Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0998350 | XP_013451804.1 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0998350 | sp|Q9MA75|VIP1_ARATH | 45.345 | 333 | 123 | 13 | 8 | 287 | 6 | 332 | 1.40e-65 | 212 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0998350 | A0A072U839 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
Gene ID | Type | Classification |
---|---|---|
Msa0998350 | TF | bZIP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0998350 | MtrunA17_Chr6g0463571 | 98.065 | 310 | 6 | 0 | 1 | 310 | 1 | 310 | 0.0 | 621 |
Msa0998350 | MtrunA17_Chr5g0432701 | 52.459 | 244 | 84 | 9 | 26 | 261 | 49 | 268 | 6.58e-61 | 197 |
Msa0998350 | MtrunA17_Chr3g0107491 | 44.369 | 293 | 107 | 14 | 26 | 281 | 36 | 309 | 1.30e-51 | 174 |
Msa0998350 | MtrunA17_Chr4g0036071 | 57.714 | 175 | 66 | 3 | 76 | 243 | 279 | 452 | 2.13e-49 | 171 |
Msa0998350 | MtrunA17_Chr3g0128781 | 49.541 | 218 | 84 | 6 | 28 | 243 | 7 | 200 | 4.00e-49 | 166 |
Msa0998350 | MtrunA17_Chr2g0329551 | 57.143 | 168 | 57 | 4 | 107 | 260 | 168 | 334 | 4.71e-47 | 163 |
Msa0998350 | MtrunA17_Chr1g0156051 | 47.273 | 220 | 97 | 7 | 74 | 281 | 303 | 515 | 1.59e-33 | 129 |
Msa0998350 | MtrunA17_Chr2g0316551 | 49.474 | 95 | 48 | 0 | 149 | 243 | 206 | 300 | 1.41e-20 | 90.5 |
Msa0998350 | MtrunA17_Chr4g0040891 | 43.103 | 116 | 59 | 1 | 149 | 257 | 192 | 307 | 8.86e-19 | 85.1 |
Msa0998350 | MtrunA17_Chr2g0325131 | 47.000 | 100 | 53 | 0 | 149 | 248 | 189 | 288 | 8.93e-19 | 85.5 |
Msa0998350 | MtrunA17_Chr1g0202051 | 35.000 | 220 | 126 | 6 | 31 | 245 | 11 | 218 | 3.83e-18 | 82.8 |
Msa0998350 | MtrunA17_Chr8g0380611 | 30.153 | 262 | 141 | 11 | 11 | 244 | 75 | 322 | 1.35e-13 | 70.5 |
Msa0998350 | MtrunA17_Chr2g0306581 | 65.306 | 49 | 17 | 0 | 139 | 187 | 1 | 49 | 2.63e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0998350 | AT1G43700.1 | 45.345 | 333 | 123 | 13 | 8 | 287 | 6 | 332 | 1.42e-66 | 212 |
Msa0998350 | AT2G31370.5 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 8.17e-51 | 172 |
Msa0998350 | AT2G31370.2 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G31370.4 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G31370.1 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G31370.7 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G31370.3 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G31370.6 | 60.479 | 167 | 55 | 3 | 109 | 265 | 151 | 316 | 2.05e-50 | 172 |
Msa0998350 | AT2G40620.1 | 46.000 | 250 | 110 | 8 | 2 | 243 | 8 | 240 | 4.23e-49 | 167 |
Msa0998350 | AT4G38900.2 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 4.32e-49 | 172 |
Msa0998350 | AT4G38900.3 | 55.497 | 191 | 62 | 5 | 73 | 243 | 299 | 486 | 4.32e-49 | 172 |
Msa0998350 | AT4G38900.1 | 53.807 | 197 | 62 | 6 | 73 | 243 | 299 | 492 | 1.35e-46 | 165 |
Msa0998350 | AT1G06070.1 | 54.598 | 174 | 63 | 3 | 109 | 273 | 159 | 325 | 1.17e-45 | 160 |
Msa0998350 | AT1G06850.1 | 62.791 | 129 | 47 | 1 | 123 | 251 | 121 | 248 | 2.85e-45 | 157 |
Msa0998350 | AT2G21230.4 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.47e-44 | 159 |
Msa0998350 | AT2G21230.1 | 54.444 | 180 | 66 | 3 | 76 | 243 | 287 | 462 | 1.47e-44 | 159 |
Msa0998350 | AT2G21230.3 | 52.688 | 186 | 66 | 4 | 76 | 243 | 287 | 468 | 2.60e-42 | 153 |
Msa0998350 | AT2G21230.2 | 53.846 | 169 | 62 | 3 | 76 | 232 | 287 | 451 | 3.57e-40 | 146 |
Msa0998350 | AT1G06850.2 | 72.152 | 79 | 21 | 1 | 123 | 201 | 121 | 198 | 8.13e-28 | 108 |
Msa0998350 | AT2G13150.1 | 35.503 | 169 | 93 | 4 | 83 | 244 | 83 | 242 | 6.74e-19 | 84.7 |
Msa0998350 | AT2G42380.2 | 46.465 | 99 | 53 | 0 | 149 | 247 | 184 | 282 | 8.02e-19 | 85.5 |
Msa0998350 | AT3G58120.1 | 47.368 | 95 | 50 | 0 | 149 | 243 | 200 | 294 | 1.43e-18 | 85.1 |
Msa0998350 | AT2G12940.1 | 32.597 | 181 | 108 | 5 | 83 | 260 | 82 | 251 | 1.65e-17 | 81.6 |
Msa0998350 | AT2G12900.1 | 38.235 | 102 | 62 | 1 | 143 | 244 | 109 | 209 | 3.09e-16 | 77.4 |
Msa0998350 | AT2G42380.5 | 45.238 | 84 | 46 | 0 | 149 | 232 | 184 | 267 | 5.47e-15 | 73.9 |
Msa0998350 | AT3G58120.2 | 45.679 | 81 | 44 | 0 | 149 | 229 | 200 | 280 | 5.44e-14 | 71.2 |
Msa0998350 | AT1G58110.1 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 5.18e-13 | 69.3 |
Msa0998350 | AT1G58110.2 | 28.571 | 252 | 135 | 7 | 22 | 244 | 87 | 322 | 5.18e-13 | 69.3 |
Msa0998350 | AT2G21235.1 | 38.235 | 102 | 62 | 1 | 151 | 252 | 359 | 459 | 1.28e-12 | 68.6 |
Msa0998350 | AT2G42380.1 | 41.414 | 99 | 47 | 1 | 149 | 247 | 184 | 271 | 1.46e-12 | 67.4 |
Msa0998350 | AT2G42380.3 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
Msa0998350 | AT2G42380.4 | 64.444 | 45 | 16 | 0 | 149 | 193 | 184 | 228 | 1.78e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGTATCTTCTACTGTTTA+AGG | 0.233915 | 6_4:-79210029 | Msa0998350:three_prime_UTR |
GCATGCCAGGTTGTGTCTGC+TGG | 0.238257 | 6_4:+79210241 | None:intergenic |
AAGACAATTTCCTCAACTTT+AGG | 0.254590 | 6_4:-79215721 | Msa0998350:five_prime_UTR |
CTGAGTGGGAACGGCGGTGG+TGG | 0.309521 | 6_4:+79215406 | None:intergenic |
TTGATTATAGATGGTGGTTA+TGG | 0.327249 | 6_4:-79209884 | Msa0998350:three_prime_UTR |
TTGATCCTAAGAGAGCTAAA+AGG | 0.339939 | 6_4:-79215035 | Msa0998350:intron |
CATAAAACATCATAGGATTA+AGG | 0.340128 | 6_4:+79210048 | None:intergenic |
TGATTTGACTGCTCAGAATA+AGG | 0.343859 | 6_4:-79210969 | Msa0998350:CDS |
AATCATTTGGCTGCCGTTGC+CGG | 0.347670 | 6_4:-79210339 | Msa0998350:CDS |
GGGTTAGGGTTTGGTGGTGA+AGG | 0.352329 | 6_4:-79215195 | Msa0998350:CDS |
TGCAGAAAGTACAAAATAAT+AGG | 0.358743 | 6_4:+79209995 | None:intergenic |
CCCGTTAAATGAAGGATTAC+CGG | 0.363659 | 6_4:+79210320 | None:intergenic |
AAGAACTAGTTGATTATAGA+TGG | 0.363951 | 6_4:-79209893 | Msa0998350:three_prime_UTR |
TGTTGTATACGATCTACTTT+TGG | 0.365809 | 6_4:+79210154 | None:intergenic |
CAACATCAAAGTAAATGATT+TGG | 0.375439 | 6_4:-79210136 | Msa0998350:three_prime_UTR |
GCCGGTAATCCTTCATTTAA+CGG | 0.378261 | 6_4:-79210321 | Msa0998350:CDS |
TATATATACAACATGTTACT+TGG | 0.381317 | 6_4:+79210095 | None:intergenic |
TTTGATGGGTTAGGGTTTGG+TGG | 0.386396 | 6_4:-79215201 | Msa0998350:CDS |
TGCACAACTTACAGTCCTTC+AGG | 0.397567 | 6_4:-79213358 | Msa0998350:intron |
AGAAAGAACTTCAACGCCTT+AGG | 0.400050 | 6_4:-79210371 | Msa0998350:CDS |
