Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0999810 | XP_003620628.1 | 85.132 | 417 | 16 | 2 | 1 | 371 | 1 | 417 | 0.0 | 706 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0999810 | sp|O80345|CDKF1_ARATH | 51.598 | 438 | 145 | 5 | 4 | 376 | 5 | 440 | 2.47e-147 | 428 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0999810 | G7KPF7 | 85.132 | 417 | 16 | 2 | 1 | 371 | 1 | 417 | 0.0 | 706 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
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PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0999810 | MtrunA17_Chr6g0486031 | 85.132 | 417 | 16 | 2 | 1 | 371 | 1 | 417 | 0.0 | 706 |
Msa0999810 | MtrunA17_Chr8g0390341 | 57.955 | 440 | 116 | 7 | 1 | 376 | 1 | 435 | 4.40e-168 | 478 |
Msa0999810 | MtrunA17_Chr4g0057791 | 39.716 | 141 | 79 | 1 | 226 | 360 | 377 | 517 | 3.50e-28 | 115 |
Msa0999810 | MtrunA17_Chr4g0051261 | 40.152 | 132 | 77 | 2 | 225 | 356 | 160 | 289 | 1.70e-27 | 110 |
Msa0999810 | MtrunA17_Chr6g0483151 | 34.899 | 149 | 94 | 1 | 225 | 373 | 168 | 313 | 1.96e-27 | 112 |
Msa0999810 | MtrunA17_Chr2g0293491 | 37.121 | 132 | 81 | 2 | 225 | 356 | 160 | 289 | 1.52e-26 | 107 |
Msa0999810 | MtrunA17_Chr8g0377071 | 40.141 | 142 | 77 | 2 | 226 | 360 | 542 | 682 | 2.79e-26 | 110 |
Msa0999810 | MtrunA17_Chr3g0093391 | 39.855 | 138 | 78 | 2 | 225 | 360 | 194 | 328 | 7.31e-26 | 108 |
Msa0999810 | MtrunA17_Chr7g0218071 | 42.963 | 135 | 74 | 3 | 225 | 358 | 277 | 409 | 7.99e-26 | 109 |
Msa0999810 | MtrunA17_Chr3g0093571 | 39.855 | 138 | 78 | 2 | 225 | 360 | 196 | 330 | 1.06e-25 | 108 |
Msa0999810 | MtrunA17_Chr3g0122781 | 36.646 | 161 | 71 | 4 | 226 | 360 | 573 | 728 | 1.73e-25 | 108 |
Msa0999810 | MtrunA17_Chr5g0396361 | 40.397 | 151 | 83 | 6 | 225 | 372 | 297 | 443 | 3.46e-25 | 107 |
Msa0999810 | MtrunA17_Chr2g0317501 | 37.500 | 160 | 89 | 5 | 218 | 372 | 284 | 437 | 1.31e-24 | 105 |
Msa0999810 | MtrunA17_Chr4g0066691 | 37.410 | 139 | 75 | 3 | 225 | 358 | 261 | 392 | 2.25e-24 | 104 |
Msa0999810 | MtrunA17_Chr8g0369451 | 38.760 | 129 | 78 | 1 | 226 | 354 | 156 | 283 | 5.64e-24 | 102 |
Msa0999810 | MtrunA17_Chr3g0131861 | 39.855 | 138 | 73 | 4 | 225 | 358 | 254 | 385 | 6.24e-24 | 103 |
Msa0999810 | MtrunA17_Chr4g0040141 | 36.054 | 147 | 84 | 3 | 218 | 360 | 279 | 419 | 6.82e-24 | 103 |
Msa0999810 | MtrunA17_Chr6g0453711 | 39.259 | 135 | 80 | 2 | 225 | 359 | 267 | 399 | 8.17e-24 | 103 |
Msa0999810 | MtrunA17_Chr7g0248461 | 37.086 | 151 | 71 | 3 | 224 | 359 | 194 | 335 | 8.60e-24 | 101 |
Msa0999810 | MtrunA17_Chr1g0187371 | 34.884 | 129 | 81 | 1 | 226 | 354 | 183 | 308 | 1.59e-23 | 99.8 |
Msa0999810 | MtrunA17_Chr3g0141871 | 27.568 | 370 | 194 | 12 | 11 | 363 | 23 | 335 | 1.64e-23 | 100 |
Msa0999810 | MtrunA17_Chr4g0061141 | 39.130 | 138 | 74 | 4 | 225 | 358 | 262 | 393 | 1.98e-23 | 102 |
