Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996670 | QSD99826.1 | 79.253 | 241 | 11 | 5 | 1 | 202 | 1 | 241 | 2.51e-124 | 362 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996670 | sp|Q9FY93|NAC83_ARATH | 69.714 | 175 | 49 | 2 | 1 | 171 | 1 | 175 | 8.56e-88 | 261 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996670 | A0A896WEL3 | 79.253 | 241 | 11 | 5 | 1 | 202 | 1 | 241 | 1.20e-124 | 362 |
Gene ID | Type | Classification |
---|---|---|
Msa0996670 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996670 | MtrunA17_Chr7g0214071 | 78.189 | 243 | 12 | 7 | 1 | 202 | 1 | 243 | 1.14e-121 | 345 |
Msa0996670 | MtrunA17_Chr8g0385991 | 55.612 | 196 | 73 | 5 | 1 | 184 | 1 | 194 | 1.37e-72 | 219 |
Msa0996670 | MtrunA17_Chr3g0131911 | 54.854 | 206 | 70 | 6 | 1 | 183 | 1 | 206 | 2.23e-69 | 211 |
Msa0996670 | MtrunA17_Chr4g0047841 | 55.747 | 174 | 46 | 4 | 14 | 156 | 15 | 188 | 4.47e-57 | 183 |
Msa0996670 | MtrunA17_Chr5g0417791 | 49.754 | 203 | 72 | 6 | 12 | 202 | 1 | 185 | 2.78e-56 | 179 |
Msa0996670 | MtrunA17_Chr2g0318101 | 57.407 | 162 | 50 | 4 | 14 | 156 | 15 | 176 | 7.11e-56 | 181 |
Msa0996670 | MtrunA17_Chr4g0042561 | 58.974 | 156 | 50 | 5 | 14 | 157 | 9 | 162 | 1.60e-55 | 177 |
Msa0996670 | MtrunA17_Chr7g0252971 | 47.525 | 202 | 84 | 5 | 11 | 193 | 5 | 203 | 5.49e-55 | 178 |
Msa0996670 | MtrunA17_Chr3g0124761 | 56.213 | 169 | 59 | 6 | 11 | 168 | 4 | 168 | 1.36e-54 | 175 |
Msa0996670 | MtrunA17_Chr7g0243371 | 89.773 | 88 | 9 | 0 | 57 | 144 | 12 | 99 | 1.45e-54 | 169 |
Msa0996670 | MtrunA17_Chr3g0139331 | 53.614 | 166 | 70 | 4 | 11 | 170 | 8 | 172 | 4.84e-54 | 176 |
Msa0996670 | MtrunA17_Chr1g0147421 | 53.012 | 166 | 71 | 3 | 11 | 169 | 24 | 189 | 8.25e-54 | 176 |
Msa0996670 | MtrunA17_Chr7g0263931 | 54.839 | 155 | 58 | 4 | 11 | 153 | 8 | 162 | 1.24e-53 | 174 |
Msa0996670 | MtrunA17_Chr3g0109821 | 59.615 | 156 | 50 | 5 | 12 | 156 | 4 | 157 | 1.24e-53 | 181 |
Msa0996670 | MtrunA17_Chr3g0130731 | 52.247 | 178 | 70 | 6 | 10 | 176 | 3 | 176 | 1.25e-52 | 170 |
Msa0996670 | MtrunA17_Chr4g0018391 | 53.012 | 166 | 67 | 5 | 14 | 170 | 7 | 170 | 1.31e-52 | 172 |
Msa0996670 | MtrunA17_Chr2g0309891 | 54.487 | 156 | 58 | 4 | 12 | 156 | 4 | 157 | 3.00e-52 | 171 |
Msa0996670 | MtrunA17_Chr4g0017921 | 57.516 | 153 | 53 | 6 | 14 | 157 | 8 | 157 | 1.30e-51 | 169 |
Msa0996670 | MtrunA17_Chr4g0056541 | 51.807 | 166 | 69 | 4 | 14 | 170 | 7 | 170 | 1.68e-51 | 169 |
Msa0996670 | MtrunA17_Chr8g0359921 | 51.500 | 200 | 69 | 8 | 11 | 198 | 11 | 194 | 1.91e-51 | 168 |
Msa0996670 | MtrunA17_Chr2g0326361 | 53.947 | 152 | 58 | 3 | 14 | 153 | 14 | 165 | 2.06e-51 | 168 |
Msa0996670 | MtrunA17_Chr8g0384721 | 54.167 | 168 | 61 | 6 | 10 | 165 | 3 | 166 | 3.50e-51 | 166 |
Msa0996670 | MtrunA17_Chr4g0060931 | 52.071 | 169 | 66 | 6 | 1 | 156 | 1 | 167 | 4.91e-51 | 168 |
Msa0996670 | MtrunA17_Chr1g0183741 | 44.776 | 201 | 97 | 5 | 14 | 201 | 10 | 209 | 7.44e-51 | 165 |
Msa0996670 | MtrunA17_Chr2g0316971 | 53.205 | 156 | 63 | 3 | 11 | 156 | 20 | 175 | 7.96e-51 | 168 |
Msa0996670 | MtrunA17_Chr5g0398971 | 50.311 | 161 | 69 | 4 | 14 | 164 | 7 | 166 | 8.53e-51 | 167 |
Msa0996670 | MtrunA17_Chr6g0484441 | 50.909 | 165 | 73 | 4 | 11 | 169 | 2 | 164 | 1.02e-50 | 166 |
Msa0996670 | MtrunA17_Chr2g0318081 | 53.757 | 173 | 58 | 6 | 10 | 172 | 12 | 172 | 1.22e-50 | 167 |
Msa0996670 | MtrunA17_Chr2g0309331 | 51.266 | 158 | 67 | 4 | 9 | 157 | 5 | 161 | 1.73e-50 | 166 |
Msa0996670 | MtrunA17_Chr6g0461661 | 48.810 | 168 | 76 | 3 | 12 | 169 | 16 | 183 | 4.25e-50 | 166 |
Msa0996670 | MtrunA17_Chr5g0433781 | 56.774 | 155 | 55 | 6 | 12 | 156 | 4 | 156 | 6.23e-50 | 171 |
Msa0996670 | MtrunA17_Chr1g0200561 | 53.548 | 155 | 61 | 4 | 11 | 156 | 16 | 168 | 8.69e-50 | 165 |
Msa0996670 | MtrunA17_Chr2g0312321 | 43.842 | 203 | 92 | 5 | 4 | 199 | 1 | 188 | 8.95e-50 | 163 |
Msa0996670 | MtrunA17_Chr5g0405211 | 46.154 | 195 | 86 | 7 | 11 | 196 | 5 | 189 | 1.30e-49 | 164 |
Msa0996670 | MtrunA17_Chr3g0091921 | 53.205 | 156 | 61 | 4 | 11 | 156 | 13 | 166 | 2.11e-49 | 162 |
Msa0996670 | MtrunA17_Chr8g0372121 | 51.553 | 161 | 67 | 5 | 14 | 165 | 6 | 164 | 2.54e-49 | 162 |
Msa0996670 | MtrunA17_Chr6g0481091 | 52.903 | 155 | 61 | 4 | 12 | 156 | 4 | 156 | 2.61e-49 | 160 |
Msa0996670 | MtrunA17_Chr6g0453451 | 52.941 | 153 | 60 | 5 | 14 | 156 | 20 | 170 | 1.28e-48 | 161 |
Msa0996670 | MtrunA17_Chr7g0261411 | 53.741 | 147 | 60 | 4 | 14 | 154 | 10 | 154 | 3.37e-48 | 159 |
Msa0996670 | MtrunA17_Chr8g0346001 | 45.745 | 188 | 79 | 6 | 2 | 169 | 3 | 187 | 1.33e-47 | 161 |
Msa0996670 | MtrunA17_Chr7g0253011 | 49.727 | 183 | 76 | 7 | 1 | 168 | 1 | 182 | 3.93e-47 | 159 |
Msa0996670 | MtrunA17_Chr5g0417001 | 45.652 | 184 | 84 | 3 | 1 | 168 | 1 | 184 | 3.71e-46 | 156 |
