AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0997680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0997680 MtrunA17_Chr7g0214071 89.130 92 8 2 122 211 94 185 2.03e-50 168
Msa0997680 MtrunA17_Chr7g0243371 88.889 54 6 0 122 175 46 99 3.07e-28 105
Msa0997680 MtrunA17_Chr1g0183741 34.132 167 82 8 80 235 54 203 1.53e-18 84.0
Msa0997680 MtrunA17_Chr5g0405211 40.566 106 58 3 103 205 72 175 5.23e-18 83.6
Msa0997680 MtrunA17_Chr4g0017921 40.336 119 57 5 103 210 72 187 4.79e-17 80.9
Msa0997680 MtrunA17_Chr7g0261411 53.125 64 29 1 122 185 92 154 6.58e-17 79.7
Msa0997680 MtrunA17_Chr1g0147421 52.055 73 34 1 122 193 110 182 1.50e-16 79.3
Msa0997680 MtrunA17_Chr8g0385991 46.512 86 38 2 122 199 94 179 1.86e-16 77.4
Msa0997680 MtrunA17_Chr4g0018391 44.944 89 44 3 103 188 71 157 3.85e-16 78.2
Msa0997680 MtrunA17_Chr1g0200561 45.918 98 48 4 103 197 83 178 4.11e-16 78.2
Msa0997680 MtrunA17_Chr3g0139331 49.315 73 36 1 122 193 93 165 5.37e-16 77.8
Msa0997680 MtrunA17_Chr2g0309331 38.053 113 53 4 105 209 86 189 1.13e-15 76.6
Msa0997680 MtrunA17_Chr8g0372121 43.820 89 45 3 103 188 70 156 1.30e-15 76.3
Msa0997680 MtrunA17_Chr4g0052061 69.091 55 14 1 3 57 100 151 3.11e-15 72.0
Msa0997680 MtrunA17_Chr4g0052061 57.333 75 24 1 256 322 65 139 3.69e-15 72.0
Msa0997680 MtrunA17_Chr5g0398971 44.444 90 45 4 103 188 71 159 3.56e-15 75.5
Msa0997680 MtrunA17_Chr8g0346001 46.914 81 29 2 120 188 98 176 4.11e-15 75.5
Msa0997680 MtrunA17_Chr3g0109821 51.163 86 35 4 122 202 90 173 5.84e-15 75.5
Msa0997680 MtrunA17_Chr2g0309891 47.727 88 38 4 122 203 90 175 1.07e-14 73.9
Msa0997680 MtrunA17_Chr4g0056541 30.769 182 110 6 103 281 71 239 1.29e-14 73.9
Msa0997680 MtrunA17_Chr7g0263931 36.134 119 62 4 122 227 93 210 1.77e-14 73.2
Msa0997680 MtrunA17_Chr2g0312321 45.833 72 33 2 122 189 91 160 1.82e-14 72.8
Msa0997680 MtrunA17_Chr3g0131911 49.254 67 25 1 138 195 112 178 2.02e-14 71.6
Msa0997680 MtrunA17_Chr6g0461661 39.785 93 49 2 102 187 78 170 2.06e-14 73.2
Msa0997680 MtrunA17_Chr4g0060931 48.052 77 33 3 122 193 99 173 2.18e-14 73.2
Msa0997680 MtrunA17_Chr4g0047841 36.957 138 49 5 80 187 59 188 2.25e-14 72.8
Msa0997680 MtrunA17_Chr4g0042561 48.052 77 31 3 122 191 91 165 3.03e-14 71.6
Msa0997680 MtrunA17_Chr3g0144271 50.769 65 28 1 122 186 106 166 3.19e-14 72.8
Msa0997680 MtrunA17_Chr2g0316971 46.667 75 35 1 122 191 105 179 3.44e-14 72.8
Msa0997680 MtrunA17_Chr5g0417001 41.176 85 39 1 120 193 94 178 7.01e-14 71.6
Msa0997680 MtrunA17_Chr1g0197361 44.872 78 39 2 122 197 93 168 9.94e-14 71.6
Msa0997680 MtrunA17_Chr8g0361731 41.860 86 38 2 120 193 94 179 1.15e-13 71.2
Msa0997680 MtrunA17_Chr3g0092671 39.796 98 47 3 102 197 78 165 2.77e-13 70.5
Msa0997680 MtrunA17_Chr2g0318101 37.302 126 53 5 80 187 59 176 3.04e-13 69.7
Msa0997680 MtrunA17_Chr5g0417791 45.946 74 31 2 122 188 85 156 5.48e-13 67.8
Msa0997680 MtrunA17_Chr6g0484441 35.514 107 62 3 122 227 87 187 5.65e-13 68.6
Msa0997680 MtrunA17_Chr7g0252971 41.237 97 39 5 122 201 90 185 6.26e-13 68.6
Msa0997680 MtrunA17_Chr6g0453451 39.394 99 51 3 102 193 80 176 6.76e-13 68.6
Msa0997680 MtrunA17_Chr1g0201021 38.235 102 54 4 102 197 81 179 9.05e-13 68.9
Msa0997680 MtrunA17_Chr3g0091921 45.455 77 35 2 122 193 98 172 1.10e-12 67.4
Msa0997680 MtrunA17_Chr3g0113001 47.436 78 33 3 122 193 47 122 1.29e-12 67.4
Msa0997680 MtrunA17_Chr2g0318081 48.000 75 34 2 122 193 98 170 1.46e-12 67.8
Msa0997680 MtrunA17_Chr5g0428991 50.000 70 30 2 122 188 109 176 1.85e-12 68.2
Msa0997680 MtrunA17_Chr2g0326361 44.286 70 32 1 122 184 96 165 1.88e-12 67.0
Msa0997680 MtrunA17_Chr8g0384201 38.272 81 45 2 120 197 88 166 2.09e-12 67.8
Msa0997680 MtrunA17_Chr8g0364791 38.272 81 45 2 120 197 88 166 3.73e-12 66.6
Msa0997680 MtrunA17_Chr5g0433781 50.725 69 29 4 122 187 90 156 4.01e-12 67.0
Msa0997680 MtrunA17_Chr3g0113031 43.902 82 31 3 122 193 22 98 4.46e-12 65.5
Msa0997680 MtrunA17_Chr4g0038751 40.698 86 46 3 105 187 78 161 6.18e-12 65.5
Msa0997680 MtrunA17_Chr6g0481091 43.038 79 39 3 122 197 90 165 9.56e-12 63.9
Msa0997680 MtrunA17_Chr3g0130101 43.902 82 41 3 122 200 91 170 1.28e-11 64.7
Msa0997680 MtrunA17_Chr3g0128111 39.560 91 48 3 102 187 104 192 1.29e-11 63.9
Msa0997680 MtrunA17_Chr8g0384721 50.000 74 27 3 122 188 89 159 1.55e-11 63.9
Msa0997680 MtrunA17_Chr3g0128151 41.758 91 46 3 102 187 84 172 1.71e-11 65.1
Msa0997680 MtrunA17_Chr7g0253011 40.000 95 48 4 102 187 77 171 2.56e-11 63.9
Msa0997680 MtrunA17_Chr7g0217721 38.889 90 35 2 122 193 101 188 3.89e-11 63.2
Msa0997680 MtrunA17_Chr8g0359921 48.052 77 33 4 122 193 96 170 4.66e-11 62.8
Msa0997680 MtrunA17_Chr5g0442771 44.304 79 31 4 120 185 98 176 5.16e-11 62.8
Msa0997680 MtrunA17_Chr3g0124761 36.207 116 59 5 80 188 51 158 6.71e-11 62.0
Msa0997680 MtrunA17_Chr3g0130731 47.945 73 29 3 122 188 89 158 7.87e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0997680 AT5G13180.1 62.667 75 26 1 122 194 93 167 9.99e-26 103
Msa0997680 AT2G33480.3 51.613 93 35 3 103 192 23 108 8.26e-23 94.7
Msa0997680 AT2G33480.2 52.747 91 35 3 103 192 80 163 3.54e-22 94.4
Msa0997680 AT2G33480.1 51.613 93 35 3 103 192 80 165 7.90e-22 93.2
Msa0997680 AT1G33280.1 46.591 88 43 2 103 188 72 157 1.26e-18 85.1
Msa0997680 AT4G10350.2 48.352 91 40 4 103 188 26 114 1.82e-18 84.3
Msa0997680 AT4G10350.1 48.352 91 40 4 103 188 73 161 3.31e-18 84.3
Msa0997680 AT2G18060.3 47.959 98 45 5 103 196 73 168 1.44e-17 82.8
Msa0997680 AT2G18060.1 47.959 98 45 5 103 196 73 168 1.44e-17 82.8
Msa0997680 AT2G24430.2 52.703 74 33 1 122 193 98 171 1.53e-17 82.0
Msa0997680 AT2G24430.1 52.703 74 33 1 122 193 98 171 1.53e-17 82.0
Msa0997680 AT4G36160.2 45.455 99 47 4 103 196 78 174 3.40e-17 82.0
Msa0997680 AT4G36160.1 45.455 99 47 4 103 196 74 170 3.64e-17 81.6
Msa0997680 AT4G36160.3 45.455 99 47 4 103 196 74 170 3.64e-17 81.6
Msa0997680 AT2G18060.2 53.165 79 33 4 120 196 4 80 5.71e-17 80.1
Msa0997680 AT4G28530.1 40.351 114 55 4 80 189 70 174 7.73e-17 80.5
Msa0997680 AT5G61430.2 51.948 77 30 3 122 193 35 109 3.21e-16 77.8
Msa0997680 AT5G07680.1 46.535 101 41 5 102 193 77 173 4.89e-16 78.2
Msa0997680 AT5G07680.2 46.535 101 41 5 102 193 63 159 5.46e-16 77.8
Msa0997680 AT5G61430.1 51.948 77 30 3 122 193 98 172 6.17e-16 77.8
Msa0997680 AT1G12260.2 42.553 94 49 3 103 193 71 162 1.10e-15 77.0
Msa0997680 AT5G62380.2 43.878 98 51 3 120 215 90 185 1.13e-15 77.0
Msa0997680 AT5G62380.1 43.878 98 51 3 120 215 90 185 1.13e-15 77.0
Msa0997680 AT5G66300.1 46.154 91 41 4 103 188 76 163 1.46e-15 76.3
Msa0997680 AT1G12260.1 42.553 94 49 3 103 193 71 162 1.63e-15 77.0
Msa0997680 AT1G62700.1 44.944 89 44 3 103 188 71 157 1.77e-15 77.0
Msa0997680 AT1G62700.2 44.944 89 44 3 103 188 71 157 1.77e-15 77.0
Msa0997680 AT1G76420.1 43.478 92 41 3 105 194 95 177 1.85e-15 76.3
Msa0997680 AT3G12977.2 50.667 75 31 3 122 192 47 119 2.92e-15 74.3
Msa0997680 AT1G71930.2 44.318 88 44 3 103 187 73 158 6.11e-15 74.7
Msa0997680 AT1G71930.1 44.318 88 44 3 103 187 73 158 6.11e-15 74.7
Msa0997680 AT3G15170.1 50.704 71 30 2 122 187 102 172 7.19e-15 74.3
Msa0997680 AT3G12977.1 50.667 75 31 3 122 192 100 172 9.01e-15 73.9
Msa0997680 AT5G39610.1 46.753 77 34 2 122 193 102 176 9.73e-15 73.9
Msa0997680 AT1G56010.1 46.053 76 33 2 122 191 35 108 1.38e-14 72.8
Msa0997680 AT3G18400.1 50.000 74 33 3 122 193 87 158 1.95e-14 73.2
Msa0997680 AT3G10500.1 45.570 79 38 2 122 197 93 169 2.15e-14 74.3
Msa0997680 AT1G79580.3 47.826 69 35 1 120 188 100 167 2.27e-14 73.6
Msa0997680 AT1G79580.5 47.826 69 35 1 120 188 100 167 2.27e-14 73.6
Msa0997680 AT1G79580.4 47.826 69 35 1 120 188 100 167 2.27e-14 73.6
Msa0997680 AT1G79580.2 47.826 69 35 1 120 188 100 167 2.27e-14 73.6
Msa0997680 AT1G79580.1 47.826 69 35 1 120 188 100 167 2.27e-14 73.6
Msa0997680 AT1G56010.2 45.455 77 34 2 122 192 102 176 2.31e-14 73.2
Msa0997680 AT5G04410.1 46.835 79 37 2 122 197 93 169 3.05e-14 73.9
Msa0997680 AT1G69490.1 43.750 96 36 4 105 193 82 166 5.14e-14 71.2
Msa0997680 AT4G27410.2 42.857 91 47 3 122 209 96 184 5.24e-14 71.6
Msa0997680 AT4G27410.3 42.857 91 47 3 122 209 113 201 6.21e-14 71.6
Msa0997680 AT5G18270.2 43.011 93 45 3 102 187 81 172 1.03e-13 71.2
Msa0997680 AT5G18270.1 43.011 93 45 3 102 187 81 172 1.05e-13 71.2
Msa0997680 AT1G33060.1 45.055 91 43 3 102 187 86 174 1.34e-13 72.0
Msa0997680 AT3G04060.1 38.017 121 61 5 74 187 58 171 1.43e-13 70.9
Msa0997680 AT1G33060.2 45.055 91 43 3 102 187 86 174 1.45e-13 71.6
Msa0997680 AT2G46770.1 39.423 104 43 3 103 188 80 181 2.25e-13 70.5
Msa0997680 AT3G61910.1 32.530 166 83 7 103 242 75 237 3.01e-13 70.1
Msa0997680 AT4G35580.2 49.383 81 33 3 122 196 93 171 3.14e-13 70.5
Msa0997680 AT5G53950.1 46.479 71 33 1 122 187 99 169 3.17e-13 70.1
Msa0997680 AT1G65910.1 43.333 90 45 4 122 208 90 176 3.18e-13 70.9
Msa0997680 AT4G35580.3 49.383 81 33 3 122 196 93 171 3.19e-13 70.5
Msa0997680 AT3G15510.1 37.302 126 53 5 80 187 61 178 3.33e-13 70.1
Msa0997680 AT4G35580.1 49.383 81 33 3 122 196 93 171 3.73e-13 70.5
Msa0997680 AT1G61110.1 39.370 127 49 6 80 187 60 177 4.07e-13 69.3