Msa0999810 | MtrunA17_Chr2g0286421 | 38.806 | 134 | 80 | 2 | 225 | 358 | 259 | 390 | 2.50e-23 | 101 |
Msa0999810 | MtrunA17_Chr8g0378831 | 35.374 | 147 | 88 | 1 | 224 | 363 | 189 | 335 | 2.84e-23 | 99.8 |
Msa0999810 | MtrunA17_Chr5g0409421 | 36.434 | 129 | 81 | 1 | 226 | 354 | 156 | 283 | 3.14e-23 | 100 |
Msa0999810 | MtrunA17_Chr7g0273601 | 37.681 | 138 | 76 | 4 | 225 | 358 | 264 | 395 | 5.05e-23 | 100 |
Msa0999810 | MtrunA17_Chr3g0130781 | 37.241 | 145 | 79 | 2 | 228 | 360 | 190 | 334 | 5.59e-23 | 100 |
Msa0999810 | MtrunA17_Chr4g0045841 | 35.714 | 140 | 73 | 2 | 224 | 355 | 211 | 341 | 6.74e-23 | 99.0 |
Msa0999810 | MtrunA17_Chr2g0324461 | 35.948 | 153 | 87 | 4 | 225 | 372 | 298 | 444 | 1.73e-22 | 99.4 |
Msa0999810 | MtrunA17_Chr3g0099951 | 34.483 | 145 | 86 | 2 | 231 | 372 | 176 | 314 | 1.86e-22 | 97.8 |
Msa0999810 | MtrunA17_Chr4g0002001 | 36.434 | 129 | 79 | 2 | 226 | 354 | 178 | 303 | 3.93e-22 | 95.5 |
Msa0999810 | MtrunA17_Chr1g0191221 | 35.948 | 153 | 87 | 5 | 225 | 372 | 279 | 425 | 4.07e-22 | 98.2 |
Msa0999810 | MtrunA17_Chr3g0102571 | 34.211 | 152 | 76 | 4 | 217 | 356 | 229 | 368 | 5.55e-22 | 96.7 |
Msa0999810 | MtrunA17_Chr1g0194201 | 38.462 | 130 | 78 | 1 | 227 | 356 | 234 | 361 | 1.18e-21 | 95.5 |
Msa0999810 | MtrunA17_Chr4g0065851 | 38.806 | 134 | 79 | 2 | 224 | 355 | 185 | 317 | 1.39e-21 | 96.3 |
Msa0999810 | MtrunA17_Chr8g0387401 | 35.333 | 150 | 86 | 4 | 224 | 364 | 208 | 355 | 3.13e-21 | 94.0 |
Msa0999810 | MtrunA17_Chr5g0397261 | 33.553 | 152 | 77 | 3 | 224 | 360 | 197 | 339 | 3.61e-21 | 94.0 |
Msa0999810 | MtrunA17_Chr1g0193081 | 37.692 | 130 | 79 | 1 | 227 | 356 | 234 | 361 | 4.40e-21 | 94.0 |
Msa0999810 | MtrunA17_Chr7g0270371 | 37.692 | 130 | 79 | 1 | 227 | 356 | 234 | 361 | 4.61e-21 | 94.0 |
Msa0999810 | MtrunA17_Chr4g0030151 | 34.507 | 142 | 75 | 2 | 224 | 356 | 195 | 327 | 8.74e-21 | 92.8 |
Msa0999810 | MtrunA17_Chr8g0339221 | 35.606 | 132 | 79 | 2 | 226 | 354 | 156 | 284 | 1.29e-20 | 92.8 |
Msa0999810 | MtrunA17_Chr7g0246591 | 34.211 | 152 | 87 | 3 | 227 | 376 | 300 | 440 | 1.41e-20 | 92.8 |
Msa0999810 | MtrunA17_Chr8g0392811 | 35.099 | 151 | 89 | 3 | 224 | 366 | 277 | 426 | 2.01e-20 | 92.8 |
Msa0999810 | MtrunA17_Chr2g0320011 | 36.154 | 130 | 81 | 1 | 227 | 356 | 247 | 374 | 3.32e-20 | 91.7 |
Msa0999810 | MtrunA17_Chr2g0284091 | 36.923 | 130 | 80 | 1 | 227 | 356 | 199 | 326 | 3.44e-20 | 90.9 |
Msa0999810 | MtrunA17_Chr2g0287271 | 35.762 | 151 | 88 | 3 | 224 | 366 | 185 | 334 | 3.73e-20 | 92.0 |
Msa0999810 | MtrunA17_Chr2g0277011 | 36.641 | 131 | 81 | 1 | 226 | 356 | 248 | 376 | 5.87e-20 | 90.9 |
Msa0999810 | MtrunA17_Chr8g0350311 | 35.385 | 130 | 82 | 1 | 227 | 356 | 298 | 425 | 1.51e-19 | 89.7 |
