Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996280 | XP_013452818.1 | 87.821 | 468 | 29 | 2 | 1 | 441 | 1 | 467 | 0.0 | 794 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996280 | sp|B3H5A8|RVE7_ARATH | 46.863 | 271 | 107 | 8 | 46 | 310 | 65 | 304 | 3.78e-57 | 195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996280 | A0A072UBN0 | 87.821 | 468 | 29 | 2 | 1 | 441 | 1 | 467 | 0.0 | 794 |
Gene ID | Type | Classification |
---|---|---|
Msa0996280 | TF | MYB-related |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996280 | MtrunA17_Chr6g0481061 | 87.821 | 468 | 29 | 2 | 1 | 441 | 1 | 467 | 0.0 | 794 |
Msa0996280 | MtrunA17_Chr3g0109791 | 45.082 | 244 | 119 | 5 | 23 | 261 | 23 | 256 | 9.05e-47 | 164 |
Msa0996280 | MtrunA17_Chr5g0433851 | 56.725 | 171 | 71 | 2 | 35 | 202 | 21 | 191 | 1.72e-44 | 160 |
Msa0996280 | MtrunA17_Chr1g0181771 | 57.843 | 102 | 35 | 2 | 38 | 139 | 28 | 121 | 5.93e-34 | 129 |
Msa0996280 | MtrunA17_Chr8g0348391 | 60.638 | 94 | 29 | 2 | 46 | 139 | 53 | 138 | 8.71e-33 | 126 |
Msa0996280 | MtrunA17_Chr6g0469431 | 58.763 | 97 | 32 | 2 | 46 | 142 | 39 | 127 | 5.81e-32 | 121 |
Msa0996280 | MtrunA17_Chr7g0276421 | 68.269 | 104 | 31 | 1 | 38 | 139 | 7 | 110 | 9.09e-32 | 128 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996280 | AT1G18330.1 | 46.863 | 271 | 107 | 8 | 46 | 310 | 39 | 278 | 1.72e-58 | 196 |
Msa0996280 | AT1G18330.2 | 46.863 | 271 | 107 | 8 | 46 | 310 | 65 | 304 | 3.84e-58 | 195 |
Msa0996280 | AT5G17300.1 | 64.596 | 161 | 41 | 4 | 40 | 196 | 38 | 186 | 8.16e-50 | 174 |
Msa0996280 | AT3G10113.1 | 42.804 | 271 | 93 | 8 | 46 | 310 | 54 | 268 | 1.45e-44 | 159 |
Msa0996280 | AT5G37260.1 | 46.186 | 236 | 89 | 7 | 33 | 266 | 12 | 211 | 8.44e-41 | 147 |
Msa0996280 | AT3G09600.1 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.48e-32 | 125 |
Msa0996280 | AT3G09600.7 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.48e-32 | 125 |
Msa0996280 | AT3G09600.4 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.69e-32 | 124 |
Msa0996280 | AT3G09600.2 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.89e-32 | 124 |
Msa0996280 | AT3G09600.6 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.89e-32 | 124 |
Msa0996280 | AT5G52660.1 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 1.02e-31 | 124 |
Msa0996280 | AT5G52660.2 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 1.03e-31 | 124 |
Msa0996280 | AT1G01520.1 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 6.14e-31 | 120 |
Msa0996280 | AT1G01520.2 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 6.56e-31 | 120 |
Msa0996280 | AT1G01520.4 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 6.56e-31 | 120 |
Msa0996280 | AT1G01520.3 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 7.22e-31 | 120 |
Msa0996280 | AT1G01060.4 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.30e-30 | 125 |
Msa0996280 | AT1G01060.8 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.38e-30 | 125 |
Msa0996280 | AT1G01060.2 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.38e-30 | 125 |
Msa0996280 | AT1G01060.3 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.38e-30 | 125 |
Msa0996280 | AT1G01060.1 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.38e-30 | 125 |
Msa0996280 | AT1G01060.7 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.38e-30 | 125 |
Msa0996280 | AT4G01280.1 | 60.638 | 94 | 29 | 2 | 46 | 139 | 48 | 133 | 1.53e-30 | 120 |
Msa0996280 | AT4G01280.2 | 60.638 | 94 | 29 | 2 | 46 | 139 | 48 | 133 | 1.56e-30 | 120 |
Msa0996280 | AT5G02840.3 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 1.89e-30 | 119 |
Msa0996280 | AT5G02840.1 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 2.00e-30 | 119 |
Msa0996280 | AT5G02840.2 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 2.00e-30 | 119 |
Msa0996280 | AT5G02840.4 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 2.09e-30 | 119 |
Msa0996280 | AT2G46830.1 | 63.529 | 85 | 31 | 0 | 38 | 122 | 5 | 89 | 3.05e-30 | 124 |
Msa0996280 | AT5G02840.5 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 3.53e-30 | 119 |
Msa0996280 | AT5G17300.2 | 57.143 | 119 | 35 | 4 | 82 | 196 | 5 | 111 | 2.10e-19 | 89.0 |
Msa0996280 | AT3G09600.3 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 7.67e-15 | 74.3 |
Msa0996280 | AT3G09600.8 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 7.67e-15 | 74.3 |
Msa0996280 | AT3G09600.5 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 1.04e-14 | 73.6 |
Msa0996280 | AT3G09600.9 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 1.04e-14 | 73.6 |
Find 124 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTCCAAATTCATCTTC+TGG | 0.125996 | 6_4:+74262743 | Msa0996280:five_prime_UTR |
CTTGAGGCTTTGAAACTTTA+TGG | 0.148316 | 6_4:+74264950 | Msa0996280:CDS |
CTCTTCCTCCTCAGATGGTT+TGG | 0.248334 | 6_4:-74265684 | None:intergenic |
TTGATATTGTTAGGGTGTTC+TGG | 0.249666 | 6_4:+74263116 | Msa0996280:five_prime_UTR |
TCGAATCTGAACTGCAGTTT+TGG | 0.267753 | 6_4:-74265104 | None:intergenic |
CCTCAGATGGTTTGGATGTC+TGG | 0.272930 | 6_4:-74265676 | None:intergenic |
TTCTTAATCCTGTGCCTCTT+AGG | 0.290915 | 6_4:+74266522 | Msa0996280:CDS |
AGTGACCCAGAAGATGAATT+TGG | 0.298388 | 6_4:-74262749 | None:intergenic |
CTTTGTTTAGTGATGGTATA+CGG | 0.298682 | 6_4:-74264893 | None:intergenic |
GATGAAAATTCTTTAATTGT+TGG | 0.314058 | 6_4:+74266749 | Msa0996280:CDS |
ATCTCGGTGGTGCAAGAATT+TGG | 0.321806 | 6_4:-74265611 | None:intergenic |
TCTCTCCAAATTCATCTTCT+GGG | 0.328630 | 6_4:+74262744 | Msa0996280:five_prime_UTR |
GTTTGGTCGAACACTCTCTA+TGG | 0.333118 | 6_4:+74266223 | Msa0996280:CDS |
ACCCTCTTCCAGATTTCTTA+AGG | 0.359010 | 6_4:-74266694 | None:intergenic |
AATCTTCATGCAGAACATAT+AGG | 0.364568 | 6_4:+74265079 | Msa0996280:intron |
GGAGTTGTCCTTAAGAAATC+TGG | 0.375864 | 6_4:+74266686 | Msa0996280:CDS |
TGGTGGCAGTTGATATTGTT+AGG | 0.377623 | 6_4:+74263107 | Msa0996280:intron |
GTTGCGCACTCGCCGACATA+TGG | 0.378386 | 6_4:-74266434 | None:intergenic |
AGCTATCAACTCTAATGAAA+TGG | 0.384116 | 6_4:+74266292 | Msa0996280:CDS |
ATCACTAGTATTAAGCTGTT+TGG | 0.389280 | 6_4:+74266206 | Msa0996280:intron |
TTCAGACTGTGATCCACCTT+TGG | 0.402680 | 6_4:-74264499 | None:intergenic |
GGTATGTCAATTGGCTGAAT+AGG | 0.403494 | 6_4:-74265368 | None:intergenic |
GGATGAAGGGGTTTCCTCTT+CGG | 0.405395 | 6_4:-74265401 | None:intergenic |
TCACTAAACAAAGGGAGAAA+TGG | 0.418116 | 6_4:+74264903 | Msa0996280:CDS |
AAATTCTTTAATTGTTGGCT+TGG | 0.423024 | 6_4:+74266754 | Msa0996280:CDS |
GGCACTAAGTCAACTGGAAC+AGG | 0.425108 | 6_4:+74264462 | Msa0996280:CDS |
CCTTTCTCTTCCTCCTCAGA+TGG | 0.426336 | 6_4:-74265689 | None:intergenic |
AAAATTGAGACTTACAAAAT+CGG | 0.427561 | 6_4:+74262824 | Msa0996280:five_prime_UTR |
ATCTTCATGCAGAACATATA+GGG | 0.428042 | 6_4:+74265080 | Msa0996280:intron |
CAGCTTGTCGCCTGTTGAAA+AGG | 0.429297 | 6_4:+74265643 | Msa0996280:CDS |
TTCCTCTTCGGCCGAGGAGG+AGG | 0.434146 | 6_4:-74265389 | None:intergenic |
GGACTTTCAGCACTGCCATC+AGG | 0.443949 | 6_4:-74265347 | None:intergenic |
GAGAATGAAGCAATGGAAGA+AGG | 0.450693 | 6_4:-74262717 | None:intergenic |
TCAACTGATTTGCGAGGGTA+TGG | 0.453549 | 6_4:-74265422 | None:intergenic |
GTTCAAGGCACTAAGTCAAC+TGG | 0.454976 | 6_4:+74264456 | Msa0996280:CDS |
TGAAGCAATGGAAGAAGGTT+GGG | 0.455214 | 6_4:-74262712 | None:intergenic |
TTTCTCCCTTTGTTTAGTGA+TGG | 0.457327 | 6_4:-74264900 | None:intergenic |
CGAGGAGGAGGTATGTCAAT+TGG | 0.460852 | 6_4:-74265377 | None:intergenic |
TGAAACTTTATGGCCGTGGC+TGG | 0.464106 | 6_4:+74264960 | Msa0996280:CDS |
ACCTCTGTACTGTCTGCACT+TGG | 0.467315 | 6_4:+74265533 | Msa0996280:CDS |