CCGGTAATCCTTCATTTAAC+GGG | 0.400994 | 6_4:-79210320 | Msa0998350:CDS |
TCGTGGTCGCTCTAACTTCA+TGG | 0.412681 | 6_4:-79210187 | Msa0998350:CDS |
ACAGCGTCAGGGGACGGGAG+AGG | 0.412739 | 6_4:+79215306 | None:intergenic |
TTGGAACTTGGAAGTGGTGG+TGG | 0.413409 | 6_4:+79215563 | None:intergenic |
GTTTGGTGGTGAAGGGGAAA+AGG | 0.416147 | 6_4:-79215187 | Msa0998350:CDS |
GAACTTGGAAGTGGTGGTGG+TGG | 0.419234 | 6_4:+79215566 | None:intergenic |
GTTAGGGTTTGGTGGTGAAG+GGG | 0.427763 | 6_4:-79215193 | Msa0998350:CDS |
CAGCGTCAGGGGACGGGAGA+GGG | 0.430362 | 6_4:+79215307 | None:intergenic |
TGAGTGGGAACGGCGGTGGT+GGG | 0.433218 | 6_4:+79215407 | None:intergenic |
CATGCCAGGTTGTGTCTGCT+GGG | 0.434483 | 6_4:+79210242 | None:intergenic |
TCCATGGATGGGTCTGAGAT+GGG | 0.439417 | 6_4:-79215126 | Msa0998350:CDS |
GAAGATACATAAAACATCAT+AGG | 0.440019 | 6_4:+79210041 | None:intergenic |
AACATTTACAACATGTTATG+TGG | 0.441333 | 6_4:+79209859 | None:intergenic |
TTCCATGGATGGGTCTGAGA+TGG | 0.446734 | 6_4:-79215127 | Msa0998350:CDS |
GGTTGTGTCTGCTGGGGTTG+AGG | 0.447864 | 6_4:+79210249 | None:intergenic |
GAGATGGGGTTGTTTGAAGT+TGG | 0.453490 | 6_4:-79215111 | Msa0998350:CDS |
TAGGGCGCAAAAGAATCATT+TGG | 0.455099 | 6_4:-79210352 | Msa0998350:CDS |
GGTTAGGGTTTGGTGGTGAA+GGG | 0.457604 | 6_4:-79215194 | Msa0998350:CDS |
AGGGGACGGGAGAGGGAGGT+TGG | 0.458623 | 6_4:+79215314 | None:intergenic |
TTTGTGTTTGTGTTGGAACT+TGG | 0.461107 | 6_4:+79215551 | None:intergenic |
GAACGAGAAGGCGGCATGCC+AGG | 0.461441 | 6_4:+79210228 | None:intergenic |
TTATGAGTTTGTGTTTGTGT+TGG | 0.462086 | 6_4:+79215544 | None:intergenic |
GAAAGAACTTCAACGCCTTA+GGG | 0.472203 | 6_4:-79210370 | Msa0998350:CDS |
ATCGGGACAGCGTCAGGGGA+CGG | 0.485265 | 6_4:+79215300 | None:intergenic |
AGACACCACCTTCCGTTTCG+CGG | 0.485465 | 6_4:-79215385 | Msa0998350:CDS |
GGAAAAGGTTGAAGAGAGGA+AGG | 0.492873 | 6_4:-79215172 | Msa0998350:CDS |
AAGTCAATTATAACTGGTGG+TGG | 0.495733 | 6_4:+79215456 | None:intergenic |
GTCCCCTGACGCTGTCCCGA+TGG | 0.496675 | 6_4:-79215298 | Msa0998350:CDS |
AGAGGAAGGTGAGTAGACAT+AGG | 0.498750 | 6_4:-79215158 | Msa0998350:CDS |
ATCGAAGTCGGACGGGTCGA+AGG | 0.500424 | 6_4:+79215341 | None:intergenic |
GAGAACATCCCGTTAAATGA+AGG | 0.504928 | 6_4:+79210312 | None:intergenic |
GTGTTGGAACTTGGAAGTGG+TGG | 0.505022 | 6_4:+79215560 | None:intergenic |
AGTGGTGGTGGTGGTTGAAG+TGG | 0.505855 | 6_4:+79215575 | None:intergenic |
CGGTGGTGGGTCCCACGTGA+TGG | 0.512907 | 6_4:+79215420 | None:intergenic |
AGAGCGACCACGACCGTTGA+AGG | 0.516566 | 6_4:+79210197 | None:intergenic |
GATCAACCCTTCAACGGTCG+TGG | 0.516911 | 6_4:-79210204 | Msa0998350:CDS |
CAACCCCAGCAGACACAACC+TGG | 0.516981 | 6_4:-79210246 | Msa0998350:CDS |
CGTCGAAGTTTGCCGCGAAA+CGG | 0.519451 | 6_4:+79215373 | None:intergenic |
AACTCGATATACAAGTGAGC+TGG | 0.519563 | 6_4:-79213424 | Msa0998350:CDS |
ATGAGAATGGAACTTGACTT+TGG | 0.521390 | 6_4:+79215689 | None:intergenic |
AACAAGTGTTGTAATGAGAA+TGG | 0.521692 | 6_4:+79215676 | None:intergenic |
TGTCTGAGTGGGAACGGCGG+TGG | 0.521835 | 6_4:+79215403 | None:intergenic |
GGGTTGTTTGAAGTTGGTGA+TGG | 0.524705 | 6_4:-79215105 | Msa0998350:CDS |
TGGACTCATCAGAGTCCATC+GGG | 0.530528 | 6_4:+79215283 | None:intergenic |
AGGTGGTGTCTGAGTGGGAA+CGG | 0.531088 | 6_4:+79215397 | None:intergenic |
CATCGGGAAGTCAGCGTCAG+AGG | 0.531841 | 6_4:-79215262 | Msa0998350:CDS |
AAGGGGAAAAGGTTGAAGAG+AGG | 0.535836 | 6_4:-79215176 | Msa0998350:CDS |
AGGATTACTCATCTGTTGCA+TGG | 0.537744 | 6_4:+79210269 | None:intergenic |
AGTTCAGCAAGTTTCTCAGC+CGG | 0.541555 | 6_4:+79215066 | None:intergenic |
TTTGTGTTGGAACTTGGAAG+TGG | 0.541724 | 6_4:+79215557 | None:intergenic |
AGGTATAGTAGTTCCATGGA+TGG | 0.543947 | 6_4:-79215138 | Msa0998350:CDS |
TGGACTCTGATGAGTCCATC+GGG | 0.544487 | 6_4:-79215278 | Msa0998350:CDS |
TGGTGGGTCCCACGTGATGG+TGG | 0.546686 | 6_4:+79215423 | None:intergenic |
TGGAGATATCGAAGTCGGAC+GGG | 0.546734 | 6_4:+79215334 | None:intergenic |
CGTCAGGGGACGGGAGAGGG+AGG | 0.547402 | 6_4:+79215310 | None:intergenic |
AAGCTTTGCTTGTTGCTCGA+AGG | 0.549248 | 6_4:+79210925 | None:intergenic |
CCCCATCTCAGACCCATCCA+TGG | 0.549369 | 6_4:+79215125 | None:intergenic |
CGTTCTGATCAACCCTTCAA+CGG | 0.556715 | 6_4:-79210210 | Msa0998350:CDS |
TCTAAGTCAATTATAACTGG+TGG | 0.559887 | 6_4:+79215453 | None:intergenic |
AGTCCATCGGGACAGCGTCA+GGG | 0.559909 | 6_4:+79215295 | None:intergenic |
GGAAGTCAGCGTCAGAGGGA+CGG | 0.567008 | 6_4:-79215257 | Msa0998350:CDS |
CCATGGATGGGTCTGAGATG+GGG | 0.569336 | 6_4:-79215125 | Msa0998350:CDS |
GAGCGACCACGACCGTTGAA+GGG | 0.569915 | 6_4:+79210198 | None:intergenic |
ATATATACAACATGTTACTT+GGG | 0.571912 | 6_4:+79210096 | None:intergenic |
ACATAGGTATAGTAGTTCCA+TGG | 0.575020 | 6_4:-79215142 | Msa0998350:CDS |
AACTAGTTGATTATAGATGG+TGG | 0.578755 | 6_4:-79209890 | Msa0998350:three_prime_UTR |
ATGGACTCTGATGAGTCCAT+CGG | 0.585619 | 6_4:-79215279 | Msa0998350:CDS |
ACGGAAGGTGGTGTCTGAGT+GGG | 0.588249 | 6_4:+79215392 | None:intergenic |
GCATCTCAGGAGTTTGTCTG+TGG | 0.588489 | 6_4:-79215235 | Msa0998350:CDS |
ATGGACTCATCAGAGTCCAT+CGG | 0.588783 | 6_4:+79215282 | None:intergenic |
GAAGTTTGCCGCGAAACGGA+AGG | 0.589986 | 6_4:+79215377 | None:intergenic |
CTGCTGCACGATCGAAAGAG+AGG | 0.598234 | 6_4:-79213449 | Msa0998350:CDS |
GATATACAAGTGAGCTGGAG+AGG | 0.598508 | 6_4:-79213419 | Msa0998350:CDS |
CAACAAGCAAAGCTTAGAGA+AGG | 0.603588 | 6_4:-79210917 | Msa0998350:intron |
TTGGAGATATCGAAGTCGGA+CGG | 0.611978 | 6_4:+79215333 | None:intergenic |
GGTATAGTAGTTCCATGGAT+GGG | 0.613894 | 6_4:-79215137 | Msa0998350:CDS |
AAATGAAGGATTACCGGCAA+CGG | 0.623798 | 6_4:+79210326 | None:intergenic |
AACGGAAGGTGGTGTCTGAG+TGG | 0.626499 | 6_4:+79215391 | None:intergenic |
GAAAACATGCCACCATCACG+TGG | 0.629605 | 6_4:-79215432 | Msa0998350:CDS |
TGGTGTCTGAGTGGGAACGG+CGG | 0.631875 | 6_4:+79215400 | None:intergenic |
GAGGTTGGAGATATCGAAGT+CGG | 0.632312 | 6_4:+79215329 | None:intergenic |
TGGTGTGAAGAAATCTATGC+CGG | 0.640871 | 6_4:-79215085 | Msa0998350:CDS |
AAGGGTTGATCAGAACGAGA+AGG | 0.660536 | 6_4:+79210216 | None:intergenic |
GGTTGATCAGAACGAGAAGG+CGG | 0.661757 | 6_4:+79210219 | None:intergenic |
ATGCCAGGTTGTGTCTGCTG+GGG | 0.664418 | 6_4:+79210243 | None:intergenic |
GTTTGCCGCGAAACGGAAGG+TGG | 0.671587 | 6_4:+79215380 | None:intergenic |