Msa0996670 | MtrunA17_Chr5g0400461 | 48.428 | 159 | 70 | 3 | 10 | 156 | 2 | 160 | 6.41e-46 | 154 |
Msa0996670 | MtrunA17_Chr8g0361731 | 38.559 | 236 | 108 | 5 | 1 | 199 | 1 | 236 | 8.66e-46 | 155 |
Msa0996670 | MtrunA17_Chr3g0144271 | 47.929 | 169 | 78 | 4 | 8 | 170 | 17 | 181 | 1.22e-45 | 156 |
Msa0996670 | MtrunA17_Chr4g0054791 | 49.405 | 168 | 71 | 5 | 14 | 170 | 6 | 170 | 3.64e-45 | 152 |
Msa0996670 | MtrunA17_Chr2g0311651 | 43.500 | 200 | 88 | 6 | 6 | 182 | 13 | 210 | 1.38e-44 | 150 |
Msa0996670 | MtrunA17_Chr5g0442771 | 50.909 | 165 | 62 | 6 | 8 | 154 | 13 | 176 | 1.39e-44 | 150 |
Msa0996670 | MtrunA17_Chr7g0217721 | 46.552 | 174 | 68 | 5 | 7 | 157 | 12 | 183 | 4.28e-44 | 150 |
Msa0996670 | MtrunA17_Chr7g0217711 | 54.412 | 136 | 53 | 4 | 7 | 136 | 12 | 144 | 8.55e-44 | 144 |
Msa0996670 | MtrunA17_Chr6g0453131 | 44.865 | 185 | 77 | 6 | 14 | 181 | 15 | 191 | 1.27e-43 | 150 |
Msa0996670 | MtrunA17_Chr5g0428991 | 47.368 | 171 | 78 | 4 | 13 | 173 | 24 | 192 | 1.92e-43 | 153 |
Msa0996670 | MtrunA17_Chr2g0311661 | 45.699 | 186 | 77 | 6 | 1 | 164 | 9 | 192 | 2.91e-43 | 146 |
Msa0996670 | MtrunA17_Chr3g0128111 | 45.562 | 169 | 72 | 5 | 17 | 167 | 45 | 211 | 9.73e-43 | 144 |
Msa0996670 | MtrunA17_Chr3g0128151 | 42.500 | 200 | 95 | 5 | 14 | 195 | 22 | 219 | 9.85e-43 | 151 |
Msa0996670 | MtrunA17_Chr3g0130101 | 49.351 | 154 | 60 | 6 | 16 | 156 | 9 | 157 | 1.49e-40 | 141 |
Msa0996670 | MtrunA17_Chr1g0197351 | 51.875 | 160 | 57 | 5 | 14 | 156 | 42 | 198 | 9.97e-40 | 141 |
Msa0996670 | MtrunA17_Chr8g0345671 | 47.973 | 148 | 66 | 4 | 14 | 153 | 11 | 155 | 1.14e-39 | 139 |
Msa0996670 | MtrunA17_Chr3g0092671 | 49.669 | 151 | 64 | 5 | 16 | 156 | 7 | 155 | 1.52e-39 | 141 |
Msa0996670 | MtrunA17_Chr1g0197361 | 48.344 | 151 | 66 | 5 | 16 | 156 | 10 | 158 | 1.13e-38 | 140 |
Msa0996670 | MtrunA17_Chr1g0201021 | 41.063 | 207 | 92 | 8 | 16 | 200 | 21 | 219 | 3.92e-38 | 138 |
Msa0996670 | MtrunA17_Chr4g0076731 | 49.333 | 150 | 68 | 5 | 16 | 159 | 56 | 203 | 1.35e-37 | 135 |
Msa0996670 | MtrunA17_Chr8g0364791 | 45.860 | 157 | 69 | 5 | 13 | 157 | 5 | 157 | 3.12e-37 | 134 |
Msa0996670 | MtrunA17_Chr4g0038751 | 44.444 | 162 | 80 | 6 | 1 | 156 | 4 | 161 | 1.06e-36 | 129 |
Msa0996670 | MtrunA17_Chr8g0384201 | 44.586 | 157 | 71 | 5 | 13 | 157 | 5 | 157 | 4.22e-35 | 129 |
Msa0996670 | MtrunA17_Chr4g0050701 | 38.286 | 175 | 88 | 4 | 14 | 175 | 11 | 178 | 4.36e-35 | 122 |
Msa0996670 | MtrunA17_Chr8g0345691 | 41.611 | 149 | 76 | 4 | 14 | 154 | 12 | 157 | 2.95e-33 | 123 |
Msa0996670 | MtrunA17_Chr4g0026141 | 41.772 | 158 | 75 | 6 | 14 | 155 | 5 | 161 | 8.58e-32 | 116 |
Msa0996670 | MtrunA17_Chr2g0321631 | 41.509 | 159 | 73 | 6 | 15 | 155 | 5 | 161 | 1.24e-31 | 115 |
Msa0996670 | MtrunA17_Chr2g0321741 | 45.255 | 137 | 60 | 5 | 43 | 172 | 23 | 151 | 4.79e-31 | 116 |
Msa0996670 | MtrunA17_Chr3g0113001 | 50.407 | 123 | 53 | 3 | 47 | 163 | 3 | 123 | 8.16e-31 | 114 |
Msa0996670 | MtrunA17_Chr8g0345711 | 43.411 | 129 | 64 | 3 | 14 | 134 | 12 | 139 | 1.04e-28 | 105 |
Msa0996670 | MtrunA17_Chr8g0384351 | 42.105 | 152 | 64 | 7 | 12 | 158 | 8 | 140 | 5.01e-28 | 104 |
Msa0996670 | MtrunA17_Chr8g0345731 | 43.182 | 132 | 63 | 4 | 14 | 134 | 24 | 154 | 5.52e-28 | 103 |
Msa0996670 | MtrunA17_Chr8g0345721 | 37.419 | 155 | 59 | 3 | 17 | 134 | 38 | 191 | 1.22e-26 | 101 |
Msa0996670 | MtrunA17_Chr7g0266701 | 30.275 | 218 | 108 | 8 | 14 | 190 | 4 | 218 | 1.75e-26 | 102 |
Msa0996670 | MtrunA17_Chr3g0113031 | 50.485 | 103 | 36 | 3 | 74 | 166 | 5 | 102 | 7.95e-26 | 100 |
Msa0996670 | MtrunA17_Chr8g0345741 | 33.125 | 160 | 92 | 4 | 25 | 176 | 2 | 154 | 3.38e-25 | 96.3 |
Msa0996670 | MtrunA17_Chr8g0345701 | 38.065 | 155 | 66 | 6 | 14 | 146 | 7 | 153 | 3.11e-24 | 94.4 |
Msa0996670 | MtrunA17_Chr3g0130321 | 35.366 | 164 | 76 | 6 | 12 | 154 | 5 | 159 | 1.99e-21 | 87.8 |
Msa0996670 | MtrunA17_Chr7g0251661 | 34.328 | 134 | 79 | 6 | 7 | 134 | 3 | 133 | 1.93e-17 | 75.9 |
Msa0996670 | MtrunA17_Chr7g0251651 | 31.928 | 166 | 103 | 6 | 6 | 164 | 10 | 172 | 1.71e-16 | 74.3 |
Msa0996670 | MtrunA17_Chr7g0251671 | 30.435 | 138 | 87 | 5 | 7 | 138 | 3 | 137 | 7.15e-15 | 69.3 |
Msa0996670 | MtrunA17_Chr1g0168571 | 34.028 | 144 | 80 | 6 | 22 | 152 | 13 | 154 | 5.53e-14 | 69.3 |
Msa0996670 | MtrunA17_Chr7g0274971 | 30.822 | 146 | 86 | 5 | 20 | 152 | 11 | 154 | 4.60e-13 | 65.5 |
Msa0996670 | MtrunA17_Chr3g0113011 | 50.877 | 57 | 26 | 1 | 7 | 61 | 12 | 68 | 4.91e-13 | 62.0 |
Msa0996670 | MtrunA17_Chr2g0282871 | 27.536 | 207 | 117 | 9 | 14 | 196 | 53 | 250 | 8.96e-12 | 62.8 |
Msa0996670 | MtrunA17_Chr4g0046431 | 28.108 | 185 | 108 | 9 | 14 | 177 | 68 | 248 | 3.46e-11 | 61.2 |
Msa0996670 | MtrunA17_Chr3g0113041 | 49.123 | 57 | 27 | 1 | 7 | 61 | 12 | 68 | 3.57e-11 | 57.0 |