Msa0997680 AT1G77450.1 43.820 89 41 2 122 204 92 177 5.33e-13 68.2
Msa0997680 AT1G32770.1 38.614 101 45 4 103 188 80 178 6.03e-13 69.3
Msa0997680 AT3G49530.1 41.489 94 49 3 99 187 72 164 6.72e-13 69.7
Msa0997680 AT3G49530.2 41.489 94 49 3 99 187 72 164 8.29e-13 68.9
Msa0997680 AT5G08790.1 39.831 118 54 5 80 188 51 160 1.16e-12 67.8
Msa0997680 AT5G24590.2 38.525 122 58 5 99 208 72 188 1.21e-12 68.6
Msa0997680 AT3G10480.1 44.872 78 37 2 122 195 111 186 1.86e-12 68.2
Msa0997680 AT3G10480.3 44.872 78 37 2 122 195 144 219 1.98e-12 68.2
Msa0997680 AT5G63790.1 50.667 75 26 3 122 188 132 203 2.85e-12 67.0
Msa0997680 AT5G63790.2 38.983 118 55 5 80 188 104 213 3.17e-12 66.6
Msa0997680 AT3G10490.4 44.872 78 37 2 122 195 11 86 3.43e-12 67.0
Msa0997680 AT3G10490.3 44.872 78 37 2 122 195 11 86 3.43e-12 67.0
Msa0997680 AT2G17040.1 47.761 67 32 2 122 187 88 152 4.42e-12 65.9
Msa0997680 AT3G10490.2 44.872 78 37 2 122 195 111 186 5.71e-12 66.6
Msa0997680 AT3G10490.1 44.872 78 37 2 122 195 111 186 6.01e-12 65.1
Msa0997680 AT5G17260.1 45.714 70 32 2 122 187 90 157 6.08e-12 66.6
Msa0997680 AT3G04070.2 48.101 79 28 3 122 187 92 170 6.60e-12 65.9
Msa0997680 AT3G17730.1 44.928 69 33 3 122 187 90 156 7.57e-12 64.7
Msa0997680 AT5G46590.1 47.143 70 32 2 122 187 90 158 7.63e-12 65.5
Msa0997680 AT1G54330.1 51.515 66 30 1 122 187 90 153 1.25e-11 64.7
Msa0997680 AT1G34190.1 45.679 81 35 4 122 197 100 176 1.31e-11 65.9
Msa0997680 AT3G03200.1 29.371 143 79 5 122 260 90 214 1.46e-11 65.5
Msa0997680 AT3G10480.2 44.156 77 38 2 122 195 111 185 1.83e-11 65.1
Msa0997680 AT1G01720.1 36.290 124 63 5 80 195 51 166 3.50e-11 63.5
Msa0997680 AT1G52890.1 45.333 75 36 2 122 193 96 168 3.52e-11 63.5
Msa0997680 AT3G15500.1 45.333 75 36 3 122 193 96 168 4.64e-11 63.2
Msa0997680 AT1G34180.4 42.500 80 39 3 122 197 112 188 9.20e-11 63.2
Msa0997680 AT3G04070.1 31.056 161 88 3 122 279 92 232 9.32e-11 62.8
Msa0997680 AT1G34180.3 42.500 80 39 3 122 197 100 176 9.51e-11 62.8
Msa0997680 AT3G29035.1 44.156 77 36 2 122 193 106 180 9.61e-11 62.4

Find 79 sgRNAs with CRISPR-Local

Find 685 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCTGATCTTGATTTAG+AGG 0.189952 6_4:+77723071 Msa0997680:CDS
ATCACCTTCTGCAGCATATA+AGG 0.276669 6_4:-77715488 None:intergenic
TCAAGATCAGCAGGGGATAT+AGG 0.280964 6_4:-77712957 None:intergenic
TCAAAGACTCGTGAAGTTCT+TGG 0.292891 6_4:+77716093 Msa0997680:CDS
AATTAGATTGAAATTCGATA+TGG 0.322148 6_4:-77715387 None:intergenic
CACCAAAAGTCGATATCATT+TGG 0.338130 6_4:-77719233 None:intergenic
CTCCACCTTCTTCGGCTCTT+CGG 0.339270 6_4:-77712913 None:intergenic
TCAACTTCCTCCACCTTCTT+CGG 0.340624 6_4:-77712921 None:intergenic
CAAGATCAGCAGGGGATATA+GGG 0.348556 6_4:-77712956 None:intergenic
CCAAGCAATGGCAGCAACTT+TGG 0.372882 6_4:+77716395 Msa0997680:CDS
TACCAAATGATATCGACTTT+TGG 0.376717 6_4:+77719231 Msa0997680:CDS
CCAAAGTTGCTGCCATTGCT+TGG 0.380478 6_4:-77716395 None:intergenic
ATCACCTTCTGCGGCACATA+AGG 0.413239 6_4:-77719339 None:intergenic
TTACTGGAAGGCAACTGGTT+TGG 0.413426 6_4:+77716053 Msa0997680:intron
GGTGATAGAGCCCCTACATC+TGG 0.413662 6_4:+77715449 Msa0997680:CDS
TCTGGTTACTGGAAGGCAAC+TGG 0.438388 6_4:+77716048 Msa0997680:intron
TGGTACTTCGTTGATTTGAT+TGG 0.447213 6_4:-77715363 None:intergenic
TGCAGAATGAAAATTGGGTT+CGG 0.450439 6_4:+77716306 Msa0997680:intron
TCTTCTAAATCAAGATCAGC+AGG 0.465286 6_4:-77712966 None:intergenic
ATGTATCAAAATATTCTTCG+TGG 0.472051 6_4:+77715329 Msa0997680:CDS
ATTACAAAGGTTTCTTCGAA+AGG 0.477350 6_4:-77713058 None:intergenic
TTGAATCGCATGTCCTTGAC+CGG 0.480974 6_4:+77715408 Msa0997680:CDS
TTCCTCTCACTCCAACCCCT+TGG 0.484311 6_4:+77716200 Msa0997680:CDS
TGATTTCGACCTCCAGATGT+AGG 0.487746 6_4:-77715461 None:intergenic
GATTTCGACCTCCAGATGTA+GGG 0.488511 6_4:-77715460 None:intergenic
GCAATGGCAGCAACTTTGGT+GGG 0.498697 6_4:+77716399 Msa0997680:CDS
TTATAACCAACGAGTGATGA+TGG 0.499645 6_4:+77715299 Msa0997680:intron
TTGAATATCCTGTCCTTGGA+CGG 0.499794 6_4:+77719259 Msa0997680:CDS
CGGGATTTGCTTGATTGTCA+TGG 0.511625 6_4:+77715428 Msa0997680:CDS
AGAAGAACTTCTAAAAGTGA+AGG 0.512360 6_4:+77712983 Msa0997680:CDS
GAAATTGAATATCCTGTCCT+TGG 0.514365 6_4:+77719255 Msa0997680:CDS
GGTTGGAGTGAGAGGAAGTG+AGG 0.514880 6_4:-77716194 None:intergenic
AGAGGAACTTCTAAAAGTGA+AGG 0.528038 6_4:+77723089 Msa0997680:CDS
AGCACAGCCCGTCCAAGGAC+AGG 0.529587 6_4:-77719267 None:intergenic
CGAAGAGCCGAAGAAGGTGG+AGG 0.542791 6_4:+77712914 Msa0997680:CDS
AATGGAGAAGAGACAGTGAA+AGG 0.546634 6_4:+77716365 Msa0997680:CDS
GACCAAGGGGTTGGAGTGAG+AGG 0.548262 6_4:-77716202 None:intergenic
CTCATGGTTCAAGAACTGAT+TGG 0.548704 6_4:+77716154 Msa0997680:CDS
AGAAAGACTGACCAAGGGGT+TGG 0.548887 6_4:-77716211 None:intergenic
AGCAATGGCAGCAACTTTGG+TGG 0.550936 6_4:+77716398 Msa0997680:CDS
AAGGACAATTTGTATCATCA+AGG 0.551816 6_4:+77722965 Msa0997680:CDS
TGAATATCCTGTCCTTGGAC+GGG 0.552662 6_4:+77719260 Msa0997680:CDS
ACCTCCTTATGTGCCGCAGA+AGG 0.556745 6_4:+77719335 Msa0997680:CDS
AGATTGAAATTCGATATGGT+TGG 0.559500 6_4:-77715383 None:intergenic
AAGCATCAACATACTCAAGA+AGG 0.561268 6_4:+77723014 Msa0997680:CDS
CATAAGGAGGTTGAATTCGA+TGG 0.566831 6_4:-77719323 None:intergenic
CTCTAAATCAAGATCAGCAA+GGG 0.577150 6_4:-77723070 None:intergenic
ACCTTCTGCGGCACATAAGG+AGG 0.580778 6_4:-77719336 None:intergenic
AAAGGAGTGAAGCCAAGCAA+TGG 0.582869 6_4:+77716383 Msa0997680:CDS
TTTGACCGAAGAGCCGAAGA+AGG 0.590908 6_4:+77712908 Msa0997680:CDS
AATCAAGCAAATCCCGGTCA+AGG 0.594214 6_4:-77715421 None:intergenic
ATACAAATTGTCCTTCATGA+AGG 0.597889 6_4:-77722957 None:intergenic
AATGAAGCACAGCCCGTCCA+AGG 0.600009 6_4:-77719272 None:intergenic
AAGGTGGAGGAAGTTGACAA+AGG 0.605500 6_4:+77712927 Msa0997680:CDS
AGAGCTAGATGCTGACATTG+AGG 0.606577 6_4:+77723122 Msa0997680:CDS
TGAATCGCATGTCCTTGACC+GGG 0.608592 6_4:+77715409 Msa0997680:CDS
TACAGAGGGAAACCACCTCA+TGG 0.609880 6_4:+77716138 Msa0997680:CDS
CGCATATTTCTGAAGAGGAG+AGG 0.611502 6_4:+77716332 Msa0997680:CDS
ACTTCCTTATATGCTGCAGA+AGG 0.614507 6_4:+77715484 Msa0997680:CDS
CAACATACTCAAGAAGGTGG+AGG 0.614880 6_4:+77723020 Msa0997680:CDS
TCAGTTCTTGAACCATGAGG+TGG 0.615010 6_4:-77716150 None:intergenic
CATGACAATCAAGCAAATCC+CGG 0.615198 6_4:-77715427 None:intergenic
GGTGTCGCATATTTCTGAAG+AGG 0.616757 6_4:+77716327 Msa0997680:CDS
CATCAACATACTCAAGAAGG+TGG 0.619975 6_4:+77723017 Msa0997680:CDS
GAAGGTGGAGGAAGTTGACA+AGG 0.620804 6_4:+77723032 Msa0997680:CDS
TTCTAAATCAAGATCAGCAG+GGG 0.625754 6_4:-77712964 None:intergenic
CCTCTAAATCAAGATCAGCA+AGG 0.626143 6_4:-77723071 None:intergenic
ATTTCGACCTCCAGATGTAG+GGG 0.626324 6_4:-77715459 None:intergenic
GACCGAAGAGCCGAAGAAGG+TGG 0.629635 6_4:+77712911 Msa0997680:CDS
GCTTCATTGAAAGAGCTCCA+TGG 0.633908 6_4:+77713005 Msa0997680:CDS
CAATGGCAGCAACTTTGGTG+GGG 0.637279 6_4:+77716400 Msa0997680:CDS
ACTGAAGAGTACCTTCATGA+AGG 0.637591 6_4:+77722946 Msa0997680:CDS
CTTCTAAATCAAGATCAGCA+GGG 0.641826 6_4:-77712965 None:intergenic
ACAGATAAAATCACCTTCTG+CGG 0.643856 6_4:-77719348 None:intergenic
GATAGAGCCCCTACATCTGG+AGG 0.660346 6_4:+77715452 Msa0997680:CDS
ATATTTCTGAAGAGGAGAGG+TGG 0.674268 6_4:+77716335 Msa0997680:CDS
TTGCTGCTTCGATGTCACCA+TGG 0.702747 6_4:-77713022 None:intergenic
CAATCAGTTCTTGAACCATG+AGG 0.707588 6_4:-77716153 None:intergenic
AAGGTGGAGGAAGTTGACAA+GGG 0.751441 6_4:+77723033 Msa0997680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAATATAATATAT+AGG + chr6_4:77717279-77717298 Msa0997680:intron 0.0%
!!! TTAATTTTTTTAAATACAGA+TGG + chr6_4:77713912-77713931 Msa0997680:intron 10.0%
!! ATAAATAAAAAAAGGTAATA+TGG + chr6_4:77714191-77714210 Msa0997680:intron 10.0%
!! TAATATTAATATGAATGAAT+TGG + chr6_4:77716279-77716298 Msa0997680:intron 10.0%
!! TAATTTATGTTATAAAACTA+AGG - chr6_4:77716733-77716752 None:intergenic 10.0%
!!! AATAAAAAATCGAATATTTT+TGG - chr6_4:77717470-77717489 None:intergenic 10.0%
!! TATAAATTTAAACAATTACA+TGG + chr6_4:77717799-77717818 Msa0997680:intron 10.0%
!! AAAACTAAAAATACAAAATA+TGG + chr6_4:77717995-77718014 Msa0997680:intron 10.0%
!!! TTTTTTAAAAGATAAAAACA+AGG + chr6_4:77719667-77719686 Msa0997680:intron 10.0%
!! TCTAAATTAAAACAATTATT+TGG + chr6_4:77720800-77720819 Msa0997680:intron 10.0%
!!! TATTTTATATTGTATAGAAT+TGG + chr6_4:77722463-77722482 Msa0997680:intron 10.0%
!!! ATTTTATATTGTATAGAATT+GGG + chr6_4:77722464-77722483 Msa0997680:intron 10.0%
!!! CAAATTTAAAATATCAAAAA+AGG + chr6_4:77724045-77724064 Msa0997680:intron 10.0%
!! CGTACAAAATAAATAAAAAA+AGG + chr6_4:77714183-77714202 Msa0997680:intron 15.0%
!! AGATGTTAAAGAATTTATTT+AGG + chr6_4:77714583-77714602 Msa0997680:intron 15.0%
!! GATGTTAAAGAATTTATTTA+GGG + chr6_4:77714584-77714603 Msa0997680:intron 15.0%
!! ATGTTAAAGAATTTATTTAG+GGG + chr6_4:77714585-77714604 Msa0997680:intron 15.0%
!!! GAAACATAATTTCTTTTTAT+TGG + chr6_4:77714607-77714626 Msa0997680:intron 15.0%
!!! TTTTCCTTATATTATTTCTA+TGG - chr6_4:77715241-77715260 None:intergenic 15.0%
!!! ATATTTTCATTATTTCATTG+CGG + chr6_4:77715588-77715607 Msa0997680:intron 15.0%
!! ATTGTTATGAATATTATAAG+TGG + chr6_4:77716485-77716504 Msa0997680:intron 15.0%
!! TTTGTACTTTCATATATTAT+AGG - chr6_4:77716762-77716781 None:intergenic 15.0%