GGTGGCAGTTGATATTGTTA+GGG | 0.470633 | 6_4:+74263108 | Msa0996280:intron |
TGGATGATCTTGAGAAGGTT+GGG | 0.471398 | 6_4:+74266312 | Msa0996280:CDS |
ATGAAGCAATGGAAGAAGGT+TGG | 0.472870 | 6_4:-74262713 | None:intergenic |
ATTGTTAGGGTGTTCTGGAT+TGG | 0.473286 | 6_4:+74263121 | Msa0996280:five_prime_UTR |
TGAATGTAGGATCAAGTTCA+AGG | 0.473815 | 6_4:+74264441 | Msa0996280:intron |
ATGCTCACTTGAGCTCCATC+AGG | 0.474418 | 6_4:-74266389 | None:intergenic |
GAAGATAATAGCAAGAGAAG+AGG | 0.482480 | 6_4:+74266553 | Msa0996280:CDS |
CGGAAACAACCTTGCTCCCA+AGG | 0.482656 | 6_4:+74264554 | Msa0996280:CDS |
GGTGGAAAGCTGGAAGGCCT+TGG | 0.485291 | 6_4:-74266478 | None:intergenic |
ATTTGCGAGGGTATGGATGA+AGG | 0.487003 | 6_4:-74265415 | None:intergenic |
CTCTGCAACTGACAGGTTAG+TGG | 0.488691 | 6_4:-74265492 | None:intergenic |
ATCTTCAAACAAGGCCTAAG+AGG | 0.488954 | 6_4:-74266536 | None:intergenic |
CAGTACAGAGGTAGGCGATT+GGG | 0.490395 | 6_4:-74265522 | None:intergenic |
TACTTGGTTGCAGGTTGTGC+GGG | 0.493357 | 6_4:+74265322 | Msa0996280:intron |
AGGGGTTTCCTCTTCGGCCG+AGG | 0.499231 | 6_4:-74265395 | None:intergenic |
CATGGCATGAGGTGGAAAGC+TGG | 0.502566 | 6_4:-74266488 | None:intergenic |
CGTGGCTGGCGTCAAATTGA+AGG | 0.507871 | 6_4:+74264974 | Msa0996280:CDS |
CAAGCTGACCGGGTGAATCT+CGG | 0.508422 | 6_4:-74265627 | None:intergenic |
TTTGGTCGAACACTCTCTAT+GGG | 0.514976 | 6_4:+74266224 | Msa0996280:CDS |
ATTTGCTACAATGGAGACTA+AGG | 0.515528 | 6_4:+74263150 | Msa0996280:exon |
TATCATACCATGGACATAAG+TGG | 0.516937 | 6_4:-74265749 | None:intergenic |
CAACAGGCGACAAGCTGACC+GGG | 0.523649 | 6_4:-74265637 | None:intergenic |
CCATCTGAGGAGGAAGAGAA+AGG | 0.527813 | 6_4:+74265689 | Msa0996280:CDS |
TCAACAGGCGACAAGCTGAC+CGG | 0.528816 | 6_4:-74265638 | None:intergenic |
TGTCGTTCTCTGCAACTGAC+AGG | 0.529046 | 6_4:-74265499 | None:intergenic |
TTAAGAATTTGATGATTGCA+TGG | 0.529235 | 6_4:-74266506 | None:intergenic |
ATGGATGATCTTGAGAAGGT+TGG | 0.536503 | 6_4:+74266311 | Msa0996280:CDS |
CTCAAAACCACTTATGTCCA+TGG | 0.537292 | 6_4:+74265742 | Msa0996280:CDS |
GCTTTGAAACTTTATGGCCG+TGG | 0.537498 | 6_4:+74264956 | Msa0996280:CDS |
GCAAGGTTGTTTCCGACAGA+AGG | 0.537798 | 6_4:-74264546 | None:intergenic |
TTGCGAGGGTATGGATGAAG+GGG | 0.537852 | 6_4:-74265413 | None:intergenic |
TTTGCGAGGGTATGGATGAA+GGG | 0.538270 | 6_4:-74265414 | None:intergenic |
GTCCTTAAGAAATCTGGAAG+AGG | 0.539236 | 6_4:+74266692 | Msa0996280:CDS |
TGGCTCTGAATTTGCTACAA+TGG | 0.539722 | 6_4:+74263141 | Msa0996280:exon |
GTATACCATCACTAAACAAA+GGG | 0.540490 | 6_4:+74264895 | Msa0996280:CDS |
GTAAAACAACCTTGGGAGCA+AGG | 0.542630 | 6_4:-74264563 | None:intergenic |
AGAAAGAGAGAATGAAGCAA+TGG | 0.542681 | 6_4:-74262724 | None:intergenic |
GCAATGGAAGAAGGTTGGGT+TGG | 0.545304 | 6_4:-74262708 | None:intergenic |
CTACTTGGTTGCAGGTTGTG+CGG | 0.547281 | 6_4:+74265321 | Msa0996280:intron |
CTTGCTATTATCTTCAAACA+AGG | 0.551156 | 6_4:-74266545 | None:intergenic |
AAACAAGGCCTAAGAGGCAC+AGG | 0.552171 | 6_4:-74266530 | None:intergenic |
CTAGGCATGTGTACACCTGA+TGG | 0.552985 | 6_4:+74266374 | Msa0996280:CDS |
GGTTTCCTCTTCGGCCGAGG+AGG | 0.557391 | 6_4:-74265392 | None:intergenic |
AAATCAGTTGACTCTTTCAA+AGG | 0.561001 | 6_4:+74265434 | Msa0996280:CDS |
TCCTTAAGAAATCTGGAAGA+GGG | 0.563781 | 6_4:+74266693 | Msa0996280:CDS |
TGAAAATGATGCGAAGTCGC+AGG | 0.563849 | 6_4:+74264518 | Msa0996280:CDS |
CTTCAATTTGACGCCAGCCA+CGG | 0.571186 | 6_4:-74264973 | None:intergenic |
GAAGAGGAAAGCTCTTGCAC+TGG | 0.577825 | 6_4:+74266569 | Msa0996280:CDS |
TACCTCCTCCTCGGCCGAAG+AGG | 0.581749 | 6_4:+74265387 | Msa0996280:CDS |
CGTATACCATCACTAAACAA+AGG | 0.584691 | 6_4:+74264894 | Msa0996280:CDS |
TGGAGCTCAAGTGAGCATCA+TGG | 0.586943 | 6_4:+74266394 | Msa0996280:CDS |
GGGTTCTCAGAAGTCAATGA+AGG | 0.589070 | 6_4:+74266244 | Msa0996280:CDS |
TTGACTCAGCTGAAATTACA+AGG | 0.593188 | 6_4:+74262847 | Msa0996280:five_prime_UTR |
CCAGACATCCAAACCATCTG+AGG | 0.593425 | 6_4:+74265676 | Msa0996280:CDS |
ACTGTGATCCACCTTTGGAA+TGG | 0.594883 | 6_4:-74264494 | None:intergenic |
TGTTGGCTTGGAAGAAAGAG+AGG | 0.597990 | 6_4:+74266766 | Msa0996280:CDS |
CAGGTTGTGCGGGAACCTGA+TGG | 0.598426 | 6_4:+74265332 | Msa0996280:intron |
ATCGCAGACTGATTCAGTGT+TGG | 0.599037 | 6_4:-74266594 | None:intergenic |
TTGCACCACCGAGATTCACC+CGG | 0.599354 | 6_4:+74265619 | Msa0996280:CDS |
AGTGCGCAACTTTACCATTG+TGG | 0.600355 | 6_4:+74266447 | Msa0996280:CDS |
CTTGATACAGAATTATCACT+AGG | 0.603577 | 6_4:+74266356 | Msa0996280:CDS |
AGTAAGTGCCATTCCAAAGG+TGG | 0.606494 | 6_4:+74264486 | Msa0996280:CDS |
GAGCATCATGGAACAACAGA+AGG | 0.607887 | 6_4:+74266406 | Msa0996280:CDS |
GCAACTGACAGGTTAGTGGA+TGG | 0.608909 | 6_4:-74265488 | None:intergenic |
GCATGAGGTGGAAAGCTGGA+AGG | 0.615795 | 6_4:-74266484 | None:intergenic |
CATAAAGTTTCAAAGCCTCA+AGG | 0.622366 | 6_4:-74264949 | None:intergenic |
GATGATTGCATGGCATGAGG+TGG | 0.625757 | 6_4:-74266496 | None:intergenic |
AAGAGTCAACTGATTTGCGA+GGG | 0.626425 | 6_4:-74265427 | None:intergenic |
GGTAGTAAGTGCCATTCCAA+AGG | 0.631426 | 6_4:+74264483 | Msa0996280:CDS |
CACTGAATCAGTCTGCGATG+TGG | 0.632503 | 6_4:+74266598 | Msa0996280:CDS |
TCGCAGGATATACCTTCTGT+CGG | 0.637342 | 6_4:+74264534 | Msa0996280:CDS |
AGTGCAGACAGTACAGAGGT+AGG | 0.637534 | 6_4:-74265530 | None:intergenic |
AAAGAGTCAACTGATTTGCG+AGG | 0.637562 | 6_4:-74265428 | None:intergenic |
GACATCCAAACCATCTGAGG+AGG | 0.638275 | 6_4:+74265679 | Msa0996280:CDS |
CAGAAGGAGAATCCATATGT+CGG | 0.647729 | 6_4:+74266422 | Msa0996280:CDS |
GTTGGCTTGGAAGAAAGAGA+GGG | 0.654387 | 6_4:+74266767 | Msa0996280:CDS |
CAATTGACATACCTCCTCCT+CGG | 0.655187 | 6_4:+74265378 | Msa0996280:CDS |
TGAAATGGATGATCTTGAGA+AGG | 0.659901 | 6_4:+74266307 | Msa0996280:CDS |
TTTGATGATTGCATGGCATG+AGG | 0.660991 | 6_4:-74266499 | None:intergenic |
ACCAAGTGCAGACAGTACAG+AGG | 0.666189 | 6_4:-74265534 | None:intergenic |
CCATTGTGGAGTTTGTACCA+AGG | 0.677183 | 6_4:+74266461 | Msa0996280:CDS |
AGAGCATCAAAAGTTCCTTG+AGG | 0.696601 | 6_4:+74264934 | Msa0996280:CDS |
CCTTGGTACAAACTCCACAA+TGG | 0.705024 | 6_4:-74266461 | None:intergenic |
GCTGACCGGGTGAATCTCGG+TGG | 0.721988 | 6_4:-74265624 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAAAGAAAATGAAAAAAA+TGG | - | chr6_4:74262878-74262897 | None:intergenic | 10.0% |
!! | TAAAATTTCTTTACTAAATT+TGG | + | chr6_4:74264997-74265016 | Msa0996280:intron | 10.0% |
!! | TATAAAGAAAATGAAAAAAA+TGG | - | chr6_4:74262878-74262897 | None:intergenic | 10.0% |
!! | TAAAATTTCTTTACTAAATT+TGG | + | chr6_4:74264997-74265016 | Msa0996280:intron | 10.0% |
!!! | ATTTCAAAACAATTTTTGTT+TGG | + | chr6_4:74262908-74262927 | Msa0996280:intron | 15.0% |
!!! | ATAAAAAGGGTATTAAAAAA+AGG | - | chr6_4:74263205-74263224 | None:intergenic | 15.0% |
!! | TAAGATCAAAATCATAAAAA+GGG | - | chr6_4:74263218-74263237 | None:intergenic | 15.0% |
!! | TTAAGATCAAAATCATAAAA+AGG | - | chr6_4:74263219-74263238 | None:intergenic | 15.0% |
!!! | TAATCAAATAATCTTTTTTC+AGG | - | chr6_4:74263380-74263399 | None:intergenic | 15.0% |
!!! | ATTTTTGTTTGTACTTTTTA+AGG | + | chr6_4:74263491-74263510 | Msa0996280:intron | 15.0% |
!! | TAAAAAAGTTCTATAGAAAA+TGG | + | chr6_4:74263581-74263600 | Msa0996280:intron | 15.0% |
!!! | TCTGAAATAATAAATTGATA+TGG | + | chr6_4:74263640-74263659 | Msa0996280:intron | 15.0% |
!!! | TCTATAAATTAACCTTATTT+AGG | - | chr6_4:74263920-74263939 | None:intergenic | 15.0% |
!!! | ATTTCAAAACAATTTTTGTT+TGG | + | chr6_4:74262908-74262927 | Msa0996280:intron | 15.0% |
!!! | ATAAAAAGGGTATTAAAAAA+AGG | - | chr6_4:74263205-74263224 | None:intergenic | 15.0% |
!! | TAAGATCAAAATCATAAAAA+GGG | - | chr6_4:74263218-74263237 | None:intergenic | 15.0% |
