399931-57399950 | Msa0991720:CDS | 40.0% | |
TCATAAGAAGAGGCTTAAGG+AGG | + | chr6_4:57400147-57400166 | Msa0991720:CDS | 40.0% | |
!! | TTCGTACGTTGTTTGGTTTG+TGG | + | chr6_4:57400196-57400215 | Msa0991720:intron | 40.0% |
AGCTTCTGAACAAAACTCCA+AGG | - | chr6_4:57400284-57400303 | None:intergenic | 40.0% | |
!!! | TGGAGTTTTGTTCAGAAGCT+AGG | + | chr6_4:57400284-57400303 | Msa0991720:CDS | 40.0% |
GACATTTAGATCGTGACTCA+AGG | + | chr6_4:57400654-57400673 | Msa0991720:intron | 40.0% | |
!! | ATTGGTAGCGTGATGGTTAT+AGG | + | chr6_4:57400686-57400705 | Msa0991720:intron | 40.0% |
GACAAAATCAAGTGCAACCT+TGG | - | chr6_4:57400910-57400929 | None:intergenic | 40.0% | |
! | AAGCACTCACCAACATTTTC+AGG | - | chr6_4:57400936-57400955 | None:intergenic | 40.0% |
TCTGTGGAACAGTGATTTAC+TGG | - | chr6_4:57400987-57401006 | None:intergenic | 40.0% | |
AGTAAATCACTGTTCCACAG+AGG | + | chr6_4:57400986-57401005 | Msa0991720:CDS | 40.0% | |
AGCATGACTTTGCCAACAAT+AGG | - | chr6_4:57401190-57401209 | None:intergenic | 40.0% | |
!! | AGATTCTGCAAGGTGCTATT+TGG | + | chr6_4:57401299-57401318 | Msa0991720:intron | 40.0% |
!!! | TTTTCTGGTTGCTGCTTCTT+TGG | + | chr6_4:57401558-57401577 | Msa0991720:intron | 40.0% |
CATACATGCTATGCTTGATG+CGG | + | chr6_4:57401605-57401624 | Msa0991720:CDS | 40.0% | |
CGTCAGACCTGTAAATTGAA+TGG | - | chr6_4:57401964-57401983 | None:intergenic | 40.0% | |
ATCTCTACCATCCAGCTTCA+AGG | - | chr6_4:57396397-57396416 | None:intergenic | 45.0% | |
GAGTAATGCAGAGAAGAAGG+AGG | + | chr6_4:57396476-57396495 | Msa0991720:CDS | 45.0% | |
CATGCATGTCCTTTGTGTTG+TGG | + | chr6_4:57396857-57396876 | Msa0991720:intron | 45.0% | |
AGATCAGTGTGCATACTGGT+AGG | + | chr6_4:57397568-57397587 | Msa0991720:intron | 45.0% | |
GATCAGTGTGCATACTGGTA+GGG | + | chr6_4:57397569-57397588 | Msa0991720:intron | 45.0% | |
TGCAGATCCAGTTGAGTTTG+AGG | + | chr6_4:57397787-57397806 | Msa0991720:CDS | 45.0% | |
CATGCAGATAATCTTGCCCT+TGG | - | chr6_4:57397820-57397839 | None:intergenic | 45.0% | |
CAAGGGCAAGATTATCTGCA+TGG | + | chr6_4:57397818-57397837 | Msa0991720:CDS | 45.0% | |
TTCATGAATCTCAGGCTGAG+CGG | - | chr6_4:57397891-57397910 | None:intergenic | 45.0% | |
CTCAGCCTGAGATTCATGAA+TGG | + | chr6_4:57397891-57397910 | Msa0991720:CDS | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | + | chr6_4:57398141-57398160 | Msa0991720:CDS | 45.0% | |
TGCTTAAAAACCACCTTCCC+TGG | - | chr6_4:57398157-57398176 | None:intergenic | 45.0% | |
TATACCGAATGATCCAGGGA+AGG | + | chr6_4:57398141-57398160 | Msa0991720:CDS | 45.0% | |
! | TCAATGGCACTGGAGAAAAG+GGG | + | chr6_4:57398306-57398325 | Msa0991720:CDS | 45.0% |
CAAGCACATCTGGTATAAGC+TGG | + | chr6_4:57398359-57398378 | Msa0991720:CDS | 45.0% | |
AATGCATGCCACATGACAAG+CGG | - | chr6_4:57398388-57398407 | None:intergenic | 45.0% | |
TTTGCGACCATTTGTGTACC+CGG | - | chr6_4:57398645-57398664 | None:intergenic | 45.0% | |
ATGATATGAGCTCGGCACAA+TGG | - | chr6_4:57398742-57398761 | None:intergenic | 45.0% | |
TATCAGGCAGCTTCAAAGCA+AGG | - | chr6_4:57398811-57398830 | None:intergenic | 45.0% | |