Msa0999810 | MtrunA17_Chr8g0385971 | 34.266 | 143 | 88 | 3 | 218 | 358 | 240 | 378 | 3.12e-19 | 89.4 |
Msa0999810 | MtrunA17_Chr4g0030231 | 31.953 | 169 | 90 | 4 | 224 | 376 | 196 | 355 | 6.73e-19 | 87.4 |
Msa0999810 | MtrunA17_Chr8g0348481 | 31.788 | 151 | 79 | 3 | 224 | 359 | 193 | 334 | 9.68e-19 | 86.7 |
Msa0999810 | MtrunA17_Chr8g0358921 | 33.846 | 130 | 76 | 2 | 229 | 354 | 212 | 335 | 1.08e-18 | 86.3 |
Msa0999810 | MtrunA17_Chr8g0359091 | 38.816 | 152 | 82 | 4 | 224 | 366 | 186 | 335 | 2.14e-18 | 86.7 |
Msa0999810 | MtrunA17_Chr2g0314321 | 26.997 | 363 | 185 | 12 | 19 | 354 | 24 | 333 | 3.55e-18 | 86.3 |
Msa0999810 | MtrunA17_Chr6g0482681 | 38.346 | 133 | 79 | 2 | 224 | 354 | 249 | 380 | 4.47e-18 | 85.9 |
Msa0999810 | MtrunA17_Chr1g0201571 | 36.552 | 145 | 88 | 2 | 222 | 366 | 280 | 420 | 6.51e-18 | 85.5 |
Msa0999810 | MtrunA17_Chr5g0443351 | 27.143 | 350 | 184 | 11 | 19 | 354 | 21 | 313 | 8.67e-18 | 84.7 |
Msa0999810 | MtrunA17_Chr3g0096631 | 35.762 | 151 | 88 | 3 | 224 | 366 | 185 | 334 | 1.27e-16 | 81.6 |
Msa0999810 | MtrunA17_Chr3g0102601 | 35.246 | 122 | 72 | 2 | 238 | 356 | 89 | 206 | 1.32e-15 | 75.9 |
Msa0999810 | MtrunA17_Chr8g0383451 | 35.294 | 153 | 87 | 4 | 220 | 368 | 150 | 294 | 9.95e-15 | 75.5 |
Msa0999810 | MtrunA17_Chr4g0030241 | 44.118 | 68 | 38 | 0 | 224 | 291 | 57 | 124 | 1.67e-14 | 71.2 |
Msa0999810 | MtrunA17_Chr5g0401371 | 32.836 | 134 | 83 | 3 | 229 | 355 | 268 | 401 | 7.03e-13 | 69.3 |
Msa0999810 | MtrunA17_Chr4g0053951 | 32.090 | 134 | 84 | 3 | 229 | 355 | 273 | 406 | 1.51e-12 | 68.6 |
Msa0999810 | MtrunA17_Chr8g0360761 | 33.333 | 126 | 68 | 2 | 229 | 354 | 75 | 184 | 8.58e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0999810 | AT4G28980.3 | 51.598 | 438 | 145 | 5 | 4 | 376 | 5 | 440 | 2.51e-148 | 428 |
Msa0999810 | AT4G28980.1 | 51.598 | 438 | 145 | 5 | 4 | 376 | 5 | 440 | 2.51e-148 | 428 |
Msa0999810 | AT4G28980.2 | 51.598 | 438 | 145 | 5 | 4 | 376 | 5 | 440 | 2.51e-148 | 428 |
Msa0999810 | AT3G48750.1 | 42.424 | 132 | 74 | 2 | 225 | 356 | 160 | 289 | 4.59e-31 | 120 |
Msa0999810 | AT1G18040.1 | 36.242 | 149 | 92 | 1 | 225 | 373 | 166 | 311 | 6.77e-31 | 121 |
Msa0999810 | AT1G66750.1 | 36.913 | 149 | 91 | 1 | 225 | 373 | 167 | 312 | 8.88e-31 | 120 |
Msa0999810 | AT1G73690.1 | 35.526 | 152 | 93 | 2 | 225 | 376 | 165 | 311 | 8.57e-29 | 115 |
Msa0999810 | AT1G20930.1 | 37.594 | 133 | 80 | 1 | 226 | 358 | 181 | 310 | 7.45e-27 | 109 |
Msa0999810 | AT1G59580.2 | 28.814 | 354 | 187 | 9 | 11 | 355 | 23 | 320 | 9.18e-27 | 110 |
Msa0999810 | AT1G59580.1 | 28.814 | 354 | 187 | 9 | 11 | 355 | 23 | 320 | 9.18e-27 | 110 |
Msa0999810 | AT5G10270.1 | 39.286 | 140 | 80 | 2 | 223 | 360 | 195 | 331 | 1.69e-26 | 110 |
Msa0999810 | AT4G19110.3 | 38.462 | 130 | 79 | 1 | 225 | 354 | 99 | 227 | 1.95e-26 | 109 |