!! | TTAAGATCAAAATCATAAAA+AGG | - | chr6_4:74263219-74263238 | None:intergenic | 15.0% |
!!! | TAATCAAATAATCTTTTTTC+AGG | - | chr6_4:74263380-74263399 | None:intergenic | 15.0% |
!!! | ATTTTTGTTTGTACTTTTTA+AGG | + | chr6_4:74263491-74263510 | Msa0996280:intron | 15.0% |
!! | TAAAAAAGTTCTATAGAAAA+TGG | + | chr6_4:74263581-74263600 | Msa0996280:intron | 15.0% |
!!! | TCTGAAATAATAAATTGATA+TGG | + | chr6_4:74263640-74263659 | Msa0996280:intron | 15.0% |
!!! | TCTATAAATTAACCTTATTT+AGG | - | chr6_4:74263920-74263939 | None:intergenic | 15.0% |
!! | AAAATTGAGACTTACAAAAT+CGG | + | chr6_4:74262824-74262843 | Msa0996280:five_prime_UTR | 20.0% |
!!! | TTGCATTTTCTTTAAAAAGT+AGG | + | chr6_4:74263241-74263260 | Msa0996280:intron | 20.0% |
!! | ATTTGATTATATATGAGACT+AGG | + | chr6_4:74263391-74263410 | Msa0996280:intron | 20.0% |
!! | TTTGATTATATATGAGACTA+GGG | + | chr6_4:74263392-74263411 | Msa0996280:intron | 20.0% |
!!! | TAGTTGAGTCATAATTTTAT+CGG | + | chr6_4:74263663-74263682 | Msa0996280:intron | 20.0% |
!!! | TCAATTTTTTGTTATCGAAA+CGG | + | chr6_4:74264395-74264414 | Msa0996280:intron | 20.0% |
!! | TGAAAATTGAAATAAGTTTC+AGG | - | chr6_4:74264860-74264879 | None:intergenic | 20.0% |
!!! | AACTTATTTCAATTTTCAAC+AGG | + | chr6_4:74264862-74264881 | Msa0996280:intron | 20.0% |
!!! | TGTAGATTTGGATTTTTAAT+TGG | + | chr6_4:74265208-74265227 | Msa0996280:intron | 20.0% |
!!! | GATTTTTAATTGGACTTTAA+AGG | + | chr6_4:74265218-74265237 | Msa0996280:intron | 20.0% |
!!! | AAATTCTTTGATTTAGCTTA+TGG | + | chr6_4:74265781-74265800 | Msa0996280:intron | 20.0% |
!!! | AATAATTTATGACACTGTTT+TGG | + | chr6_4:74265876-74265895 | Msa0996280:intron | 20.0% |
!! | AGATAATTTCAAAACTAGTA+AGG | - | chr6_4:74266107-74266126 | None:intergenic | 20.0% |
!! | GATGAAAATTCTTTAATTGT+TGG | + | chr6_4:74266749-74266768 | Msa0996280:CDS | 20.0% |
!! | AAAATTGAGACTTACAAAAT+CGG | + | chr6_4:74262824-74262843 | Msa0996280:five_prime_UTR | 20.0% |
!!! | TTGCATTTTCTTTAAAAAGT+AGG | + | chr6_4:74263241-74263260 | Msa0996280:intron | 20.0% |
!! | ATTTGATTATATATGAGACT+AGG | + | chr6_4:74263391-74263410 | Msa0996280:intron | 20.0% |
!! | TTTGATTATATATGAGACTA+GGG | + | chr6_4:74263392-74263411 | Msa0996280:intron | 20.0% |
!!! | TAGTTGAGTCATAATTTTAT+CGG | + | chr6_4:74263663-74263682 | Msa0996280:intron | 20.0% |
!!! | TCAATTTTTTGTTATCGAAA+CGG | + | chr6_4:74264395-74264414 | Msa0996280:intron | 20.0% |
!! | TGAAAATTGAAATAAGTTTC+AGG | - | chr6_4:74264860-74264879 | None:intergenic | 20.0% |
!!! | AACTTATTTCAATTTTCAAC+AGG | + | chr6_4:74264862-74264881 | Msa0996280:intron | 20.0% |
!!! | TGTAGATTTGGATTTTTAAT+TGG | + | chr6_4:74265208-74265227 | Msa0996280:intron | 20.0% |
!!! | GATTTTTAATTGGACTTTAA+AGG | + | chr6_4:74265218-74265237 | Msa0996280:intron | 20.0% |
!!! | AAATTCTTTGATTTAGCTTA+TGG | + | chr6_4:74265781-74265800 | Msa0996280:intron | 20.0% |
!!! | AATAATTTATGACACTGTTT+TGG | + | chr6_4:74265876-74265895 | Msa0996280:intron | 20.0% |
!! | AGATAATTTCAAAACTAGTA+AGG | - | chr6_4:74266107-74266126 | None:intergenic | 20.0% |
!! | GATGAAAATTCTTTAATTGT+TGG | + | chr6_4:74266749-74266768 | Msa0996280:CDS | 20.0% |
!! | TTGATATGTGATCTTTCTTT+TGG | + | chr6_4:74263073-74263092 | Msa0996280:intron | 25.0% |
!! | CTCAACAAAAATATCTTTTC+AGG | + | chr6_4:74263286-74263305 | Msa0996280:intron | 25.0% |
! | GATTAAATAACTGATGTATC+TGG | + | chr6_4:74263315-74263334 | Msa0996280:intron | 25.0% |
!!! | TAGAGTATTTTAGTTCCATA+GGG | + | chr6_4:74263554-74263573 | Msa0996280:intron | 25.0% |
! | AAGTTCTATAGAAAATGGAT+TGG | + | chr6_4:74263586-74263605 | Msa0996280:intron | 25.0% |
! | AAACCAAAAGATAAAGACAA+GGG | - | chr6_4:74264376-74264395 | None:intergenic | 25.0% |
! | TACAAAATGTTGTCAAATAG+TGG | + | chr6_4:74264725-74264744 | Msa0996280:intron | 25.0% |
! | TTATATCTAACTAGAAGACA+TGG | - | chr6_4:74265050-74265069 | None:intergenic | 25.0% |
! | GAAGGTTATAAATGTAGATT+TGG | + | chr6_4:74265196-74265215 | Msa0996280:intron | 25.0% |
!! | TTAATTGGACTTTAAAGGAA+AGG | + | chr6_4:74265223-74265242 | Msa0996280:intron | 25.0% |
! | TCAAATATGCTAATTCATAC+AGG | - | chr6_4:74265840-74265859 | None:intergenic | 25.0% |
! | CATATTTGAGCTTATTTACT+AGG | + | chr6_4:74265851-74265870 | Msa0996280:intron | 25.0% |
!! | TTAAGAATTTGATGATTGCA+TGG | - | chr6_4:74266509-74266528 | None:intergenic | 25.0% |
!! | TCAGCTAAACATCTTTTATA+TGG | - | chr6_4:74266725-74266744 | None:intergenic | 25.0% |
!! | AAATTCTTTAATTGTTGGCT+TGG | + | chr6_4:74266754-74266773 | Msa0996280:CDS | 25.0% |
!! | TTGATATGTGATCTTTCTTT+TGG | + | chr6_4:74263073-74263092 | Msa0996280:intron | 25.0% |
!! | CTCAACAAAAATATCTTTTC+AGG | + | chr6_4:74263286-74263305 | Msa0996280:intron | 25.0% |
! | GATTAAATAACTGATGTATC+TGG | + | chr6_4:74263315-74263334 | Msa0996280:intron | 25.0% |
!!! | TAGAGTATTTTAGTTCCATA+GGG | + | chr6_4:74263554-74263573 | Msa0996280:intron | 25.0% |
! | AAGTTCTATAGAAAATGGAT+TGG | + | chr6_4:74263586-74263605 | Msa0996280:intron | 25.0% |
! | AAACCAAAAGATAAAGACAA+GGG | - | chr6_4:74264376-74264395 | None:intergenic | 25.0% |
! | TACAAAATGTTGTCAAATAG+TGG | + | chr6_4:74264725-74264744 | Msa0996280:intron | 25.0% |
! | TTATATCTAACTAGAAGACA+TGG | - | chr6_4:74265050-74265069 | None:intergenic | 25.0% |
! | GAAGGTTATAAATGTAGATT+TGG | + | chr6_4:74265196-74265215 | Msa0996280:intron | 25.0% |
!! | TTAATTGGACTTTAAAGGAA+AGG | + | chr6_4:74265223-74265242 | Msa0996280:intron | 25.0% |
! | TCAAATATGCTAATTCATAC+AGG | - | chr6_4:74265840-74265859 | None:intergenic | 25.0% |
! | CATATTTGAGCTTATTTACT+AGG | + | chr6_4:74265851-74265870 | Msa0996280:intron | 25.0% |
!! | TTAAGAATTTGATGATTGCA+TGG | - | chr6_4:74266509-74266528 | None:intergenic | 25.0% |
!! | TCAGCTAAACATCTTTTATA+TGG | - | chr6_4:74266725-74266744 | None:intergenic | 25.0% |
!! | AAATTCTTTAATTGTTGGCT+TGG | + | chr6_4:74266754-74266773 | Msa0996280:CDS | 25.0% |
! | GATTGATCTGATTTGTGAAA+TGG | + | chr6_4:74262956-74262975 | Msa0996280:intron | 30.0% |
ATGTATCTGGTTGTCTATAA+CGG | + | chr6_4:74263328-74263347 | Msa0996280:intron | 30.0% | |
!!! | CTAGAGTATTTTAGTTCCAT+AGG | + | chr6_4:74263553-74263572 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGTTTTTAAAACAT+CGG | - | chr6_4:74263795-74263814 | None:intergenic | 30.0% |
GTTCAATTGTTTGAATCTTC+TGG | + | chr6_4:74263775-74263794 | Msa0996280:intron | 30.0% | |
! | ATTGTTTGAATCTTCTGGTT+CGG | + | chr6_4:74263780-74263799 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGTTTTTAAAACAT+TGG | + | chr6_4:74263795-74263814 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGATTTTAAAACAT+TGG | + | chr6_4:74263844-74263863 | Msa0996280:intron | 30.0% |
TACATGAAAACTATCAACTG+AGG | - | chr6_4:74264042-74264061 | None:intergenic | 30.0% | |
! | CTGAAGTATCACTGAATATT+TGG | + | chr6_4:74264088-74264107 | Msa0996280:intron | 30.0% |
GTTAGTATGTGAGATTTGAA+CGG | + | chr6_4:74264135-74264154 | Msa0996280:intron | 30.0% | |
TTAGTATGTGAGATTTGAAC+GGG | + | chr6_4:74264136-74264155 | Msa0996280:intron | 30.0% | |
AAAAGAGGAAAAAAAGTCTC+CGG | - | chr6_4:74264248-74264267 | None:intergenic | 30.0% | |
! | TCCTCTTTTCATAGTAAAAG+AGG | + | chr6_4:74264259-74264278 | Msa0996280:intron | 30.0% |
! | CCTCTTTTCATAGTAAAAGA+GGG | + | chr6_4:74264260-74264279 | Msa0996280:intron | 30.0% |
AAAGATAAAGACAAGGGATT+GGG | - | chr6_4:74264370-74264389 | None:intergenic | 30.0% | |
AAAAGATAAAGACAAGGGAT+TGG | - | chr6_4:74264371-74264390 | None:intergenic | 30.0% | |
! | AATCCCTTGTCTTTATCTTT+TGG | + | chr6_4:74264370-74264389 | Msa0996280:intron | 30.0% |
