Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999650 | XP_003620600.2 | 93.810 | 630 | 15 | 2 | 1 | 630 | 1 | 606 | 0.0 | 1206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999650 | sp|Q9SZD1|TCX5_ARATH | 55.955 | 529 | 184 | 15 | 43 | 537 | 21 | 534 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999650 | A0A0C3VZM0 | 93.810 | 630 | 15 | 2 | 1 | 630 | 1 | 606 | 0.0 | 1206 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0999650 | TF | CPP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999650 | MtrunA17_Chr6g0485811 | 93.810 | 630 | 15 | 2 | 1 | 630 | 1 | 606 | 0.0 | 1206 |
| Msa0999650 | MtrunA17_Chr8g0390351 | 65.789 | 646 | 155 | 12 | 1 | 631 | 1 | 595 | 0.0 | 790 |
| Msa0999650 | MtrunA17_Chr3g0139951 | 48.000 | 350 | 157 | 11 | 51 | 385 | 61 | 400 | 8.40e-86 | 274 |
| Msa0999650 | MtrunA17_Chr5g0394661 | 41.463 | 164 | 93 | 2 | 96 | 258 | 456 | 617 | 3.56e-30 | 126 |
| Msa0999650 | MtrunA17_Chr1g0149101 | 47.727 | 132 | 60 | 3 | 130 | 255 | 498 | 626 | 4.58e-29 | 123 |
| Msa0999650 | MtrunA17_Chr1g0205031 | 38.211 | 123 | 67 | 3 | 141 | 258 | 416 | 534 | 1.60e-15 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999650 | AT4G29000.1 | 55.955 | 529 | 184 | 15 | 43 | 537 | 21 | 534 | 0.0 | 531 |
| Msa0999650 | AT2G20110.3 | 51.779 | 506 | 192 | 13 | 45 | 537 | 21 | 487 | 8.06e-165 | 483 |
| Msa0999650 | AT2G20110.1 | 51.779 | 506 | 192 | 13 | 45 | 537 | 21 | 487 | 1.31e-164 | 483 |
| Msa0999650 | AT2G20110.2 | 51.072 | 513 | 192 | 14 | 45 | 537 | 21 | 494 | 9.53e-162 | 476 |
| Msa0999650 | AT5G25790.1 | 42.152 | 446 | 199 | 12 | 90 | 524 | 51 | 448 | 4.20e-103 | 321 |
| Msa0999650 | AT5G25790.2 | 42.152 | 446 | 199 | 12 | 90 | 524 | 51 | 448 | 9.38e-103 | 322 |
| Msa0999650 | AT5G25790.3 | 41.928 | 446 | 196 | 13 | 90 | 524 | 51 | 444 | 1.90e-100 | 314 |
| Msa0999650 | AT3G16160.1 | 31.175 | 417 | 179 | 13 | 113 | 518 | 43 | 362 | 6.74e-43 | 159 |
| Msa0999650 | AT3G22760.2 | 42.289 | 201 | 83 | 7 | 93 | 266 | 147 | 341 | 5.65e-36 | 142 |
| Msa0999650 | AT3G22760.1 | 42.289 | 201 | 83 | 7 | 93 | 266 | 270 | 464 | 9.30e-36 | 143 |
| Msa0999650 | AT3G22780.1 | 34.016 | 244 | 135 | 6 | 52 | 274 | 312 | 550 | 1.29e-33 | 137 |
| Msa0999650 | AT4G14770.1 | 35.556 | 225 | 120 | 6 | 52 | 259 | 289 | 505 | 1.52e-33 | 137 |
| Msa0999650 | AT4G14770.3 | 35.556 | 225 | 120 | 6 | 52 | 259 | 270 | 486 | 1.56e-33 | 136 |
| Msa0999650 | AT4G14770.2 | 35.556 | 225 | 120 | 6 | 52 | 259 | 269 | 485 | 1.88e-33 | 136 |
| Msa0999650 | AT3G04850.1 | 46.512 | 129 | 68 | 1 | 130 | 257 | 453 | 581 | 2.71e-30 | 126 |
Find 176 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGGGCTGCTCGCAATTT+TGG | 0.046264 | 6_4:-81921345 | None:intergenic |
| TTCTCTTACATCACCAATTT+TGG | 0.102587 | 6_4:+81918796 | Msa0999650:five_prime_UTR |
| TTGCACTGCCTTTGCTTCTT+TGG | 0.171967 | 6_4:-81920521 | None:intergenic |
| TCCGGATGAACAACATTCTT+TGG | 0.229319 | 6_4:-81919084 | None:intergenic |
| AAAATTGTTGGATCCAAAAT+TGG | 0.252570 | 6_4:-81918809 | None:intergenic |
| ATTGATACTGTAGCTGAAAA+TGG | 0.265617 | 6_4:+81924849 | Msa0999650:CDS |
| CCTTCTTTCATTTCAAAGTT+AGG | 0.287560 | 6_4:-81920494 | None:intergenic |
| GCGGCAAATGCTGCCATAAC+TGG | 0.288463 | 6_4:+81922173 | Msa0999650:CDS |
| CAAGCTGCAAAGACGCTTGC+AGG | 0.309609 | 6_4:+81922986 | Msa0999650:CDS |
| GAATTTGAAATTGTGAGTTT+TGG | 0.323848 | 6_4:+81919007 | Msa0999650:five_prime_UTR |
| GAAGGAGCTTTGTTCAGTTC+TGG | 0.330355 | 6_4:+81922949 | Msa0999650:CDS |
| TCAGTTCTGGTACTAGTATC+TGG | 0.333159 | 6_4:+81922962 | Msa0999650:CDS |
| TCTCAATAGAGTTATTACTA+TGG | 0.333741 | 6_4:+81923763 | Msa0999650:CDS |
| GCAACAGCAGGTGGTTCAAC+AGG | 0.346703 | 6_4:+81919245 | Msa0999650:CDS |
| TGCGGCTGCAACGGCGGCTG+CGG | 0.348875 | 6_4:+81919125 | Msa0999650:CDS |
| TTAGGTCTTGATCTTGGTTT+GGG | 0.348976 | 6_4:-81920476 | None:intergenic |
| GATCCAATCAACAATGAAAC+TGG | 0.349953 | 6_4:+81924624 | Msa0999650:CDS |
| AGAGAGAGAAAGTGAGAGAA+AGG | 0.353781 | 6_4:-81918744 | None:intergenic |
| TTTCCAGTTTCATTGTTGAT+TGG | 0.364933 | 6_4:-81924627 | None:intergenic |
| AAGTGAATTAGAGAATAAAA+AGG | 0.370167 | 6_4:+81924602 | Msa0999650:CDS |
| GTTAGGTCTTGATCTTGGTT+TGG | 0.377110 | 6_4:-81920477 | None:intergenic |
| AACACTCTTCTGTGAGGGTT+GGG | 0.378551 | 6_4:+81919349 | Msa0999650:CDS |
| AGAGACAAAGTGTTCTTCAT+TGG | 0.385382 | 6_4:+81924575 | Msa0999650:intron |
| ATTACTATGGGAGAGATAAA+TGG | 0.386685 | 6_4:+81923776 | Msa0999650:CDS |
| GCTGCCATAACTGGAGCTAT+TGG | 0.394392 | 6_4:+81922182 | Msa0999650:CDS |
| CTCAGGGAGCACGCGATAGC+AGG | 0.397812 | 6_4:+81921363 | Msa0999650:CDS |
| GTCGTAACCGTAACAAATTC+CGG | 0.402486 | 6_4:-81919102 | None:intergenic |
| GAACTGAACAAAGCTCCTTC+AGG | 0.409238 | 6_4:-81922946 | None:intergenic |
| CAAAATTGCGAGCAGCCCTC+AGG | 0.414226 | 6_4:+81921346 | Msa0999650:CDS |
| GTGGAATTTGAACAATTTGA+AGG | 0.421018 | 6_4:+81918985 | Msa0999650:five_prime_UTR |
| CCGAAAAGACCGATGTCTCC+TGG | 0.421935 | 6_4:+81923569 | Msa0999650:CDS |
| AAATTGCGAAGATGTATTGC+AGG | 0.422987 | 6_4:-81923669 | None:intergenic |
| AGCATTCACAGTACTTCTTA+AGG | 0.425540 | 6_4:-81922028 | None:intergenic |
| CTCAATAGAGTTATTACTAT+GGG | 0.427779 | 6_4:+81923764 | Msa0999650:CDS |
| TCAAAGTTAGGTCTTGATCT+TGG | 0.427800 | 6_4:-81920482 | None:intergenic |
| CTGCAAGCGTCTTTGCAGCT+TGG | 0.434786 | 6_4:-81922985 | None:intergenic |
| TGTCCCGGCTTGCTAATTGA+TGG | 0.441456 | 6_4:-81922284 | None:intergenic |
| CGTGGTACAAATCCAACATT+AGG | 0.442565 | 6_4:+81922791 | Msa0999650:CDS |
| TCCAAAGAATGTTGTTCATC+CGG | 0.443750 | 6_4:+81919083 | Msa0999650:CDS |
| GTCCATCAAAATTAAAGTAC+AGG | 0.444356 | 6_4:+81922819 | Msa0999650:CDS |
| GAGAGAGAAAGTGAGAGAAA+GGG | 0.448529 | 6_4:-81918743 | None:intergenic |
| AATTAGCAAGCCGGGACAAC+AGG | 0.448943 | 6_4:+81922289 | Msa0999650:CDS |
| GAGTGTGACGGTGCAGAAAC+CGG | 0.453981 | 6_4:+81919269 | Msa0999650:CDS |
| GTCTGCACCGGCGTTGGCAC+CGG | 0.455906 | 6_4:-81919321 | None:intergenic |
| TCTGTCACTCCTTGTCCGTC+AGG | 0.456188 | 6_4:-81923692 | None:intergenic |
| GCATGGGTCGTTTGCCCGAT+GGG | 0.456405 | 6_4:-81923647 | None:intergenic |
| GGCAAACCACCCACTCCAAC+CGG | 0.458936 | 6_4:-81919288 | None:intergenic |
| TGAGGGAAGTGAAGAGAGAC+AGG | 0.459062 | 6_4:+81922106 | Msa0999650:CDS |
| CTTGCTAATTGATGGATCCT+TGG | 0.460693 | 6_4:-81922276 | None:intergenic |
| GAGAGACAGGCTTTGTTTCG+TGG | 0.462723 | 6_4:+81922119 | Msa0999650:CDS |
| GAGAAAGGGTTTGAAGAAGA+AGG | 0.463633 | 6_4:-81918729 | None:intergenic |
| TGACAGCTGCCTCTCCCATC+GGG | 0.464632 | 6_4:+81923633 | Msa0999650:CDS |
| CAAAGCTGCATTTCCACCTA+TGG | 0.469835 | 6_4:+81924701 | Msa0999650:CDS |
| TTTCAGCTACAGTATCAATA+GGG | 0.473556 | 6_4:-81924845 | None:intergenic |
| ATCAAAGAAAAGAAAAGGTC+AGG | 0.474100 | 6_4:+81922232 | Msa0999650:CDS |
| CATGGACTGCAAGAACTTTG+AGG | 0.474484 | 6_4:+81922088 | Msa0999650:CDS |