Msa0996670 | MtrunA17_Chr4g0040541 | 30.612 | 147 | 77 | 6 | 14 | 138 | 48 | 191 | 4.54e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0996670 | AT5G13180.1 | 69.714 | 175 | 49 | 2 | 1 | 171 | 1 | 175 | 8.70e-89 | 261 |
Msa0996670 | AT2G33480.2 | 73.457 | 162 | 37 | 4 | 1 | 158 | 1 | 160 | 4.27e-83 | 248 |
Msa0996670 | AT2G33480.1 | 72.561 | 164 | 37 | 4 | 1 | 158 | 1 | 162 | 1.06e-82 | 246 |
Msa0996670 | AT1G61110.1 | 55.618 | 178 | 56 | 6 | 1 | 156 | 1 | 177 | 1.16e-55 | 179 |
Msa0996670 | AT3G04070.2 | 53.371 | 178 | 65 | 5 | 8 | 167 | 4 | 181 | 1.20e-55 | 180 |
Msa0996670 | AT1G69490.1 | 57.317 | 164 | 55 | 5 | 14 | 165 | 9 | 169 | 5.98e-55 | 176 |
Msa0996670 | AT1G77450.1 | 54.118 | 170 | 61 | 6 | 9 | 166 | 5 | 169 | 2.62e-54 | 174 |
Msa0996670 | AT2G24430.2 | 54.268 | 164 | 66 | 4 | 8 | 164 | 10 | 171 | 5.50e-54 | 175 |
Msa0996670 | AT2G24430.1 | 54.268 | 164 | 66 | 4 | 8 | 164 | 10 | 171 | 5.50e-54 | 175 |
Msa0996670 | AT3G04070.1 | 49.485 | 194 | 64 | 5 | 8 | 167 | 4 | 197 | 1.39e-53 | 175 |
Msa0996670 | AT5G17260.1 | 53.333 | 165 | 64 | 4 | 12 | 165 | 4 | 166 | 2.85e-53 | 177 |
Msa0996670 | AT1G12260.2 | 52.410 | 166 | 68 | 5 | 14 | 170 | 7 | 170 | 7.97e-53 | 172 |
Msa0996670 | AT5G39610.1 | 44.550 | 211 | 96 | 6 | 12 | 204 | 18 | 225 | 8.32e-53 | 171 |
Msa0996670 | AT5G61430.1 | 55.975 | 159 | 58 | 6 | 11 | 159 | 13 | 169 | 9.26e-53 | 172 |
Msa0996670 | AT3G03200.1 | 51.479 | 169 | 69 | 4 | 12 | 169 | 4 | 170 | 1.33e-52 | 176 |
Msa0996670 | AT4G27410.2 | 50.000 | 198 | 77 | 6 | 11 | 198 | 11 | 196 | 1.46e-52 | 171 |
Msa0996670 | AT1G33280.1 | 55.263 | 152 | 58 | 4 | 14 | 157 | 8 | 157 | 1.61e-52 | 171 |
Msa0996670 | AT3G15510.1 | 55.294 | 170 | 49 | 5 | 18 | 168 | 21 | 182 | 1.74e-52 | 172 |
Msa0996670 | AT5G07680.1 | 54.717 | 159 | 60 | 5 | 11 | 159 | 14 | 170 | 1.85e-52 | 171 |
Msa0996670 | AT5G07680.2 | 55.769 | 156 | 57 | 5 | 14 | 159 | 3 | 156 | 2.68e-52 | 171 |
Msa0996670 | AT1G65910.1 | 54.194 | 155 | 59 | 4 | 12 | 156 | 4 | 156 | 3.09e-52 | 177 |
Msa0996670 | AT1G12260.1 | 50.568 | 176 | 76 | 5 | 14 | 180 | 7 | 180 | 3.23e-52 | 172 |
Msa0996670 | AT1G54330.1 | 55.556 | 162 | 59 | 4 | 12 | 164 | 4 | 161 | 3.28e-52 | 170 |
Msa0996670 | AT4G10350.1 | 52.809 | 178 | 68 | 7 | 4 | 170 | 1 | 173 | 5.21e-52 | 171 |
Msa0996670 | AT1G62700.1 | 51.955 | 179 | 74 | 6 | 9 | 177 | 2 | 178 | 8.43e-52 | 171 |
Msa0996670 | AT1G62700.2 | 51.955 | 179 | 74 | 6 | 9 | 177 | 2 | 178 | 8.43e-52 | 171 |
Msa0996670 | AT3G18400.1 | 54.088 | 159 | 64 | 5 | 11 | 162 | 2 | 158 | 8.74e-52 | 169 |
Msa0996670 | AT5G53950.1 | 49.714 | 175 | 74 | 4 | 14 | 174 | 17 | 191 | 3.98e-51 | 169 |
Msa0996670 | AT5G66300.1 | 49.189 | 185 | 79 | 7 | 4 | 177 | 2 | 182 | 4.50e-51 | 167 |
Msa0996670 | AT1G76420.1 | 53.896 | 154 | 62 | 4 | 11 | 156 | 19 | 171 | 4.71e-51 | 168 |
Msa0996670 | AT2G18060.3 | 50.847 | 177 | 72 | 7 | 14 | 180 | 9 | 180 | 8.07e-51 | 168 |
Msa0996670 | AT2G18060.1 | 50.847 | 177 | 72 | 7 | 14 | 180 | 9 | 180 | 8.07e-51 | 168 |
Msa0996670 | AT3G15170.1 | 52.564 | 156 | 64 | 4 | 11 | 156 | 17 | 172 | 9.18e-51 | 166 |
Msa0996670 | AT5G18270.2 | 54.194 | 155 | 60 | 4 | 12 | 156 | 19 | 172 | 1.71e-50 | 166 |
Msa0996670 | AT3G04060.1 | 55.484 | 155 | 58 | 5 | 12 | 156 | 18 | 171 | 1.95e-50 | 166 |
Msa0996670 | AT5G18270.1 | 54.194 | 155 | 60 | 4 | 12 | 156 | 19 | 172 | 3.88e-50 | 166 |
Msa0996670 | AT5G62380.2 | 53.548 | 155 | 61 | 4 | 12 | 157 | 5 | 157 | 3.99e-50 | 166 |
Msa0996670 | AT5G62380.1 | 53.548 | 155 | 61 | 4 | 12 | 157 | 5 | 157 | 3.99e-50 | 166 |
Msa0996670 | AT1G01720.1 | 50.273 | 183 | 72 | 7 | 12 | 182 | 5 | 180 | 5.31e-50 | 164 |
Msa0996670 | AT4G36160.2 | 47.368 | 190 | 84 | 6 | 1 | 179 | 1 | 185 | 5.40e-50 | 166 |
Msa0996670 | AT4G36160.1 | 49.718 | 177 | 73 | 6 | 14 | 179 | 10 | 181 | 6.51e-50 | 166 |
Msa0996670 | AT4G36160.3 | 49.718 | 177 | 73 | 6 | 14 | 179 | 10 | 181 | 6.51e-50 | 166 |
Msa0996670 | AT4G27410.3 | 46.047 | 215 | 77 | 6 | 11 | 198 | 11 | 213 | 9.15e-50 | 164 |
Msa0996670 | AT3G17730.1 | 52.258 | 155 | 62 | 4 | 12 | 156 | 4 | 156 | 1.21e-49 | 162 |
Msa0996670 | AT5G46590.1 | 51.266 | 158 | 65 | 4 | 10 | 156 | 2 | 158 | 1.53e-49 | 163 |
Msa0996670 | AT1G71930.2 | 51.316 | 152 | 63 | 4 | 14 | 156 | 9 | 158 | 3.14e-49 | 163 |
Msa0996670 | AT1G71930.1 | 51.316 | 152 | 63 | 4 | 14 | 156 | 9 | 158 | 3.14e-49 | 163 |
Msa0996670 | AT1G52890.1 | 52.174 | 161 | 67 | 4 | 11 | 163 | 11 | 169 | 5.23e-49 | 162 |
Msa0996670 | AT5G63790.1 | 50.857 | 175 | 69 | 6 | 10 | 171 | 46 | 216 | 4.46e-48 | 160 |
Msa0996670 | AT1G33060.1 | 53.595 | 153 | 59 | 4 | 14 | 156 | 24 | 174 | 4.66e-48 | 166 |
Msa0996670 | AT5G08790.1 | 46.698 | 212 | 88 | 10 | 11 | 205 | 4 | 207 | 4.83e-48 | 159 |
Msa0996670 | AT5G63790.2 | 50.857 | 175 | 69 | 6 | 10 | 171 | 56 | 226 | 5.08e-48 | 160 |