!! CAAATACACAATAAAATAAT+AGG + chr6_4:77717158-77717177 Msa0997680:intron 15.0%
!!! TGTATTAAAATTTACTTTTG+CGG + chr6_4:77717361-77717380 Msa0997680:intron 15.0%
!!! ATTCGATTTTTTATTGTTTT+CGG + chr6_4:77717475-77717494 Msa0997680:intron 15.0%
!!! TCTTGAATTTTAAAATTTTC+CGG - chr6_4:77717924-77717943 None:intergenic 15.0%
!! TGATGTTAAAAAAGTTATTA+AGG + chr6_4:77718520-77718539 Msa0997680:intron 15.0%
!! GATGTTAAAAAAGTTATTAA+GGG + chr6_4:77718521-77718540 Msa0997680:intron 15.0%
!!! GGACAATTTAATTTTTTTAT+TGG + chr6_4:77718542-77718561 Msa0997680:intron 15.0%
!!! CAAAGTTTATATTATCTTTT+TGG - chr6_4:77718670-77718689 None:intergenic 15.0%
!!! GAATCTTATTTTCTATTATT+TGG - chr6_4:77719904-77719923 None:intergenic 15.0%
!! TTTCAAGAAATGAATAAAAT+TGG + chr6_4:77720127-77720146 Msa0997680:intron 15.0%
!!! TTAATTATTTTAAATCCAAG+TGG - chr6_4:77720489-77720508 None:intergenic 15.0%
!! ATGTTAAAGAATTTATTTAG+AGG + chr6_4:77714585-77714604 Msa0997680:intron 15.0%
!!! GAAACATAATATCTTTTTAT+TGG + chr6_4:77720922-77720941 Msa0997680:intron 15.0%
!!! TTTTCCATATATTATTTCTA+TGG - chr6_4:77721543-77721562 None:intergenic 15.0%
!! GAAGAATAATTTGATATATA+AGG - chr6_4:77721628-77721647 None:intergenic 15.0%
!!! TTCACTTATTTTCTATTATT+TGG - chr6_4:77722060-77722079 None:intergenic 15.0%
!!! ATCTAAAAATGATACATTTT+TGG - chr6_4:77722141-77722160 None:intergenic 15.0%
!! TATTCATTTCTTGAAAATTA+AGG - chr6_4:77722758-77722777 None:intergenic 15.0%
!!! TTTTCAAGAAATGAATAAAT+TGG + chr6_4:77722761-77722780 Msa0997680:intron 15.0%
!! ATTATACTTATGATTTGAAA+TGG + chr6_4:77722798-77722817 Msa0997680:intron 15.0%
!!! GTAATTAATTTTCATAACAT+TGG - chr6_4:77723594-77723613 None:intergenic 15.0%
!! TTTATCAGTGTATTTATATT+TGG - chr6_4:77723800-77723819 None:intergenic 15.0%
!! ATTATATAGATTTCTTTGCA+AGG - chr6_4:77713220-77713239 None:intergenic 20.0%
!! CAATGTCACTAAAAATAAAA+AGG - chr6_4:77713658-77713677 None:intergenic 20.0%
!!! CTTTTTATTTTTAGTGACAT+TGG + chr6_4:77713656-77713675 Msa0997680:intron 20.0%
!!! GATGGATTGAAAAAAATTAT+AGG + chr6_4:77713930-77713949 Msa0997680:intron 20.0%
!! AAAATGTTAATTGAGAGAAA+GGG - chr6_4:77714159-77714178 None:intergenic 20.0%
!! AGATTCACTCAATAAAATAA+AGG + chr6_4:77714295-77714314 Msa0997680:intron 20.0%
!!! GAAGAATATTTTGATACATA+TGG - chr6_4:77715328-77715347 None:intergenic 20.0%
!! AATTAGATTGAAATTCGATA+TGG - chr6_4:77715390-77715409 None:intergenic 20.0%
!! ACAAATTATGGTAGAAATAA+AGG - chr6_4:77715529-77715548 None:intergenic 20.0%
!! CAAAATCATTAGACAAATTA+TGG - chr6_4:77715541-77715560 None:intergenic 20.0%
!! TGTTATAAAACTAAGGAAAT+GGG - chr6_4:77716726-77716745 None:intergenic 20.0%
!! ATGTTATAAAACTAAGGAAA+TGG - chr6_4:77716727-77716746 None:intergenic 20.0%
!! CAAATTAAACAGCATATATT+TGG - chr6_4:77717078-77717097 None:intergenic 20.0%
!!! CAAATATATGCTGTTTAATT+TGG + chr6_4:77717076-77717095 Msa0997680:intron 20.0%
!!! TTTATTGTTTTCGGTTTTTT+TGG + chr6_4:77717484-77717503 Msa0997680:intron 20.0%
!! GATTAATATAGATGAATTCA+AGG - chr6_4:77717573-77717592 None:intergenic 20.0%
!! TTAAAATTCAAGATACGATA+CGG + chr6_4:77717931-77717950 Msa0997680:intron 20.0%
!! TAAAACTCAAGCAAAAAAAT+TGG + chr6_4:77718020-77718039 Msa0997680:intron 20.0%
!! CCTGATGTTTATATTATATT+TGG - chr6_4:77718285-77718304 None:intergenic 20.0%
!! CCAAATATAATATAAACATC+AGG + chr6_4:77718282-77718301 Msa0997680:intron 20.0%
!!! AGTTTATATTATCTTTTTGG+TGG - chr6_4:77718667-77718686 None:intergenic 20.0%
!!! TTCAAGAAGAGTTTTAAATT+TGG - chr6_4:77718985-77719004 None:intergenic 20.0%
!! GAAGAATAGTTTGATATATA+AGG - chr6_4:77719178-77719197 None:intergenic 20.0%
!! GAGCTATAAAAAAAATTCTT+AGG + chr6_4:77719797-77719816 Msa0997680:intron 20.0%
!!! TATCTAAAGATGATGATTTT+CGG - chr6_4:77719980-77719999 None:intergenic 20.0%
!!! AATGTTTTTTGTTTTCATTC+AGG - chr6_4:77720082-77720101 None:intergenic 20.0%
!! TATTCATTTCTTGAAAACTA+AGG - chr6_4:77720123-77720142 None:intergenic 20.0%
!!! TTTTACTGTATGATTTGAAA+TGG + chr6_4:77720165-77720184 Msa0997680:intron 20.0%
!!! GTGAAGATTCATAATTTTTT+GGG - chr6_4:77720607-77720626 None:intergenic 20.0%
!!! TGTGAAGATTCATAATTTTT+TGG - chr6_4:77720608-77720627 None:intergenic 20.0%
!!! TACAATTCTAAGATTTCTTA+TGG - chr6_4:77715186-77715205 None:intergenic 20.0%
!! ACAAATTATGGTAACAATAA+AGG - chr6_4:77721829-77721848 None:intergenic 20.0%
!! CAAAAACATTTGACAAATTA+TGG - chr6_4:77721841-77721860 None:intergenic 20.0%
!! TATTCATTTCTTGAAAACTA+AGG - chr6_4:77720123-77720142 None:intergenic 20.0%
!! AACTCTATCTAAAAATTTCA+AGG + chr6_4:77722559-77722578 Msa0997680:intron 20.0%
!! GAAATTTAACAATGAAACTT+AGG + chr6_4:77724003-77724022 Msa0997680:intron 20.0%
! AAGTTCTTCTAAATCAAGAT+CGG - chr6_4:77712973-77712992 None:intergenic 25.0%
! AATATATAGGTTTCTTTGCA+AGG - chr6_4:77713396-77713415 None:intergenic 25.0%
! TCAAGAGTAACATATAATTG+CGG + chr6_4:77713569-77713588 Msa0997680:intron 25.0%
!! TTGGCGTCTTTAAAAAAAAT+TGG - chr6_4:77713958-77713977 None:intergenic 25.0%
!! AAGTGCAATTTTCAAATTAG+AGG + chr6_4:77714047-77714066 Msa0997680:intron 25.0%
!! AGTGCAATTTTCAAATTAGA+GGG + chr6_4:77714048-77714067 Msa0997680:intron 25.0%
!!! GTTTTTAAAACTGACGATTT+TGG - chr6_4:77714075-77714094 None:intergenic 25.0%
!!! TCGTCAGTTTTAAAAACTTT+AGG + chr6_4:77714078-77714097 Msa0997680:intron 25.0%
!!! CGTCAGTTTTAAAAACTTTA+GGG + chr6_4:77714079-77714098 Msa0997680:intron 25.0%
!!! GTCAGTTTTAAAAACTTTAG+GGG + chr6_4:77714080-77714099 Msa0997680:intron 25.0%
!!! TCAGTTTTAAAAACTTTAGG+GGG + chr6_4:77714081-77714100 Msa0997680:intron 25.0%
! AAATGTTAATTGAGAGAAAG+GGG - chr6_4:77714158-77714177 None:intergenic 25.0%
! CAAAATGTTAATTGAGAGAA+AGG - chr6_4:77714160-77714179 None:intergenic 25.0%
! AATATGGAATACCAGTTTAT+AGG + chr6_4:77714207-77714226 Msa0997680:intron 25.0%
!! ATTTTATTGAGTGAATCTAG+TGG - chr6_4:77714293-77714312 None:intergenic 25.0%
! ATAAAGGTAACATATAGTAC+CGG + chr6_4:77714311-77714330 Msa0997680:intron 25.0%
! AGGTAAGTGGTTAAAAAAAT+AGG + chr6_4:77714339-77714358 Msa0997680:intron 25.0%
! GTTAAAAAAATAGGAATACG+TGG + chr6_4:77714348-77714367 Msa0997680:intron 25.0%
! AAACACACGCAAAAAAAATA+TGG - chr6_4:77714477-77714496 None:intergenic 25.0%
! TATTATATGCACCTCAAAAA+AGG + chr6_4:77714693-77714712 Msa0997680:intron 25.0%
!!! CCATTTTTAGTAAAATGTGA+AGG - chr6_4:77714731-77714750 None:intergenic 25.0%
!! CCTTCACATTTTACTAAAAA+TGG + chr6_4:77714728-77714747 Msa0997680:intron 25.0%
!! ACATTTTACTAAAAATGGAG+AGG + chr6_4:77714733-77714752 Msa0997680:intron 25.0%
!! CATTTTACTAAAAATGGAGA+GGG + chr6_4:77714734-77714753 Msa0997680:intron 25.0%
! CTTAATAAAGAGTTCAATGT+GGG - chr6_4:77714760-77714779 None:intergenic 25.0%
! TCTTAATAAAGAGTTCAATG+TGG - chr6_4:77714761-77714780 None:intergenic 25.0%
! TTTGTACATCGTTATTCTAA+AGG - chr6_4:77714863-77714882 None:intergenic 25.0%
!! ATCAGATTTAAAACACTTCT+TGG + chr6_4:77715045-77715064 Msa0997680:intron 25.0%
! AAACTTACTTGTGAAACAAT+GGG - chr6_4:77715116-77715135 None:intergenic 25.0%
! AAAACTTACTTGTGAAACAA+TGG - chr6_4:77715117-77715136 None:intergenic 25.0%
!!! CCTTATATTATTTCTATGGT+AGG - chr6_4:77715237-77715256 None:intergenic 25.0%
! CCTACCATAGAAATAATATA+AGG + chr6_4:77715234-77715253 Msa0997680:intron 25.0%
! ATGTATCAAAATATTCTTCG+TGG + chr6_4:77715329-77715348 Msa0997680:CDS 25.0%
!!! ATTGACATTTTTGTTGTTTC+TGG - chr6_4:77715809-77715828 None:intergenic 25.0%
! GATTTATTATGATCAATGCA+AGG - chr6_4:77715883-77715902 None:intergenic 25.0%
!! GATTTTGCAGAATGAAAATT+GGG + chr6_4:77716301-77716320 Msa0997680:intron 25.0%
! TGGATGTACATACAATAATT+GGG + chr6_4:77716505-77716524 Msa0997680:intron 25.0%
! ACATACAATAATTGGGTTAT+TGG + chr6_4:77716512-77716531 Msa0997680:intron 25.0%
! CATACAATAATTGGGTTATT+GGG + chr6_4:77716513-77716532 Msa0997680:intron 25.0%
! ATGAGTAATAATAATGTTCG+AGG + chr6_4:77716925-77716944 Msa0997680:intron 25.0%
!!! CACATGAATTTATTTTGGAT+CGG - chr6_4:77717008-77717027 None:intergenic 25.0%
! ATCCAAAATAAATTCATGTG+CGG + chr6_4:77717008-77717027 Msa0997680:intron 25.0%
!!! GTTTAATTTGGATCAGTTTT+TGG + chr6_4:77717088-77717107 Msa0997680:intron 25.0%
! AAAAATTACATGTTGCACTT+TGG - chr6_4:77717118-77717137 None:intergenic 25.0%
!!! TAAAATTTACTTTTGCGGTT+CGG + chr6_4:77717366-77717385 Msa0997680:intron 25.0%
! AAAATAGATTATTGAGAGAG+AGG - chr6_4:77717681-77717700 None:intergenic 25.0%
!!! GGTTGAACTTTTTTTATGTT+CGG + chr6_4:77717739-77717758 Msa0997680:intron 25.0%
!!! ATCGTTTTTCTATGTTTGTT+TGG - chr6_4:77718059-77718078 None:intergenic 25.0%
! ACAAACATAGAAAAACGATA+AGG + chr6_4:77718060-77718079 Msa0997680:intron 25.0%
!! GAAACTTTTCAAATACATCT+GGG - chr6_4:77718349-77718368 None:intergenic 25.0%
!! TGAAACTTTTCAAATACATC+TGG - chr6_4:77718350-77718369 None:intergenic 25.0%
! TTTAATATGCTCCTCAAAAA+AGG + chr6_4:77718627-77718646 Msa0997680:intron 25.0%
! TCATTCTTATCATTGATAAG+TGG - chr6_4:77718898-77718917 None:intergenic 25.0%
!!! AATGAAAATCCATCACTTTT+AGG + chr6_4:77718950-77718969 Msa0997680:intron 25.0%
! ACAAATTATGGTAGCAATAA+TGG - chr6_4:77719380-77719399 None:intergenic 25.0%
! CAAAAACATTCGACAAATTA+TGG - chr6_4:77719392-77719411 None:intergenic 25.0%