! | GCTGCCTGATAATGTTCAGA+TGG | + | chr6_4:57398820-57398839 | Msa0991720:CDS | 45.0% |
! | CACGAATTCGAGTTCCACTT+TGG | - | chr6_4:57399576-57399595 | None:intergenic | 45.0% |
! | GGAGCTTCTTGGTGATAATC+AGG | + | chr6_4:57399649-57399668 | Msa0991720:intron | 45.0% |
ATGGAGAGACCAATGTTGAC+AGG | + | chr6_4:57399672-57399691 | Msa0991720:CDS | 45.0% | |
! | TGCTCATCTGAAGCAGTTAC+GGG | - | chr6_4:57399716-57399735 | None:intergenic | 45.0% |
!! | GTGGGATATTTTTCGGAGAG+AGG | + | chr6_4:57399853-57399872 | Msa0991720:CDS | 45.0% |
AAGAGGCTTAAGGAGGAGTA+TGG | + | chr6_4:57400154-57400173 | Msa0991720:CDS | 45.0% | |
GACTTGTAGGAATTGAGCCT+TGG | + | chr6_4:57400264-57400283 | Msa0991720:intron | 45.0% | |
!!! | GATGCTGTTTTCATTCCAGC+TGG | + | chr6_4:57400308-57400327 | Msa0991720:CDS | 45.0% |
TGAGTGCTTGCGTTATACAG+AGG | + | chr6_4:57400947-57400966 | Msa0991720:CDS | 45.0% | |
CTGTTCCACAGAGGACAAAT+TGG | + | chr6_4:57400995-57401014 | Msa0991720:CDS | 45.0% | |
TTCCACAGAGGACAAATTGG+AGG | + | chr6_4:57400998-57401017 | Msa0991720:CDS | 45.0% | |
TACCTCCAATTTGTCCTCTG+TGG | - | chr6_4:57401003-57401022 | None:intergenic | 45.0% | |
CAGTTTCAAAATCTGGGCCT+GGG | + | chr6_4:57401146-57401165 | Msa0991720:intron | 45.0% | |
AGTTTCAAAATCTGGGCCTG+GGG | + | chr6_4:57401147-57401166 | Msa0991720:intron | 45.0% | |
AGCACCTTGCAGAATCTAGA+TGG | - | chr6_4:57401296-57401315 | None:intergenic | 45.0% | |
!! | CTGCTTCTTTGGTAACGAAC+AGG | + | chr6_4:57401569-57401588 | Msa0991720:intron | 45.0% |
GCTTGATGCGGTAGAAAAGT+TGG | + | chr6_4:57401617-57401636 | Msa0991720:CDS | 45.0% | |
GGTCAGTGATTGCAAACTTG+AGG | + | chr6_4:57401649-57401668 | Msa0991720:CDS | 45.0% | |
GATTGCAAACTTGAGGCGAA+AGG | + | chr6_4:57401656-57401675 | Msa0991720:CDS | 45.0% | |
ATGGCTTCCTTGAAGCTGGA+TGG | + | chr6_4:57396387-57396406 | Msa0991720:CDS | 50.0% | |
GCAAGAAGAGAGAGTCCTTG+AGG | - | chr6_4:57397126-57397145 | None:intergenic | 50.0% | |
GGCAGTGTACGTGTCGTATT+CGG | + | chr6_4:57397346-57397365 | Msa0991720:intron | 50.0% | |
GGGCAAGATTATCTGCATGG+TGG | + | chr6_4:57397821-57397840 | Msa0991720:CDS | 50.0% | |
TCAAAATCTGGGTGGCATGC+CGG | + | chr6_4:57397914-57397933 | Msa0991720:CDS | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | - | chr6_4:57398148-57398167 | None:intergenic | 50.0% | |
ACCACCTTCCCTGGATCATT+CGG | - | chr6_4:57398148-57398167 | None:intergenic | 50.0% | |
TCACGAAAAACCACCTTCCC+TGG | - | chr6_4:57398211-57398230 | None:intergenic | 50.0% | |
ATCAGTCGTCTGAGAAGCTC+AGG | - | chr6_4:57398503-57398522 | None:intergenic | 50.0% | |
GTCGCAAAGATAGGCTCGAT+TGG | + | chr6_4:57398657-57398676 | Msa0991720:CDS | 50.0% | |
!! | GATTTTCTGAGGAGCTTGGG+CGG | + | chr6_4:57398867-57398886 | Msa0991720:CDS | 50.0% |
!! | ATTTTCTGAGGAGCTTGGGC+GGG | + | chr6_4:57398868-57398887 | Msa0991720:CDS | 50.0% |
AGCACCTTGAGCAAGACAAG+AGG | + | chr6_4:57399627-57399646 | Msa0991720:intron | 50.0% | |
GCACCTTGAGCAAGACAAGA+GGG | + | chr6_4:57399628-57399647 | Msa0991720:intron | 50.0% | |
CAAGACAAGAGGGAGCTTCT+TGG | + | chr6_4:57399638-57399657 | Msa0991720:intron | 50.0% | |
GAAGCAGTTACGGGAGAAGA+CGG | - | chr6_4:57399707-57399726 | None:intergenic | 50.0% | |