Msa0996670 | AT1G33060.2 | 53.595 | 153 | 59 | 4 | 14 | 156 | 24 | 174 | 5.21e-48 | 166 |
Msa0996670 | AT3G12977.1 | 54.487 | 156 | 58 | 7 | 11 | 156 | 15 | 167 | 6.33e-48 | 158 |
Msa0996670 | AT2G33480.3 | 69.524 | 105 | 27 | 2 | 57 | 158 | 3 | 105 | 7.37e-48 | 156 |
Msa0996670 | AT3G15500.1 | 52.761 | 163 | 63 | 5 | 11 | 163 | 11 | 169 | 7.68e-48 | 159 |
Msa0996670 | AT1G79580.3 | 51.592 | 157 | 65 | 4 | 10 | 157 | 13 | 167 | 1.11e-47 | 160 |
Msa0996670 | AT1G79580.5 | 51.592 | 157 | 65 | 4 | 10 | 157 | 13 | 167 | 1.11e-47 | 160 |
Msa0996670 | AT1G79580.4 | 51.592 | 157 | 65 | 4 | 10 | 157 | 13 | 167 | 1.11e-47 | 160 |
Msa0996670 | AT1G79580.2 | 51.592 | 157 | 65 | 4 | 10 | 157 | 13 | 167 | 1.11e-47 | 160 |
Msa0996670 | AT1G79580.1 | 51.592 | 157 | 65 | 4 | 10 | 157 | 13 | 167 | 1.11e-47 | 160 |
Msa0996670 | AT1G56010.2 | 46.512 | 172 | 77 | 5 | 11 | 169 | 16 | 185 | 3.61e-47 | 157 |
Msa0996670 | AT4G17980.1 | 48.428 | 159 | 70 | 3 | 10 | 156 | 2 | 160 | 3.95e-47 | 155 |
Msa0996670 | AT4G35580.3 | 53.595 | 153 | 59 | 4 | 14 | 156 | 9 | 159 | 4.52e-47 | 162 |
Msa0996670 | AT4G35580.2 | 53.595 | 153 | 59 | 4 | 14 | 156 | 9 | 159 | 4.94e-47 | 162 |
Msa0996670 | AT4G35580.1 | 53.595 | 153 | 59 | 4 | 14 | 156 | 9 | 159 | 4.99e-47 | 161 |
Msa0996670 | AT3G61910.1 | 43.814 | 194 | 82 | 7 | 4 | 173 | 1 | 191 | 5.88e-47 | 157 |
Msa0996670 | AT1G52880.1 | 45.631 | 206 | 86 | 5 | 18 | 205 | 21 | 218 | 6.30e-47 | 157 |
Msa0996670 | AT3G29035.1 | 49.701 | 167 | 72 | 4 | 11 | 167 | 21 | 185 | 6.53e-47 | 157 |
Msa0996670 | AT4G17980.2 | 48.428 | 159 | 70 | 3 | 10 | 156 | 2 | 160 | 7.43e-47 | 156 |
Msa0996670 | AT1G32770.1 | 46.023 | 176 | 72 | 5 | 3 | 157 | 5 | 178 | 8.22e-47 | 157 |
Msa0996670 | AT3G10490.1 | 53.247 | 154 | 59 | 4 | 14 | 156 | 27 | 178 | 1.09e-46 | 154 |
Msa0996670 | AT2G46770.1 | 46.111 | 180 | 71 | 5 | 2 | 157 | 4 | 181 | 1.44e-46 | 157 |
Msa0996670 | AT3G10480.1 | 53.896 | 154 | 58 | 4 | 14 | 156 | 27 | 178 | 2.18e-46 | 159 |
Msa0996670 | AT5G46590.2 | 50.345 | 145 | 64 | 3 | 10 | 147 | 2 | 145 | 5.08e-46 | 153 |
Msa0996670 | AT5G39820.1 | 43.284 | 201 | 78 | 5 | 2 | 173 | 8 | 201 | 2.94e-45 | 153 |
Msa0996670 | AT3G10480.2 | 53.595 | 153 | 59 | 4 | 14 | 156 | 27 | 177 | 3.14e-45 | 155 |
Msa0996670 | AT4G28530.1 | 46.821 | 173 | 70 | 4 | 7 | 158 | 3 | 174 | 3.54e-45 | 153 |
Msa0996670 | AT3G10490.2 | 53.247 | 154 | 59 | 4 | 14 | 156 | 27 | 178 | 8.21e-45 | 154 |
Msa0996670 | AT3G10500.1 | 51.634 | 153 | 62 | 4 | 14 | 156 | 9 | 159 | 1.98e-43 | 152 |
Msa0996670 | AT5G04410.1 | 52.941 | 153 | 60 | 4 | 14 | 156 | 9 | 159 | 2.06e-43 | 153 |
Msa0996670 | AT1G32510.1 | 46.857 | 175 | 76 | 5 | 14 | 172 | 6 | 179 | 2.97e-42 | 144 |
Msa0996670 | AT3G12910.1 | 47.826 | 161 | 62 | 5 | 16 | 154 | 23 | 183 | 3.87e-42 | 144 |
Msa0996670 | AT3G49530.2 | 44.848 | 165 | 80 | 4 | 14 | 168 | 13 | 176 | 8.90e-42 | 145 |
Msa0996670 | AT1G26870.1 | 48.750 | 160 | 65 | 4 | 14 | 156 | 16 | 175 | 9.24e-42 | 146 |
Msa0996670 | AT3G49530.1 | 44.848 | 165 | 80 | 4 | 14 | 168 | 13 | 176 | 1.45e-41 | 146 |
Msa0996670 | AT3G10480.3 | 44.385 | 187 | 58 | 4 | 14 | 156 | 27 | 211 | 1.79e-41 | 147 |
Msa0996670 | AT2G17040.1 | 44.199 | 181 | 78 | 6 | 16 | 175 | 8 | 186 | 3.05e-41 | 141 |
Msa0996670 | AT5G24590.2 | 48.101 | 158 | 63 | 5 | 14 | 157 | 13 | 165 | 1.87e-40 | 143 |
Msa0996670 | AT2G43000.1 | 49.324 | 148 | 64 | 5 | 16 | 154 | 20 | 165 | 6.32e-40 | 137 |
Msa0996670 | AT2G02450.1 | 50.000 | 150 | 67 | 5 | 16 | 159 | 53 | 200 | 2.23e-39 | 139 |
Msa0996670 | AT2G02450.2 | 50.000 | 150 | 67 | 5 | 16 | 159 | 53 | 200 | 3.32e-39 | 139 |
Msa0996670 | AT5G64060.1 | 46.497 | 157 | 72 | 4 | 10 | 156 | 2 | 156 | 1.94e-38 | 135 |
Msa0996670 | AT1G34180.3 | 55.039 | 129 | 47 | 4 | 16 | 136 | 18 | 143 | 3.28e-38 | 137 |
Msa0996670 | AT1G34190.1 | 49.673 | 153 | 61 | 6 | 16 | 156 | 18 | 166 | 4.10e-38 | 138 |
Msa0996670 | AT1G34180.1 | 55.039 | 129 | 47 | 4 | 16 | 136 | 18 | 143 | 9.53e-38 | 137 |
Msa0996670 | AT1G34180.4 | 50.355 | 141 | 47 | 4 | 16 | 136 | 18 | 155 | 3.78e-37 | 134 |
Msa0996670 | AT5G09330.5 | 42.647 | 204 | 101 | 7 | 10 | 202 | 2 | 200 | 6.41e-37 | 134 |
Msa0996670 | AT5G09330.2 | 42.647 | 204 | 101 | 7 | 10 | 202 | 2 | 200 | 6.41e-37 | 134 |
Msa0996670 | AT5G09330.4 | 42.647 | 204 | 101 | 7 | 10 | 202 | 2 | 200 | 6.41e-37 | 134 |
Msa0996670 | AT5G09330.3 | 42.647 | 204 | 101 | 7 | 10 | 202 | 2 | 200 | 6.41e-37 | 134 |
Msa0996670 | AT5G09330.1 | 42.647 | 204 | 101 | 7 | 10 | 202 | 2 | 200 | 6.41e-37 | 134 |
Msa0996670 | AT1G34180.2 | 50.355 | 141 | 47 | 4 | 16 | 136 | 18 | 155 | 9.61e-37 | 135 |
Msa0996670 | AT5G22290.1 | 43.558 | 163 | 76 | 6 | 16 | 172 | 23 | 175 | 3.23e-36 | 129 |