| GTTGGCACCGGTACCGGTAT+CGG | 0.477193 | 6_4:-81919309 | None:intergenic |
| CAACACTCTTCTGTGAGGGT+TGG | 0.479410 | 6_4:+81919348 | Msa0999650:CDS |
| ACCGGCGTTGGCACCGGTAC+CGG | 0.479675 | 6_4:-81919315 | None:intergenic |
| AACACCTGCAGTTCCACCTA+TGG | 0.480803 | 6_4:+81924800 | Msa0999650:CDS |
| CAATAAATGTAGGAGGAGGC+TGG | 0.481773 | 6_4:+81921948 | Msa0999650:intron |
| AGCGTAATCCAAATGCATTT+AGG | 0.482400 | 6_4:+81921321 | Msa0999650:CDS |
| AACACCTGCAGTTCCACCTA+TGG | 0.482822 | 6_4:+81924734 | Msa0999650:CDS |
| ATGACAGCTGCCTCTCCCAT+CGG | 0.486923 | 6_4:+81923632 | Msa0999650:CDS |
| TGTTCATCCGGAATTTGTTA+CGG | 0.488179 | 6_4:+81919095 | Msa0999650:CDS |
| CCATCTGAACATGAATTACC+AGG | 0.490481 | 6_4:-81923536 | None:intergenic |
| ATCTTGTTCGTCACACATCA+AGG | 0.491361 | 6_4:-81923600 | None:intergenic |
| AGTGGGTGGTTTGCCGATAC+CGG | 0.492641 | 6_4:+81919296 | Msa0999650:CDS |
| CAGAACAAAGAACGTTGGCT+TGG | 0.493572 | 6_4:-81922052 | None:intergenic |
| TACTGAGATAGTACATCAGC+AGG | 0.501027 | 6_4:+81924656 | Msa0999650:CDS |
| AAGGTCAGGAACTCTTCTTA+TGG | 0.502814 | 6_4:+81922246 | Msa0999650:CDS |
| TGGAGAATCCAAGCTGAAGA+TGG | 0.503658 | 6_4:+81924869 | Msa0999650:CDS |
| GTACCACGGGCACTTGAGAC+AGG | 0.504024 | 6_4:-81922776 | None:intergenic |
| GGTCGTTTGCCCGATGGGAG+AGG | 0.505246 | 6_4:-81923642 | None:intergenic |
| ATGGACTGCAAGAACTTTGA+GGG | 0.505326 | 6_4:+81922089 | Msa0999650:CDS |
| ATGTAGGAGGAGGCTGGGGA+AGG | 0.505481 | 6_4:+81921954 | Msa0999650:intron |
| TGCGACTGCGACGGCGTGGT+TGG | 0.505644 | 6_4:+81919155 | Msa0999650:CDS |
| TACGACTGCGGCTGCAACGG+CGG | 0.507622 | 6_4:+81919119 | Msa0999650:CDS |
| GGATGAACAACATTCTTTGG+AGG | 0.510272 | 6_4:-81919081 | None:intergenic |
| TTCTGAGAATTGTAGATGCA+TGG | 0.511900 | 6_4:+81922070 | Msa0999650:CDS |
| GGTGTTGAAGTTGCGGCCAT+AGG | 0.512968 | 6_4:-81924816 | None:intergenic |
| TGGTTTGCCGATACCGGTAC+CGG | 0.513091 | 6_4:+81919302 | Msa0999650:CDS |
| CGAAAAGACCGATGTCTCCT+GGG | 0.513429 | 6_4:+81923570 | Msa0999650:CDS |
| CTGATGTACTATCTCAGTAC+TGG | 0.516199 | 6_4:-81924652 | None:intergenic |
| TGTTGAACCACCTGCTGTTG+CGG | 0.517452 | 6_4:-81919243 | None:intergenic |
| GAAGCTGATGAGGAGGGTGC+TGG | 0.517647 | 6_4:-81922752 | None:intergenic |
| GGAAGAATCGTAATCGGTGG+TGG | 0.518893 | 6_4:+81918966 | Msa0999650:five_prime_UTR |
| GATGGACTCTGACCTAATGT+TGG | 0.519331 | 6_4:-81922803 | None:intergenic |
| CACATCAAGGCTAAAGTCCC+AGG | 0.519918 | 6_4:-81923587 | None:intergenic |
| CCCGCATCAAAGAAAAGAAA+AGG | 0.524525 | 6_4:+81922227 | Msa0999650:CDS |
| GCAGTCGAAACCGCAACAGC+AGG | 0.525250 | 6_4:+81919233 | Msa0999650:CDS |
| TTTGAGGGAAGAATCGTAAT+CGG | 0.527607 | 6_4:+81918960 | Msa0999650:five_prime_UTR |
| ACTGGAGCTATTGGTTCCTA+CGG | 0.529339 | 6_4:+81922191 | Msa0999650:CDS |
| GCGAAGATGTATTGCAGGCA+TGG | 0.531295 | 6_4:-81923664 | None:intergenic |
| GGTGTTGAAGTTGTGGCCAT+AGG | 0.532141 | 6_4:-81924750 | None:intergenic |
| CAGAAACCGGTTGGAGTGGG+TGG | 0.532614 | 6_4:+81919282 | Msa0999650:CDS |
| AATAAATGTAGGAGGAGGCT+GGG | 0.532720 | 6_4:+81921949 | Msa0999650:intron |
| GGTTACGACTGCGGCTGCAA+CGG | 0.534767 | 6_4:+81919116 | Msa0999650:CDS |
| GGTGTTGAAGTTGCGGCCAT+AGG | 0.535923 | 6_4:-81924717 | None:intergenic |
| ATTTGTTACGGTTACGACTG+CGG | 0.540360 | 6_4:+81919107 | Msa0999650:CDS |
| GGAACCAATAGCTCCAGTTA+TGG | 0.541771 | 6_4:-81922186 | None:intergenic |
| AAAATTGCGAGCAGCCCTCA+GGG | 0.542064 | 6_4:+81921347 | Msa0999650:CDS |
| GCTCTTGAGTTGATGAAGCA+AGG | 0.542763 | 6_4:-81923430 | None:intergenic |
| GAGTGTTGAATTGTCTGCAC+CGG | 0.543822 | 6_4:-81919333 | None:intergenic |
| CTCTTGAGTTGATGAAGCAA+GGG | 0.545085 | 6_4:-81923429 | None:intergenic |
| CCTAACTTTGAAATGAAAGA+AGG | 0.546661 | 6_4:+81920494 | Msa0999650:CDS |
| AAGGTACTCCAAAGAAGCAA+AGG | 0.548812 | 6_4:+81920513 | Msa0999650:CDS |
| GGATCCATCAATTAGCAAGC+CGG | 0.552604 | 6_4:+81922280 | Msa0999650:CDS |
| GATCCATCAATTAGCAAGCC+GGG | 0.555761 | 6_4:+81922281 | Msa0999650:CDS |
| CAACAGCAGGTGGTTCAACA+GGG | 0.557867 | 6_4:+81919246 | Msa0999650:CDS |
| GGCTGCAAATGCGACTGCGA+CGG | 0.559897 | 6_4:+81919146 | Msa0999650:CDS |
| ACCGGTACCGGTGCCAACGC+CGG | 0.561379 | 6_4:+81919314 | Msa0999650:CDS |
| TGAGACAGGTGAAGCTGATG+AGG | 0.562009 | 6_4:-81922762 | None:intergenic |
| CTTCTTATGGCCTACAGCCA+AGG | 0.564439 | 6_4:+81922259 | Msa0999650:CDS |
| GGTTTGAAGAAGAAGGAAGA+AGG | 0.565910 | 6_4:-81918722 | None:intergenic |
| CTGCTATCGCGTGCTCCCTG+AGG | 0.567725 | 6_4:-81921362 | None:intergenic |
| GTTGAAGTTGCGGCCATAGG+TGG | 0.568296 | 6_4:-81924714 | None:intergenic |
| GTTGAAGTTGCGGCCATAGG+TGG | 0.568296 | 6_4:-81924813 | None:intergenic |
| GACCACAGGTGTTGAAGTTG+CGG | 0.569006 | 6_4:-81924823 | None:intergenic |
| CGAAGATGTATTGCAGGCAT+GGG | 0.569090 | 6_4:-81923663 | None:intergenic |
| AAAAGAAGTTGACGTTGAGA+AGG | 0.569097 | 6_4:+81923466 | Msa0999650:CDS |
| GAGAGAGAGAAAGTGTGTGA+AGG | 0.569275 | 6_4:-81918772 | None:intergenic |
| TTTGACATCACCATTGCTAG+TGG | 0.569409 | 6_4:-81924682 | None:intergenic |
| GTGCAGAAACCGGTTGGAGT+GGG | 0.569804 | 6_4:+81919279 | Msa0999650:CDS |
| TCGCAATTTCCTGACGGACA+AGG | 0.572247 | 6_4:+81923683 | Msa0999650:CDS |
| AACTGCAGGTGTTGAAGTTG+TGG | 0.572999 | 6_4:-81924757 | None:intergenic |
| GTTGAAGTTGTGGCAATATG+TGG | 0.573718 | 6_4:-81924780 | None:intergenic |
| CAGCAGGAAGCCACTAGCAA+TGG | 0.574156 | 6_4:+81924672 | Msa0999650:CDS |
| GCGGCCATAGGTGGAACTGC+AGG | 0.576630 | 6_4:-81924804 | None:intergenic |
| TTAATGGCGGAAGGTGAAGG+AGG | 0.577062 | 6_4:+81919051 | Msa0999650:exon |
| TCAGGGAGCACGCGATAGCA+GGG | 0.577678 | 6_4:+81921364 | Msa0999650:CDS |
| GCGTCGGGAATATATTGTGA+TGG | 0.580424 | 6_4:+81921224 | Msa0999650:CDS |
| CCTGGTAATTCATGTTCAGA+TGG | 0.580857 | 6_4:+81923536 | Msa0999650:CDS |
| TAATGTTGGATTTGTACCAC+GGG | 0.582378 | 6_4:-81922789 | None:intergenic |
| AGTTGACGTTGAGAAGGCTA+TGG | 0.583343 | 6_4:+81923472 | Msa0999650:CDS |
| GGTGCAGAAACCGGTTGGAG+TGG | 0.585730 | 6_4:+81919278 | Msa0999650:CDS |
| AATATTAATAAAACATCACA+AGG | 0.586663 | 6_4:+81921980 | Msa0999650:CDS |
| CAAAGCTCCTTCAGGTGATG+TGG | 0.590881 | 6_4:-81922938 | None:intergenic |
| CAAACAGATAAAATCAGCCC+TGG | 0.591581 | 6_4:+81923518 | Msa0999650:CDS |
| TGAATTGTCTGCACCGGCGT+TGG | 0.592942 | 6_4:-81919327 | None:intergenic |
| AACTGCAGGTGTTGAAGTTG+TGG | 0.593897 | 6_4:-81924790 | None:intergenic |
| AATTCAACACTCTTCTGTGA+GGG | 0.594410 | 6_4:+81919344 | Msa0999650:CDS |
| AACTGCAGGTGTTGAAGTTG+CGG | 0.594681 | 6_4:-81924724 | None:intergenic |
| ATTGATGGATCCTTGGCTGT+AGG | 0.596299 | 6_4:-81922269 | None:intergenic |
| GTGGCCATAGGTGGAACTGC+AGG | 0.599317 | 6_4:-81924738 | None:intergenic |
| ATAAATGTAGGAGGAGGCTG+GGG | 0.600017 | 6_4:+81921950 | Msa0999650:intron |
| GTTGAAGTTGTGGCCATAGG+TGG | 0.604086 | 6_4:-81924747 | None:intergenic |
| CAATGTGTATCTTCAGCAAG+CGG | 0.607593 | 6_4:+81922154 | Msa0999650:CDS |