ATTCTGAGCAGTCAAATCAG+TGG | 0.697438 | 6_4:+79210973 | None:intergenic |
GGACTGTAAGTTGTGCAGAG+AGG | 0.716589 | 6_4:+79213364 | None:intergenic |
AAAACATGCCACCATCACGT+GGG | 0.739972 | 6_4:-79215431 | Msa0998350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATTTTTAGTTTTTCTTA+TGG | - | chr6_4:79210092-79210111 | Msa0998350:three_prime_UTR | 10.0% |
!! | TTATTTATGTACTAAATTTA+AGG | - | chr6_4:79210658-79210677 | Msa0998350:intron | 10.0% |
!! | ATATAAGTTTAATGAATATG+TGG | - | chr6_4:79210736-79210755 | Msa0998350:intron | 15.0% |
!! | TATATGATAGAATATTATAG+CGG | - | chr6_4:79210764-79210783 | Msa0998350:intron | 15.0% |
!! | GTAAACGTATATATAATTTA+CGG | + | chr6_4:79211355-79211374 | None:intergenic | 15.0% |
!!! | TTATTTTGTAATGGATAATT+TGG | - | chr6_4:79211677-79211696 | Msa0998350:intron | 15.0% |
!! | GAAAAAAAAAATAGATGAAA+TGG | - | chr6_4:79212043-79212062 | Msa0998350:intron | 15.0% |
!!! | ACAAAATTTAGTTATTTTCT+TGG | - | chr6_4:79214049-79214068 | Msa0998350:intron | 15.0% |
!!! | TTTTCTAAGTCAATTATAAC+TGG | + | chr6_4:79210147-79210166 | None:intergenic | 20.0% |
!! | AAATTGTATGTGTTTATGAT+CGG | - | chr6_4:79210987-79211006 | Msa0998350:intron | 20.0% |
!!! | ATGTGTCTTTTATTTTGTAA+TGG | - | chr6_4:79211668-79211687 | Msa0998350:intron | 20.0% |
!! | AAAAAACATCTTAAAACAAC+GGG | + | chr6_4:79211731-79211750 | None:intergenic | 20.0% |
!! | GAAAAAACATCTTAAAACAA+CGG | + | chr6_4:79211732-79211751 | None:intergenic | 20.0% |
!!! | ATTTTGACCTATATTTCAAA+TGG | - | chr6_4:79211821-79211840 | Msa0998350:intron | 20.0% |
!!! | TGTGTGTTTTATTTTGTAAT+TGG | - | chr6_4:79211943-79211962 | Msa0998350:intron | 20.0% |
!! | ATACATACAAATGTATAGTT+TGG | - | chr6_4:79212505-79212524 | Msa0998350:intron | 20.0% |
!! | AAAGACTTAAAAGATTTGTA+TGG | + | chr6_4:79212937-79212956 | None:intergenic | 20.0% |
!! | TATTAAGTGTTCTATGAAAT+GGG | - | chr6_4:79212960-79212979 | Msa0998350:intron | 20.0% |
!! | CAGTTAAAATTTGATCAAAA+CGG | + | chr6_4:79212987-79213006 | None:intergenic | 20.0% |
!! | AAGATACTGTGATTAATTTA+TGG | + | chr6_4:79213664-79213683 | None:intergenic | 20.0% |
!! | AAATGTGCAAAAGAATAAAA+AGG | - | chr6_4:79214561-79214580 | Msa0998350:intron | 20.0% |
!! | TTCAATAAAGATGTGATAAA+GGG | + | chr6_4:79214753-79214772 | None:intergenic | 20.0% |
!! | ATTCAATAAAGATGTGATAA+AGG | + | chr6_4:79214754-79214773 | None:intergenic | 20.0% |
!! | TTATCACATCTTTATTGAAT+TGG | - | chr6_4:79214754-79214773 | Msa0998350:intron | 20.0% |
!!! | TTGTAGCATAGTTTTAAAAA+AGG | + | chr6_4:79214861-79214880 | None:intergenic | 20.0% |
!! | TTACCATTTAAATATGAACA+TGG | - | chr6_4:79215163-79215182 | Msa0998350:CDS | 20.0% |
!!! | ATATATACAACATGTTACTT+GGG | + | chr6_4:79215501-79215520 | None:intergenic | 20.0% |
!! | TATATATACAACATGTTACT+TGG | + | chr6_4:79215502-79215521 | None:intergenic | 20.0% |
!! | ACTGAAAAACAAATTTCAAA+GGG | + | chr6_4:79215646-79215665 | None:intergenic | 20.0% |
!! | AACTGAAAAACAAATTTCAA+AGG | + | chr6_4:79215647-79215666 | None:intergenic | 20.0% |
!!! | CACTTTTTGAAGTTTGTTTT+CGG | - | chr6_4:79210624-79210643 | Msa0998350:intron | 25.0% |
! | GTTAAGAAACATTGAGTATT+GGG | - | chr6_4:79210877-79210896 | Msa0998350:intron | 25.0% |
!! | CTTCTCTTAAAAGTTTTTCT+AGG | + | chr6_4:79211104-79211123 | None:intergenic | 25.0% |
! | TTAATAAACCATCGTAAGTA+GGG | + | chr6_4:79211502-79211521 | None:intergenic | 25.0% |
! | TTTAATAAACCATCGTAAGT+AGG | + | chr6_4:79211503-79211522 | None:intergenic | 25.0% |
! | ATCAAATTCACAAACACAAT+TGG | + | chr6_4:79211621-79211640 | None:intergenic | 25.0% |
!!! | TGTAGTTGATTCTAAGATTA+GGG | - | chr6_4:79211791-79211810 | Msa0998350:intron | 25.0% |
!! | GGATTAACCATTTGAAATAT+AGG | + | chr6_4:79211831-79211850 | None:intergenic | 25.0% |
! | TATTTCAAATGGTTAATCCT+AGG | - | chr6_4:79211832-79211851 | Msa0998350:intron | 25.0% |
! | AAAATAGATGAAATGGTCTT+TGG | - | chr6_4:79212050-79212069 | Msa0998350:intron | 25.0% |
!! | AAATATTGTTTGTGTTTTGC+AGG | - | chr6_4:79212103-79212122 | Msa0998350:intron | 25.0% |
! | ATCTACATCATTGTTAAAGA+TGG | + | chr6_4:79212363-79212382 | None:intergenic | 25.0% |
! | TTCAGTGTAATCATATGTAT+TGG | + | chr6_4:79212648-79212667 | None:intergenic | 25.0% |
!! | TCATATTCCTCTTTTATCAA+AGG | - | chr6_4:79212837-79212856 | Msa0998350:intron | 25.0% |
!! | CATATTCCTCTTTTATCAAA+GGG | - | chr6_4:79212838-79212857 | Msa0998350:intron | 25.0% |
!! | ATATTCCTCTTTTATCAAAG+GGG | - | chr6_4:79212839-79212858 | Msa0998350:intron | 25.0% |
! | CTATTAAGTGTTCTATGAAA+TGG | - | chr6_4:79212959-79212978 | Msa0998350:intron | 25.0% |
! | ATTAAGTGTTCTATGAAATG+GGG | - | chr6_4:79212961-79212980 | Msa0998350:intron | 25.0% |
! | ATGCAATCATAATCAAAATG+AGG | + | chr6_4:79213065-79213084 | None:intergenic | 25.0% |
!! | CTTTGAAAACATAGAAAGTA+GGG | + | chr6_4:79213148-79213167 | None:intergenic | 25.0% |
!! | ACTTTGAAAACATAGAAAGT+AGG | + | chr6_4:79213149-79213168 | None:intergenic | 25.0% |
! | TAAATCGTGTAAAATAGGAT+TGG | + | chr6_4:79213293-79213312 | None:intergenic | 25.0% |
! | ATAGCTAAATCGTGTAAAAT+AGG | + | chr6_4:79213298-79213317 | None:intergenic | 25.0% |
!!! | ATCTTTTAGTTAGGAAAACA+TGG | + | chr6_4:79213364-79213383 | None:intergenic | 25.0% |
! | CAGAAAAATCTTATACCATA+TGG | + | chr6_4:79213457-79213476 | None:intergenic | 25.0% |
!!! | TGGTTTTATTTTCGAAAACT+AGG | + | chr6_4:79213568-79213587 | None:intergenic | 25.0% |
! | AGTTGGTTGTTACATAAATT+TGG | + | chr6_4:79213588-79213607 | None:intergenic | 25.0% |
! | ATTAATCACAGTATCTTGTT+AGG | - | chr6_4:79213667-79213686 | Msa0998350:intron | 25.0% |
!! | CATTTTATATGCCAATTTTG+TGG | - | chr6_4:79213789-79213808 | Msa0998350:intron | 25.0% |
! | TCTCAGTAGTAAATACTTAA+GGG | + | chr6_4:79213967-79213986 | None:intergenic | 25.0% |
! | GAGAAATAAGTGAAATGATA+TGG | - | chr6_4:79213987-79214006 | Msa0998350:intron | 25.0% |
! | GAAATGATATGGTAAAGTTT+AGG | - | chr6_4:79213998-79214017 | Msa0998350:intron | 25.0% |
! | ATTCCATTTAGTTACTTCTA+TGG | - | chr6_4:79214134-79214153 | Msa0998350:intron | 25.0% |
! | ATTCCATAGAAGTAACTAAA+TGG | + | chr6_4:79214140-79214159 | None:intergenic | 25.0% |
! | AAAAATATCTGTCTTAAGGA+TGG | + | chr6_4:79214316-79214335 | None:intergenic | 25.0% |