Msa0996670 | AT3G44290.2 | 45.139 | 144 | 67 | 4 | 16 | 153 | 16 | 153 | 7.72e-36 | 125 |
Msa0996670 | AT2G27300.1 | 44.521 | 146 | 69 | 4 | 14 | 153 | 14 | 153 | 1.52e-35 | 128 |
Msa0996670 | AT4G10350.2 | 54.464 | 112 | 45 | 3 | 62 | 170 | 18 | 126 | 4.46e-35 | 125 |
Msa0996670 | AT3G44290.1 | 45.139 | 144 | 67 | 4 | 16 | 153 | 16 | 153 | 8.16e-35 | 126 |
Msa0996670 | AT5G04395.1 | 44.521 | 146 | 62 | 3 | 11 | 137 | 25 | 170 | 2.21e-34 | 120 |
Msa0996670 | AT5G64530.1 | 38.333 | 180 | 79 | 5 | 12 | 170 | 1 | 169 | 1.00e-32 | 116 |
Msa0996670 | AT5G61430.2 | 55.340 | 103 | 39 | 3 | 62 | 159 | 6 | 106 | 3.60e-32 | 117 |
Msa0996670 | AT5G64530.2 | 46.512 | 129 | 54 | 4 | 12 | 136 | 1 | 118 | 5.50e-32 | 114 |
Msa0996670 | AT3G12977.2 | 56.122 | 98 | 37 | 3 | 63 | 156 | 19 | 114 | 1.53e-30 | 112 |
Msa0996670 | AT1G02230.1 | 41.818 | 165 | 80 | 7 | 15 | 169 | 4 | 162 | 6.24e-30 | 113 |
Msa0996670 | AT1G56010.1 | 49.091 | 110 | 47 | 3 | 66 | 168 | 10 | 117 | 7.29e-30 | 111 |
Msa0996670 | AT1G02250.1 | 41.071 | 168 | 83 | 6 | 15 | 172 | 4 | 165 | 1.03e-28 | 110 |
Msa0996670 | AT5G50820.1 | 41.844 | 141 | 74 | 4 | 6 | 142 | 8 | 144 | 1.12e-28 | 106 |
Msa0996670 | AT1G32870.2 | 51.095 | 137 | 54 | 5 | 7 | 136 | 5 | 135 | 1.28e-28 | 112 |
Msa0996670 | AT1G32870.1 | 51.095 | 137 | 54 | 5 | 7 | 136 | 5 | 135 | 1.39e-28 | 112 |
Msa0996670 | AT1G32870.3 | 51.095 | 137 | 54 | 5 | 7 | 136 | 41 | 171 | 1.64e-28 | 112 |
Msa0996670 | AT5G14000.1 | 36.310 | 168 | 99 | 5 | 6 | 168 | 7 | 171 | 5.57e-28 | 105 |
Msa0996670 | AT4G01550.1 | 38.037 | 163 | 89 | 5 | 17 | 169 | 7 | 167 | 2.12e-27 | 108 |
Msa0996670 | AT4G01520.1 | 37.870 | 169 | 91 | 6 | 15 | 173 | 5 | 169 | 2.63e-27 | 105 |
Msa0996670 | AT5G14000.2 | 38.776 | 147 | 83 | 4 | 7 | 148 | 8 | 152 | 3.28e-27 | 101 |
Msa0996670 | AT4G01540.4 | 38.323 | 167 | 89 | 6 | 17 | 173 | 7 | 169 | 1.66e-26 | 105 |
Msa0996670 | AT4G01540.2 | 38.323 | 167 | 89 | 6 | 17 | 173 | 7 | 169 | 2.58e-26 | 104 |
Msa0996670 | AT4G01540.3 | 38.323 | 167 | 89 | 6 | 17 | 173 | 7 | 169 | 2.86e-26 | 104 |
Msa0996670 | AT4G01540.1 | 38.323 | 167 | 89 | 6 | 17 | 173 | 7 | 169 | 4.05e-26 | 104 |
Msa0996670 | AT3G44350.2 | 38.710 | 155 | 78 | 5 | 17 | 156 | 8 | 160 | 7.05e-26 | 100 |
Msa0996670 | AT5G22380.1 | 37.821 | 156 | 78 | 5 | 17 | 155 | 8 | 161 | 1.88e-25 | 99.4 |
Msa0996670 | AT3G04420.2 | 38.608 | 158 | 82 | 6 | 15 | 163 | 4 | 155 | 2.56e-25 | 100 |
Msa0996670 | AT3G04420.1 | 38.608 | 158 | 82 | 6 | 15 | 163 | 4 | 155 | 3.88e-25 | 100 |
Msa0996670 | AT3G44350.1 | 40.288 | 139 | 70 | 4 | 14 | 141 | 5 | 141 | 2.18e-24 | 94.4 |
Msa0996670 | AT4G28530.2 | 40.000 | 135 | 60 | 3 | 7 | 120 | 3 | 137 | 3.20e-23 | 95.1 |
Msa0996670 | AT2G18060.2 | 48.958 | 96 | 42 | 4 | 87 | 180 | 2 | 92 | 1.48e-22 | 92.4 |
Msa0996670 | AT1G02220.1 | 39.216 | 153 | 71 | 6 | 15 | 155 | 4 | 146 | 2.41e-22 | 93.6 |
Msa0996670 | AT3G10490.4 | 53.165 | 79 | 31 | 2 | 82 | 156 | 2 | 78 | 1.45e-20 | 88.2 |
Msa0996670 | AT3G10490.3 | 53.165 | 79 | 31 | 2 | 82 | 156 | 2 | 78 | 1.45e-20 | 88.2 |
Msa0996670 | AT2G43000.2 | 49.412 | 85 | 37 | 3 | 74 | 154 | 5 | 87 | 2.15e-19 | 82.4 |
Msa0996670 | AT1G01010.1 | 34.395 | 157 | 80 | 6 | 17 | 156 | 6 | 156 | 1.91e-17 | 80.1 |
Msa0996670 | AT3G55210.1 | 33.939 | 165 | 79 | 8 | 14 | 155 | 11 | 168 | 7.53e-17 | 77.0 |
Msa0996670 | AT3G56530.1 | 34.839 | 155 | 88 | 6 | 11 | 155 | 49 | 200 | 4.73e-16 | 75.5 |
Msa0996670 | AT5G22290.2 | 44.706 | 85 | 37 | 4 | 88 | 172 | 2 | 76 | 2.66e-14 | 69.7 |
Msa0996670 | AT5G41090.1 | 27.950 | 161 | 92 | 5 | 14 | 157 | 8 | 161 | 7.45e-13 | 65.1 |
Msa0996670 | AT1G28470.1 | 31.902 | 163 | 88 | 9 | 14 | 156 | 77 | 236 | 5.54e-12 | 63.9 |
Msa0996670 | AT5G14000.3 | 52.727 | 55 | 24 | 1 | 7 | 59 | 8 | 62 | 2.37e-11 | 61.6 |
Msa0996670 | AT4G29230.3 | 29.255 | 188 | 100 | 9 | 12 | 170 | 46 | 229 | 3.00e-11 | 62.0 |
Msa0996670 | AT3G04430.1 | 31.206 | 141 | 80 | 4 | 20 | 144 | 6 | 145 | 3.67e-11 | 60.5 |
Msa0996670 | AT4G29230.2 | 29.255 | 188 | 100 | 9 | 12 | 170 | 45 | 228 | 4.16e-11 | 62.0 |
Msa0996670 | AT4G29230.1 | 29.255 | 188 | 100 | 9 | 12 | 170 | 46 | 229 | 4.16e-11 | 62.0 |
Find 42 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTCAATCACAAATGAAT+TGG | 0.308698 | 6_4:+75214148 | Msa0996670:CDS |
CTGTTAGATCGGTTCCCATT+TGG | 0.335676 | 6_4:-75213734 | None:intergenic |
GAGCTACAAACTCTGGTTAC+TGG | 0.339051 | 6_4:+75213756 | Msa0996670:CDS |
ATCTTTGCAAGTCTGATCCT+TGG | 0.370348 | 6_4:+75213475 | Msa0996670:CDS |
TCTTTGCAAGTCTGATCCTT+GGG | 0.393386 | 6_4:+75213476 | Msa0996670:CDS |
ATCCAATTCATTTGTGATTG+AGG | 0.401398 | 6_4:-75214150 | None:intergenic |
TCGGTTCCCATTTGGATACT+TGG | 0.402648 | 6_4:-75213726 | None:intergenic |