GAAACCAAAAGATAAAGACA+AGG | - | chr6_4:74264377-74264396 | None:intergenic | 30.0% | |
!!! | CATTAGCTACTTTTGAATGT+AGG | + | chr6_4:74264428-74264447 | Msa0996280:intron | 30.0% |
GTTGAAAGTAAAACAACCTT+GGG | - | chr6_4:74264573-74264592 | None:intergenic | 30.0% | |
TGTTGAAAGTAAAACAACCT+TGG | - | chr6_4:74264574-74264593 | None:intergenic | 30.0% | |
TTGTCAAATAGTGGCTATAA+CGG | + | chr6_4:74264734-74264753 | Msa0996280:intron | 30.0% | |
GTGTTGTCAATAGCAAATTA+CGG | - | chr6_4:74264806-74264825 | None:intergenic | 30.0% | |
! | ATTTCAATTTTCAACAGGTC+AGG | + | chr6_4:74264867-74264886 | Msa0996280:intron | 30.0% |
! | CTTTGTTTAGTGATGGTATA+CGG | - | chr6_4:74264896-74264915 | None:intergenic | 30.0% |
GTATACCATCACTAAACAAA+GGG | + | chr6_4:74264895-74264914 | Msa0996280:CDS | 30.0% | |
AATCTTCATGCAGAACATAT+AGG | + | chr6_4:74265079-74265098 | Msa0996280:intron | 30.0% | |
ATCTTCATGCAGAACATATA+GGG | + | chr6_4:74265080-74265099 | Msa0996280:intron | 30.0% | |
! | TAGAGAAAAACTTTTGAGCA+TGG | - | chr6_4:74265132-74265151 | None:intergenic | 30.0% |
! | TGCTCAAAAGTTTTTCTCTA+AGG | + | chr6_4:74265132-74265151 | Msa0996280:CDS | 30.0% |
TAATTATTGCTCGCAAATGA+AGG | + | chr6_4:74265178-74265197 | Msa0996280:intron | 30.0% | |
CCAAGTAGATATTAAGATCA+TGG | - | chr6_4:74265309-74265328 | None:intergenic | 30.0% | |
CCATGATCTTAATATCTACT+TGG | + | chr6_4:74265306-74265325 | Msa0996280:intron | 30.0% | |
! | AAATCAGTTGACTCTTTCAA+AGG | + | chr6_4:74265434-74265453 | Msa0996280:CDS | 30.0% |
! | TGATTTAGCTTATGGTTCAT+AGG | + | chr6_4:74265789-74265808 | Msa0996280:intron | 30.0% |
! | GACTCATGCAAAAGATTTTA+GGG | + | chr6_4:74265814-74265833 | Msa0996280:intron | 30.0% |
ATTTCAAAACTAGTAAGGCA+TGG | - | chr6_4:74266102-74266121 | None:intergenic | 30.0% | |
TTCCTCAGAAGAAATAATCT+CGG | - | chr6_4:74266147-74266166 | None:intergenic | 30.0% | |
AGCTTAATACTAGTGATTTG+TGG | - | chr6_4:74266203-74266222 | None:intergenic | 30.0% | |
ATCACTAGTATTAAGCTGTT+TGG | + | chr6_4:74266206-74266225 | Msa0996280:intron | 30.0% | |
AGCTATCAACTCTAATGAAA+TGG | + | chr6_4:74266292-74266311 | Msa0996280:CDS | 30.0% | |
CTTGATACAGAATTATCACT+AGG | + | chr6_4:74266356-74266375 | Msa0996280:CDS | 30.0% | |
!! | CTTGCTATTATCTTCAAACA+AGG | - | chr6_4:74266548-74266567 | None:intergenic | 30.0% |
! | GATTGATCTGATTTGTGAAA+TGG | + | chr6_4:74262956-74262975 | Msa0996280:intron | 30.0% |
ATGTATCTGGTTGTCTATAA+CGG | + | chr6_4:74263328-74263347 | Msa0996280:intron | 30.0% | |
!!! | CTAGAGTATTTTAGTTCCAT+AGG | + | chr6_4:74263553-74263572 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGTTTTTAAAACAT+CGG | - | chr6_4:74263795-74263814 | None:intergenic | 30.0% |
GTTCAATTGTTTGAATCTTC+TGG | + | chr6_4:74263775-74263794 | Msa0996280:intron | 30.0% | |
! | ATTGTTTGAATCTTCTGGTT+CGG | + | chr6_4:74263780-74263799 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGTTTTTAAAACAT+TGG | + | chr6_4:74263795-74263814 | Msa0996280:intron | 30.0% |
!!! | TGGTTCGGATTTTAAAACAT+TGG | + | chr6_4:74263844-74263863 | Msa0996280:intron | 30.0% |
TACATGAAAACTATCAACTG+AGG | - | chr6_4:74264042-74264061 | None:intergenic | 30.0% | |
! | CTGAAGTATCACTGAATATT+TGG | + | chr6_4:74264088-74264107 | Msa0996280:intron | 30.0% |
GTTAGTATGTGAGATTTGAA+CGG | + | chr6_4:74264135-74264154 | Msa0996280:intron | 30.0% | |
TTAGTATGTGAGATTTGAAC+GGG | + | chr6_4:74264136-74264155 | Msa0996280:intron | 30.0% | |
AAAAGAGGAAAAAAAGTCTC+CGG | - | chr6_4:74264248-74264267 | None:intergenic | 30.0% | |
! | TCCTCTTTTCATAGTAAAAG+AGG | + | chr6_4:74264259-74264278 | Msa0996280:intron | 30.0% |
! | CCTCTTTTCATAGTAAAAGA+GGG | + | chr6_4:74264260-74264279 | Msa0996280:intron | 30.0% |
AAAGATAAAGACAAGGGATT+GGG | - | chr6_4:74264370-74264389 | None:intergenic | 30.0% | |
AAAAGATAAAGACAAGGGAT+TGG | - | chr6_4:74264371-74264390 | None:intergenic | 30.0% | |
! | AATCCCTTGTCTTTATCTTT+TGG | + | chr6_4:74264370-74264389 | Msa0996280:intron | 30.0% |
GAAACCAAAAGATAAAGACA+AGG | - | chr6_4:74264377-74264396 | None:intergenic | 30.0% | |
!!! | CATTAGCTACTTTTGAATGT+AGG | + | chr6_4:74264428-74264447 | Msa0996280:intron | 30.0% |
GTTGAAAGTAAAACAACCTT+GGG | - | chr6_4:74264573-74264592 | None:intergenic | 30.0% | |
TGTTGAAAGTAAAACAACCT+TGG | - | chr6_4:74264574-74264593 | None:intergenic | 30.0% | |
TTGTCAAATAGTGGCTATAA+CGG | + | chr6_4:74264734-74264753 | Msa0996280:intron | 30.0% | |
GTGTTGTCAATAGCAAATTA+CGG | - | chr6_4:74264806-74264825 | None:intergenic | 30.0% | |
! | ATTTCAATTTTCAACAGGTC+AGG | + | chr6_4:74264867-74264886 | Msa0996280:intron | 30.0% |
! | CTTTGTTTAGTGATGGTATA+CGG | - | chr6_4:74264896-74264915 | None:intergenic | 30.0% |
GTATACCATCACTAAACAAA+GGG | + | chr6_4:74264895-74264914 | Msa0996280:CDS | 30.0% | |
AATCTTCATGCAGAACATAT+AGG | + | chr6_4:74265079-74265098 | Msa0996280:intron | 30.0% | |
ATCTTCATGCAGAACATATA+GGG | + | chr6_4:74265080-74265099 | Msa0996280:intron | 30.0% | |
! | TAGAGAAAAACTTTTGAGCA+TGG | - | chr6_4:74265132-74265151 | None:intergenic | 30.0% |
! | TGCTCAAAAGTTTTTCTCTA+AGG | + | chr6_4:74265132-74265151 | Msa0996280:CDS | 30.0% |
TAATTATTGCTCGCAAATGA+AGG | + | chr6_4:74265178-74265197 | Msa0996280:intron | 30.0% | |
CCAAGTAGATATTAAGATCA+TGG | - | chr6_4:74265309-74265328 | None:intergenic | 30.0% | |
CCATGATCTTAATATCTACT+TGG | + | chr6_4:74265306-74265325 | Msa0996280:intron | 30.0% | |
! | AAATCAGTTGACTCTTTCAA+AGG | + | chr6_4:74265434-74265453 | Msa0996280:CDS | 30.0% |
! | TGATTTAGCTTATGGTTCAT+AGG | + | chr6_4:74265789-74265808 | Msa0996280:intron | 30.0% |
! | GACTCATGCAAAAGATTTTA+GGG | + | chr6_4:74265814-74265833 | Msa0996280:intron | 30.0% |
ATTTCAAAACTAGTAAGGCA+TGG | - | chr6_4:74266102-74266121 | None:intergenic | 30.0% | |
TTCCTCAGAAGAAATAATCT+CGG | - | chr6_4:74266147-74266166 | None:intergenic | 30.0% | |
AGCTTAATACTAGTGATTTG+TGG | - | chr6_4:74266203-74266222 | None:intergenic | 30.0% | |
ATCACTAGTATTAAGCTGTT+TGG | + | chr6_4:74266206-74266225 | Msa0996280:intron | 30.0% | |
AGCTATCAACTCTAATGAAA+TGG | + | chr6_4:74266292-74266311 | Msa0996280:CDS | 30.0% | |
CTTGATACAGAATTATCACT+AGG | + | chr6_4:74266356-74266375 | Msa0996280:CDS | 30.0% | |
!! | CTTGCTATTATCTTCAAACA+AGG | - | chr6_4:74266548-74266567 | None:intergenic | 30.0% |
AGAAAGAGAGAATGAAGCAA+TGG | - | chr6_4:74262727-74262746 | None:intergenic | 35.0% | |
TTCTCTCCAAATTCATCTTC+TGG | + | chr6_4:74262743-74262762 | Msa0996280:five_prime_UTR | 35.0% | |
TCTCTCCAAATTCATCTTCT+GGG | + | chr6_4:74262744-74262763 | Msa0996280:five_prime_UTR | 35.0% | |
TTGACTCAGCTGAAATTACA+AGG | + | chr6_4:74262847-74262866 | Msa0996280:five_prime_UTR | 35.0% | |
!!! | TTCTTTTGGTGTTGCTTGAT+TGG | + | chr6_4:74263087-74263106 | Msa0996280:intron | 35.0% |
! | TTGATATTGTTAGGGTGTTC+TGG | + | chr6_4:74263116-74263135 | Msa0996280:five_prime_UTR | 35.0% |
! | ATTTGCTACAATGGAGACTA+AGG | + | chr6_4:74263150-74263169 | Msa0996280:exon | 35.0% |
TATATATGAGACTAGGGAGT+AGG | + | chr6_4:74263398-74263417 | Msa0996280:intron | 35.0% | |
ATATATGAGACTAGGGAGTA+GGG | + | chr6_4:74263399-74263418 | Msa0996280:intron | 35.0% | |
!!! | GAACTTTTTTAGCTTCCCTA+TGG | - | chr6_4:74263572-74263591 | None:intergenic | 35.0% |
CATGAAATCATCCTAGACTT+TGG | + | chr6_4:74263728-74263747 | Msa0996280:intron | 35.0% | |
GTTGAAATTGTTGCATCATC+TGG | + | chr6_4:74263824-74263843 | Msa0996280:intron | 35.0% | |
AATTGTTGCATCATCTGGTT+CGG | + | chr6_4:74263829-74263848 | Msa0996280:intron | 35.0% | |
! | GCAAAGTGCTTACCTAAATA+AGG | + | chr6_4:74263905-74263924 | Msa0996280:intron | 35.0% |
! | CCCTCTTTTACTATGAAAAG+AGG | - | chr6_4:74264263-74264282 | None:intergenic | 35.0% |