! | ACTCAAAAATATCTGTCTTA+AGG | + | chr6_4:79214320-79214339 | None:intergenic | 25.0% |
!!! | ACAGATATTTTTGAGTAAAG+TGG | - | chr6_4:79214324-79214343 | Msa0998350:intron | 25.0% |
! | CATCTAAAAATCACATGAAA+AGG | + | chr6_4:79214421-79214440 | None:intergenic | 25.0% |
!!! | CTTTTCATGTGATTTTTAGA+TGG | - | chr6_4:79214419-79214438 | Msa0998350:intron | 25.0% |
!! | ATCATAGATATTTGATGACT+TGG | + | chr6_4:79214464-79214483 | None:intergenic | 25.0% |
! | TTTCTTGATCCATAAAAAAG+TGG | - | chr6_4:79214716-79214735 | Msa0998350:intron | 25.0% |
!!! | AAGCAAAATCCACTTTTTTA+TGG | + | chr6_4:79214728-79214747 | None:intergenic | 25.0% |
! | TCAATAAAGATGTGATAAAG+GGG | + | chr6_4:79214752-79214771 | None:intergenic | 25.0% |
!! | TATTGAATTGGACTAGAAAA+AGG | - | chr6_4:79214766-79214785 | Msa0998350:intron | 25.0% |
! | TAAAACTATGCTACAAAAGT+TGG | - | chr6_4:79214865-79214884 | Msa0998350:intron | 25.0% |
!! | TTTTGCATCATTTACGATTT+TGG | - | chr6_4:79214913-79214932 | Msa0998350:intron | 25.0% |
!! | TCGGATATTTTCAAAACTAA+GGG | + | chr6_4:79214940-79214959 | None:intergenic | 25.0% |
!! | ATCGGATATTTTCAAAACTA+AGG | + | chr6_4:79214941-79214960 | None:intergenic | 25.0% |
!!! | GTTGCTTTTGTGATATAAAT+CGG | - | chr6_4:79215046-79215065 | Msa0998350:CDS | 25.0% |
! | TTCAAGCAATGATATTTCTT+TGG | + | chr6_4:79215101-79215120 | None:intergenic | 25.0% |
! | TAGCCATGTTCATATTTAAA+TGG | + | chr6_4:79215169-79215188 | None:intergenic | 25.0% |
! | CAACATCAAAGTAAATGATT+TGG | - | chr6_4:79215458-79215477 | Msa0998350:CDS | 25.0% |
! | CATAAAACATCATAGGATTA+AGG | + | chr6_4:79215549-79215568 | None:intergenic | 25.0% |
! | GAAGATACATAAAACATCAT+AGG | + | chr6_4:79215556-79215575 | None:intergenic | 25.0% |
! | TATGTATCTTCTACTGTTTA+AGG | - | chr6_4:79215565-79215584 | Msa0998350:five_prime_UTR | 25.0% |
!! | TGCAGAAAGTACAAAATAAT+AGG | + | chr6_4:79215602-79215621 | None:intergenic | 25.0% |
!!! | AAATTTGTTTTTCAGTTCTC+TGG | - | chr6_4:79215650-79215669 | Msa0998350:five_prime_UTR | 25.0% |
! | AAGAACTAGTTGATTATAGA+TGG | - | chr6_4:79215701-79215720 | Msa0998350:five_prime_UTR | 25.0% |
! | AACATTTACAACATGTTATG+TGG | + | chr6_4:79215738-79215757 | None:intergenic | 25.0% |
AAGACAATTTCCTCAACTTT+AGG | - | chr6_4:79209873-79209892 | Msa0998350:three_prime_UTR | 30.0% | |
!!! | GTTTTGTTTACCTAAAGTTG+AGG | + | chr6_4:79209886-79209905 | None:intergenic | 30.0% |
! | AACAAGTGTTGTAATGAGAA+TGG | + | chr6_4:79209921-79209940 | None:intergenic | 30.0% |
TTATGAGTTTGTGTTTGTGT+TGG | + | chr6_4:79210053-79210072 | None:intergenic | 30.0% | |
TCTAAGTCAATTATAACTGG+TGG | + | chr6_4:79210144-79210163 | None:intergenic | 30.0% | |
!!! | TGGATTCAGAGTTTTTTGAT+GGG | - | chr6_4:79210379-79210398 | Msa0998350:CDS | 30.0% |
!!! | ATAAACCTTTTAGCTCTCTT+AGG | + | chr6_4:79210567-79210586 | None:intergenic | 30.0% |
GGTTAAGAAACATTGAGTAT+TGG | - | chr6_4:79210876-79210895 | Msa0998350:intron | 30.0% | |
AGAGAGAAGATTATGTAGTT+AGG | - | chr6_4:79211030-79211049 | Msa0998350:intron | 30.0% | |
TGTCAAATTACTACAAGTAG+AGG | - | chr6_4:79211074-79211093 | Msa0998350:intron | 30.0% | |
! | TTTACCTAATTTGTGAGTCA+TGG | - | chr6_4:79211370-79211389 | Msa0998350:intron | 30.0% |
TTAACCATGACTCACAAATT+AGG | + | chr6_4:79211377-79211396 | None:intergenic | 30.0% | |
CGATTCTAAGTTTAGAAGTT+TGG | - | chr6_4:79211545-79211564 | Msa0998350:intron | 30.0% | |
! | AAGTTTAGAAGTTTGGAATC+TGG | - | chr6_4:79211552-79211571 | Msa0998350:intron | 30.0% |
GGAAGTTAATCCTATACATA+TGG | - | chr6_4:79211573-79211592 | Msa0998350:intron | 30.0% | |
TCCTATACATATGGAATTTC+TGG | - | chr6_4:79211582-79211601 | Msa0998350:intron | 30.0% | |
ACCAGAAATTCCATATGTAT+AGG | + | chr6_4:79211586-79211605 | None:intergenic | 30.0% | |
!! | CTGTAGTTGATTCTAAGATT+AGG | - | chr6_4:79211790-79211809 | Msa0998350:intron | 30.0% |
!! | GTAGTTGATTCTAAGATTAG+GGG | - | chr6_4:79211792-79211811 | Msa0998350:intron | 30.0% |
CTTCTATATATGTTGATCCT+AGG | + | chr6_4:79211852-79211871 | None:intergenic | 30.0% | |
ATGAAATGGTCTTTGGATTA+TGG | - | chr6_4:79212057-79212076 | Msa0998350:intron | 30.0% | |
AAAGGAAATAACATACCTGA+AGG | + | chr6_4:79212254-79212273 | None:intergenic | 30.0% | |
TTCAGAACAGTGAAATGAAA+AGG | + | chr6_4:79212272-79212291 | None:intergenic | 30.0% | |
TGTTTGTAACATGTTCTTGT+TGG | - | chr6_4:79212321-79212340 | Msa0998350:intron | 30.0% | |
ACATCATTGTTAAAGATGGA+GGG | + | chr6_4:79212359-79212378 | None:intergenic | 30.0% | |
TACATCATTGTTAAAGATGG+AGG | + | chr6_4:79212360-79212379 | None:intergenic | 30.0% | |
GGTTGTAACGCAAATTATAT+AGG | + | chr6_4:79212560-79212579 | None:intergenic | 30.0% | |
! | GTAATCATATGTATTGGTGT+CGG | + | chr6_4:79212642-79212661 | None:intergenic | 30.0% |
GAAAAGTTCAGATGATATGT+AGG | + | chr6_4:79212808-79212827 | None:intergenic | 30.0% | |
CTAAATCATGAAACAGAAGA+TGG | + | chr6_4:79213091-79213110 | None:intergenic | 30.0% | |
! | TCCACAAAATTTTACGTAGA+TGG | - | chr6_4:79213222-79213241 | Msa0998350:intron | 30.0% |
! | ACCATCTACGTAAAATTTTG+TGG | + | chr6_4:79213226-79213245 | None:intergenic | 30.0% |
!! | AATAGGATTGGTTGAACTTT+AGG | + | chr6_4:79213281-79213300 | None:intergenic | 30.0% |
CAATCATGCTTACGAAAAAT+TGG | - | chr6_4:79213319-79213338 | Msa0998350:intron | 30.0% | |
AATCTTATACCATATGGTGA+AGG | + | chr6_4:79213451-79213470 | None:intergenic | 30.0% | |
CCTACTTCAACGATATAAAA+TGG | + | chr6_4:79213483-79213502 | None:intergenic | 30.0% | |
! | CCATTTTATATCGTTGAAGT+AGG | - | chr6_4:79213480-79213499 | Msa0998350:intron | 30.0% |
TTTATATCGTTGAAGTAGGT+TGG | - | chr6_4:79213484-79213503 | Msa0998350:intron | 30.0% | |
!!! | GAAGTAGGTTGGTTTATTTT+TGG | - | chr6_4:79213495-79213514 | Msa0998350:intron | 30.0% |
! | TTTTTGGATCCTTAATCTTG+TGG | - | chr6_4:79213511-79213530 | Msa0998350:intron | 30.0% |
! | GTACAAATGCAAGATTTTAC+TGG | - | chr6_4:79213718-79213737 | Msa0998350:intron | 30.0% |
TCTACTAAAGTGACGATAAA+AGG | + | chr6_4:79213873-79213892 | None:intergenic | 30.0% | |
CTCTCAGTAGTAAATACTTA+AGG | + | chr6_4:79213968-79213987 | None:intergenic | 30.0% | |
GGTAAAGTTTAGGCTATTAT+AGG | - | chr6_4:79214008-79214027 | Msa0998350:intron | 30.0% | |
!!! | CCTTTTTAGTTCTCGTTTTA+AGG | + | chr6_4:79214087-79214106 | None:intergenic | 30.0% |