| GTCGAAACCGCAACAGCAGG+TGG | 0.610823 | 6_4:+81919236 | Msa0999650:CDS |
| ACAGTATCAATAGGGACCAC+AGG | 0.611364 | 6_4:-81924837 | None:intergenic |
| CTAATGTTGGATTTGTACCA+CGG | 0.612675 | 6_4:-81922790 | None:intergenic |
| GTGACGGTGCAGAAACCGGT+TGG | 0.612676 | 6_4:+81919273 | Msa0999650:CDS |
| GCTAAAGTCCCAGGAGACAT+CGG | 0.613977 | 6_4:-81923578 | None:intergenic |
| GTGGCAATATGTGGAACTGC+AGG | 0.618160 | 6_4:-81924771 | None:intergenic |
| TGCCTCGCTAGCTTCTTCGA+CGG | 0.628871 | 6_4:-81919183 | None:intergenic |
| ACATCTTCGCAATTTCCTGA+CGG | 0.629950 | 6_4:+81923677 | Msa0999650:CDS |
| ATTCTCAGAACAAAGAACGT+TGG | 0.631850 | 6_4:-81922057 | None:intergenic |
| TATTAATAAAACATCACAAG+GGG | 0.635016 | 6_4:+81921982 | Msa0999650:CDS |
| GACAGGTGAAGCTGATGAGG+AGG | 0.635684 | 6_4:-81922759 | None:intergenic |
| TCACCTGTCTCAAGTGCCCG+TGG | 0.636461 | 6_4:+81922773 | Msa0999650:CDS |
| TGTCAGGTGAACCTTGTCAA+AGG | 0.639915 | 6_4:+81922728 | Msa0999650:intron |
| AGGGTGCTGGACCTTTGACA+AGG | 0.645508 | 6_4:-81922739 | None:intergenic |
| TACCGTCGAAGAAGCTAGCG+AGG | 0.646483 | 6_4:+81919181 | Msa0999650:CDS |
| GGCCGCAACTTCAACACCTG+TGG | 0.647452 | 6_4:+81924821 | Msa0999650:CDS |
| GGTTCAACAGGGGAGTGTGA+CGG | 0.651746 | 6_4:+81919257 | Msa0999650:CDS |
| AACAGCAGGTGGTTCAACAG+GGG | 0.653532 | 6_4:+81919247 | Msa0999650:CDS |
| TGTACAGCCACATCACCTGA+AGG | 0.656229 | 6_4:+81922931 | Msa0999650:CDS |
| CAAATGCGACTGCGACGGCG+TGG | 0.660370 | 6_4:+81919151 | Msa0999650:CDS |
| CAATTCAACACTCTTCTGTG+AGG | 0.662812 | 6_4:+81919343 | Msa0999650:CDS |
| CAATGAAGCTGCTAGACGAG+AGG | 0.668933 | 6_4:+81921280 | Msa0999650:CDS |
| GAGGGAAGAATCGTAATCGG+TGG | 0.677249 | 6_4:+81918963 | Msa0999650:five_prime_UTR |
| ATATTAATAAAACATCACAA+GGG | 0.678177 | 6_4:+81921981 | Msa0999650:CDS |
| GGGAGGTGATGAAAAGCCGT+AGG | 0.682334 | 6_4:-81922207 | None:intergenic |
| CATCTGAACATGAATTACCA+GGG | 0.687920 | 6_4:-81923535 | None:intergenic |
| TGACGGACAAGGAGTGACAG+AGG | 0.696697 | 6_4:+81923694 | Msa0999650:CDS |
| ACAGGTGAAGCTGATGAGGA+GGG | 0.698375 | 6_4:-81922758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAGGAAATATATTTTT+TGG | + | chr6_4:81921072-81921091 | Msa0999650:intron | 10.0% |
| !!! | AATTATTTTTATGTCTTTAA+AGG | + | chr6_4:81923038-81923057 | Msa0999650:intron | 10.0% |
| !!! | AAAAAGTTTTTGAAAATTGT+TGG | - | chr6_4:81918824-81918843 | None:intergenic | 15.0% |
| !!! | TTTAATTGTATACACATTTT+AGG | + | chr6_4:81919944-81919963 | Msa0999650:intron | 15.0% |
| !!! | TTTTATATGATAGAACATTA+TGG | + | chr6_4:81921561-81921580 | Msa0999650:intron | 15.0% |
| !! | TCTAAAAAGTTATAGAAAAA+AGG | + | chr6_4:81921831-81921850 | Msa0999650:intron | 15.0% |
| !! | AATATTAATAAAACATCACA+AGG | + | chr6_4:81921980-81921999 | Msa0999650:CDS | 15.0% |
| !! | ATATTAATAAAACATCACAA+GGG | + | chr6_4:81921981-81922000 | Msa0999650:CDS | 15.0% |
| !!! | ATTTTTTTTTAATATGTGTC+AGG | + | chr6_4:81922712-81922731 | Msa0999650:intron | 15.0% |
| !!! | ACATAAAAATAATTGATGAT+TGG | - | chr6_4:81923032-81923051 | None:intergenic | 15.0% |
| !! | AATTATGATAAAGTTTCATA+CGG | - | chr6_4:81923229-81923248 | None:intergenic | 15.0% |
| !! | ATTAAATTAAAAATAAGGAG+AGG | - | chr6_4:81923811-81923830 | None:intergenic | 15.0% |
| !!! | TATATGTTTTTCAAAACTTA+GGG | - | chr6_4:81923924-81923943 | None:intergenic | 15.0% |
| !!! | TTATATGTTTTTCAAAACTT+AGG | - | chr6_4:81923925-81923944 | None:intergenic | 15.0% |
| !!! | TTACGAAGAATTTCAATTTT+TGG | - | chr6_4:81918860-81918879 | None:intergenic | 20.0% |
| !!! | TGAATTTTTTGAGAAATTTG+AGG | + | chr6_4:81918944-81918963 | Msa0999650:five_prime_UTR | 20.0% |
| !!! | GAATTTTTTGAGAAATTTGA+GGG | + | chr6_4:81918945-81918964 | Msa0999650:five_prime_UTR | 20.0% |
| !!! | AAATTGTTGTGTTGTTTTAA+TGG | + | chr6_4:81919035-81919054 | Msa0999650:exon | 20.0% |
| !!! | TGTGTTTTTGAATTTTTGAA+AGG | + | chr6_4:81919427-81919446 | Msa0999650:intron | 20.0% |
| !!! | GTGTTTTTGAATTTTTGAAA+GGG | + | chr6_4:81919428-81919447 | Msa0999650:intron | 20.0% |
| !! | TTAGTTAGAATCAATTATAG+AGG | + | chr6_4:81919756-81919775 | Msa0999650:intron | 20.0% |
| !! | TTGTTTCCTGAAAAATTAAA+GGG | - | chr6_4:81920450-81920469 | None:intergenic | 20.0% |
| !! | TTTGTTTATATAGTATGCAT+AGG | + | chr6_4:81920974-81920993 | Msa0999650:intron | 20.0% |
| !! | TTGGAATCAAAATAACTTAT+AGG | - | chr6_4:81921468-81921487 | None:intergenic | 20.0% |
| !!! | ACTTTTTAGATCATATAAAG+AGG | - | chr6_4:81921821-81921840 | None:intergenic | 20.0% |
| !! | TATTAATAAAACATCACAAG+GGG | + | chr6_4:81921982-81922001 | Msa0999650:CDS | 20.0% |
| !! | GTTTATTTAAACTTAGGTAT+TGG | + | chr6_4:81922349-81922368 | Msa0999650:intron | 20.0% |
| !! | AAGAATATCAGAAAACATAA+CGG | - | chr6_4:81923065-81923084 | None:intergenic | 20.0% |
| !! | AAACAAAAATTGATGAGAAA+AGG | - | chr6_4:81923349-81923368 | None:intergenic | 20.0% |
| !!! | ATATGTTTTTCAAAACTTAG+GGG | - | chr6_4:81923923-81923942 | None:intergenic | 20.0% |
| !!! | ATTGAAAATTTTCATGCATT+GGG | - | chr6_4:81923984-81924003 | None:intergenic | 20.0% |
| !!! | AATTGAAAATTTTCATGCAT+TGG | - | chr6_4:81923985-81924004 | None:intergenic | 20.0% |
| !!! | AGCAATTTTTAACAATATAG+TGG | - | chr6_4:81924536-81924555 | None:intergenic | 20.0% |
| !! | AAGTGAATTAGAGAATAAAA+AGG | + | chr6_4:81924602-81924621 | Msa0999650:CDS | 20.0% |
| ! | AAAATTGTTGGATCCAAAAT+TGG | - | chr6_4:81918812-81918831 | None:intergenic | 25.0% |
| !!! | GAATTTGAAATTGTGAGTTT+TGG | + | chr6_4:81919007-81919026 | Msa0999650:five_prime_UTR | 25.0% |
| !!! | TTTTTGAAAGGGTTTTTGTT+TGG | + | chr6_4:81919439-81919458 | Msa0999650:intron | 25.0% |
| ! | ATTCGTTTAAAAATCGTGTT+TGG | + | chr6_4:81919710-81919729 | Msa0999650:intron | 25.0% |
| !!! | CAAAACTTTGGTTTCAATTT+TGG | - | chr6_4:81919838-81919857 | None:intergenic | 25.0% |
| ! | ACAACATACAATCAAAACTT+TGG | - | chr6_4:81919850-81919869 | None:intergenic | 25.0% |
| !!! | GTTTTAGTATTTGAGAATGT+AGG | + | chr6_4:81919920-81919939 | Msa0999650:intron | 25.0% |
| !!! | TGTATACACATTTTAGGTAA+CGG | + | chr6_4:81919950-81919969 | Msa0999650:intron | 25.0% |
| ! | CACTCATATATTAGAAGTTA+TGG | + | chr6_4:81920093-81920112 | Msa0999650:intron | 25.0% |
| ! | ATGTTAGTGTTATGAAATAG+CGG | - | chr6_4:81920315-81920334 | None:intergenic | 25.0% |
| !!! | TAACTACCCTTTAATTTTTC+AGG | + | chr6_4:81920441-81920460 | Msa0999650:intron | 25.0% |
| ! | CTTGTTTCCTGAAAAATTAA+AGG | - | chr6_4:81920451-81920470 | None:intergenic | 25.0% |
| !! | TATATAGTAAAGCATCTAAC+TGG | + | chr6_4:81920819-81920838 | Msa0999650:intron | 25.0% |
| ! | TTAGCTGAACTATCATAAAA+AGG | + | chr6_4:81921057-81921076 | Msa0999650:intron | 25.0% |
| ! | ACAATTGTGTATGATTAGAT+TGG | + | chr6_4:81921428-81921447 | Msa0999650:intron | 25.0% |
| !! | AAAACACATTCAAGACATTT+TGG | - | chr6_4:81921487-81921506 | None:intergenic | 25.0% |