TGAATGTAGGATCAAGTTCA+AGG | + | chr6_4:74264441-74264460 | Msa0996280:intron | 35.0% | |
AAAATACCGCTATAGCATAG+TGG | + | chr6_4:74264665-74264684 | Msa0996280:intron | 35.0% | |
CAAATTCCACTATGCTATAG+CGG | - | chr6_4:74264674-74264693 | None:intergenic | 35.0% | |
TAGCAAATTACGGAAAACAG+TGG | - | chr6_4:74264796-74264815 | None:intergenic | 35.0% | |
CGTATACCATCACTAAACAA+AGG | + | chr6_4:74264894-74264913 | Msa0996280:CDS | 35.0% | |
! | TTTCTCCCTTTGTTTAGTGA+TGG | - | chr6_4:74264903-74264922 | None:intergenic | 35.0% |
TCACTAAACAAAGGGAGAAA+TGG | + | chr6_4:74264903-74264922 | Msa0996280:CDS | 35.0% | |
! | GAACTTTTGATGCTCTTCAT+CGG | - | chr6_4:74264930-74264949 | None:intergenic | 35.0% |
CATAAAGTTTCAAAGCCTCA+AGG | - | chr6_4:74264952-74264971 | None:intergenic | 35.0% | |
!! | CTTGAGGCTTTGAAACTTTA+TGG | + | chr6_4:74264950-74264969 | Msa0996280:CDS | 35.0% |
TGTTCTGCATGAAGATTAAG+AGG | - | chr6_4:74265076-74265095 | None:intergenic | 35.0% | |
! | GGACTTTAAAGGAAAGGATT+TGG | + | chr6_4:74265229-74265248 | Msa0996280:intron | 35.0% |
CTTAATATCTACTTGGTTGC+AGG | + | chr6_4:74265313-74265332 | Msa0996280:intron | 35.0% | |
! | CAATCATTCTCCTTTTCAAC+AGG | - | chr6_4:74265656-74265675 | None:intergenic | 35.0% |
TATCATACCATGGACATAAG+TGG | - | chr6_4:74265752-74265771 | None:intergenic | 35.0% | |
TCAAGCAGTTTATCATACCA+TGG | - | chr6_4:74265762-74265781 | None:intergenic | 35.0% | |
! | TTTAGCTTATGGTTCATAGG+AGG | + | chr6_4:74265792-74265811 | Msa0996280:intron | 35.0% |
! | GGACTCATGCAAAAGATTTT+AGG | + | chr6_4:74265813-74265832 | Msa0996280:intron | 35.0% |
AAAACTAGTAAGGCATGGTT+TGG | - | chr6_4:74266097-74266116 | None:intergenic | 35.0% | |
CATATTTGCAGCATCTTCTT+TGG | - | chr6_4:74266180-74266199 | None:intergenic | 35.0% | |
TGAAATGGATGATCTTGAGA+AGG | + | chr6_4:74266307-74266326 | Msa0996280:CDS | 35.0% | |
GAAGATAATAGCAAGAGAAG+AGG | + | chr6_4:74266553-74266572 | Msa0996280:CDS | 35.0% | |
TCAAACTCAAAAACATCGTC+AGG | + | chr6_4:74266661-74266680 | Msa0996280:CDS | 35.0% | |
TCCTTAAGAAATCTGGAAGA+GGG | + | chr6_4:74266693-74266712 | Msa0996280:CDS | 35.0% | |
AGAAAGAGAGAATGAAGCAA+TGG | - | chr6_4:74262727-74262746 | None:intergenic | 35.0% | |
TTCTCTCCAAATTCATCTTC+TGG | + | chr6_4:74262743-74262762 | Msa0996280:five_prime_UTR | 35.0% | |
TCTCTCCAAATTCATCTTCT+GGG | + | chr6_4:74262744-74262763 | Msa0996280:five_prime_UTR | 35.0% | |
TTGACTCAGCTGAAATTACA+AGG | + | chr6_4:74262847-74262866 | Msa0996280:five_prime_UTR | 35.0% | |
!!! | TTCTTTTGGTGTTGCTTGAT+TGG | + | chr6_4:74263087-74263106 | Msa0996280:intron | 35.0% |
! | TTGATATTGTTAGGGTGTTC+TGG | + | chr6_4:74263116-74263135 | Msa0996280:five_prime_UTR | 35.0% |
! | ATTTGCTACAATGGAGACTA+AGG | + | chr6_4:74263150-74263169 | Msa0996280:exon | 35.0% |
TATATATGAGACTAGGGAGT+AGG | + | chr6_4:74263398-74263417 | Msa0996280:intron | 35.0% | |
ATATATGAGACTAGGGAGTA+GGG | + | chr6_4:74263399-74263418 | Msa0996280:intron | 35.0% | |
!!! | GAACTTTTTTAGCTTCCCTA+TGG | - | chr6_4:74263572-74263591 | None:intergenic | 35.0% |
CATGAAATCATCCTAGACTT+TGG | + | chr6_4:74263728-74263747 | Msa0996280:intron | 35.0% | |
GTTGAAATTGTTGCATCATC+TGG | + | chr6_4:74263824-74263843 | Msa0996280:intron | 35.0% | |
AATTGTTGCATCATCTGGTT+CGG | + | chr6_4:74263829-74263848 | Msa0996280:intron | 35.0% | |
! | GCAAAGTGCTTACCTAAATA+AGG | + | chr6_4:74263905-74263924 | Msa0996280:intron | 35.0% |
! | CCCTCTTTTACTATGAAAAG+AGG | - | chr6_4:74264263-74264282 | None:intergenic | 35.0% |
TGAATGTAGGATCAAGTTCA+AGG | + | chr6_4:74264441-74264460 | Msa0996280:intron | 35.0% | |
AAAATACCGCTATAGCATAG+TGG | + | chr6_4:74264665-74264684 | Msa0996280:intron | 35.0% | |
CAAATTCCACTATGCTATAG+CGG | - | chr6_4:74264674-74264693 | None:intergenic | 35.0% | |
TAGCAAATTACGGAAAACAG+TGG | - | chr6_4:74264796-74264815 | None:intergenic | 35.0% | |
CGTATACCATCACTAAACAA+AGG | + | chr6_4:74264894-74264913 | Msa0996280:CDS | 35.0% | |
! | TTTCTCCCTTTGTTTAGTGA+TGG | - | chr6_4:74264903-74264922 | None:intergenic | 35.0% |
TCACTAAACAAAGGGAGAAA+TGG | + | chr6_4:74264903-74264922 | Msa0996280:CDS | 35.0% | |
! | GAACTTTTGATGCTCTTCAT+CGG | - | chr6_4:74264930-74264949 | None:intergenic | 35.0% |
CATAAAGTTTCAAAGCCTCA+AGG | - | chr6_4:74264952-74264971 | None:intergenic | 35.0% | |
!! | CTTGAGGCTTTGAAACTTTA+TGG | + | chr6_4:74264950-74264969 | Msa0996280:CDS | 35.0% |
TGTTCTGCATGAAGATTAAG+AGG | - | chr6_4:74265076-74265095 | None:intergenic | 35.0% | |
! | GGACTTTAAAGGAAAGGATT+TGG | + | chr6_4:74265229-74265248 | Msa0996280:intron | 35.0% |
CTTAATATCTACTTGGTTGC+AGG | + | chr6_4:74265313-74265332 | Msa0996280:intron | 35.0% | |
! | CAATCATTCTCCTTTTCAAC+AGG | - | chr6_4:74265656-74265675 | None:intergenic | 35.0% |
TATCATACCATGGACATAAG+TGG | - | chr6_4:74265752-74265771 | None:intergenic | 35.0% | |
TCAAGCAGTTTATCATACCA+TGG | - | chr6_4:74265762-74265781 | None:intergenic | 35.0% | |
! | TTTAGCTTATGGTTCATAGG+AGG | + | chr6_4:74265792-74265811 | Msa0996280:intron | 35.0% |
! | GGACTCATGCAAAAGATTTT+AGG | + | chr6_4:74265813-74265832 | Msa0996280:intron | 35.0% |
AAAACTAGTAAGGCATGGTT+TGG | - | chr6_4:74266097-74266116 | None:intergenic | 35.0% | |
CATATTTGCAGCATCTTCTT+TGG | - | chr6_4:74266180-74266199 | None:intergenic | 35.0% | |
TGAAATGGATGATCTTGAGA+AGG | + | chr6_4:74266307-74266326 | Msa0996280:CDS | 35.0% | |
GAAGATAATAGCAAGAGAAG+AGG | + | chr6_4:74266553-74266572 | Msa0996280:CDS | 35.0% | |
TCAAACTCAAAAACATCGTC+AGG | + | chr6_4:74266661-74266680 | Msa0996280:CDS | 35.0% | |
TCCTTAAGAAATCTGGAAGA+GGG | + | chr6_4:74266693-74266712 | Msa0996280:CDS | 35.0% | |
TGAAGCAATGGAAGAAGGTT+GGG | - | chr6_4:74262715-74262734 | None:intergenic | 40.0% | |
ATGAAGCAATGGAAGAAGGT+TGG | - | chr6_4:74262716-74262735 | None:intergenic | 40.0% | |
GAGAATGAAGCAATGGAAGA+AGG | - | chr6_4:74262720-74262739 | None:intergenic | 40.0% | |
AGTGACCCAGAAGATGAATT+TGG | - | chr6_4:74262752-74262771 | None:intergenic | 40.0% | |
!!! | TTTTGGTGTTGCTTGATTGG+TGG | + | chr6_4:74263090-74263109 | Msa0996280:intron | 40.0% |
! | TGGTGGCAGTTGATATTGTT+AGG | + | chr6_4:74263107-74263126 | Msa0996280:intron | 40.0% |
! | GGTGGCAGTTGATATTGTTA+GGG | + | chr6_4:74263108-74263127 | Msa0996280:intron | 40.0% |
! | ATTGTTAGGGTGTTCTGGAT+TGG | + | chr6_4:74263121-74263140 | Msa0996280:five_prime_UTR | 40.0% |
!! | TGGCTCTGAATTTGCTACAA+TGG | + | chr6_4:74263141-74263160 | Msa0996280:exon | 40.0% |
TATATGAGACTAGGGAGTAG+GGG | + | chr6_4:74263400-74263419 | Msa0996280:intron | 40.0% | |
GGATGATTTCATGTCTGGTT+CGG | - | chr6_4:74263721-74263740 | None:intergenic | 40.0% | |
! | GTCTAGGATGATTTCATGTC+TGG | - | chr6_4:74263726-74263745 | None:intergenic | 40.0% |
! | CATGGTTCAACTGCTTTGAA+AGG | + | chr6_4:74263753-74263772 | Msa0996280:intron | 40.0% |
TATGTGAGATTTGAACGGGA+CGG | + | chr6_4:74264140-74264159 | Msa0996280:intron | 40.0% | |
CTATTTAACATGCTGCTGCT+TGG | + | chr6_4:74264178-74264197 | Msa0996280:intron | 40.0% | |
GTGGAGGATTGAATGTAAGA+TGG | - | chr6_4:74264221-74264240 | None:intergenic | 40.0% | |
AAAAAAAGTCTCCGGAAGAG+TGG | - | chr6_4:74264240-74264259 | None:intergenic | 40.0% | |
TTGCTATACAGTCGCTATAG+CGG | + | chr6_4:74264620-74264639 | Msa0996280:intron | 40.0% | |
ACTACAGCACTGTTTCACAA+CGG | + | chr6_4:74264758-74264777 | Msa0996280:intron | 40.0% | |
! | AGAGCATCAAAAGTTCCTTG+AGG | + | chr6_4:74264934-74264953 | Msa0996280:CDS | 40.0% |
! | TCGAATCTGAACTGCAGTTT+TGG | - | chr6_4:74265107-74265126 | None:intergenic | 40.0% |
GGTATGTCAATTGGCTGAAT+AGG | - | chr6_4:74265371-74265390 | None:intergenic | 40.0% | |