CCTTAAAACGAGAACTAAAA+AGG | - | chr6_4:79214084-79214103 | Msa0998350:intron | 30.0% | |
GTTACTTCTATGGAATACAT+TGG | - | chr6_4:79214144-79214163 | Msa0998350:intron | 30.0% | |
TCACTAGTCAGAAAACTAAA+AGG | + | chr6_4:79214181-79214200 | None:intergenic | 30.0% | |
!! | CATGTGATTTTTAGATGGAT+AGG | - | chr6_4:79214424-79214443 | Msa0998350:intron | 30.0% |
CAATAAAGATGTGATAAAGG+GGG | + | chr6_4:79214751-79214770 | None:intergenic | 30.0% | |
!! | AGTTGGCTTAAATACAGTTT+TGG | - | chr6_4:79214882-79214901 | Msa0998350:intron | 30.0% |
TACGTTAGATAGGGAAAAAT+CGG | + | chr6_4:79214959-79214978 | None:intergenic | 30.0% | |
TTTCCCTATCTAACGTATTT+AGG | - | chr6_4:79214962-79214981 | Msa0998350:intron | 30.0% | |
TTCCCTATCTAACGTATTTA+GGG | - | chr6_4:79214963-79214982 | Msa0998350:intron | 30.0% | |
ATCCCTAAATACGTTAGATA+GGG | + | chr6_4:79214968-79214987 | None:intergenic | 30.0% | |
!!! | GCAAAAGTGTTTTGCAAAAA+TGG | + | chr6_4:79215130-79215149 | None:intergenic | 30.0% |
! | TGTTGTATACGATCTACTTT+TGG | + | chr6_4:79215443-79215462 | None:intergenic | 30.0% |
!! | TGTACTTTCTGCAGTTTTAT+AGG | - | chr6_4:79215609-79215628 | Msa0998350:intron | 30.0% |
AACTAGTTGATTATAGATGG+TGG | - | chr6_4:79215704-79215723 | Msa0998350:five_prime_UTR | 30.0% | |
! | TTGATTATAGATGGTGGTTA+TGG | - | chr6_4:79215710-79215729 | Msa0998350:five_prime_UTR | 30.0% |
ATGAGAATGGAACTTGACTT+TGG | + | chr6_4:79209908-79209927 | None:intergenic | 35.0% | |
TTTGTGTTTGTGTTGGAACT+TGG | + | chr6_4:79210046-79210065 | None:intergenic | 35.0% | |
! | GGTTTTCTTGTGAAGTTGTT+TGG | + | chr6_4:79210120-79210139 | None:intergenic | 35.0% |
AAGTCAATTATAACTGGTGG+TGG | + | chr6_4:79210141-79210160 | None:intergenic | 35.0% | |
!!! | GTGGATTCAGAGTTTTTTGA+TGG | - | chr6_4:79210378-79210397 | Msa0998350:CDS | 35.0% |
!!! | TCAGAGTTTTTTGATGGGTT+AGG | - | chr6_4:79210384-79210403 | Msa0998350:CDS | 35.0% |
!!! | CAGAGTTTTTTGATGGGTTA+GGG | - | chr6_4:79210385-79210404 | Msa0998350:CDS | 35.0% |
!!! | TTTTTTGATGGGTTAGGGTT+TGG | - | chr6_4:79210390-79210409 | Msa0998350:CDS | 35.0% |
ACATAGGTATAGTAGTTCCA+TGG | - | chr6_4:79210452-79210471 | Msa0998350:intron | 35.0% | |
TTGATCCTAAGAGAGCTAAA+AGG | - | chr6_4:79210559-79210578 | Msa0998350:intron | 35.0% | |
TGAGATAGTAGGATAAGACT+TGG | - | chr6_4:79210809-79210828 | Msa0998350:intron | 35.0% | |
! | GTGACTTAATTTGACTCAGT+TGG | - | chr6_4:79210855-79210874 | Msa0998350:intron | 35.0% |
!! | AAGAAACATTGAGTATTGGG+TGG | - | chr6_4:79210880-79210899 | Msa0998350:intron | 35.0% |
!! | AGAAACATTGAGTATTGGGT+GGG | - | chr6_4:79210881-79210900 | Msa0998350:intron | 35.0% |
TAAAGAAACCATCGCGAATA+GGG | + | chr6_4:79210964-79210983 | None:intergenic | 35.0% | |
TTAAAGAAACCATCGCGAAT+AGG | + | chr6_4:79210965-79210984 | None:intergenic | 35.0% | |
! | TATGTGTTTATGATCGGCTT+AGG | - | chr6_4:79210993-79211012 | Msa0998350:intron | 35.0% |
! | ATGTGTTTATGATCGGCTTA+GGG | - | chr6_4:79210994-79211013 | Msa0998350:intron | 35.0% |
AGTTAGGAGAGTAAATCAGA+TGG | - | chr6_4:79211046-79211065 | Msa0998350:intron | 35.0% | |
AGTCTCTAACTGAAGTTTGT+CGG | - | chr6_4:79211308-79211327 | Msa0998350:intron | 35.0% | |
ATTTGTGAGTCATGGTTAAG+CGG | - | chr6_4:79211378-79211397 | Msa0998350:intron | 35.0% | |
AGTCTCGTACTAAAGTTTCT+TGG | - | chr6_4:79211445-79211464 | Msa0998350:intron | 35.0% | |
GTCTCGTACTAAAGTTTCTT+GGG | - | chr6_4:79211446-79211465 | Msa0998350:intron | 35.0% | |
ATCAGACACACAAACACAAT+TGG | + | chr6_4:79211894-79211913 | None:intergenic | 35.0% | |
GGATTATGGAGAATTCAGTT+TGG | - | chr6_4:79212071-79212090 | Msa0998350:intron | 35.0% | |
TTGTAACATGTTCTTGTTGG+TGG | - | chr6_4:79212324-79212343 | Msa0998350:intron | 35.0% | |
!! | ATGTTCTTGTTGGTGGTTTA+TGG | - | chr6_4:79212331-79212350 | Msa0998350:intron | 35.0% |
GCATATCCTTGGTATTATGT+GGG | + | chr6_4:79212433-79212452 | None:intergenic | 35.0% | |
TGCATATCCTTGGTATTATG+TGG | + | chr6_4:79212434-79212453 | None:intergenic | 35.0% | |
CTGTACTCATAACTTTGAAC+TGG | - | chr6_4:79212774-79212793 | Msa0998350:intron | 35.0% | |
AAACACCCCTTTGATAAAAG+AGG | + | chr6_4:79212847-79212866 | None:intergenic | 35.0% | |
TTAAGCAGTCTCAGGTTTAA+TGG | + | chr6_4:79213024-79213043 | None:intergenic | 35.0% | |
TGGAAATACAAGCACGAAAT+CGG | + | chr6_4:79213206-79213225 | None:intergenic | 35.0% | |
! | AATTTTACGTAGATGGTCCT+AGG | - | chr6_4:79213229-79213248 | Msa0998350:intron | 35.0% |
! | AAAAACCCTCCTTTTTATCC+TGG | + | chr6_4:79213255-79213274 | None:intergenic | 35.0% |
AAAGGATTGCCACAAGATTA+AGG | + | chr6_4:79213523-79213542 | None:intergenic | 35.0% | |
TATGTAACAACCAACTGTAG+TGG | - | chr6_4:79213592-79213611 | Msa0998350:intron | 35.0% | |
TGTTAGGATTTATGTTCGTC+TGG | - | chr6_4:79213683-79213702 | Msa0998350:intron | 35.0% | |
CATACTCTAAGTGTGTTTGA+GGG | - | chr6_4:79213743-79213762 | Msa0998350:intron | 35.0% | |
TCATCACAACACCACAAAAT+TGG | + | chr6_4:79213803-79213822 | None:intergenic | 35.0% | |
TTCTTTGAGTGTACTATCTC+TGG | - | chr6_4:79213838-79213857 | Msa0998350:intron | 35.0% | |
ACTAAAAAGGTGAGAAACGT+CGG | - | chr6_4:79214097-79214116 | Msa0998350:intron | 35.0% | |
TGACTAGTGACTATGTTAGA+GGG | - | chr6_4:79214191-79214210 | Msa0998350:intron | 35.0% | |
GAGTAAAGTGGTAATTATCC+AGG | - | chr6_4:79214336-79214355 | Msa0998350:intron | 35.0% | |
TCTGTAATCCAACAAACCAA+GGG | + | chr6_4:79214380-79214399 | None:intergenic | 35.0% | |
ATCTGTAATCCAACAAACCA+AGG | + | chr6_4:79214381-79214400 | None:intergenic | 35.0% | |
!! | GTGATTTTTAGATGGATAGG+TGG | - | chr6_4:79214427-79214446 | Msa0998350:intron | 35.0% |
! | AGATATTTGATGACTTGGAG+TGG | + | chr6_4:79214459-79214478 | None:intergenic | 35.0% |
TGATTTGACTGCTCAGAATA+AGG | - | chr6_4:79214625-79214644 | Msa0998350:intron | 35.0% | |
CGTAAATGATGCAAAATAGC+AGG | + | chr6_4:79214909-79214928 | None:intergenic | 35.0% | |
CATCCCTAAATACGTTAGAT+AGG | + | chr6_4:79214969-79214988 | None:intergenic | 35.0% | |
AAAGTGTGACATTGTCTAAG+TGG | + | chr6_4:79215019-79215038 | None:intergenic | 35.0% | |
!! | TTTGTTTTTCAGTTCTCTGG+TGG | - | chr6_4:79215653-79215672 | Msa0998350:five_prime_UTR | 35.0% |
! | AGAGAAGAGAGAGAGTTTTC+AGG | + | chr6_4:79209971-79209990 | None:intergenic | 40.0% |
TTTGTGTTGGAACTTGGAAG+TGG | + | chr6_4:79210040-79210059 | None:intergenic | 40.0% | |