! CAATAGTACTAATAACTGTT+AGG - chr6_4:77719778-77719797 None:intergenic 25.0%
! TTTCTTGAAATGCTAGAAAT+TGG - chr6_4:77719937-77719956 None:intergenic 25.0%
! GATTTATTATGATCTATGCA+TGG - chr6_4:77720011-77720030 None:intergenic 25.0%
! ATAAGATTCTATGATATTGC+AGG + chr6_4:77720215-77720234 Msa0997680:intron 25.0%
!!! TTTTGGATTTTGAAGATTGA+GGG - chr6_4:77720554-77720573 None:intergenic 25.0%
! AAAACCAAGGAAAAACAAAA+GGG - chr6_4:77720633-77720652 None:intergenic 25.0%
! AAAAACCAAGGAAAAACAAA+AGG - chr6_4:77720634-77720653 None:intergenic 25.0%
!! TCTGTTCATCCATATATTTT+TGG - chr6_4:77720722-77720741 None:intergenic 25.0%
!! ATATTGAACATTTTACTCAC+AGG + chr6_4:77714558-77714577 Msa0997680:intron 25.0%
! TATAATATGCACCTCAAAAA+AGG + chr6_4:77721008-77721027 Msa0997680:intron 25.0%
!!! CCAATTTTAGTAAAATGTGA+AGG - chr6_4:77721046-77721065 None:intergenic 25.0%
!! CCTTCACATTTTACTAAAAT+TGG + chr6_4:77721043-77721062 Msa0997680:intron 25.0%
!! ACATTTTACTAAAATTGGAG+AGG + chr6_4:77721048-77721067 Msa0997680:intron 25.0%
!! CATTTTACTAAAATTGGAGA+GGG + chr6_4:77721049-77721068 Msa0997680:intron 25.0%
! TCTTATAAAGAGTTCAATGT+GGG - chr6_4:77721075-77721094 None:intergenic 25.0%
! TTCTTATAAAGAGTTCAATG+TGG - chr6_4:77721076-77721095 None:intergenic 25.0%
! AAACTTACTTGTGAAACAAT+AGG - chr6_4:77715116-77715135 None:intergenic 25.0%
!!! CCATATATTATTTCTATGGT+AGG - chr6_4:77721539-77721558 None:intergenic 25.0%
! CCTACCATAGAAATAATATA+TGG + chr6_4:77715234-77715253 Msa0997680:intron 25.0%
! CAACTGAAATTCGATATATT+TGG - chr6_4:77721686-77721705 None:intergenic 25.0%
! AAACTACATATATGATCACA+AGG - chr6_4:77722030-77722049 None:intergenic 25.0%
!! AAACAGTTATGTTGACATTT+TGG - chr6_4:77722109-77722128 None:intergenic 25.0%
! TGTATTTATCTAGTAGTCTT+AGG - chr6_4:77722612-77722631 None:intergenic 25.0%
!! ATGATTTGAAATGGATGATT+AGG + chr6_4:77722807-77722826 Msa0997680:intron 25.0%
!! TGATTTGAAATGGATGATTA+GGG + chr6_4:77722808-77722827 Msa0997680:intron 25.0%
! ATATGATTCTATGATATTGC+AGG + chr6_4:77722848-77722867 Msa0997680:intron 25.0%
! ATTATATAGGTTTCTTTGCA+AGG - chr6_4:77723167-77723186 None:intergenic 25.0%
! AAGAAACCTATATAATCAAG+AGG + chr6_4:77723171-77723190 Msa0997680:intron 25.0%
! AGAAACCTATATAATCAAGA+GGG + chr6_4:77723172-77723191 Msa0997680:intron 25.0%
! AGAAACCTATATAAGCTTAT+CGG + chr6_4:77723344-77723363 Msa0997680:intron 25.0%
! TAAACCATTAAGCATATGTT+TGG + chr6_4:77723816-77723835 Msa0997680:intron 25.0%
!! ACACATTTTCTTGCATTATA+TGG + chr6_4:77723841-77723860 Msa0997680:intron 25.0%
! GTATGTCCTATATTTATCTT+AGG + chr6_4:77724088-77724107 Msa0997680:intron 25.0%
! AGAAGAACTTCTAAAAGTGA+AGG + chr6_4:77712983-77713002 Msa0997680:CDS 30.0%
ATTACAAAGGTTTCTTCGAA+AGG - chr6_4:77713061-77713080 None:intergenic 30.0%
!! TAGAAGAACTTCTAAAGTGA+AGG + chr6_4:77713322-77713341 Msa0997680:intron 30.0%
CTTGACTCTCTTGAATATAT+AGG - chr6_4:77713409-77713428 None:intergenic 30.0%
TAACATATAATTGCGGATTC+AGG + chr6_4:77713576-77713595 Msa0997680:intron 30.0%
TGTATCATATATTCCACTAG+TGG + chr6_4:77713687-77713706 Msa0997680:intron 30.0%
CTTTAACTAGGTCAAAATCA+GGG + chr6_4:77713983-77714002 Msa0997680:intron 30.0%
! GTGCAATTTTCAAATTAGAG+GGG + chr6_4:77714049-77714068 Msa0997680:intron 30.0%
!! GCATTTTAACCAAAGATAAC+TGG + chr6_4:77714111-77714130 Msa0997680:intron 30.0%
ACTTTGTAACCAGTTATCTT+TGG - chr6_4:77714123-77714142 None:intergenic 30.0%
AATACCAGTTTATAGGTAAG+TGG + chr6_4:77714214-77714233 Msa0997680:intron 30.0%
AATACGTGGCAATCTATATA+AGG + chr6_4:77714362-77714381 Msa0997680:intron 30.0%
! AGAATAAGTTGGGAAAAGAT+AGG - chr6_4:77714437-77714456 None:intergenic 30.0%
TTCCCAACTTATTCTTACAA+TGG + chr6_4:77714442-77714461 Msa0997680:intron 30.0%
GACCATTGTAAGAATAAGTT+GGG - chr6_4:77714447-77714466 None:intergenic 30.0%
CAACTTATTCTTACAATGGT+CGG + chr6_4:77714446-77714465 Msa0997680:intron 30.0%
!!! TTTTTTTGCGTGTGTTTGAT+TGG + chr6_4:77714480-77714499 Msa0997680:intron 30.0%
GAATCACATTTGAGTGTTAA+TGG - chr6_4:77714658-77714677 None:intergenic 30.0%
ACTCAAATGTGATTCATAGT+CGG + chr6_4:77714663-77714682 Msa0997680:intron 30.0%
!!! CCAACTTTAAACCTTTTTTG+AGG - chr6_4:77714707-77714726 None:intergenic 30.0%
! CCTCAAAAAAGGTTTAAAGT+TGG + chr6_4:77714704-77714723 Msa0997680:intron 30.0%
!!! GGTTTTTTGAAACTATGGTT+GGG - chr6_4:77714807-77714826 None:intergenic 30.0%
!!! AGGTTTTTTGAAACTATGGT+TGG - chr6_4:77714808-77714827 None:intergenic 30.0%
TAATATATGAAACACGACCA+AGG - chr6_4:77714940-77714959 None:intergenic 30.0%
TTGGTCGTGTTTCATATATT+AGG + chr6_4:77714939-77714958 Msa0997680:intron 30.0%
AACTTACTTGTGAAACAATG+GGG - chr6_4:77715115-77715134 None:intergenic 30.0%
AGATTGAAATTCGATATGGT+TGG - chr6_4:77715386-77715405 None:intergenic 30.0%
TTTCATGCTACCAAATAACA+GGG + chr6_4:77715747-77715766 Msa0997680:intron 30.0%
!!! GAGTTTTTTTCCCTGTTATT+TGG - chr6_4:77715760-77715779 None:intergenic 30.0%
AAAGAATCCAAGTATCCAAA+TGG + chr6_4:77716000-77716019 Msa0997680:intron 30.0%
AAGAATCCAAGTATCCAAAT+GGG + chr6_4:77716001-77716020 Msa0997680:intron 30.0%
! AAAACTCATGTTTTCTACAG+AGG + chr6_4:77716123-77716142 Msa0997680:CDS 30.0%
! AAACTCATGTTTTCTACAGA+GGG + chr6_4:77716124-77716143 Msa0997680:CDS 30.0%
TTGCAAATTCAGACAAAGAA+AGG - chr6_4:77716242-77716261 None:intergenic 30.0%
! GGATTTTGCAGAATGAAAAT+TGG + chr6_4:77716300-77716319 Msa0997680:intron 30.0%
GTGGATGTACATACAATAAT+TGG + chr6_4:77716504-77716523 Msa0997680:intron 30.0%
TAGAGAAATACAAAGACTTG+AGG - chr6_4:77716597-77716616 None:intergenic 30.0%
TTCTCTTGTAGTGTACAATT+TGG - chr6_4:77716640-77716659 None:intergenic 30.0%
! AACCGCACATGAATTTATTT+TGG - chr6_4:77717013-77717032 None:intergenic 30.0%
AGCATATATTTGGATCGATT+CGG - chr6_4:77717068-77717087 None:intergenic 30.0%
!!! CGAATATTTTTGGATGTGTT+TGG - chr6_4:77717460-77717479 None:intergenic 30.0%
!!! TGTTTTCGGTTTTTTTGGAT+CGG + chr6_4:77717489-77717508 Msa0997680:intron 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG + chr6_4:77717512-77717531 Msa0997680:intron 30.0%
ATATAGATGAATTCAAGGAC+AGG - chr6_4:77717568-77717587 None:intergenic 30.0%
GAGAGAGGAAAAAAATGAAT+AGG - chr6_4:77717666-77717685 None:intergenic 30.0%
TTTCTATGTTTGTTTGGTCT+AGG - chr6_4:77718053-77718072 None:intergenic 30.0%
!!! TCAACCATTTTGAAGTATCT+GGG + chr6_4:77718476-77718495 Msa0997680:intron 30.0%
GAATGACATTTGAGTGTTAA+TGG - chr6_4:77718593-77718612 None:intergenic 30.0%
ACTCAAATGTCATTCATAGT+CGG + chr6_4:77718598-77718617 Msa0997680:intron 30.0%
!! CCAATTTTAAGCCTTTTTTG+AGG - chr6_4:77718641-77718660 None:intergenic 30.0%
CCTCAAAAAAGGCTTAAAAT+TGG + chr6_4:77718638-77718657 Msa0997680:intron 30.0%
! TCGATAATTTAACTCTAAGG+AGG - chr6_4:77718733-77718752 None:intergenic 30.0%
GACTCGATAATTTAACTCTA+AGG - chr6_4:77718736-77718755 None:intergenic 30.0%
TAATATATGAAGCACGTCAA+AGG - chr6_4:77718838-77718857 None:intergenic 30.0%
TTTGACGTGCTTCATATATT+AGG + chr6_4:77718837-77718856 Msa0997680:intron 30.0%
!!! AATCCATCACTTTTAGGTTT+TGG + chr6_4:77718956-77718975 Msa0997680:intron 30.0%
CATGTTAAAATGATCATGTG+GGG - chr6_4:77715145-77715164 None:intergenic 30.0%
CCATGTTAAAATGATCATGT+GGG - chr6_4:77719042-77719061 None:intergenic 30.0%
!! CCACATGATCATTTTAACAT+GGG + chr6_4:77719040-77719059 Msa0997680:intron 30.0%
! GCTTTGATATCTTTTCCAAA+CGG - chr6_4:77719097-77719116 None:intergenic 30.0%
!!! TACCAAATGATATCGACTTT+TGG + chr6_4:77719231-77719250 Msa0997680:CDS 30.0%
TATTGCATCATCACTACAAA+TGG - chr6_4:77719505-77719524 None:intergenic 30.0%
! TTTGTAGTGATGATGCAATA+AGG + chr6_4:77719505-77719524 Msa0997680:intron 30.0%
! TTGTAGTGATGATGCAATAA+GGG + chr6_4:77719506-77719525 Msa0997680:intron 30.0%
TACCTTGTGATTATAATGTC+AGG + chr6_4:77719575-77719594 Msa0997680:intron 30.0%
ACCTTGTGATTATAATGTCA+GGG + chr6_4:77719576-77719595 Msa0997680:intron 30.0%
AGTACTAATAACTGTTAGGT+GGG - chr6_4:77719774-77719793 None:intergenic 30.0%
TAGTACTAATAACTGTTAGG+TGG - chr6_4:77719775-77719794 None:intergenic 30.0%
! AACATTTTCACAAAGTAAGC+AGG + chr6_4:77720096-77720115 Msa0997680:intron 30.0%
ACAGTAAAAGACTGAACAAT+AGG - chr6_4:77720154-77720173 None:intergenic 30.0%
! ATGATTTGAAATGGATGACT+AGG + chr6_4:77720174-77720193 Msa0997680:intron 30.0%
! TGATTTGAAATGGATGACTA+GGG + chr6_4:77720175-77720194 Msa0997680:intron 30.0%
!! ATGATATTGCAGGTATTGAT+CGG + chr6_4:77720225-77720244 Msa0997680:intron 30.0%
ATTCACCTACTTTGCTAAAA+AGG - chr6_4:77720319-77720338 None:intergenic 30.0%
GGTGAATTATCAATTCTTTG+CGG + chr6_4:77720332-77720351 Msa0997680:intron 30.0%
!! CAACTACCATTTTGGAAAAA+GGG - chr6_4:77720389-77720408 None:intergenic 30.0%
!! ACAACTACCATTTTGGAAAA+AGG - chr6_4:77720390-77720409 None:intergenic 30.0%
TGGATTACAGTAATCATAGA+TGG - chr6_4:77720469-77720488 None:intergenic 30.0%
TATGATTACTGTAATCCACT+TGG + chr6_4:77720471-77720490 Msa0997680:intron 30.0%
!! GTTTTGGATTTTGAAGATTG+AGG - chr6_4:77720555-77720574 None:intergenic 30.0%
!!! GATTGATGATTTTGCTGTTT+TGG - chr6_4:77720571-77720590 None:intergenic 30.0%
!!! TTTTTTGGGATTGATTATCC+AGG - chr6_4:77720593-77720612 None:intergenic 30.0%
ACGCAAACACCAAAAATATA+TGG + chr6_4:77720710-77720729 Msa0997680:intron 30.0%