TCAAAGACTCATGAAGTTGT+TGG | 0.413398 | 6_4:+75213812 | Msa0996670:CDS |
TTCATTTGTGATTGAGGAGG+AGG | 0.421555 | 6_4:-75214144 | None:intergenic |
CTTCATCTGTTGGATGAAAA+CGG | 0.429980 | 6_4:-75213386 | None:intergenic |
AAAGAAGCCAAGTATCCAAA+TGG | 0.440359 | 6_4:+75213719 | Msa0996670:CDS |
ATGCATGATCCAATCAGTTC+TGG | 0.442153 | 6_4:-75213882 | None:intergenic |
TCTGGTTACTGGAAAGCAAC+TGG | 0.454286 | 6_4:+75213767 | Msa0996670:CDS |
TTACTGGAAAGCAACTGGTT+TGG | 0.462280 | 6_4:+75213772 | Msa0996670:CDS |
ACAACAAGTTCTTCATCTGT+TGG | 0.464543 | 6_4:-75213396 | None:intergenic |
GACTTGCAAAGATCAACTTC+AGG | 0.465462 | 6_4:-75213465 | None:intergenic |
AAGATCAACTTCAGGAATGA+TGG | 0.468508 | 6_4:-75213457 | None:intergenic |
TTCCTCTCACTCCAACCCCT+TGG | 0.484311 | 6_4:+75213919 | Msa0996670:CDS |
CTCAGCTTCAAGTTCGAAAG+TGG | 0.494091 | 6_4:+75214076 | Msa0996670:CDS |
CTCATGGTTCCAGAACTGAT+TGG | 0.514422 | 6_4:+75213873 | Msa0996670:CDS |
GGTTGGAGTGAGAGGAAGTG+AGG | 0.514880 | 6_4:-75213913 | None:intergenic |
AGTTTGTAGCTCTGTTAGAT+CGG | 0.532621 | 6_4:-75213745 | None:intergenic |
ACTTCAGGAATGATGGAAGC+AGG | 0.542259 | 6_4:-75213450 | None:intergenic |
AAGAAGCCAAGTATCCAAAT+GGG | 0.544681 | 6_4:+75213720 | Msa0996670:CDS |
GACCAAGGGGTTGGAGTGAG+AGG | 0.548262 | 6_4:-75213921 | None:intergenic |
AGAAAGACTGACCAAGGGGT+TGG | 0.548887 | 6_4:-75213930 | None:intergenic |
TGTTCAATACTTGAAGCGTA+AGG | 0.550952 | 6_4:+75213416 | Msa0996670:CDS |
TCTAACAGAGCTACAAACTC+TGG | 0.560803 | 6_4:+75213749 | Msa0996670:CDS |
CAATTCATTTGTGATTGAGG+AGG | 0.568174 | 6_4:-75214147 | None:intergenic |
TCTGATCCTTGGGATTTACC+TGG | 0.570788 | 6_4:+75213486 | Msa0996670:CDS |
TGTGTCGCATATTTCTGAAG+AGG | 0.578122 | 6_4:+75214030 | Msa0996670:CDS |
TACAGAGGCAAACCACCTCA+TGG | 0.581454 | 6_4:+75213857 | Msa0996670:CDS |
TTGGATGAACATGAAAATGA+AGG | 0.590828 | 6_4:+75214167 | Msa0996670:CDS |
CGCATATTTCTGAAGAGGAG+AGG | 0.611502 | 6_4:+75214035 | Msa0996670:CDS |
GTTGGATGAAAACGGAAACC+TGG | 0.621096 | 6_4:-75213378 | None:intergenic |
GGTGAAGTGAGATTGCCACC+AGG | 0.631641 | 6_4:+75213360 | Msa0996670:CDS |
TATATACCAGGTAAATCCCA+AGG | 0.646995 | 6_4:-75213492 | None:intergenic |
TCAGTTCTGGAACCATGAGG+TGG | 0.656678 | 6_4:-75213869 | None:intergenic |
TAGGTGATATGGAACAAGAG+AGG | 0.664397 | 6_4:+75213681 | Msa0996670:intron |
ATTTCTGAAGAGGAGAGGTG+AGG | 0.700060 | 6_4:+75214040 | Msa0996670:CDS |
CAATCAGTTCTGGAACCATG+AGG | 0.718936 | 6_4:-75213872 | None:intergenic |
GGATGAAAACGGAAACCTGG+TGG | 0.761895 | 6_4:-75213375 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATTAATATGAATGAAT+TGG | + | chr6_4:75213982-75214001 | Msa0996670:intron | 10.0% |
!! | AATATTAATATGAATGAATT+GGG | + | chr6_4:75213983-75214002 | Msa0996670:intron | 10.0% |
!! | TAATATTAATATGAATGAAT+TGG | + | chr6_4:75213982-75214001 | Msa0996670:intron | 10.0% |
!! | AATATTAATATGAATGAATT+GGG | + | chr6_4:75213983-75214002 | Msa0996670:intron | 10.0% |
!! | AAGATGAATTTTGTGAAGAA+TGG | + | chr6_4:75213339-75213358 | Msa0996670:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | - | chr6_4:75213522-75213541 | None:intergenic | 25.0% |
! | TTACAAATTCAGAGAAAGAA+AGG | - | chr6_4:75213961-75213980 | None:intergenic | 25.0% |
!! | AAGATGAATTTTGTGAAGAA+TGG | + | chr6_4:75213339-75213358 | Msa0996670:CDS | 25.0% |
! | ATGAACGAAAAAGAAAAGAA+AGG | - | chr6_4:75213522-75213541 | None:intergenic | 25.0% |
! | TTACAAATTCAGAGAAAGAA+AGG | - | chr6_4:75213961-75213980 | None:intergenic | 25.0% |
! | AAGAAAGGTACATATATACC+AGG | - | chr6_4:75213507-75213526 | None:intergenic | 30.0% |
!! | TGTTGTTCTTTTAGGTGATA+TGG | + | chr6_4:75213670-75213689 | Msa0996670:intron | 30.0% |
!!! | AAAACTCTTGTTTTCTACAG+AGG | + | chr6_4:75213842-75213861 | Msa0996670:CDS | 30.0% |
! | GGTTTTGCAGAATGAAAATT+GGG | + | chr6_4:75214004-75214023 | Msa0996670:intron | 30.0% |
!! | GGTTGTTTTCTATGATTTCT+TGG | + | chr6_4:75214097-75214116 | Msa0996670:CDS | 30.0% |
ATCCAATTCATTTGTGATTG+AGG | - | chr6_4:75214153-75214172 | None:intergenic | 30.0% | |
TTGGATGAACATGAAAATGA+AGG | + | chr6_4:75214167-75214186 | Msa0996670:CDS | 30.0% | |
! | AAGAAAGGTACATATATACC+AGG | - | chr6_4:75213507-75213526 | None:intergenic | 30.0% |
!! | TGTTGTTCTTTTAGGTGATA+TGG | + | chr6_4:75213670-75213689 | Msa0996670:intron | 30.0% |
!!! | AAAACTCTTGTTTTCTACAG+AGG | + | chr6_4:75213842-75213861 | Msa0996670:CDS | 30.0% |
! | GGTTTTGCAGAATGAAAATT+GGG | + | chr6_4:75214004-75214023 | Msa0996670:intron | 30.0% |
!! | GGTTGTTTTCTATGATTTCT+TGG | + | chr6_4:75214097-75214116 | Msa0996670:CDS | 30.0% |
ATCCAATTCATTTGTGATTG+AGG | - | chr6_4:75214153-75214172 | None:intergenic | 30.0% | |
TTGGATGAACATGAAAATGA+AGG | + | chr6_4:75214167-75214186 | Msa0996670:CDS | 30.0% | |
CTTCATCTGTTGGATGAAAA+CGG | - | chr6_4:75213389-75213408 | None:intergenic | 35.0% | |