AGGTATAGTAGTTCCATGGA+TGG | - | chr6_4:79210456-79210475 | Msa0998350:intron | 40.0% | |
GGTATAGTAGTTCCATGGAT+GGG | - | chr6_4:79210457-79210476 | Msa0998350:intron | 40.0% | |
TGGTGTGAAGAAATCTATGC+CGG | - | chr6_4:79210509-79210528 | Msa0998350:intron | 40.0% | |
!! | GAAACATTGAGTATTGGGTG+GGG | - | chr6_4:79210882-79210901 | Msa0998350:intron | 40.0% |
!! | AAACATTGAGTATTGGGTGG+GGG | - | chr6_4:79210883-79210902 | Msa0998350:intron | 40.0% |
TAGGAGAGTAAATCAGATGG+AGG | - | chr6_4:79211049-79211068 | Msa0998350:intron | 40.0% | |
AGGAGAGTAAATCAGATGGA+GGG | - | chr6_4:79211050-79211069 | Msa0998350:intron | 40.0% | |
ATGTAGTTTACCCCACTTAG+TGG | - | chr6_4:79211175-79211194 | Msa0998350:intron | 40.0% | |
TGTAGTTTACCCCACTTAGT+GGG | - | chr6_4:79211176-79211195 | Msa0998350:intron | 40.0% | |
AACTGTAATCCCACTAAGTG+GGG | + | chr6_4:79211188-79211207 | None:intergenic | 40.0% | |
CAACTGTAATCCCACTAAGT+GGG | + | chr6_4:79211189-79211208 | None:intergenic | 40.0% | |
TCAACTGTAATCCCACTAAG+TGG | + | chr6_4:79211190-79211209 | None:intergenic | 40.0% | |
GTCTCTAACTGAAGTTTGTC+GGG | - | chr6_4:79211309-79211328 | Msa0998350:intron | 40.0% | |
AAGTTTGTCGGGATATTCTG+AGG | - | chr6_4:79211320-79211339 | Msa0998350:intron | 40.0% | |
! | TTAAGCGGTGTTGAGTTTGT+GGG | - | chr6_4:79211393-79211412 | Msa0998350:intron | 40.0% |
GTCAAATACCCTACTTACGA+TGG | - | chr6_4:79211491-79211510 | Msa0998350:intron | 40.0% | |
AACTCGATATACAAGTGAGC+TGG | - | chr6_4:79212170-79212189 | Msa0998350:intron | 40.0% | |
!!! | CTGTCTGATTTTGAGTTGTG+CGG | - | chr6_4:79212389-79212408 | Msa0998350:intron | 40.0% |
TGTGCGGTCATAACTGTTTA+TGG | - | chr6_4:79212405-79212424 | Msa0998350:intron | 40.0% | |
ATGGAACCCACATAATACCA+AGG | - | chr6_4:79212424-79212443 | Msa0998350:intron | 40.0% | |
ACATGCAACATGCATATCCT+TGG | + | chr6_4:79212444-79212463 | None:intergenic | 40.0% | |
TATGCATGTTGCATGTGTGT+AGG | - | chr6_4:79212448-79212467 | Msa0998350:intron | 40.0% | |
AGTACAGTGTCCAAATGCAA+GGG | + | chr6_4:79212761-79212780 | None:intergenic | 40.0% | |
GTTTCAGATTAAGCAGTCTC+AGG | + | chr6_4:79213032-79213051 | None:intergenic | 40.0% | |
!! | CTGCAGCACATCTTTTAGTT+AGG | + | chr6_4:79213373-79213392 | None:intergenic | 40.0% |
TAAATCGAGCCTTCACCATA+TGG | - | chr6_4:79213439-79213458 | Msa0998350:CDS | 40.0% | |
GCATACTCTAAGTGTGTTTG+AGG | - | chr6_4:79213742-79213761 | Msa0998350:intron | 40.0% | |
AAGTGTGTTTGAGGGAATCT+TGG | - | chr6_4:79213751-79213770 | Msa0998350:intron | 40.0% | |
CTGACTAGTGACTATGTTAG+AGG | - | chr6_4:79214190-79214209 | Msa0998350:intron | 40.0% | |
AGGGCTTTCTTCCATAATAC+TGG | - | chr6_4:79214210-79214229 | Msa0998350:intron | 40.0% | |
GGGCTTTCTTCCATAATACT+GGG | - | chr6_4:79214211-79214230 | Msa0998350:intron | 40.0% | |
TCCATAATACTGGGAGAGAT+TGG | - | chr6_4:79214220-79214239 | Msa0998350:intron | 40.0% | |
CTGTAATCCAACAAACCAAG+GGG | + | chr6_4:79214379-79214398 | None:intergenic | 40.0% | |
! | TTTGATGACTTGGAGTGGTT+GGG | + | chr6_4:79214454-79214473 | None:intergenic | 40.0% |
! | ATTTGATGACTTGGAGTGGT+TGG | + | chr6_4:79214455-79214474 | None:intergenic | 40.0% |
ATTCTGAGCAGTCAAATCAG+TGG | + | chr6_4:79214624-79214643 | None:intergenic | 40.0% | |
CAACAAGCAAAGCTTAGAGA+AGG | - | chr6_4:79214677-79214696 | Msa0998350:intron | 40.0% | |
AGAAAGAACTTCAACGCCTT+AGG | - | chr6_4:79215223-79215242 | Msa0998350:CDS | 40.0% | |
GAAAGAACTTCAACGCCTTA+GGG | - | chr6_4:79215224-79215243 | Msa0998350:CDS | 40.0% | |
! | AATGATTCTTTTGCGCCCTA+AGG | + | chr6_4:79215242-79215261 | None:intergenic | 40.0% |
TAGGGCGCAAAAGAATCATT+TGG | - | chr6_4:79215242-79215261 | Msa0998350:CDS | 40.0% | |
AAATGAAGGATTACCGGCAA+CGG | + | chr6_4:79215271-79215290 | None:intergenic | 40.0% | |
GCCGGTAATCCTTCATTTAA+CGG | - | chr6_4:79215273-79215292 | Msa0998350:CDS | 40.0% | |
CCCGTTAAATGAAGGATTAC+CGG | + | chr6_4:79215277-79215296 | None:intergenic | 40.0% | |
CCGGTAATCCTTCATTTAAC+GGG | - | chr6_4:79215274-79215293 | Msa0998350:CDS | 40.0% | |
GAGAACATCCCGTTAAATGA+AGG | + | chr6_4:79215285-79215304 | None:intergenic | 40.0% | |
AGGATTACTCATCTGTTGCA+TGG | + | chr6_4:79215328-79215347 | None:intergenic | 40.0% | |
!! | GAAGAGAGAGAGTTTTCAGG+TGG | + | chr6_4:79209968-79209987 | None:intergenic | 45.0% |
AAAACATGCCACCATCACGT+GGG | - | chr6_4:79210163-79210182 | Msa0998350:exon | 45.0% | |
TTGGAGATATCGAAGTCGGA+CGG | + | chr6_4:79210264-79210283 | None:intergenic | 45.0% | |
GAGGTTGGAGATATCGAAGT+CGG | + | chr6_4:79210268-79210287 | None:intergenic | 45.0% | |
ATGGACTCATCAGAGTCCAT+CGG | + | chr6_4:79210315-79210334 | None:intergenic | 45.0% | |
ATGGACTCTGATGAGTCCAT+CGG | - | chr6_4:79210315-79210334 | Msa0998350:CDS | 45.0% | |
!! | TTTGATGGGTTAGGGTTTGG+TGG | - | chr6_4:79210393-79210412 | Msa0998350:intron | 45.0% |
AAGGGGAAAAGGTTGAAGAG+AGG | - | chr6_4:79210418-79210437 | Msa0998350:intron | 45.0% | |
GGAAAAGGTTGAAGAGAGGA+AGG | - | chr6_4:79210422-79210441 | Msa0998350:intron | 45.0% | |
AGAGGAAGGTGAGTAGACAT+AGG | - | chr6_4:79210436-79210455 | Msa0998350:intron | 45.0% | |
! | GAGATGGGGTTGTTTGAAGT+TGG | - | chr6_4:79210483-79210502 | Msa0998350:intron | 45.0% |
!! | GGGTTGTTTGAAGTTGGTGA+TGG | - | chr6_4:79210489-79210508 | Msa0998350:intron | 45.0% |
AGTTCAGCAAGTTTCTCAGC+CGG | + | chr6_4:79210531-79210550 | None:intergenic | 45.0% | |
ACTATCTCACGTCAGCTACA+TGG | + | chr6_4:79210798-79210817 | None:intergenic | 45.0% | |
TGTAGCTGACGTGAGATAGT+AGG | - | chr6_4:79210798-79210817 | Msa0998350:intron | 45.0% | |
!! | AACATTGAGTATTGGGTGGG+GGG | - | chr6_4:79210884-79210903 | Msa0998350:intron | 45.0% |
! | TATGATCGGCTTAGGGAGTT+TGG | - | chr6_4:79211001-79211020 | Msa0998350:intron | 45.0% |
! | ATGATCGGCTTAGGGAGTTT+GGG | - | chr6_4:79211002-79211021 | Msa0998350:intron | 45.0% |
TGTAGCCAATCTCTGTGACT+CGG | - | chr6_4:79211222-79211241 | Msa0998350:intron | 45.0% | |
GTTAAGCGACACTCAGTTTG+TGG | - | chr6_4:79211248-79211267 | Msa0998350:intron | 45.0% | |
! | GTTAAGCGGTGTTGAGTTTG+TGG | - | chr6_4:79211392-79211411 | Msa0998350:intron | 45.0% |
GGATACTATGACGAGCATCT+GGG | - | chr6_4:79211467-79211486 | Msa0998350:intron | 45.0% | |
GATATACAAGTGAGCTGGAG+AGG | - | chr6_4:79212175-79212194 | Msa0998350:intron | 45.0% | |