GAATCACATTTGAGTGTTAA+TGG - chr6_4:77714658-77714677 None:intergenic 30.0%
ACTCAAATGTGATTCATAGT+CGG + chr6_4:77714663-77714682 Msa0997680:intron 30.0%
!!! CCAACTTTAAACCTTTTTTG+AGG - chr6_4:77714707-77714726 None:intergenic 30.0%
! CCTCAAAAAAGGTTTAAAGT+TGG + chr6_4:77714704-77714723 Msa0997680:intron 30.0%
!!! GTTTTTTGAAACTATGGTTG+GGG - chr6_4:77714806-77714825 None:intergenic 30.0%
!!! GGTTTTTTGAAACTATGGTT+GGG - chr6_4:77714807-77714826 None:intergenic 30.0%
!!! AGGTTTTTTGAAACTATGGT+TGG - chr6_4:77714808-77714827 None:intergenic 30.0%
!!! AACGAGGTTTTTTGAAACTA+TGG - chr6_4:77721127-77721146 None:intergenic 30.0%
TCAATGATTTAACTCTAACG+AGG - chr6_4:77721143-77721162 None:intergenic 30.0%
GAGTTAAATCATTGAGTCAT+CGG + chr6_4:77721148-77721167 Msa0997680:intron 30.0%
TTTGAAGGACGTTATTCTAA+AGG - chr6_4:77721178-77721197 None:intergenic 30.0%
TGATCTTCAAAACCTAAAAG+TGG - chr6_4:77721336-77721355 None:intergenic 30.0%
!!! ATCAGTTTTAAAACGCTTCT+TGG + chr6_4:77721352-77721371 Msa0997680:intron 30.0%
ACTTGTGAAACAATAGGATT+TGG - chr6_4:77721412-77721431 None:intergenic 30.0%
! CAGTTTCATTTCTCTAAAGA+CGG - chr6_4:77721916-77721935 None:intergenic 30.0%
AGAAATGAAACTGCATGAAA+AGG + chr6_4:77721923-77721942 Msa0997680:intron 30.0%
! AACATTTTCACAAAGTAAGC+AGG + chr6_4:77720096-77720115 Msa0997680:intron 30.0%
GCAACACAAATTTAGCTATA+TGG - chr6_4:77722315-77722334 None:intergenic 30.0%
! TACATTGATCTAAAGCAAAC+TGG + chr6_4:77722511-77722530 Msa0997680:intron 30.0%
AGACTCAAAATTTCATCATC+CGG + chr6_4:77722635-77722654 Msa0997680:intron 30.0%
!!! TGCTTATTTTGATCTATGCA+AGG - chr6_4:77722732-77722751 None:intergenic 30.0%
TTGCATAGATCAAAATAAGC+AGG + chr6_4:77722731-77722750 Msa0997680:intron 30.0%
ATGATATTGCAGGAATTGAT+CGG + chr6_4:77722858-77722877 Msa0997680:intron 30.0%
ATACAAATTGTCCTTCATGA+AGG - chr6_4:77722960-77722979 None:intergenic 30.0%
AAGGACAATTTGTATCATCA+AGG + chr6_4:77722965-77722984 Msa0997680:CDS 30.0%
!! TTGATGCTTTGATTTTGAGA+AGG - chr6_4:77723003-77723022 None:intergenic 30.0%
CTTATATAGGTTTCTTTGCA+AGG - chr6_4:77723339-77723358 None:intergenic 30.0%
!!! TAGAGGAACTTTTAAAGTGA+AGG + chr6_4:77723440-77723459 Msa0997680:intron 30.0%
AGAAATATCACTACTAGTCA+TGG - chr6_4:77723761-77723780 None:intergenic 30.0%
GTATCCAAACATATGCTTAA+TGG - chr6_4:77723823-77723842 None:intergenic 30.0%
TAGGGATATTGCATTCTATA+TGG - chr6_4:77723912-77723931 None:intergenic 30.0%
AATGAAACTTAGGACTAATC+AGG + chr6_4:77724013-77724032 Msa0997680:intron 30.0%
! TTAGGACTAATCAGGTATTT+TGG + chr6_4:77724021-77724040 Msa0997680:intron 30.0%
TAGGACATACATAGATCAAT+AGG - chr6_4:77724078-77724097 None:intergenic 30.0%
TTCTAAATCAAGATCAGCAG+GGG - chr6_4:77712967-77712986 None:intergenic 35.0%
CTTCTAAATCAAGATCAGCA+GGG - chr6_4:77712968-77712987 None:intergenic 35.0%
TCTTCTAAATCAAGATCAGC+AGG - chr6_4:77712969-77712988 None:intergenic 35.0%
CTTGACTCTCTTGATTACAA+AGG - chr6_4:77713074-77713093 None:intergenic 35.0%
GCATGAGAAAAATACACGTT+TGG + chr6_4:77713134-77713153 Msa0997680:intron 35.0%
AGAGCTAGACGATAATATTG+AGG + chr6_4:77713351-77713370 Msa0997680:intron 35.0%
TTGTAGCATATAAGCCTCAT+TGG + chr6_4:77713433-77713452 Msa0997680:intron 35.0%
! TTTTACAATCCGAACCAATG+AGG - chr6_4:77713450-77713469 None:intergenic 35.0%
ACCGTTAGATCAATGTTCTA+CGG + chr6_4:77713750-77713769 Msa0997680:intron 35.0%
ACCGTAGAACATTGATCTAA+CGG - chr6_4:77713754-77713773 None:intergenic 35.0%
TGACCTAGTTAAAGCTGATT+TGG - chr6_4:77713977-77713996 None:intergenic 35.0%
GCTTTAACTAGGTCAAAATC+AGG + chr6_4:77713982-77714001 Msa0997680:intron 35.0%
TTGCAAATAGGTGAAACATG+AGG + chr6_4:77714018-77714037 Msa0997680:intron 35.0%
TGCAAATAGGTGAAACATGA+GGG + chr6_4:77714019-77714038 Msa0997680:intron 35.0%
TGTACCACTTACCTATAAAC+TGG - chr6_4:77714221-77714240 None:intergenic 35.0%
AGGTAAGTGGTACAAAAACA+AGG + chr6_4:77714227-77714246 Msa0997680:intron 35.0%
GGTACAAAAACAAGGATTAC+AGG + chr6_4:77714235-77714254 Msa0997680:intron 35.0%
!! AACATATAGTACCGGTTTCA+AGG + chr6_4:77714319-77714338 Msa0997680:intron 35.0%
TTAACCACTTACCTTGAAAC+CGG - chr6_4:77714333-77714352 None:intergenic 35.0%
CGACCATTGTAAGAATAAGT+TGG - chr6_4:77714448-77714467 None:intergenic 35.0%
ATTTGAGTGTTAATGGTCTG+CGG - chr6_4:77714651-77714670 None:intergenic 35.0%
!!! GACGAGGTTTTTTGAAACTA+TGG - chr6_4:77714812-77714831 None:intergenic 35.0%
TCAATGATTTAACTCTGACG+AGG - chr6_4:77714828-77714847 None:intergenic 35.0%
GAGTTAAATCATTGAGCCAT+CGG + chr6_4:77714833-77714852 Msa0997680:intron 35.0%
TTGAACTAGATCTGGATATG+AGG - chr6_4:77714886-77714905 None:intergenic 35.0%
AACGACAATTGAACTAGATC+TGG - chr6_4:77714894-77714913 None:intergenic 35.0%
TGATCTTCAAAACCTAAGAG+TGG - chr6_4:77715029-77715048 None:intergenic 35.0%
TTATAACCAACGAGTGATGA+TGG + chr6_4:77715299-77715318 Msa0997680:intron 35.0%
!! TGGTACTTCGTTGATTTGAT+TGG - chr6_4:77715366-77715385 None:intergenic 35.0%
TATTGCATCATCACTACGAA+TGG - chr6_4:77715655-77715674 None:intergenic 35.0%
! TTCGTAGTGATGATGCAATA+CGG + chr6_4:77715655-77715674 Msa0997680:intron 35.0%
GTTTCATGCTACCAAATAAC+AGG + chr6_4:77715746-77715765 Msa0997680:intron 35.0%
! ATCTACAGATGACGCATTTT+CGG - chr6_4:77715851-77715870 None:intergenic 35.0%
! AAGAAGAAGAGAGACTTTTG+AGG - chr6_4:77715907-77715926 None:intergenic 35.0%
! TGAGTGTGTGTTGTTCTATT+AGG + chr6_4:77715957-77715976 Msa0997680:intron 35.0%
! AGTTTGTAGCTCTGTTAGAT+CGG - chr6_4:77716029-77716048 None:intergenic 35.0%
AAGAAAGAAAGACTGACCAA+GGG - chr6_4:77716219-77716238 None:intergenic 35.0%
TGCAGAATGAAAATTGGGTT+CGG + chr6_4:77716306-77716325 Msa0997680:intron 35.0%
! GGGTCATACTATTAGCTTAT+TGG + chr6_4:77716533-77716552 Msa0997680:intron 35.0%
AAAGTAGAGAGAAGTAGAGA+AGG - chr6_4:77716694-77716713 None:intergenic 35.0%
!! ATATTTGGATCGATTCGGAT+CGG - chr6_4:77717063-77717082 None:intergenic 35.0%
!!! GTTTGGTTCGGTTTTGAAAA+AGG + chr6_4:77717388-77717407 Msa0997680:intron 35.0%
AAAAACCGCTATGATCGAAT+CGG - chr6_4:77717425-77717444 None:intergenic 35.0%
!! GATGTGTTTGGATGTTGTTT+TGG - chr6_4:77717448-77717467 None:intergenic 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG + chr6_4:77717507-77717526 Msa0997680:intron 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG + chr6_4:77717517-77717536 Msa0997680:intron 35.0%
TCTCCAACTTAACGTTACAA+TGG + chr6_4:77717713-77717732 Msa0997680:intron 35.0%
CAACTTAACGTTACAATGGT+CGG + chr6_4:77717717-77717736 Msa0997680:intron 35.0%
AACTTAACGTTACAATGGTC+GGG + chr6_4:77717718-77717737 Msa0997680:intron 35.0%
TGAAGTCGAGATACATGATA+CGG + chr6_4:77717866-77717885 Msa0997680:intron 35.0%
TGGTGAAAAACCAATATGTG+CGG - chr6_4:77718312-77718331 None:intergenic 35.0%
GATACTCTCATGATACGTAT+CGG + chr6_4:77718405-77718424 Msa0997680:intron 35.0%
ATACTCTCATGATACGTATC+GGG + chr6_4:77718406-77718425 Msa0997680:intron 35.0%
!!! GTCAACCATTTTGAAGTATC+TGG + chr6_4:77718475-77718494 Msa0997680:intron 35.0%
TAAGCCCAGATACTTCAAAA+TGG - chr6_4:77718483-77718502 None:intergenic 35.0%
ATCATTGATAAGTGGCGTTA+AGG - chr6_4:77718890-77718909 None:intergenic 35.0%
AATGAAGATCCATCACACTT+AGG + chr6_4:77718913-77718932 Msa0997680:intron 35.0%
!! CCCACATGATCATTTTAACA+TGG + chr6_4:77719039-77719058 Msa0997680:intron 35.0%
CCCATGTTAAAATGATCATG+TGG - chr6_4:77719043-77719062 None:intergenic 35.0%
CCAAACGGAGAGAATAATTA+TGG - chr6_4:77719082-77719101 None:intergenic 35.0%
CCATAATTATTCTCTCCGTT+TGG + chr6_4:77719079-77719098 Msa0997680:intron 35.0%
!! TAATAACCAACGAGTGTTGA+TGG + chr6_4:77719149-77719168 Msa0997680:intron 35.0%
CACCAAAAGTCGATATCATT+TGG - chr6_4:77719236-77719255 None:intergenic 35.0%
GAAATTGAATATCCTGTCCT+TGG + chr6_4:77719255-77719274 Msa0997680:CDS 35.0%
ACAGATAAAATCACCTTCTG+CGG - chr6_4:77715500-77715519 None:intergenic 35.0%
AGAGATGAAACTGCATGAAA+AGG + chr6_4:77715623-77715642 Msa0997680:intron 35.0%
ACCCTGACATTATAATCACA+AGG - chr6_4:77719580-77719599 None:intergenic 35.0%
TCGGATCTGTAAATGAAAAG+AGG + chr6_4:77719621-77719640 Msa0997680:intron 35.0%
!! AACAAGGTGTCGTATATATG+CGG + chr6_4:77719683-77719702 Msa0997680:intron 35.0%
! CGGTAATGATTTTCACCTTT+GGG - chr6_4:77719713-77719732 None:intergenic 35.0%
! ACGGTAATGATTTTCACCTT+TGG - chr6_4:77719714-77719733 None:intergenic 35.0%
! TTTGAGGTTTCTCGTGTATA+CGG - chr6_4:77719733-77719752 None:intergenic 35.0%
GCAAGAAACTACCTATATCA+GGG - chr6_4:77719879-77719898 None:intergenic 35.0%
AGCAAGAAACTACCTATATC+AGG - chr6_4:77719880-77719899 None:intergenic 35.0%
TTGGAAAAAGGGTGAAACAT+GGG - chr6_4:77720378-77720397 None:intergenic 35.0%
TTTGGAAAAAGGGTGAAACA+TGG - chr6_4:77720379-77720398 None:intergenic 35.0%
! GTTTCACCCTTTTTCCAAAA+TGG + chr6_4:77720380-77720399 Msa0997680:intron 35.0%
! ATCAAGGACAACTACCATTT+TGG - chr6_4:77720397-77720416 None:intergenic 35.0%
CTTTGACTAGGTCAAAATCA+AGG - chr6_4:77720413-77720432 None:intergenic 35.0%
AACAGCAAAATCATCAATCC+TGG + chr6_4:77720572-77720591 Msa0997680:intron 35.0%
ATGGATGAACAGAGTAAGAA+AGG + chr6_4:77720729-77720748 Msa0997680:intron 35.0%
TGGATGAACAGAGTAAGAAA+GGG + chr6_4:77720730-77720749 Msa0997680:intron 35.0%
!! AGTTAAGATCCACCACTTTT+AGG + chr6_4:77721321-77721340 Msa0997680:intron 35.0%