ACTTGATGAGGACAACCAGC+TGG | - | chr6_4:57400326-57400345 | None:intergenic | 50.0% | |
CATTCCTAAAGGAGGCGGTT+CGG | + | chr6_4:57400565-57400584 | Msa0991720:intron | 50.0% | |
! | TTTTCCGAACCGCCTCCTTT+AGG | - | chr6_4:57400572-57400591 | None:intergenic | 50.0% |
! | AAAGGAGGCGGTTCGGAAAA+TGG | + | chr6_4:57400572-57400591 | Msa0991720:intron | 50.0% |
TGTGTTGCAGTCATGCACCA+AGG | + | chr6_4:57400890-57400909 | Msa0991720:intron | 50.0% | |
GCAGTTTCAAAATCTGGGCC+TGG | + | chr6_4:57401145-57401164 | Msa0991720:intron | 50.0% | |
GTTTCAAAATCTGGGCCTGG+GGG | + | chr6_4:57401148-57401167 | Msa0991720:intron | 50.0% | |
GAAGTATACTGAAAGCCCCC+AGG | - | chr6_4:57401166-57401185 | None:intergenic | 50.0% | |
GGTCAGACACTCCTCGGATT+AGG | + | chr6_4:57397182-57397201 | Msa0991720:intron | 55.0% | |
! | TCCTCGGATTAGGCGTGTCT+CGG | + | chr6_4:57397192-57397211 | Msa0991720:intron | 55.0% |
! | GATTAGGCGTGTCTCGGTGT+CGG | + | chr6_4:57397198-57397217 | Msa0991720:intron | 55.0% |
! | GACACAGTAGGCGCGTGTTT+TGG | + | chr6_4:57397220-57397239 | Msa0991720:intron | 55.0% |
!!! | GTAGGCGCGTGTTTTGGTGT+CGG | + | chr6_4:57397226-57397245 | Msa0991720:intron | 55.0% |
!! | TGTCGGTGTCGTGTCAGTGT+CGG | - | chr6_4:57397265-57397284 | None:intergenic | 55.0% |
ACCGAATGATCCAGGGAAGG+TGG | + | chr6_4:57398144-57398163 | Msa0991720:CDS | 55.0% | |
ACCGAATGATCCAGGGAAGG+TGG | + | chr6_4:57398144-57398163 | Msa0991720:CDS | 55.0% | |
ATGAGCTCGGCACAATGGTG+TGG | - | chr6_4:57398737-57398756 | None:intergenic | 55.0% | |
CGGCAGGGATGATATGAGCT+CGG | - | chr6_4:57398750-57398769 | None:intergenic | 55.0% | |
!! | TTTTCTGAGGAGCTTGGGCG+GGG | + | chr6_4:57398869-57398888 | Msa0991720:CDS | 55.0% |
GCTCCCTCTTGTCTTGCTCA+AGG | - | chr6_4:57399634-57399653 | None:intergenic | 55.0% | |
AGATCGTGACTCAAGGAGCG+TGG | + | chr6_4:57400661-57400680 | Msa0991720:intron | 55.0% | |
! | GACTCAAGGAGCGTGGTGAT+TGG | + | chr6_4:57400668-57400687 | Msa0991720:intron | 55.0% |
!! | CGTGGTGATTGGTAGCGTGA+TGG | + | chr6_4:57400679-57400698 | Msa0991720:intron | 55.0% |
ACCGAGACACGCCTAATCCG+AGG | - | chr6_4:57397196-57397215 | None:intergenic | 60.0% | |
!! | GTCTCGGTGTCGGACACAGT+AGG | + | chr6_4:57397208-57397227 | Msa0991720:intron | 60.0% |
! | TGTCGTGTCAGTGTCGGGCA+CGG | - | chr6_4:57397259-57397278 | None:intergenic | 60.0% |
!! | GTCGGTGTCGTGTCAGTGTC+GGG | - | chr6_4:57397264-57397283 | None:intergenic | 60.0% |
AAGCTCCCCACGACGAAGCT+CGG | - | chr6_4:57397759-57397778 | None:intergenic | 60.0% | |
CTTCGTCGTGGGGAGCTTCT+AGG | + | chr6_4:57397761-57397780 | Msa0991720:CDS | 60.0% | |
GCGGATGCTACCATCACTGC+CGG | - | chr6_4:57397936-57397955 | None:intergenic | 60.0% | |
GCTGGGAACCGCTTGTCATG+TGG | + | chr6_4:57398377-57398396 | Msa0991720:CDS | 60.0% | |
CGGAGCAGCAGCGGAGACAA+AGG | - | chr6_4:57397739-57397758 | None:intergenic | 65.0% | |
GACGAAGCTCGGAGCAGCAG+CGG | - | chr6_4:57397748-57397767 | None:intergenic | 65.0% | |
TGCTGCTCCGAGCTTCGTCG+TGG | + | chr6_4:57397749-57397768 | Msa0991720:CDS | 65.0% | |