| !!! | TGTCTTGAATGTGTTTTTAT+TGG | + | chr6_4:81921490-81921509 | Msa0999650:intron | 25.0% |
| !!! | TGTTGTTGTTTAGAAACTTA+AGG | + | chr6_4:81921633-81921652 | Msa0999650:intron | 25.0% |
| !!! | GTTGTTGTTTAGAAACTTAA+GGG | + | chr6_4:81921634-81921653 | Msa0999650:intron | 25.0% |
| !!! | GTTTAATTTTCTGAATTGAC+TGG | + | chr6_4:81921763-81921782 | Msa0999650:intron | 25.0% |
| ! | AGTTATAGAAAAAAGGTTTC+TGG | + | chr6_4:81921838-81921857 | Msa0999650:intron | 25.0% |
| !!! | ATTTCAATTTTTTTGCTGAC+TGG | + | chr6_4:81921917-81921936 | Msa0999650:intron | 25.0% |
| !!! | GGTATTTTGACAATAAATGT+AGG | + | chr6_4:81921938-81921957 | Msa0999650:intron | 25.0% |
| !!! | ATTTTGACAATAAATGTAGG+AGG | + | chr6_4:81921941-81921960 | Msa0999650:intron | 25.0% |
| ! | TACAGGGTTTATTTAAACTT+AGG | + | chr6_4:81922343-81922362 | Msa0999650:intron | 25.0% |
| !!! | AACTTAGGTATTGGTTAAAT+CGG | + | chr6_4:81922358-81922377 | Msa0999650:intron | 25.0% |
| ! | ATCGGAGAAATATTAAACAA+CGG | + | chr6_4:81922376-81922395 | Msa0999650:intron | 25.0% |
| !!! | CTTTCTAGTTTTAAATCCTA+AGG | + | chr6_4:81922530-81922549 | Msa0999650:intron | 25.0% |
| !!! | TTAATTTGTCTCTATACCTT+AGG | - | chr6_4:81922549-81922568 | None:intergenic | 25.0% |
| !!! | TACCTGTACTTTAATTTTGA+TGG | - | chr6_4:81922824-81922843 | None:intergenic | 25.0% |
| ! | AATTAAAGTACAGGTAATGT+TGG | + | chr6_4:81922828-81922847 | Msa0999650:intron | 25.0% |
| ! | TGGTTATATGTATGAAATGA+AGG | + | chr6_4:81922848-81922867 | Msa0999650:intron | 25.0% |
| !!! | GCTTACTTGATTATTTTTGT+AGG | + | chr6_4:81922891-81922910 | Msa0999650:intron | 25.0% |
| ! | AGAATATCAGAAAACATAAC+GGG | - | chr6_4:81923064-81923083 | None:intergenic | 25.0% |
| ! | TCTCAATAGAGTTATTACTA+TGG | + | chr6_4:81923763-81923782 | Msa0999650:CDS | 25.0% |
| ! | CTCAATAGAGTTATTACTAT+GGG | + | chr6_4:81923764-81923783 | Msa0999650:CDS | 25.0% |
| !! | TCATATCGTCATTGTAATTT+TGG | + | chr6_4:81923861-81923880 | Msa0999650:intron | 25.0% |
| ! | TTGCCAAAATGAAAAATTGA+CGG | - | chr6_4:81923895-81923914 | None:intergenic | 25.0% |
| !!! | TATGTTTTTCAAAACTTAGG+GGG | - | chr6_4:81923922-81923941 | None:intergenic | 25.0% |
| !! | TTGAAAATTTTCATGCATTG+GGG | - | chr6_4:81923983-81924002 | None:intergenic | 25.0% |
| !! | TGAGGCTTTGTAATTATTAA+GGG | + | chr6_4:81924093-81924112 | Msa0999650:intron | 25.0% |
| ! | AAAAGTAACTTCTGACTAAA+AGG | - | chr6_4:81924206-81924225 | None:intergenic | 25.0% |
| ! | TTCTCTTACATCACCAATTT+TGG | + | chr6_4:81918796-81918815 | Msa0999650:five_prime_UTR | 30.0% |
| GTGGAATTTGAACAATTTGA+AGG | + | chr6_4:81918985-81919004 | Msa0999650:five_prime_UTR | 30.0% | |
| !!! | TTGTTGTGTTGTTTTAATGG+CGG | + | chr6_4:81919038-81919057 | Msa0999650:exon | 30.0% |
| !! | TGATTTTAATGCGATGTTGA+TGG | + | chr6_4:81919209-81919228 | Msa0999650:CDS | 30.0% |
| TTACCTAAATTCACTAAGTG+CGG | - | chr6_4:81919994-81920013 | None:intergenic | 30.0% | |
| CACTTAGTGAATTTAGGTAA+CGG | + | chr6_4:81919994-81920013 | Msa0999650:intron | 30.0% | |
| CCTTCTTTCATTTCAAAGTT+AGG | - | chr6_4:81920497-81920516 | None:intergenic | 30.0% | |
| !! | CCTAACTTTGAAATGAAAGA+AGG | + | chr6_4:81920494-81920513 | Msa0999650:CDS | 30.0% |
| TATACACTAGTACAGAATTG+TGG | - | chr6_4:81920744-81920763 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTATCTCTCCTT+TGG | + | chr6_4:81921112-81921131 | Msa0999650:intron | 30.0% |
| ! | ATATTGTGAATGTTTTGCGT+CGG | + | chr6_4:81921208-81921227 | Msa0999650:CDS | 30.0% |
| !! | GTGTATGATTAGATTGGTTT+AGG | + | chr6_4:81921434-81921453 | Msa0999650:intron | 30.0% |
| TTCATTAAGTGTCTGATACA+CGG | - | chr6_4:81921877-81921896 | None:intergenic | 30.0% | |
| ! | ACCTTTTCTTTTCTTTGATG+CGG | - | chr6_4:81922231-81922250 | None:intergenic | 30.0% |
| ATCAAAGAAAAGAAAAGGTC+AGG | + | chr6_4:81922232-81922251 | Msa0999650:CDS | 30.0% | |
| GTCCATCAAAATTAAAGTAC+AGG | + | chr6_4:81922819-81922838 | Msa0999650:CDS | 30.0% | |
| !! | TCTTTTGTTGTATGAATGAC+TGG | + | chr6_4:81923081-81923100 | Msa0999650:intron | 30.0% |
| TGAATGTGTGTGCAATATAA+TGG | + | chr6_4:81923187-81923206 | Msa0999650:intron | 30.0% | |
| ! | TCATACGGTGAAGTTTTTAT+TGG | - | chr6_4:81923214-81923233 | None:intergenic | 30.0% |
| !! | ACAATCAATGGTTCTGAAAA+AGG | - | chr6_4:81923322-81923341 | None:intergenic | 30.0% |
| AGAAAAGGAAACACAATCAA+TGG | - | chr6_4:81923334-81923353 | None:intergenic | 30.0% | |
| ATTACTATGGGAGAGATAAA+TGG | + | chr6_4:81923776-81923795 | Msa0999650:CDS | 30.0% | |
| ! | AGACCGTCAATTTTTCATTT+TGG | + | chr6_4:81923889-81923908 | Msa0999650:intron | 30.0% |
| AACACTTGTAGAGTAATCAT+TGG | - | chr6_4:81924024-81924043 | None:intergenic | 30.0% | |
| ! | CTGAGGCTTTGTAATTATTA+AGG | + | chr6_4:81924092-81924111 | Msa0999650:intron | 30.0% |
| ! | GAGGCTTTGTAATTATTAAG+GGG | + | chr6_4:81924094-81924113 | Msa0999650:intron | 30.0% |
| ! | AGGCTTTGTAATTATTAAGG+GGG | + | chr6_4:81924095-81924114 | Msa0999650:intron | 30.0% |
| TTCAATAAGCTGAAAGTTGA+AGG | + | chr6_4:81924130-81924149 | Msa0999650:intron | 30.0% | |
| TCAATAAGCTGAAAGTTGAA+GGG | + | chr6_4:81924131-81924150 | Msa0999650:intron | 30.0% | |
| CAATGCCATTAGAAAGAATT+CGG | + | chr6_4:81924280-81924299 | Msa0999650:intron | 30.0% | |
| ! | GAACGATTTAGATTCAAGTT+CGG | - | chr6_4:81924419-81924438 | None:intergenic | 30.0% |
| GGCTATTGAGAAAATATGAA+GGG | - | chr6_4:81924515-81924534 | None:intergenic | 30.0% | |
| TGGCTATTGAGAAAATATGA+AGG | - | chr6_4:81924516-81924535 | None:intergenic | 30.0% | |
| !! | AACACTTTGTCTCTGAAATT+GGG | - | chr6_4:81924569-81924588 | None:intergenic | 30.0% |
| TTTCCAGTTTCATTGTTGAT+TGG | - | chr6_4:81924630-81924649 | None:intergenic | 30.0% | |
| TTTCAGCTACAGTATCAATA+GGG | - | chr6_4:81924848-81924867 | None:intergenic | 30.0% | |
| ! | TTTTCAGCTACAGTATCAAT+AGG | - | chr6_4:81924849-81924868 | None:intergenic | 30.0% |
| ATTGATACTGTAGCTGAAAA+TGG | + | chr6_4:81924849-81924868 | Msa0999650:CDS | 30.0% | |
| TTTGAGGGAAGAATCGTAAT+CGG | + | chr6_4:81918960-81918979 | Msa0999650:five_prime_UTR | 35.0% | |
| TCCAAAGAATGTTGTTCATC+CGG | + | chr6_4:81919083-81919102 | Msa0999650:CDS | 35.0% | |
| !! | TGTTCATCCGGAATTTGTTA+CGG | + | chr6_4:81919095-81919114 | Msa0999650:CDS | 35.0% |
| AATTCAACACTCTTCTGTGA+GGG | + | chr6_4:81919344-81919363 | Msa0999650:CDS | 35.0% | |
| ! | GTTAAAAGTGAGTTGAACTG+AGG | + | chr6_4:81919668-81919687 | Msa0999650:intron | 35.0% |
| AGGCAAAAGCAATTCTACAT+GGG | + | chr6_4:81919776-81919795 | Msa0999650:intron | 35.0% | |
| ! | TGGTTTCAATTTTGGATGAG+AGG | - | chr6_4:81919830-81919849 | None:intergenic | 35.0% |
| TCTTCACGAGGATTATATGT+TGG | + | chr6_4:81919882-81919901 | Msa0999650:intron | 35.0% | |
| !!! | TTTAGGTAACGGATTTTCAG+CGG | + | chr6_4:81919961-81919980 | Msa0999650:intron | 35.0% |
| TAACCGCACTTAGTGAATTT+AGG | + | chr6_4:81919988-81920007 | Msa0999650:intron | 35.0% | |
| CAGTGAATTATACCATGACT+GGG | - | chr6_4:81920140-81920159 | None:intergenic | 35.0% | |