ACAACAAGTTCTTCATCTGT+TGG | - | chr6_4:75213399-75213418 | None:intergenic | 35.0% | |
TGTTCAATACTTGAAGCGTA+AGG | + | chr6_4:75213416-75213435 | Msa0996670:CDS | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | - | chr6_4:75213460-75213479 | None:intergenic | 35.0% | |
TATATACCAGGTAAATCCCA+AGG | - | chr6_4:75213495-75213514 | None:intergenic | 35.0% | |
CTACTACAAACAATGTCATG+TGG | + | chr6_4:75213632-75213651 | Msa0996670:intron | 35.0% | |
!! | TGAGTGTGTGTTGTTCTTTT+AGG | + | chr6_4:75213662-75213681 | Msa0996670:intron | 35.0% |
AAAGAAGCCAAGTATCCAAA+TGG | + | chr6_4:75213719-75213738 | Msa0996670:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | + | chr6_4:75213720-75213739 | Msa0996670:CDS | 35.0% | |
! | AGTTTGTAGCTCTGTTAGAT+CGG | - | chr6_4:75213748-75213767 | None:intergenic | 35.0% |
TCAAAGACTCATGAAGTTGT+TGG | + | chr6_4:75213812-75213831 | Msa0996670:CDS | 35.0% | |
AAGAAAGAAAGACTGACCAA+GGG | - | chr6_4:75213938-75213957 | None:intergenic | 35.0% | |
! | GGGTTTTGCAGAATGAAAAT+TGG | + | chr6_4:75214003-75214022 | Msa0996670:intron | 35.0% |
CAATTCATTTGTGATTGAGG+AGG | - | chr6_4:75214150-75214169 | None:intergenic | 35.0% | |
CTCCTCAATCACAAATGAAT+TGG | + | chr6_4:75214148-75214167 | Msa0996670:CDS | 35.0% | |
CTTCATCTGTTGGATGAAAA+CGG | - | chr6_4:75213389-75213408 | None:intergenic | 35.0% | |
ACAACAAGTTCTTCATCTGT+TGG | - | chr6_4:75213399-75213418 | None:intergenic | 35.0% | |
TGTTCAATACTTGAAGCGTA+AGG | + | chr6_4:75213416-75213435 | Msa0996670:CDS | 35.0% | |
AAGATCAACTTCAGGAATGA+TGG | - | chr6_4:75213460-75213479 | None:intergenic | 35.0% | |
TATATACCAGGTAAATCCCA+AGG | - | chr6_4:75213495-75213514 | None:intergenic | 35.0% | |
CTACTACAAACAATGTCATG+TGG | + | chr6_4:75213632-75213651 | Msa0996670:intron | 35.0% | |
!! | TGAGTGTGTGTTGTTCTTTT+AGG | + | chr6_4:75213662-75213681 | Msa0996670:intron | 35.0% |
AAAGAAGCCAAGTATCCAAA+TGG | + | chr6_4:75213719-75213738 | Msa0996670:CDS | 35.0% | |
AAGAAGCCAAGTATCCAAAT+GGG | + | chr6_4:75213720-75213739 | Msa0996670:CDS | 35.0% | |
! | AGTTTGTAGCTCTGTTAGAT+CGG | - | chr6_4:75213748-75213767 | None:intergenic | 35.0% |
TCAAAGACTCATGAAGTTGT+TGG | + | chr6_4:75213812-75213831 | Msa0996670:CDS | 35.0% | |
AAGAAAGAAAGACTGACCAA+GGG | - | chr6_4:75213938-75213957 | None:intergenic | 35.0% | |
! | GGGTTTTGCAGAATGAAAAT+TGG | + | chr6_4:75214003-75214022 | Msa0996670:intron | 35.0% |
CAATTCATTTGTGATTGAGG+AGG | - | chr6_4:75214150-75214169 | None:intergenic | 35.0% | |
CTCCTCAATCACAAATGAAT+TGG | + | chr6_4:75214148-75214167 | Msa0996670:CDS | 35.0% | |
GACTTGCAAAGATCAACTTC+AGG | - | chr6_4:75213468-75213487 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+TGG | + | chr6_4:75213475-75213494 | Msa0996670:CDS | 40.0% | |
TCTTTGCAAGTCTGATCCTT+GGG | + | chr6_4:75213476-75213495 | Msa0996670:CDS | 40.0% | |
TGAAGCACAGACACAAACAT+CGG | + | chr6_4:75213559-75213578 | Msa0996670:intron | 40.0% | |
ACACTGACACATTCAGACAT+CGG | + | chr6_4:75213593-75213612 | Msa0996670:intron | 40.0% | |
TAGGTGATATGGAACAAGAG+AGG | + | chr6_4:75213681-75213700 | Msa0996670:intron | 40.0% | |
TCTAACAGAGCTACAAACTC+TGG | + | chr6_4:75213749-75213768 | Msa0996670:CDS | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | + | chr6_4:75213772-75213791 | Msa0996670:CDS | 40.0% | |
ATGCATGATCCAATCAGTTC+TGG | - | chr6_4:75213885-75213904 | None:intergenic | 40.0% | |
AGAAAGAAAGACTGACCAAG+GGG | - | chr6_4:75213937-75213956 | None:intergenic | 40.0% | |
GAAGAAAGAAAGACTGACCA+AGG | - | chr6_4:75213939-75213958 | None:intergenic | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | + | chr6_4:75214030-75214049 | Msa0996670:CDS | 40.0% |
TTCATTTGTGATTGAGGAGG+AGG | - | chr6_4:75214147-75214166 | None:intergenic | 40.0% | |
GACTTGCAAAGATCAACTTC+AGG | - | chr6_4:75213468-75213487 | None:intergenic | 40.0% | |
ATCTTTGCAAGTCTGATCCT+TGG | + | chr6_4:75213475-75213494 | Msa0996670:CDS | 40.0% | |
TCTTTGCAAGTCTGATCCTT+GGG | + | chr6_4:75213476-75213495 | Msa0996670:CDS | 40.0% | |
TGAAGCACAGACACAAACAT+CGG | + | chr6_4:75213559-75213578 | Msa0996670:intron | 40.0% | |
ACACTGACACATTCAGACAT+CGG | + | chr6_4:75213593-75213612 | Msa0996670:intron | 40.0% | |
TAGGTGATATGGAACAAGAG+AGG | + | chr6_4:75213681-75213700 | Msa0996670:intron | 40.0% | |
TCTAACAGAGCTACAAACTC+TGG | + | chr6_4:75213749-75213768 | Msa0996670:CDS | 40.0% | |
TTACTGGAAAGCAACTGGTT+TGG | + | chr6_4:75213772-75213791 | Msa0996670:CDS | 40.0% | |
ATGCATGATCCAATCAGTTC+TGG | - | chr6_4:75213885-75213904 | None:intergenic | 40.0% | |
AGAAAGAAAGACTGACCAAG+GGG | - | chr6_4:75213937-75213956 | None:intergenic | 40.0% | |
GAAGAAAGAAAGACTGACCA+AGG | - | chr6_4:75213939-75213958 | None:intergenic | 40.0% | |