Msa0999810 | AT4G10010.1 | 38.816 | 152 | 90 | 3 | 222 | 372 | 130 | 279 | 4.02e-26 | 109 |
Msa0999810 | AT4G19110.2 | 38.462 | 130 | 79 | 1 | 225 | 354 | 155 | 283 | 4.29e-26 | 109 |
Msa0999810 | AT4G19110.1 | 38.462 | 130 | 79 | 1 | 225 | 354 | 155 | 283 | 4.61e-26 | 109 |
Msa0999810 | AT1G67580.1 | 40.845 | 142 | 76 | 2 | 226 | 360 | 563 | 703 | 4.64e-26 | 110 |
Msa0999810 | AT1G67580.2 | 40.845 | 142 | 76 | 2 | 226 | 360 | 563 | 703 | 4.64e-26 | 110 |
Msa0999810 | AT4G10010.2 | 38.816 | 152 | 90 | 3 | 222 | 372 | 310 | 459 | 8.52e-26 | 109 |
Msa0999810 | AT5G64960.2 | 39.286 | 140 | 80 | 2 | 223 | 360 | 142 | 278 | 1.00e-25 | 108 |
Msa0999810 | AT5G64960.1 | 39.286 | 140 | 80 | 2 | 223 | 360 | 195 | 331 | 1.29e-25 | 108 |
Msa0999810 | AT1G76540.1 | 36.842 | 133 | 81 | 1 | 226 | 358 | 179 | 308 | 2.37e-25 | 105 |
Msa0999810 | AT1G74330.3 | 39.568 | 139 | 74 | 3 | 225 | 359 | 280 | 412 | 1.11e-24 | 106 |
Msa0999810 | AT1G10210.2 | 28.242 | 347 | 198 | 10 | 11 | 355 | 23 | 320 | 1.13e-24 | 103 |
Msa0999810 | AT1G10210.3 | 28.242 | 347 | 198 | 10 | 11 | 355 | 23 | 320 | 1.13e-24 | 103 |
Msa0999810 | AT1G10210.1 | 28.242 | 347 | 198 | 10 | 11 | 355 | 23 | 320 | 1.13e-24 | 103 |
Msa0999810 | AT1G74330.2 | 39.568 | 139 | 74 | 3 | 225 | 359 | 280 | 412 | 1.15e-24 | 106 |
Msa0999810 | AT1G74330.1 | 39.568 | 139 | 74 | 3 | 225 | 359 | 280 | 412 | 1.29e-24 | 106 |
Msa0999810 | AT3G01085.3 | 40.299 | 134 | 79 | 1 | 225 | 358 | 272 | 404 | 1.86e-24 | 105 |
Msa0999810 | AT3G01085.1 | 40.299 | 134 | 79 | 1 | 225 | 358 | 272 | 404 | 1.98e-24 | 105 |
Msa0999810 | AT3G01085.2 | 40.299 | 134 | 79 | 1 | 225 | 358 | 272 | 404 | 1.98e-24 | 105 |
Msa0999810 | AT5G45430.1 | 39.535 | 129 | 77 | 1 | 226 | 354 | 156 | 283 | 2.24e-24 | 104 |
Msa0999810 | AT5G45430.2 | 39.535 | 129 | 77 | 1 | 226 | 354 | 156 | 283 | 2.39e-24 | 104 |
Msa0999810 | AT1G71530.1 | 36.913 | 149 | 91 | 3 | 225 | 372 | 304 | 450 | 3.65e-24 | 104 |
Msa0999810 | AT1G09600.1 | 39.568 | 139 | 74 | 4 | 225 | 359 | 320 | 452 | 3.94e-24 | 104 |
Msa0999810 | AT2G18170.1 | 28.532 | 361 | 204 | 11 | 11 | 364 | 23 | 336 | 4.28e-24 | 102 |
Msa0999810 | AT1G71530.2 | 36.913 | 149 | 91 | 3 | 225 | 372 | 304 | 450 | 8.08e-24 | 102 |
Msa0999810 | AT5G63370.7 | 37.415 | 147 | 74 | 4 | 226 | 360 | 459 | 599 | 1.65e-23 | 102 |
Msa0999810 | AT5G63370.8 | 37.415 | 147 | 74 | 4 | 226 | 360 | 459 | 599 | 1.65e-23 | 102 |
Msa0999810 | AT5G63370.4 | 37.415 | 147 | 74 | 4 | 226 | 360 | 459 | 599 | 1.65e-23 | 102 |
Msa0999810 | AT5G63370.6 | 37.415 | 147 | 74 | 4 | 226 | 360 | 459 | 599 | 1.65e-23 | 102 |
Msa0999810 | AT5G63370.1 | 37.415 | 147 | 74 | 4 | 226 | 360 | 459 | 599 | 1.65e-23 | 102 |
Msa0999810 | AT5G63370.2 | 37.762 | 143 | 79 | 4 | 226 | 360 | 325 | 465 | 1.98e-23 | 101 |