!! | AAGAGTCAACTGATTTGCGA+GGG | - | chr6_4:74265430-74265449 | None:intergenic | 40.0% |
!! | AAAGAGTCAACTGATTTGCG+AGG | - | chr6_4:74265431-74265450 | None:intergenic | 40.0% |
!!! | GGTTTTGAGTTGGTGGATAA+AGG | - | chr6_4:74265731-74265750 | None:intergenic | 40.0% |
!!! | CATAAGTGGTTTTGAGTTGG+TGG | - | chr6_4:74265738-74265757 | None:intergenic | 40.0% |
!!! | GGACATAAGTGGTTTTGAGT+TGG | - | chr6_4:74265741-74265760 | None:intergenic | 40.0% |
CTCAAAACCACTTATGTCCA+TGG | + | chr6_4:74265742-74265761 | Msa0996280:CDS | 40.0% | |
! | GTCCGAGATTATTTCTTCTG+AGG | + | chr6_4:74266142-74266161 | Msa0996280:intron | 40.0% |
TTTGGTCGAACACTCTCTAT+GGG | + | chr6_4:74266224-74266243 | Msa0996280:CDS | 40.0% | |
ATGGATGATCTTGAGAAGGT+TGG | + | chr6_4:74266311-74266330 | Msa0996280:CDS | 40.0% | |
TGGATGATCTTGAGAAGGTT+GGG | + | chr6_4:74266312-74266331 | Msa0996280:CDS | 40.0% | |
CAGAAGGAGAATCCATATGT+CGG | + | chr6_4:74266422-74266441 | Msa0996280:CDS | 40.0% | |
! | TTTGATGATTGCATGGCATG+AGG | - | chr6_4:74266502-74266521 | None:intergenic | 40.0% |
TTCTTAATCCTGTGCCTCTT+AGG | + | chr6_4:74266522-74266541 | Msa0996280:CDS | 40.0% | |
ATCTTCAAACAAGGCCTAAG+AGG | - | chr6_4:74266539-74266558 | None:intergenic | 40.0% | |
ACTCAAAAACATCGTCAGGA+AGG | + | chr6_4:74266665-74266684 | Msa0996280:CDS | 40.0% | |
GGAGTTGTCCTTAAGAAATC+TGG | + | chr6_4:74266686-74266705 | Msa0996280:CDS | 40.0% | |
GTCCTTAAGAAATCTGGAAG+AGG | + | chr6_4:74266692-74266711 | Msa0996280:CDS | 40.0% | |
ACCCTCTTCCAGATTTCTTA+AGG | - | chr6_4:74266697-74266716 | None:intergenic | 40.0% | |
TGAAGCAATGGAAGAAGGTT+GGG | - | chr6_4:74262715-74262734 | None:intergenic | 40.0% | |
ATGAAGCAATGGAAGAAGGT+TGG | - | chr6_4:74262716-74262735 | None:intergenic | 40.0% | |
GAGAATGAAGCAATGGAAGA+AGG | - | chr6_4:74262720-74262739 | None:intergenic | 40.0% | |
AGTGACCCAGAAGATGAATT+TGG | - | chr6_4:74262752-74262771 | None:intergenic | 40.0% | |
!!! | TTTTGGTGTTGCTTGATTGG+TGG | + | chr6_4:74263090-74263109 | Msa0996280:intron | 40.0% |
! | TGGTGGCAGTTGATATTGTT+AGG | + | chr6_4:74263107-74263126 | Msa0996280:intron | 40.0% |
! | GGTGGCAGTTGATATTGTTA+GGG | + | chr6_4:74263108-74263127 | Msa0996280:intron | 40.0% |
! | ATTGTTAGGGTGTTCTGGAT+TGG | + | chr6_4:74263121-74263140 | Msa0996280:five_prime_UTR | 40.0% |
!! | TGGCTCTGAATTTGCTACAA+TGG | + | chr6_4:74263141-74263160 | Msa0996280:exon | 40.0% |
TATATGAGACTAGGGAGTAG+GGG | + | chr6_4:74263400-74263419 | Msa0996280:intron | 40.0% | |
GGATGATTTCATGTCTGGTT+CGG | - | chr6_4:74263721-74263740 | None:intergenic | 40.0% | |
! | GTCTAGGATGATTTCATGTC+TGG | - | chr6_4:74263726-74263745 | None:intergenic | 40.0% |
! | CATGGTTCAACTGCTTTGAA+AGG | + | chr6_4:74263753-74263772 | Msa0996280:intron | 40.0% |
TATGTGAGATTTGAACGGGA+CGG | + | chr6_4:74264140-74264159 | Msa0996280:intron | 40.0% | |
CTATTTAACATGCTGCTGCT+TGG | + | chr6_4:74264178-74264197 | Msa0996280:intron | 40.0% | |
GTGGAGGATTGAATGTAAGA+TGG | - | chr6_4:74264221-74264240 | None:intergenic | 40.0% | |
AAAAAAAGTCTCCGGAAGAG+TGG | - | chr6_4:74264240-74264259 | None:intergenic | 40.0% | |
TTGCTATACAGTCGCTATAG+CGG | + | chr6_4:74264620-74264639 | Msa0996280:intron | 40.0% | |
ACTACAGCACTGTTTCACAA+CGG | + | chr6_4:74264758-74264777 | Msa0996280:intron | 40.0% | |
! | AGAGCATCAAAAGTTCCTTG+AGG | + | chr6_4:74264934-74264953 | Msa0996280:CDS | 40.0% |
! | TCGAATCTGAACTGCAGTTT+TGG | - | chr6_4:74265107-74265126 | None:intergenic | 40.0% |
GGTATGTCAATTGGCTGAAT+AGG | - | chr6_4:74265371-74265390 | None:intergenic | 40.0% | |
!! | AAGAGTCAACTGATTTGCGA+GGG | - | chr6_4:74265430-74265449 | None:intergenic | 40.0% |
!! | AAAGAGTCAACTGATTTGCG+AGG | - | chr6_4:74265431-74265450 | None:intergenic | 40.0% |
!!! | GGTTTTGAGTTGGTGGATAA+AGG | - | chr6_4:74265731-74265750 | None:intergenic | 40.0% |
!!! | CATAAGTGGTTTTGAGTTGG+TGG | - | chr6_4:74265738-74265757 | None:intergenic | 40.0% |
!!! | GGACATAAGTGGTTTTGAGT+TGG | - | chr6_4:74265741-74265760 | None:intergenic | 40.0% |
CTCAAAACCACTTATGTCCA+TGG | + | chr6_4:74265742-74265761 | Msa0996280:CDS | 40.0% | |
! | GTCCGAGATTATTTCTTCTG+AGG | + | chr6_4:74266142-74266161 | Msa0996280:intron | 40.0% |
TTTGGTCGAACACTCTCTAT+GGG | + | chr6_4:74266224-74266243 | Msa0996280:CDS | 40.0% | |
ATGGATGATCTTGAGAAGGT+TGG | + | chr6_4:74266311-74266330 | Msa0996280:CDS | 40.0% | |
TGGATGATCTTGAGAAGGTT+GGG | + | chr6_4:74266312-74266331 | Msa0996280:CDS | 40.0% | |
CAGAAGGAGAATCCATATGT+CGG | + | chr6_4:74266422-74266441 | Msa0996280:CDS | 40.0% | |
! | TTTGATGATTGCATGGCATG+AGG | - | chr6_4:74266502-74266521 | None:intergenic | 40.0% |
TTCTTAATCCTGTGCCTCTT+AGG | + | chr6_4:74266522-74266541 | Msa0996280:CDS | 40.0% | |
ATCTTCAAACAAGGCCTAAG+AGG | - | chr6_4:74266539-74266558 | None:intergenic | 40.0% | |
ACTCAAAAACATCGTCAGGA+AGG | + | chr6_4:74266665-74266684 | Msa0996280:CDS | 40.0% | |
GGAGTTGTCCTTAAGAAATC+TGG | + | chr6_4:74266686-74266705 | Msa0996280:CDS | 40.0% | |
GTCCTTAAGAAATCTGGAAG+AGG | + | chr6_4:74266692-74266711 | Msa0996280:CDS | 40.0% | |
ACCCTCTTCCAGATTTCTTA+AGG | - | chr6_4:74266697-74266716 | None:intergenic | 40.0% | |
ATATGAGACTAGGGAGTAGG+GGG | + | chr6_4:74263401-74263420 | Msa0996280:intron | 45.0% | |
! | GAGTAGGGGGAGTTTCTTTT+TGG | + | chr6_4:74263414-74263433 | Msa0996280:intron | 45.0% |
! | TCATCCTAGACTTTGGCTCA+TGG | + | chr6_4:74263735-74263754 | Msa0996280:intron | 45.0% |
TGAACCATGAGCCAAAGTCT+AGG | - | chr6_4:74263742-74263761 | None:intergenic | 45.0% | |
! | ATTCTAGGGGACAACGAACA+AGG | - | chr6_4:74263967-74263986 | None:intergenic | 45.0% |
TTCGTTGTCCCCTAGAATGT+TGG | + | chr6_4:74263969-74263988 | Msa0996280:intron | 45.0% | |
AACCTCGCTCCAACATTCTA+GGG | - | chr6_4:74263981-74264000 | None:intergenic | 45.0% | |
TAACCTCGCTCCAACATTCT+AGG | - | chr6_4:74263982-74264001 | None:intergenic | 45.0% | |
CATTCAATCCTCCACTCTTC+CGG | + | chr6_4:74264226-74264245 | Msa0996280:intron | 45.0% | |
! | GTTCAAGGCACTAAGTCAAC+TGG | + | chr6_4:74264456-74264475 | Msa0996280:CDS | 45.0% |
! | GGTAGTAAGTGCCATTCCAA+AGG | + | chr6_4:74264483-74264502 | Msa0996280:CDS | 45.0% |
! | AGTAAGTGCCATTCCAAAGG+TGG | + | chr6_4:74264486-74264505 | Msa0996280:CDS | 45.0% |
! | ACTGTGATCCACCTTTGGAA+TGG | - | chr6_4:74264497-74264516 | None:intergenic | 45.0% |
TTCAGACTGTGATCCACCTT+TGG | - | chr6_4:74264502-74264521 | None:intergenic | 45.0% | |
TGAAAATGATGCGAAGTCGC+AGG | + | chr6_4:74264518-74264537 | Msa0996280:CDS | 45.0% | |
TCGCAGGATATACCTTCTGT+CGG | + | chr6_4:74264534-74264553 | Msa0996280:CDS | 45.0% | |
GTAAAACAACCTTGGGAGCA+AGG | - | chr6_4:74264566-74264585 | None:intergenic | 45.0% | |
!! | GCTTTGAAACTTTATGGCCG+TGG | + | chr6_4:74264956-74264975 | Msa0996280:CDS | 45.0% |
CAATTGACATACCTCCTCCT+CGG | + | chr6_4:74265378-74265397 | Msa0996280:CDS | 45.0% | |
! | TTTGCGAGGGTATGGATGAA+GGG | - | chr6_4:74265417-74265436 | None:intergenic | 45.0% |
! | ATTTGCGAGGGTATGGATGA+AGG | - | chr6_4:74265418-74265437 | None:intergenic | 45.0% |
!! | TCAACTGATTTGCGAGGGTA+TGG | - | chr6_4:74265425-74265444 | None:intergenic | 45.0% |
TGTACTGTCTGCACTTGGTT+CGG | + | chr6_4:74265538-74265557 | Msa0996280:intron | 45.0% | |
ATCTCGGTGGTGCAAGAATT+TGG | - | chr6_4:74265614-74265633 | None:intergenic | 45.0% | |
GTTTGGTCGAACACTCTCTA+TGG | + | chr6_4:74266223-74266242 | Msa0996280:CDS | 45.0% | |
GGGTTCTCAGAAGTCAATGA+AGG | + | chr6_4:74266244-74266263 | Msa0996280:CDS | 45.0% | |
TGAGAAGGTTGGGCAAAAAG+AGG | + | chr6_4:74266322-74266341 | Msa0996280:CDS | 45.0% | |
GAGCATCATGGAACAACAGA+AGG | + | chr6_4:74266406-74266425 | Msa0996280:CDS | 45.0% | |
AGTGCGCAACTTTACCATTG+TGG | + | chr6_4:74266447-74266466 | Msa0996280:CDS | 45.0% | |