| ACAGTGAATTATACCATGAC+TGG | - | chr6_4:81920141-81920160 | None:intergenic | 35.0% | |
| TAATTCACTGTTTGCAATCG+CGG | + | chr6_4:81920150-81920169 | Msa0999650:intron | 35.0% | |
| ! | TTTGACAAGCAACTGTCTTT+TGG | + | chr6_4:81920410-81920429 | Msa0999650:intron | 35.0% |
| TTAGGTCTTGATCTTGGTTT+GGG | - | chr6_4:81920479-81920498 | None:intergenic | 35.0% | |
| TCAAAGTTAGGTCTTGATCT+TGG | - | chr6_4:81920485-81920504 | None:intergenic | 35.0% | |
| CATTGAAAGAAACACACACA+CGG | - | chr6_4:81920600-81920619 | None:intergenic | 35.0% | |
| TTTGTACTTCAAAGGACAAC+AGG | - | chr6_4:81920769-81920788 | None:intergenic | 35.0% | |
| !! | CGTGTTGATTTGTACTTCAA+AGG | - | chr6_4:81920777-81920796 | None:intergenic | 35.0% |
| CAAACGATCAATCAGTTGAT+AGG | - | chr6_4:81920947-81920966 | None:intergenic | 35.0% | |
| ACTTCTACTGTGTATAGTCA+TGG | + | chr6_4:81921005-81921024 | Msa0999650:intron | 35.0% | |
| CTTCTACTGTGTATAGTCAT+GGG | + | chr6_4:81921006-81921025 | Msa0999650:intron | 35.0% | |
| GCTAAATTTGAGCCTAACTT+TGG | - | chr6_4:81921042-81921061 | None:intergenic | 35.0% | |
| CATTTGTCATAGCACCTTAT+TGG | + | chr6_4:81921142-81921161 | Msa0999650:intron | 35.0% | |
| ATGAAGTGTAACAGCCAATA+AGG | - | chr6_4:81921159-81921178 | None:intergenic | 35.0% | |
| ! | TATTGTGAATGTTTTGCGTC+GGG | + | chr6_4:81921209-81921228 | Msa0999650:CDS | 35.0% |
| AGCGTAATCCAAATGCATTT+AGG | + | chr6_4:81921321-81921340 | Msa0999650:CDS | 35.0% | |
| ! | ATTTTGGGCCTAAATGCATT+TGG | - | chr6_4:81921332-81921351 | None:intergenic | 35.0% |
| ! | TAAGTAGGTCTAGCATTTTG+TGG | + | chr6_4:81921387-81921406 | Msa0999650:intron | 35.0% |
| TATTGGAGCATATAGCGTTT+AGG | + | chr6_4:81921507-81921526 | Msa0999650:intron | 35.0% | |
| ATTGGAGCATATAGCGTTTA+GGG | + | chr6_4:81921508-81921527 | Msa0999650:intron | 35.0% | |
| CTTATTCAACTGAGTGATGT+CGG | - | chr6_4:81921606-81921625 | None:intergenic | 35.0% | |
| TTGTTAGATACGAACGTGAA+TGG | - | chr6_4:81921710-81921729 | None:intergenic | 35.0% | |
| ! | AGAAAAAAGGTTTCTGGACT+TGG | + | chr6_4:81921844-81921863 | Msa0999650:intron | 35.0% |
| TTGACAATAAATGTAGGAGG+AGG | + | chr6_4:81921944-81921963 | Msa0999650:intron | 35.0% | |
| AGCATTCACAGTACTTCTTA+AGG | - | chr6_4:81922031-81922050 | None:intergenic | 35.0% | |
| ATTCTCAGAACAAAGAACGT+TGG | - | chr6_4:81922060-81922079 | None:intergenic | 35.0% | |
| ! | TTCTGAGAATTGTAGATGCA+TGG | + | chr6_4:81922070-81922089 | Msa0999650:CDS | 35.0% |
| ! | CCTTTTCTTTTCTTTGATGC+GGG | - | chr6_4:81922230-81922249 | None:intergenic | 35.0% |
| !! | TATTTGCTATCTGCAGACTA+TGG | + | chr6_4:81922627-81922646 | Msa0999650:intron | 35.0% |
| TAATGTTGGATTTGTACCAC+GGG | - | chr6_4:81922792-81922811 | None:intergenic | 35.0% | |
| CTAATGTTGGATTTGTACCA+CGG | - | chr6_4:81922793-81922812 | None:intergenic | 35.0% | |
| ! | CATTTCCTGTTTTCGTAATC+AGG | + | chr6_4:81923149-81923168 | Msa0999650:intron | 35.0% |
| ATCAGACCAGAAAAAAACAG+TGG | + | chr6_4:81923376-81923395 | Msa0999650:intron | 35.0% | |
| !!! | GCTTTTCCACTGTTTTTTTC+TGG | - | chr6_4:81923385-81923404 | None:intergenic | 35.0% |
| !! | ACGTCAACTTCTTTTTGACT+CGG | - | chr6_4:81923461-81923480 | None:intergenic | 35.0% |
| AAAAGAAGTTGACGTTGAGA+AGG | + | chr6_4:81923466-81923485 | Msa0999650:CDS | 35.0% | |
| CATCTGAACATGAATTACCA+GGG | - | chr6_4:81923538-81923557 | None:intergenic | 35.0% | |
| AAATTGCGAAGATGTATTGC+AGG | - | chr6_4:81923672-81923691 | None:intergenic | 35.0% | |
| ! | AAATTTTCATGCATTGGGGA+AGG | - | chr6_4:81923979-81923998 | None:intergenic | 35.0% |
| TTCACATGAACTAACTACTG+AGG | + | chr6_4:81924075-81924094 | Msa0999650:intron | 35.0% | |
| ! | TAAAGATAGGGGTAATGGTT+TGG | + | chr6_4:81924163-81924182 | Msa0999650:intron | 35.0% |
| TATAGATAGTCTGCTTTCCA+TGG | + | chr6_4:81924257-81924276 | Msa0999650:intron | 35.0% | |
| GGAATCCGAATTCTTTCTAA+TGG | - | chr6_4:81924288-81924307 | None:intergenic | 35.0% | |
| ATTCGGATTCCCTTCAATAA+AGG | + | chr6_4:81924297-81924316 | Msa0999650:intron | 35.0% | |
| AGCAGGATACCTTTATTGAA+GGG | - | chr6_4:81924309-81924328 | None:intergenic | 35.0% | |
| AAGCAGGATACCTTTATTGA+AGG | - | chr6_4:81924310-81924329 | None:intergenic | 35.0% | |
| !! | AATAAAGGTATCCTGCTTTC+AGG | + | chr6_4:81924312-81924331 | Msa0999650:intron | 35.0% |
| !! | GAACACTTTGTCTCTGAAAT+TGG | - | chr6_4:81924570-81924589 | None:intergenic | 35.0% |
| ! | AGAGACAAAGTGTTCTTCAT+TGG | + | chr6_4:81924575-81924594 | Msa0999650:intron | 35.0% |
| GATCCAATCAACAATGAAAC+TGG | + | chr6_4:81924624-81924643 | Msa0999650:CDS | 35.0% | |
| GGTTTGAAGAAGAAGGAAGA+AGG | - | chr6_4:81918725-81918744 | None:intergenic | 40.0% | |
| GAGAAAGGGTTTGAAGAAGA+AGG | - | chr6_4:81918732-81918751 | None:intergenic | 40.0% | |
| GAGAGAGAAAGTGAGAGAAA+GGG | - | chr6_4:81918746-81918765 | None:intergenic | 40.0% | |
| AGAGAGAGAAAGTGAGAGAA+AGG | - | chr6_4:81918747-81918766 | None:intergenic | 40.0% | |
| !!! | TGTGTTGTTTTAATGGCGGA+AGG | + | chr6_4:81919042-81919061 | Msa0999650:exon | 40.0% |
| GGATGAACAACATTCTTTGG+AGG | - | chr6_4:81919084-81919103 | None:intergenic | 40.0% | |
| TCCGGATGAACAACATTCTT+TGG | - | chr6_4:81919087-81919106 | None:intergenic | 40.0% | |
| GTCGTAACCGTAACAAATTC+CGG | - | chr6_4:81919105-81919124 | None:intergenic | 40.0% | |
| ! | ATTTGTTACGGTTACGACTG+CGG | + | chr6_4:81919107-81919126 | Msa0999650:CDS | 40.0% |
| CAATTCAACACTCTTCTGTG+AGG | + | chr6_4:81919343-81919362 | Msa0999650:CDS | 40.0% | |
| GACTGTGTTTAGTGTGTGTT+TGG | + | chr6_4:81919619-81919638 | Msa0999650:intron | 40.0% | |
| ! | AAAAGTGAGTTGAACTGAGG+TGG | + | chr6_4:81919671-81919690 | Msa0999650:intron | 40.0% |
| GAGGCAAAAGCAATTCTACA+TGG | + | chr6_4:81919775-81919794 | Msa0999650:intron | 40.0% | |
| AATGTATCGTGTTCTTCACG+AGG | + | chr6_4:81919870-81919889 | Msa0999650:intron | 40.0% | |
| TCACGAGGATTATATGTTGG+CGG | + | chr6_4:81919885-81919904 | Msa0999650:intron | 40.0% | |
| GTTATGGCTTGAAGTGAAGT+AGG | + | chr6_4:81920109-81920128 | Msa0999650:intron | 40.0% | |
| GCTTGTCAAAACACAAAGAC+AGG | - | chr6_4:81920400-81920419 | None:intergenic | 40.0% | |
| GTTAGGTCTTGATCTTGGTT+TGG | - | chr6_4:81920480-81920499 | None:intergenic | 40.0% | |
| ! | AAGGTACTCCAAAGAAGCAA+AGG | + | chr6_4:81920513-81920532 | Msa0999650:CDS | 40.0% |
| CGTGTGTGTGTTTCTTTCAA+TGG | + | chr6_4:81920598-81920617 | Msa0999650:intron | 40.0% | |
| CTACAGCAAAATTCCTGTCA+TGG | - | chr6_4:81920886-81920905 | None:intergenic | 40.0% | |
| ! | TTTTATCTCTCCTTTGGCAG+AGG | + | chr6_4:81921118-81921137 | Msa0999650:intron | 40.0% |
| CGACATCACTCAGTTGAATA+AGG | + | chr6_4:81921604-81921623 | Msa0999650:intron | 40.0% | |
| TCACTCAGTTGAATAAGGCT+TGG | + | chr6_4:81921609-81921628 | Msa0999650:intron | 40.0% | |
| TGCATATCTTCGCAAGAAGT+TGG | + | chr6_4:81921730-81921749 | Msa0999650:intron | 40.0% | |
| TATCTTCGCAAGAAGTTGGA+TGG | + | chr6_4:81921734-81921753 | Msa0999650:intron | 40.0% | |