Msa0999810 | AT5G63370.3 | 37.762 | 143 | 79 | 4 | 226 | 360 | 325 | 465 | 1.98e-23 | 101 |
Msa0999810 | AT5G50860.2 | 36.250 | 160 | 91 | 5 | 218 | 372 | 264 | 417 | 2.25e-23 | 101 |
Msa0999810 | AT4G36450.1 | 27.083 | 384 | 197 | 12 | 11 | 374 | 23 | 343 | 3.56e-23 | 99.8 |
Msa0999810 | AT5G50860.1 | 36.250 | 160 | 91 | 5 | 218 | 372 | 264 | 417 | 3.63e-23 | 101 |
Msa0999810 | AT1G33770.1 | 39.474 | 152 | 89 | 3 | 222 | 372 | 295 | 444 | 7.81e-23 | 100 |
Msa0999810 | AT3G45640.1 | 35.211 | 142 | 74 | 2 | 224 | 356 | 194 | 326 | 1.62e-22 | 98.2 |
Msa0999810 | AT1G01560.2 | 35.443 | 158 | 78 | 3 | 224 | 366 | 196 | 344 | 1.81e-22 | 97.8 |
Msa0999810 | AT2G38620.4 | 36.434 | 129 | 79 | 2 | 226 | 354 | 116 | 241 | 1.81e-22 | 95.5 |
Msa0999810 | AT2G38620.4 | 38.462 | 104 | 55 | 3 | 19 | 113 | 3 | 106 | 1.36e-12 | 67.4 |
Msa0999810 | AT1G18670.2 | 38.971 | 136 | 81 | 2 | 225 | 359 | 289 | 423 | 2.84e-22 | 99.0 |
Msa0999810 | AT5G39420.1 | 39.552 | 134 | 79 | 2 | 225 | 358 | 262 | 393 | 2.85e-22 | 99.0 |
Msa0999810 | AT1G18670.3 | 38.971 | 136 | 81 | 2 | 225 | 359 | 289 | 423 | 3.04e-22 | 99.0 |
Msa0999810 | AT1G18670.1 | 38.971 | 136 | 81 | 2 | 225 | 359 | 289 | 423 | 3.09e-22 | 99.0 |
Msa0999810 | AT3G54180.1 | 38.095 | 126 | 75 | 2 | 229 | 354 | 179 | 301 | 3.76e-22 | 95.9 |
Msa0999810 | AT3G59790.1 | 34.752 | 141 | 75 | 2 | 223 | 355 | 215 | 346 | 4.87e-22 | 97.1 |
Msa0999810 | AT2G38620.2 | 36.434 | 129 | 79 | 2 | 226 | 354 | 178 | 303 | 6.41e-22 | 95.5 |
Msa0999810 | AT5G63610.1 | 36.986 | 146 | 78 | 4 | 228 | 360 | 195 | 339 | 7.55e-22 | 97.1 |
Msa0999810 | AT4G01370.1 | 35.948 | 153 | 74 | 3 | 224 | 361 | 199 | 342 | 1.18e-21 | 95.5 |
Msa0999810 | AT5G14640.1 | 38.462 | 130 | 78 | 1 | 227 | 356 | 233 | 360 | 1.45e-21 | 95.9 |
Msa0999810 | AT5G14640.2 | 38.462 | 130 | 78 | 1 | 227 | 356 | 233 | 360 | 1.45e-21 | 95.9 |
Msa0999810 | AT4G22940.2 | 36.364 | 154 | 85 | 4 | 225 | 372 | 261 | 407 | 2.07e-21 | 96.3 |
Msa0999810 | AT5G19010.1 | 37.086 | 151 | 86 | 3 | 224 | 366 | 185 | 334 | 2.67e-21 | 95.9 |
Msa0999810 | AT4G22940.1 | 36.364 | 154 | 85 | 4 | 225 | 372 | 261 | 407 | 2.99e-21 | 95.1 |
Msa0999810 | AT1G53050.2 | 36.424 | 151 | 89 | 4 | 225 | 372 | 291 | 437 | 3.88e-21 | 95.5 |
Msa0999810 | AT1G53050.1 | 36.424 | 151 | 89 | 4 | 225 | 372 | 291 | 437 | 3.88e-21 | 95.5 |
Msa0999810 | AT5G44290.2 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 4.18e-21 | 95.5 |
Msa0999810 | AT5G44290.5 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 4.18e-21 | 95.5 |
Msa0999810 | AT5G44290.4 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 4.18e-21 | 95.5 |
Msa0999810 | AT5G44290.1 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 4.18e-21 | 95.5 |