TCTTCAAAACCTAAAAGTGG+TGG - chr6_4:77721333-77721352 None:intergenic 35.0%
TTATAACCAACGAGTGATGA+TGG + chr6_4:77715299-77715318 Msa0997680:intron 35.0%
!! TGGTACTTCGTTGATTTGAT+TGG - chr6_4:77715366-77715385 None:intergenic 35.0%
!! TATAAGGAGGTTGATTTGGA+TGG - chr6_4:77721775-77721794 None:intergenic 35.0%
! AGCATATAAGGAGGTTGATT+TGG - chr6_4:77721779-77721798 None:intergenic 35.0%
!!! GTTGACATTTTGGTTGTTTC+TGG - chr6_4:77722099-77722118 None:intergenic 35.0%
GATTTATTGTGATCGATGCA+TGG - chr6_4:77722173-77722192 None:intergenic 35.0%
AGCTAAATTTGTGTTGCACT+AGG + chr6_4:77722318-77722337 Msa0997680:intron 35.0%
GCTAAATTTGTGTTGCACTA+GGG + chr6_4:77722319-77722338 Msa0997680:intron 35.0%
AAGCATCAACATACTCAAGA+AGG + chr6_4:77723014-77723033 Msa0997680:CDS 35.0%
CTCTAAATCAAGATCAGCAA+GGG - chr6_4:77723073-77723092 None:intergenic 35.0%
! AGAGGAACTTCTAAAAGTGA+AGG + chr6_4:77723089-77723108 Msa0997680:CDS 35.0%
CTTGACCCTCTTGATTATAT+AGG - chr6_4:77723180-77723199 None:intergenic 35.0%
TTGCAGCATATAAACCTCAT+TGG + chr6_4:77723204-77723223 Msa0997680:intron 35.0%
! GCATATAAACCTCATTGGTT+CGG + chr6_4:77723209-77723228 Msa0997680:intron 35.0%
ACTTCATTGAAAGAGTTCCA+TGG + chr6_4:77723283-77723302 Msa0997680:intron 35.0%
TCACACCGATAAGCTTATAT+AGG - chr6_4:77723352-77723371 None:intergenic 35.0%
ATATAAGCTTATCGGTGTGA+CGG + chr6_4:77723352-77723371 Msa0997680:intron 35.0%
GCTTCATTGAAAGAACTAGA+TGG + chr6_4:77723462-77723481 Msa0997680:intron 35.0%
ATCTACTTGGTTTCTTTGCA+AGG - chr6_4:77723518-77723537 None:intergenic 35.0%
CTTATATGCTGCAATCTACT+TGG - chr6_4:77723531-77723550 None:intergenic 35.0%
! TGAGATTAACTCAGTTGGTA+GGG - chr6_4:77723930-77723949 None:intergenic 35.0%
TACCAACTGAGTTAATCTCA+CGG + chr6_4:77723930-77723949 Msa0997680:intron 35.0%
TTGCAGCATACAAGTCTAGT+TGG + chr6_4:77713098-77713117 Msa0997680:intron 40.0%
GCATACAAGTCTAGTTGGTT+CGG + chr6_4:77713103-77713122 Msa0997680:intron 40.0%
ACTTCATTGAAAGAGCTCCA+TGG + chr6_4:77713164-77713183 Msa0997680:intron 40.0%
TGTGACCGAATAACTGAAGA+AGG + chr6_4:77713248-77713267 Msa0997680:intron 40.0%
CTCCACCTTCTTCAGTTATT+CGG - chr6_4:77713256-77713275 None:intergenic 40.0%
GAATAACTGAAGAAGGTGGA+GGG + chr6_4:77713255-77713274 Msa0997680:intron 40.0%
TTCTAAATCAAGATCGGCAG+GGG - chr6_4:77713307-77713326 None:intergenic 40.0%
CTTCTAAATCAAGATCGGCA+GGG - chr6_4:77713308-77713327 None:intergenic 40.0%
TCTTCTAAATCAAGATCGGC+AGG - chr6_4:77713309-77713328 None:intergenic 40.0%
! GCATATAAGCCTCATTGGTT+CGG + chr6_4:77713438-77713457 Msa0997680:intron 40.0%
! ACGCCAAATCAGCTTTAACT+AGG + chr6_4:77713971-77713990 Msa0997680:intron 40.0%
AACTAGGTCAAAATCAGGGA+AGG + chr6_4:77713987-77714006 Msa0997680:intron 40.0%
!! AAGGTCGTCGTTTTGCAAAT+AGG + chr6_4:77714006-77714025 Msa0997680:intron 40.0%
GCAAATAGGTGAAACATGAG+GGG + chr6_4:77714020-77714039 Msa0997680:intron 40.0%
GGCAATCTATATAAGGCAAG+TGG + chr6_4:77714369-77714388 Msa0997680:intron 40.0%
CAAATGTGATTCATAGTCGG+TGG + chr6_4:77714666-77714685 Msa0997680:intron 40.0%
! TTATTCTAAAGGAGCTCCGA+TGG - chr6_4:77714852-77714871 None:intergenic 40.0%
GTTGTTCGAGATCAAAACCT+TGG + chr6_4:77714920-77714939 Msa0997680:intron 40.0%
AGTTAAGATCCACCACTCTT+AGG + chr6_4:77715014-77715033 Msa0997680:intron 40.0%
TCTTCAAAACCTAAGAGTGG+TGG - chr6_4:77715026-77715045 None:intergenic 40.0%
CATGACAATCAAGCAAATCC+CGG - chr6_4:77715430-77715449 None:intergenic 40.0%
ACTTCCTTATATGCTGCAGA+AGG + chr6_4:77715484-77715503 Msa0997680:CDS 40.0%
ATCACCTTCTGCAGCATATA+AGG - chr6_4:77715491-77715510 None:intergenic 40.0%
TCTAACAGAGCTACAAACTC+TGG + chr6_4:77716030-77716049 Msa0997680:intron 40.0%
TACAAACTCTGGTTACTGGA+AGG + chr6_4:77716041-77716060 Msa0997680:intron 40.0%
TCAAAGACTCGTGAAGTTCT+TGG + chr6_4:77716093-77716112 Msa0997680:CDS 40.0%
CAATCAGTTCTTGAACCATG+AGG - chr6_4:77716156-77716175 None:intergenic 40.0%
CTCATGGTTCAAGAACTGAT+TGG + chr6_4:77716154-77716173 Msa0997680:CDS 40.0%
AGAAAGAAAGACTGACCAAG+GGG - chr6_4:77716218-77716237 None:intergenic 40.0%
GAAGAAAGAAAGACTGACCA+AGG - chr6_4:77716220-77716239 None:intergenic 40.0%
! ATATTTCTGAAGAGGAGAGG+TGG + chr6_4:77716335-77716354 Msa0997680:CDS 40.0%
AATGGAGAAGAGACAGTGAA+AGG + chr6_4:77716365-77716384 Msa0997680:CDS 40.0%
GTGTAATCAAGCAGTTCTGT+CGG - chr6_4:77716855-77716874 None:intergenic 40.0%
GTCTCAAAATCGATCCAAAC+CGG - chr6_4:77716975-77716994 None:intergenic 40.0%
AATTCATGTGCGGTTCAGTT+TGG + chr6_4:77717018-77717037 Msa0997680:intron 40.0%
!!! TTTACTTTTGCGGTTCGGTT+TGG + chr6_4:77717371-77717390 Msa0997680:intron 40.0%
GCTATGATCGAATCGGATTT+CGG - chr6_4:77717418-77717437 None:intergenic 40.0%
! GAAATCCGATTCGATCATAG+CGG + chr6_4:77717417-77717436 Msa0997680:intron 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG + chr6_4:77717496-77717515 Msa0997680:intron 40.0%
AGATGAATTCAAGGACAGGT+TGG - chr6_4:77717564-77717583 None:intergenic 40.0%
CGACCATTGTAACGTTAAGT+TGG - chr6_4:77717719-77717738 None:intergenic 40.0%
!!! ATTTTCCGGTATCGACGTAT+CGG - chr6_4:77717910-77717929 None:intergenic 40.0%
GGTGAAAAACCAATATGTGC+GGG - chr6_4:77718311-77718330 None:intergenic 40.0%
! TGATACGTATCGGGAAGTAT+CGG + chr6_4:77718415-77718434 Msa0997680:intron 40.0%
CAAATGTCATTCATAGTCGG+TGG + chr6_4:77718601-77718620 Msa0997680:intron 40.0%
TTGATAAGTGGCGTTAAGGA+TGG - chr6_4:77718886-77718905 None:intergenic 40.0%
! GATCCATCACACTTAGGTTT+TGG + chr6_4:77718919-77718938 Msa0997680:intron 40.0%
TCTCCAAAACCTAAGTGTGA+TGG - chr6_4:77718925-77718944 None:intergenic 40.0%
CCTCCAAAACCTAAAAGTGA+TGG - chr6_4:77718962-77718981 None:intergenic 40.0%
!!! CCATCACTTTTAGGTTTTGG+AGG + chr6_4:77718959-77718978 Msa0997680:intron 40.0%
TTGAATATCCTGTCCTTGGA+CGG + chr6_4:77719259-77719278 Msa0997680:CDS 40.0%
CATAAGGAGGTTGAATTCGA+TGG - chr6_4:77719326-77719345 None:intergenic 40.0%
TATATATGCGGTACACCCAA+AGG + chr6_4:77719695-77719714 Msa0997680:intron 40.0%
!!! CTGTTAGGTGGGTGTTTTTT+GGG - chr6_4:77719763-77719782 None:intergenic 40.0%
!!! ACTGTTAGGTGGGTGTTTTT+TGG - chr6_4:77719764-77719783 None:intergenic 40.0%
AATTCTTAGGCCCATACCTT+CGG + chr6_4:77719810-77719829 Msa0997680:intron 40.0%
!! ATATTGCAGGTATTGATCGG+AGG + chr6_4:77720228-77720247 Msa0997680:intron 40.0%
AAACTTATCGCCCTTAGCAT+TGG - chr6_4:77720262-77720281 None:intergenic 40.0%
!! CTGTGCCTTTTTAGCAAAGT+AGG + chr6_4:77720311-77720330 Msa0997680:intron 40.0%
TGGAAAAAGGGTGAAACATG+GGG - chr6_4:77720377-77720396 None:intergenic 40.0%
!! GTTTTTCCTTGGTTTTTCCC+TGG + chr6_4:77720637-77720656 Msa0997680:intron 40.0%
ATGAACAGAGTAAGAAAGGG+AGG + chr6_4:77720733-77720752 Msa0997680:intron 40.0%
CAAATGTGATTCATAGTCGG+TGG + chr6_4:77714666-77714685 Msa0997680:intron 40.0%
GTGAGTAATCACGACTATGA+GGG - chr6_4:77721099-77721118 None:intergenic 40.0%
TGTTGTTCGAGATCAAAACC+TGG + chr6_4:77714919-77714938 Msa0997680:intron 40.0%
GTTGTTCGAGATCAAAACCT+GGG + chr6_4:77714920-77714939 Msa0997680:intron 40.0%
TAATATATGAAGCACGACCC+AGG - chr6_4:77721247-77721266 None:intergenic 40.0%
TGGGTCGTGCTTCATATATT+AGG + chr6_4:77721246-77721265 Msa0997680:intron 40.0%
TTGAATCACATGTCCTTGAC+CGG + chr6_4:77721708-77721727 Msa0997680:intron 40.0%
CATGACAATCAAGCAAATCC+CGG - chr6_4:77715430-77715449 None:intergenic 40.0%
ATCAACCTCCTTATATGCTG+CGG + chr6_4:77721780-77721799 Msa0997680:intron 40.0%
ATCACATTCCGCAGCATATA+AGG - chr6_4:77721791-77721810 None:intergenic 40.0%
TATTGCATCATCACTGCGAA+TGG - chr6_4:77721955-77721974 None:intergenic 40.0%
!! AGGAGGCACCAAAATATTGT+GGG + chr6_4:77722350-77722369 Msa0997680:intron 40.0%
! TGTCCATGTTCAACTCGTTT+TGG - chr6_4:77722388-77722407 None:intergenic 40.0%
! ATCCATGTAACTAAGAGCAC+CGG - chr6_4:77722657-77722676 None:intergenic 40.0%
!! ACTGAAGAGTACCTTCATGA+AGG + chr6_4:77722946-77722965 Msa0997680:CDS 40.0%
CATCAACATACTCAAGAAGG+TGG + chr6_4:77723017-77723036 Msa0997680:CDS 40.0%
CCTCTAAATCAAGATCAGCA+AGG - chr6_4:77723074-77723093 None:intergenic 40.0%
CCTTGCTGATCTTGATTTAG+AGG + chr6_4:77723071-77723090 Msa0997680:CDS 40.0%
CTTTACAATCCGAACCAATG+AGG - chr6_4:77723221-77723240 None:intergenic 40.0%
! TGTGACGGAATAACTGAAGA+AGG + chr6_4:77723367-77723386 Msa0997680:intron 40.0%
AAGGTCGAGGAAATTGACAA+AGG + chr6_4:77723386-77723405 Msa0997680:intron 40.0%
CCTCTAAATCAAGATCAGCA+GGG - chr6_4:77723074-77723093 None:intergenic 40.0%
TCCTCTAAATCAAGATCAGC+AGG - chr6_4:77723075-77723094 None:intergenic 40.0%
AGAACTAGATGGTGACATTG+AGG + chr6_4:77723473-77723492 Msa0997680:intron 40.0%
TTGCAGCATATAAGCCTCAT+TGG + chr6_4:77723537-77723556 Msa0997680:intron 40.0%
! GCATATAAGCCTCATTGGTT+TGG + chr6_4:77713438-77713457 Msa0997680:intron 40.0%
!! TAAGCCTCATTGGTTTGGTT+CGG + chr6_4:77723547-77723566 Msa0997680:intron 40.0%
!! CAGAGCACTGTACAAGTTAA+GGG + chr6_4:77723710-77723729 Msa0997680:intron 40.0%
! TGTGATTTTCCACAGCAGTT+CGG + chr6_4:77723877-77723896 Msa0997680:intron 40.0%
GTGAGATTAACTCAGTTGGT+AGG - chr6_4:77723931-77723950 None:intergenic 40.0%
ACCAACTGAGTTAATCTCAC+GGG + chr6_4:77723931-77723950 Msa0997680:intron 40.0%
TCAACTTCCTCCACCTTCTT+CGG - chr6_4:77712924-77712943 None:intergenic 45.0%
AAGGTGGAGGAAGTTGACAA+AGG + chr6_4:77712927-77712946 Msa0997680:CDS 45.0%