| AATAAATGTAGGAGGAGGCT+GGG | + | chr6_4:81921949-81921968 | Msa0999650:intron | 40.0% | |
| !! | GGGTGCCATTGTAAAAAATC+TGG | + | chr6_4:81922002-81922021 | Msa0999650:CDS | 40.0% |
| !!! | GGCAGCCAGATTTTTTACAA+TGG | - | chr6_4:81922010-81922029 | None:intergenic | 40.0% |
| ! | ATGGACTGCAAGAACTTTGA+GGG | + | chr6_4:81922089-81922108 | Msa0999650:CDS | 40.0% |
| CAATGTGTATCTTCAGCAAG+CGG | + | chr6_4:81922154-81922173 | Msa0999650:CDS | 40.0% | |
| ! | TTTCTTTTCTTTGATGCGGG+AGG | - | chr6_4:81922227-81922246 | None:intergenic | 40.0% |
| CCCGCATCAAAGAAAAGAAA+AGG | + | chr6_4:81922227-81922246 | Msa0999650:CDS | 40.0% | |
| AAGGTCAGGAACTCTTCTTA+TGG | + | chr6_4:81922246-81922265 | Msa0999650:CDS | 40.0% | |
| ! | CTTGCTAATTGATGGATCCT+TGG | - | chr6_4:81922279-81922298 | None:intergenic | 40.0% |
| ! | GCAAATTTTACCTGTTGTCC+CGG | - | chr6_4:81922302-81922321 | None:intergenic | 40.0% |
| ! | TTACTATGTCGACTAGAGAC+TGG | - | chr6_4:81922407-81922426 | None:intergenic | 40.0% |
| TATCTGCAGACTATGGTGAA+TGG | + | chr6_4:81922634-81922653 | Msa0999650:intron | 40.0% | |
| AGACTATGGTGAATGGTATC+TGG | + | chr6_4:81922641-81922660 | Msa0999650:intron | 40.0% | |
| CGTGGTACAAATCCAACATT+AGG | + | chr6_4:81922791-81922810 | Msa0999650:CDS | 40.0% | |
| ! | TCAGTTCTGGTACTAGTATC+TGG | + | chr6_4:81922962-81922981 | Msa0999650:CDS | 40.0% |
| TGACTGGTATTAACCTAGAG+AGG | + | chr6_4:81923097-81923116 | Msa0999650:intron | 40.0% | |
| TGGAAAAGTGACACGTATAG+AGG | - | chr6_4:81923127-81923146 | None:intergenic | 40.0% | |
| TTACGAAAACAGGAAATGCG+TGG | - | chr6_4:81923147-81923166 | None:intergenic | 40.0% | |
| GATTATGCACTAGAGTCTAG+AGG | - | chr6_4:81923255-81923274 | None:intergenic | 40.0% | |
| CTGAGAATCACACTAAGGAT+CGG | + | chr6_4:81923293-81923312 | Msa0999650:intron | 40.0% | |
| !! | CTCTTGAGTTGATGAAGCAA+GGG | - | chr6_4:81923432-81923451 | None:intergenic | 40.0% |
| CAAACAGATAAAATCAGCCC+TGG | + | chr6_4:81923518-81923537 | Msa0999650:CDS | 40.0% | |
| CCATCTGAACATGAATTACC+AGG | - | chr6_4:81923539-81923558 | None:intergenic | 40.0% | |
| CCTGGTAATTCATGTTCAGA+TGG | + | chr6_4:81923536-81923555 | Msa0999650:CDS | 40.0% | |
| ATCTTGTTCGTCACACATCA+AGG | - | chr6_4:81923603-81923622 | None:intergenic | 40.0% | |
| ACATCTTCGCAATTTCCTGA+CGG | + | chr6_4:81923677-81923696 | Msa0999650:CDS | 40.0% | |
| ! | AGGGTCAAAGCACTAAAGAT+AGG | + | chr6_4:81924150-81924169 | Msa0999650:intron | 40.0% |
| ! | GGGTCAAAGCACTAAAGATA+GGG | + | chr6_4:81924151-81924170 | Msa0999650:intron | 40.0% |
| ! | GGTCAAAGCACTAAAGATAG+GGG | + | chr6_4:81924152-81924171 | Msa0999650:intron | 40.0% |
| AGCACTAAAGATAGGGGTAA+TGG | + | chr6_4:81924158-81924177 | Msa0999650:intron | 40.0% | |
| TCTTTCTAATGGCATTGCCA+TGG | - | chr6_4:81924277-81924296 | None:intergenic | 40.0% | |
| ! | AAGGGAAATTGGTGGTCATT+CGG | + | chr6_4:81924339-81924358 | Msa0999650:intron | 40.0% |
| TATTCACTCAGTCTGGACAT+CGG | - | chr6_4:81924461-81924480 | None:intergenic | 40.0% | |
| ATGTCCAGACTGAGTGAATA+TGG | + | chr6_4:81924461-81924480 | Msa0999650:intron | 40.0% | |
| TGTCCAGACTGAGTGAATAT+GGG | + | chr6_4:81924462-81924481 | Msa0999650:intron | 40.0% | |
| CTGATGTACTATCTCAGTAC+TGG | - | chr6_4:81924655-81924674 | None:intergenic | 40.0% | |
| TACTGAGATAGTACATCAGC+AGG | + | chr6_4:81924656-81924675 | Msa0999650:CDS | 40.0% | |
| TTTGACATCACCATTGCTAG+TGG | - | chr6_4:81924685-81924704 | None:intergenic | 40.0% | |
| GTTGAAGTTGTGGCAATATG+TGG | - | chr6_4:81924783-81924802 | None:intergenic | 40.0% | |
| ! | CTCTTTTTCCATCTTCAGCT+TGG | - | chr6_4:81924880-81924899 | None:intergenic | 40.0% |
| ! | GAGAGAGAGAAAGTGTGTGA+AGG | - | chr6_4:81918775-81918794 | None:intergenic | 45.0% |
| !! | GTTTTAATGGCGGAAGGTGA+AGG | + | chr6_4:81919048-81919067 | Msa0999650:exon | 45.0% |
| !! | GAGTGTTGAATTGTCTGCAC+CGG | - | chr6_4:81919336-81919355 | None:intergenic | 45.0% |
| AACACTCTTCTGTGAGGGTT+GGG | + | chr6_4:81919349-81919368 | Msa0999650:CDS | 45.0% | |
| CACGAGGATTATATGTTGGC+GGG | + | chr6_4:81919886-81919905 | Msa0999650:intron | 45.0% | |
| GAACAGAGTGTGTCAAACAG+CGG | - | chr6_4:81920238-81920257 | None:intergenic | 45.0% | |
| TTGCACTGCCTTTGCTTCTT+TGG | - | chr6_4:81920524-81920543 | None:intergenic | 45.0% | |
| AGTGTGTGCATAGCATGTAC+TGG | + | chr6_4:81920664-81920683 | Msa0999650:intron | 45.0% | |
| GGGAAATTCATACCCACTGT+GGG | - | chr6_4:81920846-81920865 | None:intergenic | 45.0% | |
| AATTCCTGTCATGGCAAGGT+CGG | - | chr6_4:81920877-81920896 | None:intergenic | 45.0% | |
| GCAAAATTCCTGTCATGGCA+AGG | - | chr6_4:81920881-81920900 | None:intergenic | 45.0% | |
| GTATAGTCATGGGTTTCCCA+TGG | + | chr6_4:81921016-81921035 | Msa0999650:intron | 45.0% | |
| TTGAGCCTAACTTTGGCCAT+GGG | - | chr6_4:81921035-81921054 | None:intergenic | 45.0% | |
| TTTGAGCCTAACTTTGGCCA+TGG | - | chr6_4:81921036-81921055 | None:intergenic | 45.0% | |
| TGACAAATGACCTCTGCCAA+AGG | - | chr6_4:81921131-81921150 | None:intergenic | 45.0% | |
| GCGTCGGGAATATATTGTGA+TGG | + | chr6_4:81921224-81921243 | Msa0999650:CDS | 45.0% | |
| ! | TAGGTCTAGCATTTTGTGGC+AGG | + | chr6_4:81921391-81921410 | Msa0999650:intron | 45.0% |
| GCAAGAAGTTGGATGGTTTC+TGG | + | chr6_4:81921741-81921760 | Msa0999650:intron | 45.0% | |
| CAATAAATGTAGGAGGAGGC+TGG | + | chr6_4:81921948-81921967 | Msa0999650:intron | 45.0% | |
| ATAAATGTAGGAGGAGGCTG+GGG | + | chr6_4:81921950-81921969 | Msa0999650:intron | 45.0% | |
| ! | CAGAACAAAGAACGTTGGCT+TGG | - | chr6_4:81922055-81922074 | None:intergenic | 45.0% |
| ! | CATGGACTGCAAGAACTTTG+AGG | + | chr6_4:81922088-81922107 | Msa0999650:CDS | 45.0% |
| GGAACCAATAGCTCCAGTTA+TGG | - | chr6_4:81922189-81922208 | None:intergenic | 45.0% | |
| !! | ACTGGAGCTATTGGTTCCTA+CGG | + | chr6_4:81922191-81922210 | Msa0999650:CDS | 45.0% |
| ! | ATTGATGGATCCTTGGCTGT+AGG | - | chr6_4:81922272-81922291 | None:intergenic | 45.0% |
| GGATCCATCAATTAGCAAGC+CGG | + | chr6_4:81922280-81922299 | Msa0999650:CDS | 45.0% | |
| GATCCATCAATTAGCAAGCC+GGG | + | chr6_4:81922281-81922300 | Msa0999650:CDS | 45.0% | |
| GCTCATTGCACAAGTAGTAC+TGG | + | chr6_4:81922320-81922339 | Msa0999650:intron | 45.0% | |
| !! | TGCACAAGTAGTACTGGTAC+AGG | + | chr6_4:81922326-81922345 | Msa0999650:intron | 45.0% |
| !! | GCACAAGTAGTACTGGTACA+GGG | + | chr6_4:81922327-81922346 | Msa0999650:intron | 45.0% |
| TGTCAGGTGAACCTTGTCAA+AGG | + | chr6_4:81922728-81922747 | Msa0999650:intron | 45.0% | |
| ! | GATGGACTCTGACCTAATGT+TGG | - | chr6_4:81922806-81922825 | None:intergenic | 45.0% |
| GAACTGAACAAAGCTCCTTC+AGG | - | chr6_4:81922949-81922968 | None:intergenic | 45.0% | |
| !! | GAAGGAGCTTTGTTCAGTTC+TGG | + | chr6_4:81922949-81922968 | Msa0999650:CDS | 45.0% |
| GTGAGCCTGATTACGAAAAC+AGG | - | chr6_4:81923157-81923176 | None:intergenic | 45.0% | |
| CAGAGCTGAGAATCACACTA+AGG | + | chr6_4:81923288-81923307 | Msa0999650:intron | 45.0% | |