CCTTGGTACAAACTCCACAA+TGG | - | chr6_4:74266464-74266483 | None:intergenic | 45.0% | |
CCATTGTGGAGTTTGTACCA+AGG | + | chr6_4:74266461-74266480 | Msa0996280:CDS | 45.0% | |
! | ATCGCAGACTGATTCAGTGT+TGG | - | chr6_4:74266597-74266616 | None:intergenic | 45.0% |
!! | TGTTGGCTTGGAAGAAAGAG+AGG | + | chr6_4:74266766-74266785 | Msa0996280:CDS | 45.0% |
!! | GTTGGCTTGGAAGAAAGAGA+GGG | + | chr6_4:74266767-74266786 | Msa0996280:CDS | 45.0% |
ATATGAGACTAGGGAGTAGG+GGG | + | chr6_4:74263401-74263420 | Msa0996280:intron | 45.0% | |
! | GAGTAGGGGGAGTTTCTTTT+TGG | + | chr6_4:74263414-74263433 | Msa0996280:intron | 45.0% |
! | TCATCCTAGACTTTGGCTCA+TGG | + | chr6_4:74263735-74263754 | Msa0996280:intron | 45.0% |
TGAACCATGAGCCAAAGTCT+AGG | - | chr6_4:74263742-74263761 | None:intergenic | 45.0% | |
! | ATTCTAGGGGACAACGAACA+AGG | - | chr6_4:74263967-74263986 | None:intergenic | 45.0% |
TTCGTTGTCCCCTAGAATGT+TGG | + | chr6_4:74263969-74263988 | Msa0996280:intron | 45.0% | |
AACCTCGCTCCAACATTCTA+GGG | - | chr6_4:74263981-74264000 | None:intergenic | 45.0% | |
TAACCTCGCTCCAACATTCT+AGG | - | chr6_4:74263982-74264001 | None:intergenic | 45.0% | |
CATTCAATCCTCCACTCTTC+CGG | + | chr6_4:74264226-74264245 | Msa0996280:intron | 45.0% | |
! | GTTCAAGGCACTAAGTCAAC+TGG | + | chr6_4:74264456-74264475 | Msa0996280:CDS | 45.0% |
! | GGTAGTAAGTGCCATTCCAA+AGG | + | chr6_4:74264483-74264502 | Msa0996280:CDS | 45.0% |
! | AGTAAGTGCCATTCCAAAGG+TGG | + | chr6_4:74264486-74264505 | Msa0996280:CDS | 45.0% |
! | ACTGTGATCCACCTTTGGAA+TGG | - | chr6_4:74264497-74264516 | None:intergenic | 45.0% |
TTCAGACTGTGATCCACCTT+TGG | - | chr6_4:74264502-74264521 | None:intergenic | 45.0% | |
TGAAAATGATGCGAAGTCGC+AGG | + | chr6_4:74264518-74264537 | Msa0996280:CDS | 45.0% | |
TCGCAGGATATACCTTCTGT+CGG | + | chr6_4:74264534-74264553 | Msa0996280:CDS | 45.0% | |
GTAAAACAACCTTGGGAGCA+AGG | - | chr6_4:74264566-74264585 | None:intergenic | 45.0% | |
!! | GCTTTGAAACTTTATGGCCG+TGG | + | chr6_4:74264956-74264975 | Msa0996280:CDS | 45.0% |
CAATTGACATACCTCCTCCT+CGG | + | chr6_4:74265378-74265397 | Msa0996280:CDS | 45.0% | |
! | TTTGCGAGGGTATGGATGAA+GGG | - | chr6_4:74265417-74265436 | None:intergenic | 45.0% |
! | ATTTGCGAGGGTATGGATGA+AGG | - | chr6_4:74265418-74265437 | None:intergenic | 45.0% |
!! | TCAACTGATTTGCGAGGGTA+TGG | - | chr6_4:74265425-74265444 | None:intergenic | 45.0% |
TGTACTGTCTGCACTTGGTT+CGG | + | chr6_4:74265538-74265557 | Msa0996280:intron | 45.0% | |
ATCTCGGTGGTGCAAGAATT+TGG | - | chr6_4:74265614-74265633 | None:intergenic | 45.0% | |
GTTTGGTCGAACACTCTCTA+TGG | + | chr6_4:74266223-74266242 | Msa0996280:CDS | 45.0% | |
GGGTTCTCAGAAGTCAATGA+AGG | + | chr6_4:74266244-74266263 | Msa0996280:CDS | 45.0% | |
TGAGAAGGTTGGGCAAAAAG+AGG | + | chr6_4:74266322-74266341 | Msa0996280:CDS | 45.0% | |
GAGCATCATGGAACAACAGA+AGG | + | chr6_4:74266406-74266425 | Msa0996280:CDS | 45.0% | |
AGTGCGCAACTTTACCATTG+TGG | + | chr6_4:74266447-74266466 | Msa0996280:CDS | 45.0% | |
CCTTGGTACAAACTCCACAA+TGG | - | chr6_4:74266464-74266483 | None:intergenic | 45.0% | |
CCATTGTGGAGTTTGTACCA+AGG | + | chr6_4:74266461-74266480 | Msa0996280:CDS | 45.0% | |
! | ATCGCAGACTGATTCAGTGT+TGG | - | chr6_4:74266597-74266616 | None:intergenic | 45.0% |
!! | TGTTGGCTTGGAAGAAAGAG+AGG | + | chr6_4:74266766-74266785 | Msa0996280:CDS | 45.0% |
!! | GTTGGCTTGGAAGAAAGAGA+GGG | + | chr6_4:74266767-74266786 | Msa0996280:CDS | 45.0% |
GCAATGGAAGAAGGTTGGGT+TGG | - | chr6_4:74262711-74262730 | None:intergenic | 50.0% | |
ACCTCGCTCCAACATTCTAG+GGG | - | chr6_4:74263980-74263999 | None:intergenic | 50.0% | |
ACGGGACGGCAATTAAGCTT+AGG | + | chr6_4:74264154-74264173 | Msa0996280:intron | 50.0% | |
AAAAGTCTCCGGAAGAGTGG+AGG | - | chr6_4:74264237-74264256 | None:intergenic | 50.0% | |
GGCACTAAGTCAACTGGAAC+AGG | + | chr6_4:74264462-74264481 | Msa0996280:CDS | 50.0% | |
! | GCAAGGTTGTTTCCGACAGA+AGG | - | chr6_4:74264549-74264568 | None:intergenic | 50.0% |
TGAAACTTTATGGCCGTGGC+TGG | + | chr6_4:74264960-74264979 | Msa0996280:CDS | 50.0% | |
CTTCAATTTGACGCCAGCCA+CGG | - | chr6_4:74264976-74264995 | None:intergenic | 50.0% | |
CTACTTGGTTGCAGGTTGTG+CGG | + | chr6_4:74265321-74265340 | Msa0996280:intron | 50.0% | |
TACTTGGTTGCAGGTTGTGC+GGG | + | chr6_4:74265322-74265341 | Msa0996280:intron | 50.0% | |
! | CGAGGAGGAGGTATGTCAAT+TGG | - | chr6_4:74265380-74265399 | None:intergenic | 50.0% |
GGATGAAGGGGTTTCCTCTT+CGG | - | chr6_4:74265404-74265423 | None:intergenic | 50.0% | |
! | TTGCGAGGGTATGGATGAAG+GGG | - | chr6_4:74265416-74265435 | None:intergenic | 50.0% |
GCAACTGACAGGTTAGTGGA+TGG | - | chr6_4:74265491-74265510 | None:intergenic | 50.0% | |
CTCTGCAACTGACAGGTTAG+TGG | - | chr6_4:74265495-74265514 | None:intergenic | 50.0% | |
TGTCGTTCTCTGCAACTGAC+AGG | - | chr6_4:74265502-74265521 | None:intergenic | 50.0% | |
CAGTACAGAGGTAGGCGATT+GGG | - | chr6_4:74265525-74265544 | None:intergenic | 50.0% | |
ACAGTACAGAGGTAGGCGAT+TGG | - | chr6_4:74265526-74265545 | None:intergenic | 50.0% | |
AGTGCAGACAGTACAGAGGT+AGG | - | chr6_4:74265533-74265552 | None:intergenic | 50.0% | |
ACCTCTGTACTGTCTGCACT+TGG | + | chr6_4:74265533-74265552 | Msa0996280:CDS | 50.0% | |
ACCAAGTGCAGACAGTACAG+AGG | - | chr6_4:74265537-74265556 | None:intergenic | 50.0% | |
!! | GCACTTGGTTCGGAAGCATT+TGG | + | chr6_4:74265548-74265567 | Msa0996280:intron | 50.0% |
CAGCTTGTCGCCTGTTGAAA+AGG | + | chr6_4:74265643-74265662 | Msa0996280:CDS | 50.0% | |
! | CCTCAGATGGTTTGGATGTC+TGG | - | chr6_4:74265679-74265698 | None:intergenic | 50.0% |
CCAGACATCCAAACCATCTG+AGG | + | chr6_4:74265676-74265695 | Msa0996280:CDS | 50.0% | |
GACATCCAAACCATCTGAGG+AGG | + | chr6_4:74265679-74265698 | Msa0996280:CDS | 50.0% | |
CTCTTCCTCCTCAGATGGTT+TGG | - | chr6_4:74265687-74265706 | None:intergenic | 50.0% | |
CCTTTCTCTTCCTCCTCAGA+TGG | - | chr6_4:74265692-74265711 | None:intergenic | 50.0% | |
CCATCTGAGGAGGAAGAGAA+AGG | + | chr6_4:74265689-74265708 | Msa0996280:CDS | 50.0% | |
CTAGGCATGTGTACACCTGA+TGG | + | chr6_4:74266374-74266393 | Msa0996280:CDS | 50.0% | |
ATGCTCACTTGAGCTCCATC+AGG | - | chr6_4:74266392-74266411 | None:intergenic | 50.0% | |
TGGAGCTCAAGTGAGCATCA+TGG | + | chr6_4:74266394-74266413 | Msa0996280:CDS | 50.0% | |
GATGATTGCATGGCATGAGG+TGG | - | chr6_4:74266499-74266518 | None:intergenic | 50.0% | |
! | AAACAAGGCCTAAGAGGCAC+AGG | - | chr6_4:74266533-74266552 | None:intergenic | 50.0% |
GAAGAGGAAAGCTCTTGCAC+TGG | + | chr6_4:74266569-74266588 | Msa0996280:CDS | 50.0% | |
CACTGAATCAGTCTGCGATG+TGG | + | chr6_4:74266598-74266617 | Msa0996280:CDS | 50.0% | |
GCAATGGAAGAAGGTTGGGT+TGG | - | chr6_4:74262711-74262730 | None:intergenic | 50.0% | |
ACCTCGCTCCAACATTCTAG+GGG | - | chr6_4:74263980-74263999 | None:intergenic | 50.0% | |
ACGGGACGGCAATTAAGCTT+AGG | + | chr6_4:74264154-74264173 | Msa0996280:intron | 50.0% | |
AAAAGTCTCCGGAAGAGTGG+AGG | - | chr6_4:74264237-74264256 | None:intergenic | 50.0% | |
GGCACTAAGTCAACTGGAAC+AGG | + | chr6_4:74264462-74264481 | Msa0996280:CDS | 50.0% | |
! | GCAAGGTTGTTTCCGACAGA+AGG | - | chr6_4:74264549-74264568 | None:intergenic | 50.0% |
TGAAACTTTATGGCCGTGGC+TGG | + | chr6_4:74264960-74264979 | Msa0996280:CDS | 50.0% | |
CTTCAATTTGACGCCAGCCA+CGG | - | chr6_4:74264976-74264995 | None:intergenic | 50.0% | |
CTACTTGGTTGCAGGTTGTG+CGG | + | chr6_4:74265321-74265340 | Msa0996280:intron | 50.0% | |
TACTTGGTTGCAGGTTGTGC+GGG | + | chr6_4:74265322-74265341 | Msa0996280:intron | 50.0% | |
! | CGAGGAGGAGGTATGTCAAT+TGG | - | chr6_4:74265380-74265399 | None:intergenic | 50.0% |