Msa0999810 | AT5G44290.3 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 4.18e-21 | 95.5 |
Msa0999810 | AT5G44290.6 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 5.50e-21 | 95.1 |
Msa0999810 | AT4G11330.1 | 34.752 | 141 | 74 | 2 | 224 | 355 | 199 | 330 | 5.82e-21 | 93.6 |
Msa0999810 | AT1G57700.1 | 38.298 | 141 | 75 | 3 | 225 | 360 | 303 | 436 | 6.73e-21 | 95.1 |
Msa0999810 | AT5G44290.7 | 37.956 | 137 | 79 | 3 | 225 | 359 | 294 | 426 | 7.21e-21 | 94.4 |
Msa0999810 | AT1G06390.2 | 36.923 | 130 | 80 | 1 | 227 | 356 | 229 | 356 | 8.53e-21 | 93.6 |
Msa0999810 | AT1G06390.1 | 36.923 | 130 | 80 | 1 | 227 | 356 | 229 | 356 | 8.53e-21 | 93.6 |
Msa0999810 | AT1G54610.1 | 35.294 | 136 | 82 | 2 | 225 | 358 | 275 | 406 | 8.90e-21 | 94.4 |
Msa0999810 | AT1G54610.3 | 35.294 | 136 | 82 | 2 | 225 | 358 | 275 | 406 | 8.90e-21 | 94.4 |
Msa0999810 | AT1G54610.2 | 35.294 | 136 | 82 | 2 | 225 | 358 | 275 | 406 | 8.90e-21 | 94.4 |
Msa0999810 | AT5G26751.1 | 37.692 | 130 | 79 | 1 | 227 | 356 | 228 | 355 | 9.24e-21 | 93.6 |
Msa0999810 | AT3G14720.1 | 28.493 | 365 | 190 | 13 | 19 | 366 | 24 | 334 | 9.50e-21 | 94.4 |
Msa0999810 | AT4G13020.4 | 37.879 | 132 | 77 | 3 | 226 | 355 | 156 | 284 | 9.50e-21 | 93.2 |
Msa0999810 | AT4G13020.1 | 37.879 | 132 | 77 | 3 | 226 | 355 | 156 | 284 | 9.86e-21 | 93.6 |
Msa0999810 | AT4G13020.7 | 37.879 | 132 | 77 | 3 | 226 | 355 | 156 | 284 | 1.05e-20 | 92.8 |
Msa0999810 | AT4G18710.1 | 25.797 | 345 | 202 | 10 | 14 | 356 | 34 | 326 | 1.07e-20 | 92.8 |
Msa0999810 | AT4G13020.5 | 37.879 | 132 | 77 | 3 | 226 | 355 | 165 | 293 | 1.07e-20 | 93.6 |
Msa0999810 | AT1G01560.3 | 36.641 | 131 | 65 | 2 | 224 | 345 | 196 | 317 | 1.09e-20 | 92.4 |
Msa0999810 | AT4G13020.8 | 37.879 | 132 | 77 | 3 | 226 | 355 | 165 | 293 | 1.14e-20 | 92.8 |
Msa0999810 | AT4G13020.6 | 37.879 | 132 | 77 | 3 | 226 | 355 | 156 | 284 | 1.20e-20 | 92.8 |
Msa0999810 | AT3G14720.2 | 28.493 | 365 | 190 | 13 | 19 | 366 | 24 | 334 | 1.37e-20 | 93.2 |
Msa0999810 | AT3G14720.3 | 28.493 | 365 | 190 | 13 | 19 | 366 | 24 | 334 | 1.37e-20 | 93.2 |
Msa0999810 | AT2G30980.1 | 36.923 | 130 | 80 | 1 | 227 | 356 | 231 | 358 | 1.50e-20 | 92.8 |
Msa0999810 | AT4G13020.2 | 37.879 | 132 | 77 | 3 | 226 | 355 | 164 | 292 | 1.57e-20 | 93.2 |
Msa0999810 | AT4G13020.3 | 37.879 | 132 | 77 | 3 | 226 | 355 | 164 | 292 | 1.58e-20 | 93.2 |
Msa0999810 | AT5G63370.9 | 46.341 | 82 | 43 | 1 | 226 | 307 | 325 | 405 | 1.75e-20 | 92.8 |
Msa0999810 | AT2G46070.1 | 34.752 | 141 | 74 | 2 | 224 | 355 | 197 | 328 | 1.77e-20 | 92.0 |
Msa0999810 | AT5G63370.5 | 46.341 | 82 | 43 | 1 | 226 | 307 | 459 | 539 | 2.02e-20 | 93.2 |
Msa0999810 | AT5G63370.10 | 46.341 | 82 | 43 | 1 | 226 | 307 | 459 | 539 | 2.02e-20 | 93.2 |
Msa0999810 | AT3G05840.2 | 37.692 | 130 | 79 | 1 | 227 | 356 | 232 | 359 | 2.06e-20 | 92.4 |