| !! | GCTCTTGAGTTGATGAAGCA+AGG | - | chr6_4:81923433-81923452 | None:intergenic | 45.0% |
| AGTTGACGTTGAGAAGGCTA+TGG | + | chr6_4:81923472-81923491 | Msa0999650:CDS | 45.0% | |
| CGAAGATGTATTGCAGGCAT+GGG | - | chr6_4:81923666-81923685 | None:intergenic | 45.0% | |
| TTTCAGGCAGCAAGGGAAAT+TGG | + | chr6_4:81924328-81924347 | Msa0999650:intron | 45.0% | |
| CGGTAGTCATTCGATCAAGA+TGG | - | chr6_4:81924441-81924460 | None:intergenic | 45.0% | |
| GTCCAGACTGAGTGAATATG+GGG | + | chr6_4:81924463-81924482 | Msa0999650:intron | 45.0% | |
| TTCCCCATATTCACTCAGTC+TGG | - | chr6_4:81924468-81924487 | None:intergenic | 45.0% | |
| ATGGGGAATCCATGACTACA+AGG | + | chr6_4:81924480-81924499 | Msa0999650:intron | 45.0% | |
| TGGGGAATCCATGACTACAA+GGG | + | chr6_4:81924481-81924500 | Msa0999650:intron | 45.0% | |
| ATGTAGCTCCCTTGTAGTCA+TGG | - | chr6_4:81924492-81924511 | None:intergenic | 45.0% | |
| CAAAGCTGCATTTCCACCTA+TGG | + | chr6_4:81924701-81924720 | Msa0999650:CDS | 45.0% | |
| !! | AACTGCAGGTGTTGAAGTTG+CGG | - | chr6_4:81924727-81924746 | None:intergenic | 45.0% |
| !! | AACTGCAGGTGTTGAAGTTG+TGG | - | chr6_4:81924727-81924746 | None:intergenic | 45.0% |
| !! | AACTGCAGGTGTTGAAGTTG+TGG | - | chr6_4:81924727-81924746 | None:intergenic | 45.0% |
| ACAGTATCAATAGGGACCAC+AGG | - | chr6_4:81924840-81924859 | None:intergenic | 45.0% | |
| TGGAGAATCCAAGCTGAAGA+TGG | + | chr6_4:81924869-81924888 | Msa0999650:CDS | 45.0% | |
| !!! | AAATTTATTTGTTTTTAATA+GGG | - | chr6_4:81920919-81920938 | None:intergenic | 5.0% |
| !!! | AAAATTTATTTGTTTTTAAT+AGG | - | chr6_4:81920920-81920939 | None:intergenic | 5.0% |
| !! | GTAAAATTAAATTAAAAATA+AGG | - | chr6_4:81923816-81923835 | None:intergenic | 5.0% |
| !!! | TTTTAATTTAATTTTACATT+TGG | + | chr6_4:81923819-81923838 | Msa0999650:intron | 5.0% |
| GAGGGAAGAATCGTAATCGG+TGG | + | chr6_4:81918963-81918982 | Msa0999650:five_prime_UTR | 50.0% | |
| GGAAGAATCGTAATCGGTGG+TGG | + | chr6_4:81918966-81918985 | Msa0999650:five_prime_UTR | 50.0% | |
| ! | TTAATGGCGGAAGGTGAAGG+AGG | + | chr6_4:81919051-81919070 | Msa0999650:exon | 50.0% |
| TGTTGAACCACCTGCTGTTG+CGG | - | chr6_4:81919246-81919265 | None:intergenic | 50.0% | |
| CAACAGCAGGTGGTTCAACA+GGG | + | chr6_4:81919246-81919265 | Msa0999650:CDS | 50.0% | |
| AACAGCAGGTGGTTCAACAG+GGG | + | chr6_4:81919247-81919266 | Msa0999650:CDS | 50.0% | |
| CAACACTCTTCTGTGAGGGT+TGG | + | chr6_4:81919348-81919367 | Msa0999650:CDS | 50.0% | |
| AAGTAGGCACTTCCCAGTCA+TGG | + | chr6_4:81920125-81920144 | Msa0999650:intron | 50.0% | |
| ! | CTGTTTGCAATCGCGGATTG+TGG | + | chr6_4:81920157-81920176 | Msa0999650:intron | 50.0% |
| GTGTCAAACAGCGGCTATAG+TGG | - | chr6_4:81920229-81920248 | None:intergenic | 50.0% | |
| CATCTAACTGGACCCACAGT+GGG | + | chr6_4:81920831-81920850 | Msa0999650:intron | 50.0% | |
| CGGGAAATTCATACCCACTG+TGG | - | chr6_4:81920847-81920866 | None:intergenic | 50.0% | |
| GGTTTCCCATGGCCAAAGTT+AGG | + | chr6_4:81921027-81921046 | Msa0999650:intron | 50.0% | |
| CAATGAAGCTGCTAGACGAG+AGG | + | chr6_4:81921280-81921299 | Msa0999650:CDS | 50.0% | |
| ! | TGAGGGCTGCTCGCAATTTT+GGG | - | chr6_4:81921347-81921366 | None:intergenic | 50.0% |
| AAAATTGCGAGCAGCCCTCA+GGG | + | chr6_4:81921347-81921366 | Msa0999650:CDS | 50.0% | |
| ! | ACTGAGTGATGTCGGCTACA+TGG | - | chr6_4:81921598-81921617 | None:intergenic | 50.0% |
| TGAGGGAAGTGAAGAGAGAC+AGG | + | chr6_4:81922106-81922125 | Msa0999650:CDS | 50.0% | |
| !! | GAGAGACAGGCTTTGTTTCG+TGG | + | chr6_4:81922119-81922138 | Msa0999650:CDS | 50.0% |
| GCTGCCATAACTGGAGCTAT+TGG | + | chr6_4:81922182-81922201 | Msa0999650:CDS | 50.0% | |
| CTTCTTATGGCCTACAGCCA+AGG | + | chr6_4:81922259-81922278 | Msa0999650:CDS | 50.0% | |
| !! | TGTCCCGGCTTGCTAATTGA+TGG | - | chr6_4:81922287-81922306 | None:intergenic | 50.0% |
| AATTAGCAAGCCGGGACAAC+AGG | + | chr6_4:81922289-81922308 | Msa0999650:CDS | 50.0% | |
| ACAGGTGAAGCTGATGAGGA+GGG | - | chr6_4:81922761-81922780 | None:intergenic | 50.0% | |
| TGAGACAGGTGAAGCTGATG+AGG | - | chr6_4:81922765-81922784 | None:intergenic | 50.0% | |
| TGTACAGCCACATCACCTGA+AGG | + | chr6_4:81922931-81922950 | Msa0999650:CDS | 50.0% | |
| CAAAGCTCCTTCAGGTGATG+TGG | - | chr6_4:81922941-81922960 | None:intergenic | 50.0% | |
| GTATAGAGGAGAGCCTCTCT+AGG | - | chr6_4:81923113-81923132 | None:intergenic | 50.0% | |
| ! | CAGGAGACATCGGTCTTTTC+GGG | - | chr6_4:81923571-81923590 | None:intergenic | 50.0% |
| ! | CCAGGAGACATCGGTCTTTT+CGG | - | chr6_4:81923572-81923591 | None:intergenic | 50.0% |
| CGAAAAGACCGATGTCTCCT+GGG | + | chr6_4:81923570-81923589 | Msa0999650:CDS | 50.0% | |
| GCTAAAGTCCCAGGAGACAT+CGG | - | chr6_4:81923581-81923600 | None:intergenic | 50.0% | |
| CACATCAAGGCTAAAGTCCC+AGG | - | chr6_4:81923590-81923609 | None:intergenic | 50.0% | |
| GCGAAGATGTATTGCAGGCA+TGG | - | chr6_4:81923667-81923686 | None:intergenic | 50.0% | |
| ! | TCGCAATTTCCTGACGGACA+AGG | + | chr6_4:81923683-81923702 | Msa0999650:CDS | 50.0% |
| TATCCTGCTTTCAGGCAGCA+AGG | + | chr6_4:81924320-81924339 | Msa0999650:intron | 50.0% | |
| ATCCTGCTTTCAGGCAGCAA+GGG | + | chr6_4:81924321-81924340 | Msa0999650:intron | 50.0% | |
| AACACCTGCAGTTCCACCTA+TGG | + | chr6_4:81924734-81924753 | Msa0999650:CDS | 50.0% | |
| GTTGAAGTTGTGGCCATAGG+TGG | - | chr6_4:81924750-81924769 | None:intergenic | 50.0% | |
| ! | GGTGTTGAAGTTGTGGCCAT+AGG | - | chr6_4:81924753-81924772 | None:intergenic | 50.0% |
| GTGGCAATATGTGGAACTGC+AGG | - | chr6_4:81924774-81924793 | None:intergenic | 50.0% | |
| AACACCTGCAGTTCCACCTA+TGG | + | chr6_4:81924734-81924753 | Msa0999650:CDS | 50.0% | |
| !! | GACCACAGGTGTTGAAGTTG+CGG | - | chr6_4:81924826-81924845 | None:intergenic | 50.0% |
| TACCGTCGAAGAAGCTAGCG+AGG | + | chr6_4:81919181-81919200 | Msa0999650:CDS | 55.0% | |
| ! | TGCCTCGCTAGCTTCTTCGA+CGG | - | chr6_4:81919186-81919205 | None:intergenic | 55.0% |
| GCAACAGCAGGTGGTTCAAC+AGG | + | chr6_4:81919245-81919264 | Msa0999650:CDS | 55.0% | |
| ! | GGTTCAACAGGGGAGTGTGA+CGG | + | chr6_4:81919257-81919276 | Msa0999650:CDS | 55.0% |
| GAGTGTGACGGTGCAGAAAC+CGG | + | chr6_4:81919269-81919288 | Msa0999650:CDS | 55.0% | |
| GTGCAGAAACCGGTTGGAGT+GGG | + | chr6_4:81919279-81919298 | Msa0999650:CDS | 55.0% | |
| ! | AGTGGGTGGTTTGCCGATAC+CGG | + | chr6_4:81919296-81919315 | Msa0999650:CDS | 55.0% |
| ! | TGGTTTGCCGATACCGGTAC+CGG | + | chr6_4:81919302-81919321 | Msa0999650:CDS | 55.0% |
| ! | TGAATTGTCTGCACCGGCGT+TGG | - | chr6_4:81919330-81919349 | None:intergenic | 55.0% |
| GCATCTAACTGGACCCACAG+TGG | + | chr6_4:81920830-81920849 | Msa0999650:intron | 55.0% | |
| ! | CTGAGGGCTGCTCGCAATTT+TGG | - | chr6_4:81921348-81921367 | None:intergenic | 55.0% |
| CAAAATTGCGAGCAGCCCTC+AGG | + | chr6_4:81921346-81921365 | Msa0999650:CDS | 55.0% | |
| CACGCGATAGCAGGGTAAGT+AGG | + | chr6_4:81921372-81921391 | Msa0999650:intron | 55.0% | |