GCTGCTCCGAGCTTCGTCGT+GGG | + | chr6_4:57397750-57397769 | Msa0991720:CDS | 65.0% | |
CTGCTCCGAGCTTCGTCGTG+GGG | + | chr6_4:57397751-57397770 | Msa0991720:CDS | 65.0% | |
CGTCGTGGGGAGCTTCTAGG+TGG | + | chr6_4:57397764-57397783 | Msa0991720:CDS | 65.0% | |
GGGTGGCATGCCGGCAGTGA+TGG | + | chr6_4:57397923-57397942 | Msa0991720:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 57396387 | 57402000 | 57396387 | ID=Msa0991720;Name=Msa0991720 |
chr6_4 | mRNA | 57396387 | 57402000 | 57396387 | ID=Msa0991720-mRNA-1;Parent=Msa0991720;Name=Msa0991720-mRNA-1;_AED=0.46;_eAED=0.47;_QI=0|0|0|0.25|1|1|12|0|816 |
chr6_4 | exon | 57396387 | 57396761 | 57396387 | ID=Msa0991720-mRNA-1:exon:11486;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57396975 | 57397113 | 57396975 | ID=Msa0991720-mRNA-1:exon:11487;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57397519 | 57397585 | 57397519 | ID=Msa0991720-mRNA-1:exon:11488;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57397676 | 57398480 | 57397676 | ID=Msa0991720-mRNA-1:exon:11489;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57398614 | 57398931 | 57398614 | ID=Msa0991720-mRNA-1:exon:11490;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57399551 | 57399592 | 57399551 | ID=Msa0991720-mRNA-1:exon:11491;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57399671 | 57399952 | 57399671 | ID=Msa0991720-mRNA-1:exon:11492;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57400103 | 57400175 | 57400103 | ID=Msa0991720-mRNA-1:exon:11493;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57400273 | 57400358 | 57400273 | ID=Msa0991720-mRNA-1:exon:11494;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57400900 | 57401019 | 57400900 | ID=Msa0991720-mRNA-1:exon:11495;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57401591 | 57401677 | 57401591 | ID=Msa0991720-mRNA-1:exon:11496;Parent=Msa0991720-mRNA-1 |
chr6_4 | exon | 57401944 | 57402000 | 57401944 | ID=Msa0991720-mRNA-1:exon:11497;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57396387 | 57396761 | 57396387 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57396975 | 57397113 | 57396975 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57397519 | 57397585 | 57397519 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57397676 | 57398480 | 57397676 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57398614 | 57398931 | 57398614 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57399551 | 57399592 | 57399551 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57399671 | 57399952 | 57399671 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57400103 | 57400175 | 57400103 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57400273 | 57400358 | 57400273 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57400900 | 57401019 | 57400900 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57401591 | 57401677 | 57401591 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
chr6_4 | CDS | 57401944 | 57402000 | 57401944 | ID=Msa0991720-mRNA-1:cds;Parent=Msa0991720-mRNA-1 |
Gene Sequence |
Protein sequence |