Msa0999810 | AT3G05840.1 | 37.692 | 130 | 79 | 1 | 227 | 356 | 232 | 359 | 2.06e-20 | 92.4 |
Msa0999810 | AT2G01450.3 | 35.762 | 151 | 88 | 3 | 224 | 366 | 176 | 325 | 2.43e-20 | 92.8 |
Msa0999810 | AT2G01450.1 | 35.762 | 151 | 88 | 3 | 224 | 366 | 176 | 325 | 2.43e-20 | 92.8 |
Msa0999810 | AT2G01450.2 | 35.762 | 151 | 88 | 3 | 224 | 366 | 176 | 325 | 2.43e-20 | 92.8 |
Msa0999810 | AT2G01450.4 | 35.762 | 151 | 88 | 3 | 224 | 366 | 176 | 325 | 2.43e-20 | 92.8 |
Msa0999810 | AT1G73670.1 | 36.601 | 153 | 84 | 5 | 224 | 366 | 250 | 399 | 2.43e-20 | 93.2 |
Msa0999810 | AT2G46070.3 | 34.752 | 141 | 74 | 2 | 224 | 355 | 231 | 362 | 2.75e-20 | 92.0 |
Msa0999810 | AT1G03740.1 | 35.556 | 135 | 85 | 2 | 225 | 359 | 370 | 502 | 2.99e-20 | 93.2 |
Msa0999810 | AT1G03740.2 | 35.556 | 135 | 85 | 2 | 225 | 359 | 370 | 502 | 3.11e-20 | 92.8 |
Msa0999810 | AT4G00720.1 | 38.281 | 128 | 77 | 1 | 227 | 354 | 297 | 422 | 4.36e-20 | 92.0 |
Msa0999810 | AT1G57870.1 | 36.154 | 130 | 81 | 1 | 227 | 356 | 241 | 368 | 8.38e-20 | 90.9 |
Msa0999810 | AT1G57870.4 | 36.154 | 130 | 81 | 1 | 227 | 356 | 241 | 368 | 8.38e-20 | 90.9 |
Msa0999810 | AT1G57870.2 | 36.154 | 130 | 81 | 1 | 227 | 356 | 241 | 368 | 8.38e-20 | 90.9 |
Msa0999810 | AT1G57870.3 | 36.154 | 130 | 81 | 1 | 227 | 356 | 241 | 368 | 1.19e-19 | 90.5 |
Msa0999810 | AT1G53510.1 | 28.653 | 349 | 180 | 14 | 19 | 354 | 24 | 316 | 1.51e-19 | 90.9 |
Msa0999810 | AT2G43790.1 | 35.000 | 140 | 74 | 2 | 224 | 355 | 219 | 349 | 3.18e-19 | 89.0 |
Msa0999810 | AT2G46070.2 | 34.074 | 135 | 71 | 2 | 224 | 349 | 197 | 322 | 7.31e-19 | 87.0 |
Msa0999810 | AT1G09840.11 | 35.115 | 131 | 83 | 1 | 226 | 356 | 114 | 242 | 8.13e-19 | 86.3 |
Msa0999810 | AT1G71530.3 | 35.938 | 128 | 80 | 2 | 225 | 352 | 304 | 429 | 8.75e-19 | 87.8 |
Msa0999810 | AT3G61160.1 | 35.156 | 128 | 81 | 1 | 227 | 354 | 261 | 386 | 9.02e-19 | 87.8 |
Msa0999810 | AT3G61160.2 | 35.156 | 128 | 81 | 1 | 227 | 354 | 268 | 393 | 9.90e-19 | 87.8 |
Msa0999810 | AT3G61160.4 | 35.156 | 128 | 81 | 1 | 227 | 354 | 261 | 386 | 1.24e-18 | 87.4 |
Msa0999810 | AT1G09840.3 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.7 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.10 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.6 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.4 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.1 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.9 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.5 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.8 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT1G09840.2 | 35.115 | 131 | 83 | 1 | 226 | 356 | 241 | 369 | 1.45e-18 | 87.0 |
Msa0999810 | AT3G61160.5 | 35.833 | 120 | 75 | 1 | 227 | 346 | 261 | 378 | 4.19e-18 | 85.5 |