| GCGGCAAATGCTGCCATAAC+TGG | + | chr6_4:81922173-81922192 | Msa0999650:CDS | 55.0% | |
| GGGAGGTGATGAAAAGCCGT+AGG | - | chr6_4:81922210-81922229 | None:intergenic | 55.0% | |
| !! | AGGGTGCTGGACCTTTGACA+AGG | - | chr6_4:81922742-81922761 | None:intergenic | 55.0% |
| GACAGGTGAAGCTGATGAGG+AGG | - | chr6_4:81922762-81922781 | None:intergenic | 55.0% | |
| CTGCAAGCGTCTTTGCAGCT+TGG | - | chr6_4:81922988-81923007 | None:intergenic | 55.0% | |
| CAAGCTGCAAAGACGCTTGC+AGG | + | chr6_4:81922986-81923005 | Msa0999650:CDS | 55.0% | |
| CCGAAAAGACCGATGTCTCC+TGG | + | chr6_4:81923569-81923588 | Msa0999650:CDS | 55.0% | |
| ATGACAGCTGCCTCTCCCAT+CGG | + | chr6_4:81923632-81923651 | Msa0999650:CDS | 55.0% | |
| TCTGTCACTCCTTGTCCGTC+AGG | - | chr6_4:81923695-81923714 | None:intergenic | 55.0% | |
| ! | TGACGGACAAGGAGTGACAG+AGG | + | chr6_4:81923694-81923713 | Msa0999650:CDS | 55.0% |
| TTCCCTTGCTGCCTGAAAGC+AGG | - | chr6_4:81924326-81924345 | None:intergenic | 55.0% | |
| CAGGCAGCAAGGGAAATTGG+TGG | + | chr6_4:81924331-81924350 | Msa0999650:intron | 55.0% | |
| CAGCAGGAAGCCACTAGCAA+TGG | + | chr6_4:81924672-81924691 | Msa0999650:CDS | 55.0% | |
| GTTGAAGTTGCGGCCATAGG+TGG | - | chr6_4:81924717-81924736 | None:intergenic | 55.0% | |
| ! | GGTGTTGAAGTTGCGGCCAT+AGG | - | chr6_4:81924720-81924739 | None:intergenic | 55.0% |
| GTTGAAGTTGCGGCCATAGG+TGG | - | chr6_4:81924717-81924736 | None:intergenic | 55.0% | |
| ! | GGTGTTGAAGTTGCGGCCAT+AGG | - | chr6_4:81924720-81924739 | None:intergenic | 55.0% |
| GGTTACGACTGCGGCTGCAA+CGG | + | chr6_4:81919116-81919135 | Msa0999650:CDS | 60.0% | |
| GGCTGCAAATGCGACTGCGA+CGG | + | chr6_4:81919146-81919165 | Msa0999650:CDS | 60.0% | |
| GCAGTCGAAACCGCAACAGC+AGG | + | chr6_4:81919233-81919252 | Msa0999650:CDS | 60.0% | |
| GTCGAAACCGCAACAGCAGG+TGG | + | chr6_4:81919236-81919255 | Msa0999650:CDS | 60.0% | |
| GTGACGGTGCAGAAACCGGT+TGG | + | chr6_4:81919273-81919292 | Msa0999650:CDS | 60.0% | |
| GGTGCAGAAACCGGTTGGAG+TGG | + | chr6_4:81919278-81919297 | Msa0999650:CDS | 60.0% | |
| CAGAAACCGGTTGGAGTGGG+TGG | + | chr6_4:81919282-81919301 | Msa0999650:CDS | 60.0% | |
| GGCAAACCACCCACTCCAAC+CGG | - | chr6_4:81919291-81919310 | None:intergenic | 60.0% | |
| !! | GTTGGCACCGGTACCGGTAT+CGG | - | chr6_4:81919312-81919331 | None:intergenic | 60.0% |
| TCCTGTCATGGCAAGGTCGG+CGG | - | chr6_4:81920874-81920893 | None:intergenic | 60.0% | |
| TGCTATCGCGTGCTCCCTGA+GGG | - | chr6_4:81921364-81921383 | None:intergenic | 60.0% | |
| ! | TCAGGGAGCACGCGATAGCA+GGG | + | chr6_4:81921364-81921383 | Msa0999650:CDS | 60.0% |
| ATGTAGGAGGAGGCTGGGGA+AGG | + | chr6_4:81921954-81921973 | Msa0999650:intron | 60.0% | |
| ! | GAAGCTGATGAGGAGGGTGC+TGG | - | chr6_4:81922755-81922774 | None:intergenic | 60.0% |
| TCACCTGTCTCAAGTGCCCG+TGG | + | chr6_4:81922773-81922792 | Msa0999650:CDS | 60.0% | |
| GTACCACGGGCACTTGAGAC+AGG | - | chr6_4:81922779-81922798 | None:intergenic | 60.0% | |
| TGACAGCTGCCTCTCCCATC+GGG | + | chr6_4:81923633-81923652 | Msa0999650:CDS | 60.0% | |
| GCATGGGTCGTTTGCCCGAT+GGG | - | chr6_4:81923650-81923669 | None:intergenic | 60.0% | |
| GTGGCCATAGGTGGAACTGC+AGG | - | chr6_4:81924741-81924760 | None:intergenic | 60.0% | |
| GGCCGCAACTTCAACACCTG+TGG | + | chr6_4:81924722-81924741 | Msa0999650:CDS | 60.0% | |
| TACGACTGCGGCTGCAACGG+CGG | + | chr6_4:81919119-81919138 | Msa0999650:CDS | 65.0% | |
| CAAATGCGACTGCGACGGCG+TGG | + | chr6_4:81919151-81919170 | Msa0999650:CDS | 65.0% | |
| GTCATGGCAAGGTCGGCGGA+CGG | - | chr6_4:81920870-81920889 | None:intergenic | 65.0% | |
| TCCGCCGACCTTGCCATGAC+AGG | + | chr6_4:81920870-81920889 | Msa0999650:intron | 65.0% | |
| CTGCTATCGCGTGCTCCCTG+AGG | - | chr6_4:81921365-81921384 | None:intergenic | 65.0% | |
| ! | CTCAGGGAGCACGCGATAGC+AGG | + | chr6_4:81921363-81921382 | Msa0999650:CDS | 65.0% |
| GGTCGTTTGCCCGATGGGAG+AGG | - | chr6_4:81923645-81923664 | None:intergenic | 65.0% | |
| GGCATGGGTCGTTTGCCCGA+TGG | - | chr6_4:81923651-81923670 | None:intergenic | 65.0% | |
| GCGGCCATAGGTGGAACTGC+AGG | - | chr6_4:81924807-81924826 | None:intergenic | 65.0% | |
| TGCGACTGCGACGGCGTGGT+TGG | + | chr6_4:81919155-81919174 | Msa0999650:CDS | 70.0% | |
| !! | ACCGGTACCGGTGCCAACGC+CGG | + | chr6_4:81919314-81919333 | Msa0999650:CDS | 70.0% |
| !! | ACCGGCGTTGGCACCGGTAC+CGG | - | chr6_4:81919318-81919337 | None:intergenic | 70.0% |
| !! | GTCTGCACCGGCGTTGGCAC+CGG | - | chr6_4:81919324-81919343 | None:intergenic | 70.0% |
| ATGGCAAGGTCGGCGGACGG+CGG | - | chr6_4:81920867-81920886 | None:intergenic | 70.0% | |
| TGCGGCTGCAACGGCGGCTG+CGG | + | chr6_4:81919125-81919144 | Msa0999650:CDS | 75.0% | |
| TGGCAAGGTCGGCGGACGGC+GGG | - | chr6_4:81920866-81920885 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 81918692 | 81924905 | 81918692 | ID=Msa0999650;Name=Msa0999650 |
| chr6_4 | mRNA | 81918692 | 81924905 | 81918692 | ID=Msa0999650-mRNA-1;Parent=Msa0999650;Name=Msa0999650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=362|1|0.87|1|1|1|8|0|633 |
| chr6_4 | exon | 81918692 | 81919370 | 81918692 | ID=Msa0999650-mRNA-1:exon:15657;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81920463 | 81920570 | 81920463 | ID=Msa0999650-mRNA-1:exon:15658;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81921208 | 81921385 | 81921208 | ID=Msa0999650-mRNA-1:exon:15659;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81921960 | 81922310 | 81921960 | ID=Msa0999650-mRNA-1:exon:15660;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81922734 | 81922840 | 81922734 | ID=Msa0999650-mRNA-1:exon:15661;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81922913 | 81923007 | 81922913 | ID=Msa0999650-mRNA-1:exon:15662;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81923381 | 81923797 | 81923381 | ID=Msa0999650-mRNA-1:exon:15663;Parent=Msa0999650-mRNA-1 |
| chr6_4 | exon | 81924577 | 81924905 | 81924577 | ID=Msa0999650-mRNA-1:exon:15664;Parent=Msa0999650-mRNA-1 |
| chr6_4 | five_prime_UTR | 81918692 | 81919053 | 81918692 | ID=Msa0999650-mRNA-1:five_prime_utr;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81919054 | 81919370 | 81919054 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81920463 | 81920570 | 81920463 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81921208 | 81921385 | 81921208 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81921960 | 81922310 | 81921960 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81922734 | 81922840 | 81922734 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81922913 | 81923007 | 81922913 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81923381 | 81923797 | 81923381 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| chr6_4 | CDS | 81924577 | 81924905 | 81924577 | ID=Msa0999650-mRNA-1:cds;Parent=Msa0999650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