! | TGTGTCGCATATTTCTGAAG+AGG | + | chr6_4:75214030-75214049 | Msa0996670:CDS | 40.0% |
TTCATTTGTGATTGAGGAGG+AGG | - | chr6_4:75214147-75214166 | None:intergenic | 40.0% | |
GTTGGATGAAAACGGAAACC+TGG | - | chr6_4:75213381-75213400 | None:intergenic | 45.0% | |
! | ACTTCAGGAATGATGGAAGC+AGG | - | chr6_4:75213453-75213472 | None:intergenic | 45.0% |
TCTGATCCTTGGGATTTACC+TGG | + | chr6_4:75213486-75213505 | Msa0996670:CDS | 45.0% | |
CACAAACATCGGACACAACA+TGG | + | chr6_4:75213570-75213589 | Msa0996670:intron | 45.0% | |
TCGGTTCCCATTTGGATACT+TGG | - | chr6_4:75213729-75213748 | None:intergenic | 45.0% | |
! | CTGTTAGATCGGTTCCCATT+TGG | - | chr6_4:75213737-75213756 | None:intergenic | 45.0% |
GAGCTACAAACTCTGGTTAC+TGG | + | chr6_4:75213756-75213775 | Msa0996670:CDS | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | + | chr6_4:75213767-75213786 | Msa0996670:CDS | 45.0% | |
!! | CAATCAGTTCTGGAACCATG+AGG | - | chr6_4:75213875-75213894 | None:intergenic | 45.0% |
CTCATGGTTCCAGAACTGAT+TGG | + | chr6_4:75213873-75213892 | Msa0996670:CDS | 45.0% | |
! | CGCATATTTCTGAAGAGGAG+AGG | + | chr6_4:75214035-75214054 | Msa0996670:CDS | 45.0% |
! | ATTTCTGAAGAGGAGAGGTG+AGG | + | chr6_4:75214040-75214059 | Msa0996670:CDS | 45.0% |
! | CTCAGCTTCAAGTTCGAAAG+TGG | + | chr6_4:75214076-75214095 | Msa0996670:CDS | 45.0% |
GTTGGATGAAAACGGAAACC+TGG | - | chr6_4:75213381-75213400 | None:intergenic | 45.0% | |
! | ACTTCAGGAATGATGGAAGC+AGG | - | chr6_4:75213453-75213472 | None:intergenic | 45.0% |
TCTGATCCTTGGGATTTACC+TGG | + | chr6_4:75213486-75213505 | Msa0996670:CDS | 45.0% | |
CACAAACATCGGACACAACA+TGG | + | chr6_4:75213570-75213589 | Msa0996670:intron | 45.0% | |
TCGGTTCCCATTTGGATACT+TGG | - | chr6_4:75213729-75213748 | None:intergenic | 45.0% | |
! | CTGTTAGATCGGTTCCCATT+TGG | - | chr6_4:75213737-75213756 | None:intergenic | 45.0% |
GAGCTACAAACTCTGGTTAC+TGG | + | chr6_4:75213756-75213775 | Msa0996670:CDS | 45.0% | |
TCTGGTTACTGGAAAGCAAC+TGG | + | chr6_4:75213767-75213786 | Msa0996670:CDS | 45.0% | |
!! | CAATCAGTTCTGGAACCATG+AGG | - | chr6_4:75213875-75213894 | None:intergenic | 45.0% |
CTCATGGTTCCAGAACTGAT+TGG | + | chr6_4:75213873-75213892 | Msa0996670:CDS | 45.0% | |
! | CGCATATTTCTGAAGAGGAG+AGG | + | chr6_4:75214035-75214054 | Msa0996670:CDS | 45.0% |
! | ATTTCTGAAGAGGAGAGGTG+AGG | + | chr6_4:75214040-75214059 | Msa0996670:CDS | 45.0% |
! | CTCAGCTTCAAGTTCGAAAG+TGG | + | chr6_4:75214076-75214095 | Msa0996670:CDS | 45.0% |
GGATGAAAACGGAAACCTGG+TGG | - | chr6_4:75213378-75213397 | None:intergenic | 50.0% | |
TACAGAGGCAAACCACCTCA+TGG | + | chr6_4:75213857-75213876 | Msa0996670:CDS | 50.0% | |
!! | TCAGTTCTGGAACCATGAGG+TGG | - | chr6_4:75213872-75213891 | None:intergenic | 50.0% |
AGAAAGACTGACCAAGGGGT+TGG | - | chr6_4:75213933-75213952 | None:intergenic | 50.0% | |
GGATGAAAACGGAAACCTGG+TGG | - | chr6_4:75213378-75213397 | None:intergenic | 50.0% | |
TACAGAGGCAAACCACCTCA+TGG | + | chr6_4:75213857-75213876 | Msa0996670:CDS | 50.0% | |
!! | TCAGTTCTGGAACCATGAGG+TGG | - | chr6_4:75213872-75213891 | None:intergenic | 50.0% |
AGAAAGACTGACCAAGGGGT+TGG | - | chr6_4:75213933-75213952 | None:intergenic | 50.0% | |
GGTGAAGTGAGATTGCCACC+AGG | + | chr6_4:75213360-75213379 | Msa0996670:CDS | 55.0% | |
GGTTGGAGTGAGAGGAAGTG+AGG | - | chr6_4:75213916-75213935 | None:intergenic | 55.0% | |
TTCCTCTCACTCCAACCCCT+TGG | + | chr6_4:75213919-75213938 | Msa0996670:CDS | 55.0% | |
GGTGAAGTGAGATTGCCACC+AGG | + | chr6_4:75213360-75213379 | Msa0996670:CDS | 55.0% | |
GGTTGGAGTGAGAGGAAGTG+AGG | - | chr6_4:75213916-75213935 | None:intergenic | 55.0% | |
TTCCTCTCACTCCAACCCCT+TGG | + | chr6_4:75213919-75213938 | Msa0996670:CDS | 55.0% | |
GACCAAGGGGTTGGAGTGAG+AGG | - | chr6_4:75213924-75213943 | None:intergenic | 60.0% | |
GACCAAGGGGTTGGAGTGAG+AGG | - | chr6_4:75213924-75213943 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 75213333 | 75214199 | 75213333 | ID=Msa0996670;Name=Msa0996670 |
chr6_4 | mRNA | 75213333 | 75214199 | 75213333 | ID=Msa0996670-mRNA-1;Parent=Msa0996670;Name=Msa0996670-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|205 |
chr6_4 | exon | 75213333 | 75213507 | 75213333 | ID=Msa0996670-mRNA-1:exon:14045;Parent=Msa0996670-mRNA-1 |
chr6_4 | exon | 75213684 | 75213940 | 75213684 | ID=Msa0996670-mRNA-1:exon:14046;Parent=Msa0996670-mRNA-1 |
chr6_4 | exon | 75214014 | 75214199 | 75214014 | ID=Msa0996670-mRNA-1:exon:14047;Parent=Msa0996670-mRNA-1 |
chr6_4 | CDS | 75213333 | 75213507 | 75213333 | ID=Msa0996670-mRNA-1:cds;Parent=Msa0996670-mRNA-1 |
chr6_4 | CDS | 75213684 | 75213940 | 75213684 | ID=Msa0996670-mRNA-1:cds;Parent=Msa0996670-mRNA-1 |
chr6_4 | CDS | 75214014 | 75214199 | 75214014 | ID=Msa0996670-mRNA-1:cds;Parent=Msa0996670-mRNA-1 |
Gene Sequence |
Protein sequence |