TGCACAACTTACAGTCCTTC+AGG | - | chr6_4:79212236-79212255 | Msa0998350:intron | 45.0% | |
GTTGCATGTGTGTAGGTACT+AGG | - | chr6_4:79212455-79212474 | Msa0998350:intron | 45.0% | |
CATGTGTGTAGGTACTAGGT+AGG | - | chr6_4:79212459-79212478 | Msa0998350:intron | 45.0% | |
GCGTTACAACCTATGAAGCA+CGG | - | chr6_4:79212569-79212588 | Msa0998350:intron | 45.0% | |
AACGACACATGTTCGACAAC+AGG | + | chr6_4:79212617-79212636 | None:intergenic | 45.0% | |
AACCTATGAAGCACAGACAC+AGG | + | chr6_4:79212727-79212746 | None:intergenic | 45.0% | |
GAGTACAGTGTCCAAATGCA+AGG | + | chr6_4:79212762-79212781 | None:intergenic | 45.0% | |
CTAGGCCAGGATAAAAAGGA+GGG | - | chr6_4:79213247-79213266 | Msa0998350:intron | 45.0% | |
TCTTGTGGCAATCCTTTCCA+AGG | - | chr6_4:79213526-79213545 | Msa0998350:intron | 45.0% | |
! | CATGTTTCTGCACCTTGGAA+AGG | + | chr6_4:79213541-79213560 | None:intergenic | 45.0% |
! | GGTGTTGTGATGAGTGAAGA+TGG | - | chr6_4:79213810-79213829 | Msa0998350:intron | 45.0% |
GTGTACTATCTCTGGTGATC+TGG | - | chr6_4:79213846-79213865 | Msa0998350:intron | 45.0% | |
GCCAATCTCTCCCAGTATTA+TGG | + | chr6_4:79214224-79214243 | None:intergenic | 45.0% | |
TGAAATTAACAGCGTGCGAG+AGG | + | chr6_4:79214524-79214543 | None:intergenic | 45.0% | |
! | AAGCTTTGCTTGTTGCTCGA+AGG | + | chr6_4:79214672-79214691 | None:intergenic | 45.0% |
! | AAGGGTTGATCAGAACGAGA+AGG | + | chr6_4:79215381-79215400 | None:intergenic | 45.0% |
CGTTCTGATCAACCCTTCAA+CGG | - | chr6_4:79215384-79215403 | Msa0998350:CDS | 45.0% | |
!!! | AGAGAGAGTTTTCAGGTGGC+TGG | + | chr6_4:79209964-79209983 | None:intergenic | 50.0% |
TTGGAACTTGGAAGTGGTGG+TGG | + | chr6_4:79210034-79210053 | None:intergenic | 50.0% | |
GTGTTGGAACTTGGAAGTGG+TGG | + | chr6_4:79210037-79210056 | None:intergenic | 50.0% | |
GAAAACATGCCACCATCACG+TGG | - | chr6_4:79210162-79210181 | Msa0998350:exon | 50.0% | |
TGGAGATATCGAAGTCGGAC+GGG | + | chr6_4:79210263-79210282 | None:intergenic | 50.0% | |
TGGACTCATCAGAGTCCATC+GGG | + | chr6_4:79210314-79210333 | None:intergenic | 50.0% | |
TGGACTCTGATGAGTCCATC+GGG | - | chr6_4:79210316-79210335 | Msa0998350:CDS | 50.0% | |
GCATCTCAGGAGTTTGTCTG+TGG | - | chr6_4:79210359-79210378 | Msa0998350:CDS | 50.0% | |
!! | GGTTAGGGTTTGGTGGTGAA+GGG | - | chr6_4:79210400-79210419 | Msa0998350:intron | 50.0% |
!! | GTTAGGGTTTGGTGGTGAAG+GGG | - | chr6_4:79210401-79210420 | Msa0998350:intron | 50.0% |
!! | GTTTGGTGGTGAAGGGGAAA+AGG | - | chr6_4:79210407-79210426 | Msa0998350:intron | 50.0% |
TTCCATGGATGGGTCTGAGA+TGG | - | chr6_4:79210467-79210486 | Msa0998350:intron | 50.0% | |
! | TCCATGGATGGGTCTGAGAT+GGG | - | chr6_4:79210468-79210487 | Msa0998350:intron | 50.0% |
ACCATCGCGAATAGGGTCTT+TGG | + | chr6_4:79210957-79210976 | None:intergenic | 50.0% | |
ACCAACCGAGTCACAGAGAT+TGG | + | chr6_4:79211230-79211249 | None:intergenic | 50.0% | |
AAGCGACACTCAGTTTGTGG+TGG | - | chr6_4:79211251-79211270 | Msa0998350:intron | 50.0% | |
AGCGACACTCAGTTTGTGGT+GGG | - | chr6_4:79211252-79211271 | Msa0998350:intron | 50.0% | |
TTGAGTTTGTGGGAGGACTG+AGG | - | chr6_4:79211403-79211422 | Msa0998350:intron | 50.0% | |
GGGATACTATGACGAGCATC+TGG | - | chr6_4:79211466-79211485 | Msa0998350:intron | 50.0% | |
GGACTGTAAGTTGTGCAGAG+AGG | + | chr6_4:79212233-79212252 | None:intergenic | 50.0% | |
GTCCTGTGTCTGTGCTTCAT+AGG | - | chr6_4:79212722-79212741 | Msa0998350:intron | 50.0% | |
CTACACGCTTCCCTTGCATT+TGG | - | chr6_4:79212748-79212767 | Msa0998350:intron | 50.0% | |
GGTCCTAGGCCAGGATAAAA+AGG | - | chr6_4:79213243-79213262 | Msa0998350:intron | 50.0% | |
! | CCTCCTTTTTATCCTGGCCT+AGG | + | chr6_4:79213249-79213268 | None:intergenic | 50.0% |
CCTAGGCCAGGATAAAAAGG+AGG | - | chr6_4:79213246-79213265 | Msa0998350:intron | 50.0% | |
! | GCACTCATGTTTCTGCACCT+TGG | + | chr6_4:79213546-79213565 | None:intergenic | 50.0% |
ATCCAGGCATTCAACCCACA+TGG | - | chr6_4:79214352-79214371 | Msa0998350:intron | 50.0% | |
ACAAACCAAGGGGACCATGT+GGG | + | chr6_4:79214369-79214388 | None:intergenic | 50.0% | |
AACAAACCAAGGGGACCATG+TGG | + | chr6_4:79214370-79214389 | None:intergenic | 50.0% | |
!! | ACATGGTCCCCTTGGTTTGT+TGG | - | chr6_4:79214369-79214388 | Msa0998350:intron | 50.0% |
AATCATTTGGCTGCCGTTGC+CGG | - | chr6_4:79215255-79215274 | Msa0998350:CDS | 50.0% | |
GGTTGATCAGAACGAGAAGG+CGG | + | chr6_4:79215378-79215397 | None:intergenic | 50.0% | |
TCGTGGTCGCTCTAACTTCA+TGG | - | chr6_4:79215407-79215426 | Msa0998350:CDS | 50.0% | |
!! | AGTGGTGGTGGTGGTTGAAG+TGG | + | chr6_4:79210022-79210041 | None:intergenic | 55.0% |
!! | GAACTTGGAAGTGGTGGTGG+TGG | + | chr6_4:79210031-79210050 | None:intergenic | 55.0% |
AGGTGGTGTCTGAGTGGGAA+CGG | + | chr6_4:79210200-79210219 | None:intergenic | 55.0% | |
ACGGAAGGTGGTGTCTGAGT+GGG | + | chr6_4:79210205-79210224 | None:intergenic | 55.0% | |
AACGGAAGGTGGTGTCTGAG+TGG | + | chr6_4:79210206-79210225 | None:intergenic | 55.0% | |
AGACACCACCTTCCGTTTCG+CGG | - | chr6_4:79210209-79210228 | Msa0998350:CDS | 55.0% | |
GAAGTTTGCCGCGAAACGGA+AGG | + | chr6_4:79210220-79210239 | None:intergenic | 55.0% | |
CGTCGAAGTTTGCCGCGAAA+CGG | + | chr6_4:79210224-79210243 | None:intergenic | 55.0% | |
ATCGGGAAGTCAGCGTCAGA+GGG | - | chr6_4:79210333-79210352 | Msa0998350:CDS | 55.0% | |
!! | GGGTTAGGGTTTGGTGGTGA+AGG | - | chr6_4:79210399-79210418 | Msa0998350:intron | 55.0% |
! | CCATGGATGGGTCTGAGATG+GGG | - | chr6_4:79210469-79210488 | Msa0998350:intron | 55.0% |
!! | ATTGAGTATTGGGTGGGGGG+AGG | - | chr6_4:79210887-79210906 | Msa0998350:intron | 55.0% |
!! | TTGAGTATTGGGTGGGGGGA+GGG | - | chr6_4:79210888-79210907 | Msa0998350:intron | 55.0% |
!! | GGTTTGTTGGGGGTGCTCTA+AGG | - | chr6_4:79210919-79210938 | Msa0998350:CDS | 55.0% |
GCCAAAGACCCTATTCGCGA+TGG | - | chr6_4:79210953-79210972 | Msa0998350:CDS | 55.0% | |
!! | GCCAATCTCTGTGACTCGGT+TGG | - | chr6_4:79211226-79211245 | Msa0998350:intron | 55.0% |
GCGACACTCAGTTTGTGGTG+GGG | - | chr6_4:79211253-79211272 | Msa0998350:intron | 55.0% | |
CGACACTCAGTTTGTGGTGG+GGG | - | chr6_4:79211254-79211273 | Msa0998350:intron | 55.0% | |
! | AGCGGTGTTGAGTTTGTGGG+AGG | - | chr6_4:79211396-79211415 | Msa0998350:intron | 55.0% |
CTGCTGCACGATCGAAAGAG+AGG | - | chr6_4:79212145-79212164 | Msa0998350:intron | 55.0% | |
!! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr6_4:79212581-79212600 | None:intergenic | 55.0% |
ATGAAGCACGGACACTCCTC+AGG | - | chr6_4:79212581-79212600 | Msa0998350:intron | 55.0% | |
AACAGGACACGCCTAACCTG+AGG | + | chr6_4:79212600-79212619 | None:intergenic | 55.0% | |
TACGTAGATGGTCCTAGGCC+AGG | - | chr6_4:79213234-79213253 | Msa0998350:intron | 55.0% | |
CCAGTAGCGTCCACTACAGT+TGG | + | chr6_4:79213605-79213624 | None:intergenic | 55.0% | |
!! | CCAACTGTAGTGGACGCTAC+TGG | - | chr6_4:79213602-79213621 | Msa0998350:intron | 55.0% |
! | GACCATGTGGGTTGAATGCC+TGG | + | chr6_4:79214357-79214376 | None:intergenic | 55.0% |
TTCAACCCACATGGTCCCCT+TGG | - | chr6_4:79214361-79214380 | Msa0998350:intron | 55.0% | |
ATGCCAGGTTGTGTCTGCTG+GGG | + | chr6_4:79215354-79215373 | None:intergenic | 55.0% | |
CATGCCAGGTTGTGTCTGCT+GGG | + | chr6_4:79215355-79215374 | None:intergenic | 55.0% | |
GATCAACCCTTCAACGGTCG+TGG | - | chr6_4:79215390-79215409 | Msa0998350:CDS | 55.0% | |
TGGTGTCTGAGTGGGAACGG+CGG | + | chr6_4:79210197-79210216 | None:intergenic | 60.0% | |
GTTTGCCGCGAAACGGAAGG+TGG | + | chr6_4:79210217-79210236 | None:intergenic | 60.0% | |
ATCGAAGTCGGACGGGTCGA+AGG | + | chr6_4:79210256-79210275 | None:intergenic | 60.0% | |
AGTCCATCGGGACAGCGTCA+GGG | + | chr6_4:79210302-79210321 | None:intergenic | 60.0% | |
!! | CTCTGACGCTGACTTCCCGA+TGG | + | chr6_4:79210334-79210353 | None:intergenic | 60.0% |
CATCGGGAAGTCAGCGTCAG+AGG | - | chr6_4:79210332-79210351 | Msa0998350:CDS | 60.0% | |
GGAAGTCAGCGTCAGAGGGA+CGG | - | chr6_4:79210337-79210356 | Msa0998350:CDS | 60.0% | |
CCCCATCTCAGACCCATCCA+TGG | + | chr6_4:79210472-79210491 | None:intergenic | 60.0% | |
!! | TGAGTATTGGGTGGGGGGAG+GGG | - | chr6_4:79210889-79210908 | Msa0998350:intron | 60.0% |
!! | AGGGGGCGCTGAGGTTTGTT+GGG | - | chr6_4:79210907-79210926 | Msa0998350:intron | 60.0% |
! | CACTCAGTTTGTGGTGGGGG+AGG | - | chr6_4:79211257-79211276 | Msa0998350:intron | 60.0% |
! | TTTGTGGTGGGGGAGGACTG+AGG | - | chr6_4:79211264-79211283 | Msa0998350:intron | 60.0% |
GCACGGACACTCCTCAGGTT+AGG | - | chr6_4:79212586-79212605 | Msa0998350:intron | 60.0% | |
GGTTGTGTCTGCTGGGGTTG+AGG | + | chr6_4:79215348-79215367 | None:intergenic | 60.0% | |
CAACCCCAGCAGACACAACC+TGG | - | chr6_4:79215348-79215367 | Msa0998350:CDS | 60.0% | |
GCATGCCAGGTTGTGTCTGC+TGG | + | chr6_4:79215356-79215375 | None:intergenic | 60.0% | |
GAGCGACCACGACCGTTGAA+GGG | + | chr6_4:79215399-79215418 | None:intergenic | 60.0% | |
AGAGCGACCACGACCGTTGA+AGG | + | chr6_4:79215400-79215419 | None:intergenic | 60.0% | |
! | TGGTGGGTCCCACGTGATGG+TGG | + | chr6_4:79210174-79210193 | None:intergenic | 65.0% |
TGAGTGGGAACGGCGGTGGT+GGG | + | chr6_4:79210190-79210209 | None:intergenic | 65.0% | |
TGTCTGAGTGGGAACGGCGG+TGG | + | chr6_4:79210194-79210213 | None:intergenic | 65.0% | |
ATCGGGACAGCGTCAGGGGA+CGG | + | chr6_4:79210297-79210316 | None:intergenic | 65.0% | |
GTCCATCGGGACAGCGTCAG+GGG | + | chr6_4:79210301-79210320 | None:intergenic | 65.0% | |
GAGTCCATCGGGACAGCGTC+AGG | + | chr6_4:79210303-79210322 | None:intergenic | 65.0% | |
CGTCAGAGGGACGGCATCTC+AGG | - | chr6_4:79210346-79210365 | Msa0998350:CDS | 65.0% | |
!! | GAGTATTGGGTGGGGGGAGG+GGG | - | chr6_4:79210890-79210909 | Msa0998350:intron | 65.0% |
!! | GAGGGGGCGCTGAGGTTTGT+TGG | - | chr6_4:79210906-79210925 | Msa0998350:intron | 65.0% |
!! | GGGGGCGCTGAGGTTTGTTG+GGG | - | chr6_4:79210908-79210927 | Msa0998350:intron | 65.0% |
!! | GGGGCGCTGAGGTTTGTTGG+GGG | - | chr6_4:79210909-79210928 | Msa0998350:intron | 65.0% |
!! | GGGGTGCTCTAAGGCGTGTC+TGG | - | chr6_4:79210928-79210947 | Msa0998350:CDS | 65.0% |
GAACGAGAAGGCGGCATGCC+AGG | + | chr6_4:79215369-79215388 | None:intergenic | 65.0% | |
!! | CGGTGGTGGGTCCCACGTGA+TGG | + | chr6_4:79210177-79210196 | None:intergenic | 70.0% |
CTGAGTGGGAACGGCGGTGG+TGG | + | chr6_4:79210191-79210210 | None:intergenic | 70.0% | |
AGGGGACGGGAGAGGGAGGT+TGG | + | chr6_4:79210283-79210302 | None:intergenic | 70.0% | |
CAGCGTCAGGGGACGGGAGA+GGG | + | chr6_4:79210290-79210309 | None:intergenic | 70.0% | |
ACAGCGTCAGGGGACGGGAG+AGG | + | chr6_4:79210291-79210310 | None:intergenic | 70.0% | |
TCGGGACAGCGTCAGGGGAC+GGG | + | chr6_4:79210296-79210315 | None:intergenic | 70.0% | |
GTCCCCTGACGCTGTCCCGA+TGG | - | chr6_4:79210296-79210315 | Msa0998350:CDS | 70.0% | |
CGTCAGGGGACGGGAGAGGG+AGG | + | chr6_4:79210287-79210306 | None:intergenic | 75.0% | |
!!! | GGTGGGGGGAGGGGGCGCTG+AGG | - | chr6_4:79210898-79210917 | Msa0998350:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 79209848 | 79215768 | 79209848 | ID=Msa0998350;Name=Msa0998350 |
chr6_4 | mRNA | 79209848 | 79215768 | 79209848 | ID=Msa0998350-mRNA-1;Parent=Msa0998350;Name=Msa0998350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=242|1|1|1|0.75|0.6|5|319|310 |
chr6_4 | exon | 79209848 | 79210411 | 79209848 | ID=Msa0998350-mRNA-1:exon:14952;Parent=Msa0998350-mRNA-1 |
chr6_4 | exon | 79210918 | 79211002 | 79210918 | ID=Msa0998350-mRNA-1:exon:14951;Parent=Msa0998350-mRNA-1 |
chr6_4 | exon | 79213359 | 79213491 | 79213359 | ID=Msa0998350-mRNA-1:exon:14950;Parent=Msa0998350-mRNA-1 |
chr6_4 | exon | 79215036 | 79215619 | 79215036 | ID=Msa0998350-mRNA-1:exon:14949;Parent=Msa0998350-mRNA-1 |
chr6_4 | exon | 79215641 | 79215768 | 79215641 | ID=Msa0998350-mRNA-1:exon:14948;Parent=Msa0998350-mRNA-1 |
chr6_4 | five_prime_UTR | 79215641 | 79215768 | 79215641 | ID=Msa0998350-mRNA-1:five_prime_utr;Parent=Msa0998350-mRNA-1 |
chr6_4 | five_prime_UTR | 79215506 | 79215619 | 79215506 | ID=Msa0998350-mRNA-1:five_prime_utr;Parent=Msa0998350-mRNA-1 |
chr6_4 | CDS | 79215036 | 79215505 | 79215036 | ID=Msa0998350-mRNA-1:cds;Parent=Msa0998350-mRNA-1 |
chr6_4 | CDS | 79213359 | 79213491 | 79213359 | ID=Msa0998350-mRNA-1:cds;Parent=Msa0998350-mRNA-1 |
chr6_4 | CDS | 79210918 | 79211002 | 79210918 | ID=Msa0998350-mRNA-1:cds;Parent=Msa0998350-mRNA-1 |
chr6_4 | CDS | 79210167 | 79210411 | 79210167 | ID=Msa0998350-mRNA-1:cds;Parent=Msa0998350-mRNA-1 |
chr6_4 | three_prime_UTR | 79209848 | 79210166 | 79209848 | ID=Msa0998350-mRNA-1:three_prime_utr;Parent=Msa0998350-mRNA-1 |
Gene Sequence |
Protein sequence |