CAAGATCAGCAGGGGATATA+GGG - chr6_4:77712959-77712978 None:intergenic 45.0%
TCAAGATCAGCAGGGGATAT+AGG - chr6_4:77712960-77712979 None:intergenic 45.0%
GCTTCATTGAAAGAGCTCCA+TGG + chr6_4:77713005-77713024 Msa0997680:CDS 45.0%
TCATTGAAAGAGCTCCATGG+TGG + chr6_4:77713008-77713027 Msa0997680:CDS 45.0%
GACCGAATAACTGAAGAAGG+TGG + chr6_4:77713251-77713270 Msa0997680:intron 45.0%
CGAATAACTGAAGAAGGTGG+AGG + chr6_4:77713254-77713273 Msa0997680:intron 45.0%
AAGGTGGAGGGAATTGACAA+AGG + chr6_4:77713267-77713286 Msa0997680:intron 45.0%
AGTTTGATCTCAGCCACTAG+TGG - chr6_4:77713703-77713722 None:intergenic 45.0%
AGCGTGAAGCAGTTATTGCA+GGG + chr6_4:77713787-77713806 Msa0997680:intron 45.0%
AAACCACGACCCCTAAACTT+CGG - chr6_4:77713822-77713841 None:intergenic 45.0%
GATTACAGGCTTCCTATACG+AGG + chr6_4:77714249-77714268 Msa0997680:intron 45.0%
!! AGTACCGGTTTCAAGGTAAG+TGG + chr6_4:77714326-77714345 Msa0997680:intron 45.0%
GTGAGCAATCACGACTATGA+GGG - chr6_4:77714785-77714804 None:intergenic 45.0%
ACTTGTGAAACAATGGGGTC+TGG - chr6_4:77715110-77715129 None:intergenic 45.0%
TGGTATCCATCATCACTCGT+TGG - chr6_4:77715308-77715327 None:intergenic 45.0%
TTGAATCGCATGTCCTTGAC+CGG + chr6_4:77715408-77715427 Msa0997680:CDS 45.0%
AATCAAGCAAATCCCGGTCA+AGG - chr6_4:77715424-77715443 None:intergenic 45.0%
! CGGGATTTGCTTGATTGTCA+TGG + chr6_4:77715428-77715447 Msa0997680:CDS 45.0%
ATTTCGACCTCCAGATGTAG+GGG - chr6_4:77715462-77715481 None:intergenic 45.0%
GATTTCGACCTCCAGATGTA+GGG - chr6_4:77715463-77715482 None:intergenic 45.0%
TGATTTCGACCTCCAGATGT+AGG - chr6_4:77715464-77715483 None:intergenic 45.0%
TCGGTTCCCATTTGGATACT+TGG - chr6_4:77716010-77716029 None:intergenic 45.0%
! CTGTTAGATCGGTTCCCATT+TGG - chr6_4:77716018-77716037 None:intergenic 45.0%
GAGCTACAAACTCTGGTTAC+TGG + chr6_4:77716037-77716056 Msa0997680:intron 45.0%
TTACTGGAAGGCAACTGGTT+TGG + chr6_4:77716053-77716072 Msa0997680:intron 45.0%
TCAGTTCTTGAACCATGAGG+TGG - chr6_4:77716153-77716172 None:intergenic 45.0%
! GGTGTCGCATATTTCTGAAG+AGG + chr6_4:77716327-77716346 Msa0997680:CDS 45.0%
! CGCATATTTCTGAAGAGGAG+AGG + chr6_4:77716332-77716351 Msa0997680:CDS 45.0%
! AGGAGAGGTGGTGCTAAAAA+TGG + chr6_4:77716347-77716366 Msa0997680:CDS 45.0%
AAAGGAGTGAAGCCAAGCAA+TGG + chr6_4:77716383-77716402 Msa0997680:CDS 45.0%
CTCAGCTTCAAGTGCAAAAG+TGG + chr6_4:77716436-77716455 Msa0997680:intron 45.0%
CTTGGAGAGCAAGCACAATA+TGG - chr6_4:77716559-77716578 None:intergenic 45.0%
AGGAACAAGCACCAATGACT+TGG - chr6_4:77716577-77716596 None:intergenic 45.0%
CTTGATTACACCCTCGATCA+TGG + chr6_4:77716864-77716883 Msa0997680:intron 45.0%
AACGAGACAACCATGATCGA+GGG - chr6_4:77716877-77716896 None:intergenic 45.0%
AAACGAGACAACCATGATCG+AGG - chr6_4:77716878-77716897 None:intergenic 45.0%
!!! TTTTGCGGTTCGGTTTGGTT+CGG + chr6_4:77717376-77717395 Msa0997680:intron 45.0%
!! ATTCAAGGACAGGTTGGTGA+GGG - chr6_4:77717558-77717577 None:intergenic 45.0%
!! AATTCAAGGACAGGTTGGTG+AGG - chr6_4:77717559-77717578 None:intergenic 45.0%
CTTGAGAGATGAGAGAGAGA+GGG - chr6_4:77717640-77717659 None:intergenic 45.0%
ACTTGAGAGATGAGAGAGAG+AGG - chr6_4:77717641-77717660 None:intergenic 45.0%
!! GATACGTATCGGGAAGTATC+GGG + chr6_4:77718416-77718435 Msa0997680:intron 45.0%
ATATCGGTGCAGGATACGTA+GGG + chr6_4:77718442-77718461 Msa0997680:intron 45.0%
TCTCATCGTCGTTATCTCTG+TGG + chr6_4:77718799-77718818 Msa0997680:intron 45.0%
AGGTATCCATCAACACTCGT+TGG - chr6_4:77719158-77719177 None:intergenic 45.0%
TGAATATCCTGTCCTTGGAC+GGG + chr6_4:77719260-77719279 Msa0997680:CDS 45.0%
TTCCTACGAATCTGGAGGTT+CGG + chr6_4:77719602-77719621 Msa0997680:intron 45.0%
!!! TTTTTTGGGAGGGTGGTTTG+AGG - chr6_4:77719749-77719768 None:intergenic 45.0%
!!! TAGGTGGGTGTTTTTTGGGA+GGG - chr6_4:77719759-77719778 None:intergenic 45.0%
!!! TTAGGTGGGTGTTTTTTGGG+AGG - chr6_4:77719760-77719779 None:intergenic 45.0%
ATTCTTAGGCCCATACCTTC+GGG + chr6_4:77719811-77719830 Msa0997680:intron 45.0%
GAAACTACCTATATCAGGGC+CGG - chr6_4:77719875-77719894 None:intergenic 45.0%
AGGAGGCAATTCCAATGCTA+AGG + chr6_4:77720248-77720267 Msa0997680:intron 45.0%
GGAGGCAATTCCAATGCTAA+GGG + chr6_4:77720249-77720268 Msa0997680:intron 45.0%
GGAAAAAGGGTGAAACATGG+GGG - chr6_4:77720376-77720395 None:intergenic 45.0%
TGACCTAGTCAAAGCTGATG+TGG + chr6_4:77720419-77720438 Msa0997680:intron 45.0%
! TGTCCACATCAGCTTTGACT+AGG - chr6_4:77720425-77720444 None:intergenic 45.0%
!!! CACGCCCTTTTGTTTTTCCT+TGG + chr6_4:77720626-77720645 Msa0997680:intron 45.0%
!!! TTTTCCCTGGTGTCGGTATA+AGG + chr6_4:77720650-77720669 Msa0997680:intron 45.0%
GGTATAAGGATCCGTGTGAA+GGG + chr6_4:77720664-77720683 Msa0997680:intron 45.0%
AACAGAGTAAGAAAGGGAGG+AGG + chr6_4:77720736-77720755 Msa0997680:intron 45.0%
GGTGAGTAATCACGACTATG+AGG - chr6_4:77721100-77721119 None:intergenic 45.0%
GTGAACGATAGGAGGTTTGA+AGG - chr6_4:77721193-77721212 None:intergenic 45.0%
AACGACAAGTGAACGATAGG+AGG - chr6_4:77721201-77721220 None:intergenic 45.0%
GACAACGACAAGTGAACGAT+AGG - chr6_4:77721204-77721223 None:intergenic 45.0%
AGGTATCCATCATCACTCGT+TGG - chr6_4:77721608-77721627 None:intergenic 45.0%
TGAATCACATGTCCTTGACC+GGG + chr6_4:77721709-77721728 Msa0997680:intron 45.0%
AATCAAGCAAATCCCGGTCA+AGG - chr6_4:77715424-77715443 None:intergenic 45.0%
! CGGGATTTGCTTGATTGTCA+TGG + chr6_4:77715428-77715447 Msa0997680:CDS 45.0%
ACATTCCGCAGCATATAAGG+AGG - chr6_4:77721788-77721807 None:intergenic 45.0%
GTTGCACTAGGGAGAAAAAG+AGG + chr6_4:77722330-77722349 Msa0997680:intron 45.0%
!! GAGGAGGCACCAAAATATTG+TGG + chr6_4:77722349-77722368 Msa0997680:intron 45.0%
! CCATGTTCAACTCGTTTTGG+TGG - chr6_4:77722385-77722404 None:intergenic 45.0%
! CCACCAAAACGAGTTGAACA+TGG + chr6_4:77722382-77722401 Msa0997680:intron 45.0%
ATCCGGTGCTCTTAGTTACA+TGG + chr6_4:77722652-77722671 Msa0997680:intron 45.0%
TTGCAGGAATTGATCGGAGA+AGG + chr6_4:77722864-77722883 Msa0997680:intron 45.0%
CAACATACTCAAGAAGGTGG+AGG + chr6_4:77723020-77723039 Msa0997680:CDS 45.0%
AAGGTGGAGGAAGTTGACAA+GGG + chr6_4:77712927-77712946 Msa0997680:CDS 45.0%
AGAGCTAGATGCTGACATTG+AGG + chr6_4:77723122-77723141 Msa0997680:CDS 45.0%
AGAGTTCCATGGTGACATTG+AGG + chr6_4:77723294-77723313 Msa0997680:intron 45.0%
GGAATAACTGAAGAAGGTCG+AGG + chr6_4:77723373-77723392 Msa0997680:intron 45.0%
TCAAGATCAGCAGGGCAATA+GGG - chr6_4:77723418-77723437 None:intergenic 45.0%
ATCAAGATCAGCAGGGCAAT+AGG - chr6_4:77723419-77723438 None:intergenic 45.0%
CCCTGCTGATCTTGATTTAG+AGG + chr6_4:77712965-77712984 Msa0997680:CDS 45.0%
CAATCCGAACCAAACCAATG+AGG - chr6_4:77723554-77723573 None:intergenic 45.0%
!! CCTTAACTTGTACAGTGCTC+TGG - chr6_4:77723712-77723731 None:intergenic 45.0%
!! CCAGAGCACTGTACAAGTTA+AGG + chr6_4:77723709-77723728 Msa0997680:intron 45.0%
! ATTTTCCACAGCAGTTCGGT+GGG + chr6_4:77723881-77723900 Msa0997680:intron 45.0%
CCAACTGAGTTAATCTCACG+GGG + chr6_4:77723932-77723951 Msa0997680:intron 45.0%
!!! TTAATTTTGAATAAAATTAT+AGG - chr6_4:77716794-77716813 None:intergenic 5.0%
!! AAAAAATAAAATTTAATCTT+TGG + chr6_4:77718383-77718402 Msa0997680:intron 5.0%
!!! AATACATTTTAATTTTATTA+CGG - chr6_4:77719648-77719667 None:intergenic 5.0%
TTTGACCGAAGAGCCGAAGA+AGG + chr6_4:77712908-77712927 Msa0997680:CDS 50.0%
! TTGCTGCTTCGATGTCACCA+TGG - chr6_4:77713025-77713044 None:intergenic 50.0%
GCAATAACTGCTTCACGCTG+TGG - chr6_4:77713786-77713805 None:intergenic 50.0%
CAGCGTGAAGCAGTTATTGC+AGG + chr6_4:77713786-77713805 Msa0997680:intron 50.0%
GCGTGAAGCAGTTATTGCAG+GGG + chr6_4:77713788-77713807 Msa0997680:intron 50.0%
GGATCCAGGTCCGAAGTTTA+GGG + chr6_4:77713809-77713828 Msa0997680:intron 50.0%
GATCCAGGTCCGAAGTTTAG+GGG + chr6_4:77713810-77713829 Msa0997680:intron 50.0%
CTTGACCATTCGCCTCGTAT+AGG - chr6_4:77714264-77714283 None:intergenic 50.0%
! GGTCAAGAGTGTGTGGTCAA+AGG + chr6_4:77714390-77714409 Msa0997680:intron 50.0%
GGTGAGCAATCACGACTATG+AGG - chr6_4:77714786-77714805 None:intergenic 50.0%
TGAATCGCATGTCCTTGACC+GGG + chr6_4:77715409-77715428 Msa0997680:CDS 50.0%
CTGCGATGCTGCTACTAGAT+TGG + chr6_4:77715689-77715708 Msa0997680:intron 50.0%
TCTGGTTACTGGAAGGCAAC+TGG + chr6_4:77716048-77716067 Msa0997680:intron 50.0%
TACAGAGGGAAACCACCTCA+TGG + chr6_4:77716138-77716157 Msa0997680:CDS 50.0%
AGAAAGACTGACCAAGGGGT+TGG - chr6_4:77716214-77716233 None:intergenic 50.0%
CCAAAGTTGCTGCCATTGCT+TGG - chr6_4:77716398-77716417 None:intergenic 50.0%
CCAAGCAATGGCAGCAACTT+TGG + chr6_4:77716395-77716414 Msa0997680:CDS 50.0%
AGCAATGGCAGCAACTTTGG+TGG + chr6_4:77716398-77716417 Msa0997680:CDS 50.0%
GCAATGGCAGCAACTTTGGT+GGG + chr6_4:77716399-77716418 Msa0997680:CDS 50.0%
CAATGGCAGCAACTTTGGTG+GGG + chr6_4:77716400-77716419 Msa0997680:CDS 50.0%
GTGCTTGCTCTCCAAGTCAT+TGG + chr6_4:77716563-77716582 Msa0997680:intron 50.0%
ATCAGGTAGCCCGCACATAT+TGG + chr6_4:77718299-77718318 Msa0997680:intron 50.0%
! ACATCTGGGATACGAGCGAT+AGG - chr6_4:77718335-77718354 None:intergenic 50.0%
!! GGGAAGTATCGGGCAGATAT+CGG + chr6_4:77718426-77718445 Msa0997680:intron 50.0%
GATATCGGTGCAGGATACGT+AGG + chr6_4:77718441-77718460 Msa0997680:intron 50.0%
TATCGGTGCAGGATACGTAG+GGG + chr6_4:77718443-77718462 Msa0997680:intron 50.0%