GGATGAAGGGGTTTCCTCTT+CGG | - | chr6_4:74265404-74265423 | None:intergenic | 50.0% | |
! | TTGCGAGGGTATGGATGAAG+GGG | - | chr6_4:74265416-74265435 | None:intergenic | 50.0% |
GCAACTGACAGGTTAGTGGA+TGG | - | chr6_4:74265491-74265510 | None:intergenic | 50.0% | |
CTCTGCAACTGACAGGTTAG+TGG | - | chr6_4:74265495-74265514 | None:intergenic | 50.0% | |
TGTCGTTCTCTGCAACTGAC+AGG | - | chr6_4:74265502-74265521 | None:intergenic | 50.0% | |
CAGTACAGAGGTAGGCGATT+GGG | - | chr6_4:74265525-74265544 | None:intergenic | 50.0% | |
ACAGTACAGAGGTAGGCGAT+TGG | - | chr6_4:74265526-74265545 | None:intergenic | 50.0% | |
AGTGCAGACAGTACAGAGGT+AGG | - | chr6_4:74265533-74265552 | None:intergenic | 50.0% | |
ACCTCTGTACTGTCTGCACT+TGG | + | chr6_4:74265533-74265552 | Msa0996280:CDS | 50.0% | |
ACCAAGTGCAGACAGTACAG+AGG | - | chr6_4:74265537-74265556 | None:intergenic | 50.0% | |
!! | GCACTTGGTTCGGAAGCATT+TGG | + | chr6_4:74265548-74265567 | Msa0996280:intron | 50.0% |
CAGCTTGTCGCCTGTTGAAA+AGG | + | chr6_4:74265643-74265662 | Msa0996280:CDS | 50.0% | |
! | CCTCAGATGGTTTGGATGTC+TGG | - | chr6_4:74265679-74265698 | None:intergenic | 50.0% |
CCAGACATCCAAACCATCTG+AGG | + | chr6_4:74265676-74265695 | Msa0996280:CDS | 50.0% | |
GACATCCAAACCATCTGAGG+AGG | + | chr6_4:74265679-74265698 | Msa0996280:CDS | 50.0% | |
CTCTTCCTCCTCAGATGGTT+TGG | - | chr6_4:74265687-74265706 | None:intergenic | 50.0% | |
CCTTTCTCTTCCTCCTCAGA+TGG | - | chr6_4:74265692-74265711 | None:intergenic | 50.0% | |
CCATCTGAGGAGGAAGAGAA+AGG | + | chr6_4:74265689-74265708 | Msa0996280:CDS | 50.0% | |
CTAGGCATGTGTACACCTGA+TGG | + | chr6_4:74266374-74266393 | Msa0996280:CDS | 50.0% | |
ATGCTCACTTGAGCTCCATC+AGG | - | chr6_4:74266392-74266411 | None:intergenic | 50.0% | |
TGGAGCTCAAGTGAGCATCA+TGG | + | chr6_4:74266394-74266413 | Msa0996280:CDS | 50.0% | |
GATGATTGCATGGCATGAGG+TGG | - | chr6_4:74266499-74266518 | None:intergenic | 50.0% | |
! | AAACAAGGCCTAAGAGGCAC+AGG | - | chr6_4:74266533-74266552 | None:intergenic | 50.0% |
GAAGAGGAAAGCTCTTGCAC+TGG | + | chr6_4:74266569-74266588 | Msa0996280:CDS | 50.0% | |
CACTGAATCAGTCTGCGATG+TGG | + | chr6_4:74266598-74266617 | Msa0996280:CDS | 50.0% | |
TCCCCTAGAATGTTGGAGCG+AGG | + | chr6_4:74263976-74263995 | Msa0996280:intron | 55.0% | |
! | GCTGCTGCTTGGTATGAAGC+AGG | + | chr6_4:74264189-74264208 | Msa0996280:intron | 55.0% |
CGGAAACAACCTTGCTCCCA+AGG | + | chr6_4:74264554-74264573 | Msa0996280:CDS | 55.0% | |
CGTGGCTGGCGTCAAATTGA+AGG | + | chr6_4:74264974-74264993 | Msa0996280:CDS | 55.0% | |
GGACTTTCAGCACTGCCATC+AGG | - | chr6_4:74265350-74265369 | None:intergenic | 55.0% | |
TTGCACCACCGAGATTCACC+CGG | + | chr6_4:74265619-74265638 | Msa0996280:CDS | 55.0% | |
CAAGCTGACCGGGTGAATCT+CGG | - | chr6_4:74265630-74265649 | None:intergenic | 55.0% | |
TCAACAGGCGACAAGCTGAC+CGG | - | chr6_4:74265641-74265660 | None:intergenic | 55.0% | |
GCATGAGGTGGAAAGCTGGA+AGG | - | chr6_4:74266487-74266506 | None:intergenic | 55.0% | |
CATGGCATGAGGTGGAAAGC+TGG | - | chr6_4:74266491-74266510 | None:intergenic | 55.0% | |
TCCCCTAGAATGTTGGAGCG+AGG | + | chr6_4:74263976-74263995 | Msa0996280:intron | 55.0% | |
! | GCTGCTGCTTGGTATGAAGC+AGG | + | chr6_4:74264189-74264208 | Msa0996280:intron | 55.0% |
CGGAAACAACCTTGCTCCCA+AGG | + | chr6_4:74264554-74264573 | Msa0996280:CDS | 55.0% | |
CGTGGCTGGCGTCAAATTGA+AGG | + | chr6_4:74264974-74264993 | Msa0996280:CDS | 55.0% | |
GGACTTTCAGCACTGCCATC+AGG | - | chr6_4:74265350-74265369 | None:intergenic | 55.0% | |
TTGCACCACCGAGATTCACC+CGG | + | chr6_4:74265619-74265638 | Msa0996280:CDS | 55.0% | |
CAAGCTGACCGGGTGAATCT+CGG | - | chr6_4:74265630-74265649 | None:intergenic | 55.0% | |
TCAACAGGCGACAAGCTGAC+CGG | - | chr6_4:74265641-74265660 | None:intergenic | 55.0% | |
GCATGAGGTGGAAAGCTGGA+AGG | - | chr6_4:74266487-74266506 | None:intergenic | 55.0% | |
CATGGCATGAGGTGGAAAGC+TGG | - | chr6_4:74266491-74266510 | None:intergenic | 55.0% | |
CAGGTTGTGCGGGAACCTGA+TGG | + | chr6_4:74265332-74265351 | Msa0996280:intron | 60.0% | |
CAACAGGCGACAAGCTGACC+GGG | - | chr6_4:74265640-74265659 | None:intergenic | 60.0% | |
GTTGCGCACTCGCCGACATA+TGG | - | chr6_4:74266437-74266456 | None:intergenic | 60.0% | |
GGTGGAAAGCTGGAAGGCCT+TGG | - | chr6_4:74266481-74266500 | None:intergenic | 60.0% | |
CAGGTTGTGCGGGAACCTGA+TGG | + | chr6_4:74265332-74265351 | Msa0996280:intron | 60.0% | |
CAACAGGCGACAAGCTGACC+GGG | - | chr6_4:74265640-74265659 | None:intergenic | 60.0% | |
GTTGCGCACTCGCCGACATA+TGG | - | chr6_4:74266437-74266456 | None:intergenic | 60.0% | |
GGTGGAAAGCTGGAAGGCCT+TGG | - | chr6_4:74266481-74266500 | None:intergenic | 60.0% | |
TACCTCCTCCTCGGCCGAAG+AGG | + | chr6_4:74265387-74265406 | Msa0996280:CDS | 65.0% | |
TTCCTCTTCGGCCGAGGAGG+AGG | - | chr6_4:74265392-74265411 | None:intergenic | 65.0% | |
GGTTTCCTCTTCGGCCGAGG+AGG | - | chr6_4:74265395-74265414 | None:intergenic | 65.0% | |
AGGGGTTTCCTCTTCGGCCG+AGG | - | chr6_4:74265398-74265417 | None:intergenic | 65.0% | |
GCTGACCGGGTGAATCTCGG+TGG | - | chr6_4:74265627-74265646 | None:intergenic | 65.0% | |
TACCTCCTCCTCGGCCGAAG+AGG | + | chr6_4:74265387-74265406 | Msa0996280:CDS | 65.0% | |
TTCCTCTTCGGCCGAGGAGG+AGG | - | chr6_4:74265392-74265411 | None:intergenic | 65.0% | |
GGTTTCCTCTTCGGCCGAGG+AGG | - | chr6_4:74265395-74265414 | None:intergenic | 65.0% | |
AGGGGTTTCCTCTTCGGCCG+AGG | - | chr6_4:74265398-74265417 | None:intergenic | 65.0% | |
GCTGACCGGGTGAATCTCGG+TGG | - | chr6_4:74265627-74265646 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 74262705 | 74266811 | 74262705 | ID=Msa0996280;Name=Msa0996280 |
chr6_4 | mRNA | 74262705 | 74266811 | 74262705 | ID=Msa0996280-mRNA-1;Parent=Msa0996280;Name=Msa0996280-mRNA-1;_AED=0.26;_eAED=0.26;_QI=208|0.71|0.62|1|0.57|0.5|8|0|441 |
chr6_4 | exon | 74262705 | 74262868 | 74262705 | ID=Msa0996280-mRNA-1:exon:13880;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74263116 | 74263171 | 74263116 | ID=Msa0996280-mRNA-1:exon:13881;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74264450 | 74264575 | 74264450 | ID=Msa0996280-mRNA-1:exon:13882;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74264884 | 74264995 | 74264884 | ID=Msa0996280-mRNA-1:exon:13883;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74265092 | 74265153 | 74265092 | ID=Msa0996280-mRNA-1:exon:13884;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74265335 | 74265554 | 74265335 | ID=Msa0996280-mRNA-1:exon:13885;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74265564 | 74265763 | 74265564 | ID=Msa0996280-mRNA-1:exon:13886;Parent=Msa0996280-mRNA-1 |
chr6_4 | exon | 74266221 | 74266811 | 74266221 | ID=Msa0996280-mRNA-1:exon:13887;Parent=Msa0996280-mRNA-1 |
chr6_4 | five_prime_UTR | 74262705 | 74262868 | 74262705 | ID=Msa0996280-mRNA-1:five_prime_utr;Parent=Msa0996280-mRNA-1 |
chr6_4 | five_prime_UTR | 74263116 | 74263159 | 74263116 | ID=Msa0996280-mRNA-1:five_prime_utr;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74263160 | 74263171 | 74263160 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74264450 | 74264575 | 74264450 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74264884 | 74264995 | 74264884 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74265092 | 74265153 | 74265092 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74265335 | 74265554 | 74265335 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74265564 | 74265763 | 74265564 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
chr6_4 | CDS | 74266221 | 74266811 | 74266221 | ID=Msa0996280-mRNA-1:cds;Parent=Msa0996280-mRNA-1 |
Gene Sequence |
Protein sequence |