ATCTGGGCTTAACAGCTCAC+AGG + chr6_4:77718492-77718511 Msa0997680:intron 50.0%
CGACGATGAGACAAGATCTG+AGG - chr6_4:77718790-77718809 None:intergenic 50.0%
ATCACCTTCTGCGGCACATA+AGG - chr6_4:77719342-77719361 None:intergenic 50.0%
CAGGGTCTTTCCTACGAATC+TGG + chr6_4:77719594-77719613 Msa0997680:intron 50.0%
GGTCTTTCCTACGAATCTGG+AGG + chr6_4:77719597-77719616 Msa0997680:intron 50.0%
ATCCGAACCTCCAGATTCGT+AGG - chr6_4:77719607-77719626 None:intergenic 50.0%
GCAAACCGCTCAATGGAACT+GGG - chr6_4:77719840-77719859 None:intergenic 50.0%
TGCAAACCGCTCAATGGAAC+TGG - chr6_4:77719841-77719860 None:intergenic 50.0%
!! TTGCAGGTATTGATCGGAGG+AGG + chr6_4:77720231-77720250 Msa0997680:intron 50.0%
!! CCTTGGTTTTTCCCTGGTGT+CGG + chr6_4:77720643-77720662 Msa0997680:intron 50.0%
GGATCCTTATACCGACACCA+GGG - chr6_4:77720657-77720676 None:intergenic 50.0%
CGGTATAAGGATCCGTGTGA+AGG + chr6_4:77720663-77720682 Msa0997680:intron 50.0%
ATAAGGATCCGTGTGAAGGG+AGG + chr6_4:77720667-77720686 Msa0997680:intron 50.0%
TTTGACCTCCTCCCTTCACA+CGG - chr6_4:77720678-77720697 None:intergenic 50.0%
GGTGCTAGAGCTACAACATC+CGG + chr6_4:77721749-77721768 Msa0997680:intron 50.0%
!! AGGAGGTTGATTTGGATGGC+CGG - chr6_4:77721771-77721790 None:intergenic 50.0%
GCACTAGGGAGAAAAAGAGG+AGG + chr6_4:77722333-77722352 Msa0997680:intron 50.0%
GCACCAAAATATTGTGGGCG+TGG + chr6_4:77722355-77722374 Msa0997680:intron 50.0%
! CGACCACGCCCACAATATTT+TGG - chr6_4:77722361-77722380 None:intergenic 50.0%
TGAACCACCTACTCTCGCAA+AGG + chr6_4:77722408-77722427 Msa0997680:intron 50.0%
GATGCTACCTTTGCGAGAGT+AGG - chr6_4:77722418-77722437 None:intergenic 50.0%
GAAGGTGGAGGAAGTTGACA+AGG + chr6_4:77712926-77712945 Msa0997680:CDS 50.0%
ATGCTGCCTCAATGTCACCA+TGG - chr6_4:77723303-77723322 None:intergenic 50.0%
! CTTGTACAGTGCTCTGGATC+AGG - chr6_4:77723706-77723725 None:intergenic 50.0%
! GATTTTCCACAGCAGTTCGG+TGG + chr6_4:77723880-77723899 Msa0997680:intron 50.0%
CCCCGTGAGATTAACTCAGT+TGG - chr6_4:77723935-77723954 None:intergenic 50.0%
CTCCACCTTCTTCGGCTCTT+CGG - chr6_4:77712916-77712935 None:intergenic 55.0%
AGAGCTCCATGGTGGCATTG+AGG + chr6_4:77713175-77713194 Msa0997680:intron 55.0%
ATGCTGCCTCAATGCCACCA+TGG - chr6_4:77713184-77713203 None:intergenic 55.0%
CAAGATCGGCAGGGGCAATA+AGG - chr6_4:77713299-77713318 None:intergenic 55.0%
GCAGTTATTGCAGGGGATCC+AGG + chr6_4:77713795-77713814 Msa0997680:intron 55.0%
GGGATCCAGGTCCGAAGTTT+AGG + chr6_4:77713808-77713827 Msa0997680:intron 55.0%
GGCTTCCTATACGAGGCGAA+TGG + chr6_4:77714256-77714275 Msa0997680:intron 55.0%
! GGCAAGTGGTCAAGAGTGTG+TGG + chr6_4:77714383-77714402 Msa0997680:intron 55.0%
GGTGATAGAGCCCCTACATC+TGG + chr6_4:77715449-77715468 Msa0997680:CDS 55.0%
GATAGAGCCCCTACATCTGG+AGG + chr6_4:77715452-77715471 Msa0997680:CDS 55.0%
GGTTGGAGTGAGAGGAAGTG+AGG - chr6_4:77716197-77716216 None:intergenic 55.0%
TTCCTCTCACTCCAACCCCT+TGG + chr6_4:77716200-77716219 Msa0997680:CDS 55.0%
!! AGGACAGGTTGGTGAGGGTA+GGG - chr6_4:77717553-77717572 None:intergenic 55.0%
!! AAGGACAGGTTGGTGAGGGT+AGG - chr6_4:77717554-77717573 None:intergenic 55.0%
! TCTGGGATACGAGCGATAGG+TGG - chr6_4:77718332-77718351 None:intergenic 55.0%
TATCGGGCAGATATCGGTGC+AGG + chr6_4:77718432-77718451 Msa0997680:intron 55.0%
AATGAAGCACAGCCCGTCCA+AGG - chr6_4:77719275-77719294 None:intergenic 55.0%
ACCTCCTTATGTGCCGCAGA+AGG + chr6_4:77719335-77719354 Msa0997680:CDS 55.0%
ACCTTCTGCGGCACATAAGG+AGG - chr6_4:77719339-77719358 None:intergenic 55.0%
!!! GTGGGTGTTTTTTGGGAGGG+TGG - chr6_4:77719756-77719775 None:intergenic 55.0%
TATATCAGGGCCGGACCTTG+GGG - chr6_4:77719866-77719885 None:intergenic 55.0%
CTATATCAGGGCCGGACCTT+GGG - chr6_4:77719867-77719886 None:intergenic 55.0%
CCGACACCAGGGAAAAACCA+AGG - chr6_4:77720646-77720665 None:intergenic 55.0%
CGGATCCTTATACCGACACC+AGG - chr6_4:77720658-77720677 None:intergenic 55.0%
GCTACCTTTGCGAGAGTAGG+TGG - chr6_4:77722415-77722434 None:intergenic 55.0%
ACTATCCCACCGAACTGCTG+TGG - chr6_4:77723889-77723908 None:intergenic 55.0%
GACCGAAGAGCCGAAGAAGG+TGG + chr6_4:77712911-77712930 Msa0997680:CDS 60.0%
CGAAGAGCCGAAGAAGGTGG+AGG + chr6_4:77712914-77712933 Msa0997680:CDS 60.0%
CGACCCCTAAACTTCGGACC+TGG - chr6_4:77713816-77713835 None:intergenic 60.0%
GGTCCGAAGTTTAGGGGTCG+TGG + chr6_4:77713816-77713835 Msa0997680:intron 60.0%
GACCAAGGGGTTGGAGTGAG+AGG - chr6_4:77716205-77716224 None:intergenic 60.0%
AATGTTCGAGGCCCACACCC+AGG + chr6_4:77716937-77716956 Msa0997680:intron 60.0%
ATGTTCGAGGCCCACACCCA+GGG + chr6_4:77716938-77716957 Msa0997680:intron 60.0%
!! GGACAGGTTGGTGAGGGTAG+GGG - chr6_4:77717552-77717571 None:intergenic 60.0%
CTTAGGCCCATACCTTCGGG+AGG + chr6_4:77719814-77719833 Msa0997680:intron 60.0%
! ACTGGGCCTCCCGAAGGTAT+GGG - chr6_4:77719823-77719842 None:intergenic 60.0%
AACTGGGCCTCCCGAAGGTA+TGG - chr6_4:77719824-77719843 None:intergenic 60.0%
AATGGAACTGGGCCTCCCGA+AGG - chr6_4:77719829-77719848 None:intergenic 60.0%
GGAGGCCCAGTTCCATTGAG+CGG + chr6_4:77719832-77719851 Msa0997680:intron 60.0%
GGGGTGTGCAAACCGCTCAA+TGG - chr6_4:77719847-77719866 None:intergenic 60.0%
TGAGCGGTTTGCACACCCCA+AGG + chr6_4:77719848-77719867 Msa0997680:intron 60.0%
GGTTTGCACACCCCAAGGTC+CGG + chr6_4:77719853-77719872 Msa0997680:intron 60.0%
CCTATATCAGGGCCGGACCT+TGG - chr6_4:77719868-77719887 None:intergenic 60.0%
CCAAGGTCCGGCCCTGATAT+AGG + chr6_4:77719865-77719884 Msa0997680:intron 60.0%
AGGATCCGTGTGAAGGGAGG+AGG + chr6_4:77720670-77720689 Msa0997680:intron 60.0%
TGTTCGAGGCCCACACCCAG+GGG + chr6_4:77716939-77716958 Msa0997680:intron 65.0%
AGCACAGCCCGTCCAAGGAC+AGG - chr6_4:77719270-77719289 None:intergenic 65.0%
CCGCGAACACCCCTGGGTGT+GGG - chr6_4:77716951-77716970 None:intergenic 70.0%
!! CCCACACCCAGGGGTGTTCG+CGG + chr6_4:77716948-77716967 Msa0997680:intron 70.0%
ACCGCGAACACCCCTGGGTG+TGG - chr6_4:77716952-77716971 None:intergenic 70.0%
!! ACCCAGGGGTGTTCGCGGTC+CGG + chr6_4:77716953-77716972 Msa0997680:intron 70.0%
ACCGGACCGCGAACACCCCT+GGG - chr6_4:77716957-77716976 None:intergenic 70.0%
AACCGGACCGCGAACACCCC+TGG - chr6_4:77716958-77716977 None:intergenic 70.0%
! GGGGTGTTCGCGGTCCGGTT+TGG + chr6_4:77716958-77716977 Msa0997680:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 77712903 77724115 77712903 ID=Msa0997680;Name=Msa0997680
chr6_4 mRNA 77712903 77724115 77712903 ID=Msa0997680-mRNA-1;Parent=Msa0997680;Name=Msa0997680-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|0.85|0.16|0.28|7|0|323
chr6_4 exon 77712903 77713075 77712903 ID=Msa0997680-mRNA-1:exon:14662;Parent=Msa0997680-mRNA-1
chr6_4 exon 77715313 77715505 77715313 ID=Msa0997680-mRNA-1:exon:14663;Parent=Msa0997680-mRNA-1
chr6_4 exon 77716063 77716221 77716063 ID=Msa0997680-mRNA-1:exon:14664;Parent=Msa0997680-mRNA-1
chr6_4 exon 77716311 77716421 77716311 ID=Msa0997680-mRNA-1:exon:14665;Parent=Msa0997680-mRNA-1
chr6_4 exon 77719231 77719356 77719231 ID=Msa0997680-mRNA-1:exon:14666;Parent=Msa0997680-mRNA-1
chr6_4 exon 77722940 77723143 77722940 ID=Msa0997680-mRNA-1:exon:14667;Parent=Msa0997680-mRNA-1
chr6_4 exon 77724110 77724115 77724110 ID=Msa0997680-mRNA-1:exon:14668;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77712903 77713075 77712903 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77715313 77715505 77715313 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77716063 77716221 77716063 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77716311 77716421 77716311 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77719231 77719356 77719231 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77722940 77723143 77722940 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
chr6_4 CDS 77724110 77724115 77724110 ID=Msa0997680-mRNA-1:cds;Parent=Msa0997680-mRNA-1
Gene Sequence

>Msa0997680

ATGAGTTTGACCGAAGAGCCGAAGAAGGTGGAGGAAGTTGACAAAGGTAAAGTCCCTATATCCCCTGCTGATCTTGATTTAGAAGAACTTCTAAAAGTGAAGGCTTCATTGAAAGAGCTCCATGGTGACATCGAAGCAGCAACATATTTGCTTTTCCTTTCGAAGAAACCTTTTGATGATGGATACCATATGTATCAAAATATTCTTCGTGGAATATCGAATTCCAATCAAATCAACGAAGTACCAACCATATCGAATTTCAATCTAATTGAATCGCATGTCCTTGACCGGGATTTGCTTGATTGTCATGGTGATAGAGCCCCTACATCTGGAGGTCGAAATCAACTTCCTTATATGCTGCAGAAGGCAACTGGTTTGGACAAACAAATCATGAATTCAAAGACTCGTGAAGTTCTTGGTATGAAGAAAACTCATGTTTTCTACAGAGGGAAACCACCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGAATGAAAATTGGGTTCGGTGTCGCATATTTCTGAAGAGGAGAGGTGGTGCTAAAAATGGAGAAGAGACAGTGAAAGGAGTGAAGCCAAGCAATGGCAGCAACTTTGGTGGGTACCAAATGATATCGACTTTTGGTGAAATTGAATATCCTGTCCTTGGACGGGCTGTGCTTCATTGTCATGAAGCTAGAGCTACAACATCATGCCATCGAATTCAACCTCCTTATGTGCCGCAGAAGTTTGCGACTGAAGAGTACCTTCATGAAGGACAATTTGTATCATCAAGGCAAAATGTTAAGCCTTCTCAAAATCAAAGCATCAACATACTCAAGAAGGTGGAGGAAGTTGACAAGGGTAAAGTCTCTATTTCCCTTGCTGATCTTGATTTAGAGGAACTTCTAAAAGTGAAGGCTTCATTGAAAGAGCTAGATGCTGACATTGAGGACTAA
Protein sequence

>Msa0997680

MSLTEEPKKVEEVDKGKVPISPADLDLEELLKVKASLKELHGDIEAATYLLFLSKKPFDDGYHMYQNILRGISNSNQINEVPTISNFNLIESHVLDRDLLDCHGDRAPTSGGRNQLPYMLQKATGLDKQIMNSKTREVLGMKKTHVFYRGKPPHGSRTDWIMHEYRLTSSHSNPLNENWVRCRIFLKRRGGAKNGEETVKGVKPSNGSNFGGYQMISTFGEIEYPVLGRAVLHCHEARATTSCHRIQPPYVPQKFATEEYLHEGQFVSSRQNVKPSQNQSINILKKVEEVDKGKVSISLADLDLEELLKVKASLKELDADIED*