Msa0999810 | AT1G07880.2 | 32.484 | 157 | 81 | 4 | 224 | 364 | 189 | 336 | 4.93e-18 | 85.1 |
Msa0999810 | AT1G18150.3 | 36.424 | 151 | 87 | 3 | 224 | 366 | 264 | 413 | 2.88e-17 | 84.0 |
Msa0999810 | AT1G18150.2 | 36.424 | 151 | 87 | 3 | 224 | 366 | 264 | 413 | 2.88e-17 | 84.0 |
Msa0999810 | AT1G18150.1 | 36.424 | 151 | 87 | 3 | 224 | 366 | 264 | 413 | 2.88e-17 | 84.0 |
Msa0999810 | AT2G42880.1 | 38.562 | 153 | 81 | 5 | 224 | 366 | 185 | 334 | 3.53e-17 | 83.6 |
Msa0999810 | AT4G18710.2 | 26.812 | 276 | 150 | 9 | 14 | 287 | 28 | 253 | 4.13e-17 | 80.9 |
Msa0999810 | AT2G42880.2 | 36.424 | 151 | 87 | 3 | 224 | 366 | 185 | 334 | 4.71e-17 | 82.8 |
Msa0999810 | AT3G05050.3 | 35.036 | 137 | 86 | 2 | 225 | 359 | 295 | 430 | 1.95e-16 | 81.3 |
Msa0999810 | AT3G05050.2 | 35.036 | 137 | 86 | 2 | 225 | 359 | 295 | 430 | 1.95e-16 | 81.3 |
Msa0999810 | AT3G05050.1 | 35.036 | 137 | 86 | 2 | 225 | 359 | 295 | 430 | 1.95e-16 | 81.3 |
Msa0999810 | AT3G18040.2 | 36.424 | 151 | 87 | 3 | 224 | 366 | 95 | 244 | 1.99e-16 | 80.9 |
Msa0999810 | AT3G18040.4 | 36.424 | 151 | 87 | 3 | 224 | 366 | 292 | 441 | 2.17e-16 | 81.3 |
Msa0999810 | AT3G18040.1 | 36.424 | 151 | 87 | 3 | 224 | 366 | 183 | 332 | 2.66e-16 | 80.9 |
Msa0999810 | AT3G18040.5 | 36.424 | 151 | 87 | 3 | 224 | 366 | 178 | 327 | 3.13e-16 | 80.5 |
Msa0999810 | AT3G18040.3 | 36.424 | 151 | 87 | 3 | 224 | 366 | 292 | 441 | 3.52e-16 | 80.5 |
Msa0999810 | AT3G61160.3 | 40.000 | 85 | 49 | 1 | 227 | 311 | 261 | 343 | 9.18e-16 | 78.2 |
Msa0999810 | AT3G61160.6 | 40.000 | 85 | 49 | 1 | 227 | 311 | 268 | 350 | 1.08e-15 | 78.2 |
Msa0999810 | AT1G01560.4 | 47.541 | 61 | 32 | 0 | 224 | 284 | 196 | 256 | 1.57e-13 | 70.9 |
Msa0999810 | AT1G01560.1 | 47.541 | 61 | 32 | 0 | 224 | 284 | 196 | 256 | 1.57e-13 | 70.9 |
Msa0999810 | AT2G23070.1 | 32.847 | 137 | 77 | 3 | 229 | 354 | 285 | 417 | 8.87e-13 | 69.7 |
Msa0999810 | AT1G07880.1 | 47.541 | 61 | 32 | 0 | 224 | 284 | 189 | 249 | 1.12e-12 | 67.8 |
Msa0999810 | AT2G38620.3 | 46.296 | 54 | 29 | 0 | 229 | 282 | 181 | 234 | 1.30e-12 | 67.8 |
Msa0999810 | AT2G38620.1 | 46.296 | 54 | 29 | 0 | 229 | 282 | 181 | 234 | 1.30e-12 | 67.8 |
Msa0999810 | AT1G71530.4 | 56.863 | 51 | 22 | 0 | 225 | 275 | 304 | 354 | 1.93e-12 | 68.2 |
Find 103 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTCTTGGTTTCGGAAAA+TGG | 0.152157 | 6_4:+82271644 | Msa0999810:CDS |
ATTTATGATCCCTGTGAAAT+TGG | 0.178062 | 6_4:+82274765 | Msa0999810:three_prime_UTR |
CTTTATGGGTCAACAAATTA+TGG | 0.193721 | 6_4:+82274232 | Msa0999810:CDS |
ACTTCATCTTGCAAACAATT+TGG | 0.216115 | 6_4:-82274475 | None:intergenic |
GAGTATTTGGTTGTGATTTC+CGG | 0.220290 | 6_4:-82271271 | None:intergenic |
AGGGCTCCTGAACTACTTTA+TGG | 0.236937 | 6_4:+82274217 | Msa0999810:CDS |
GAGATTGATCTTTGGTCATT+AGG | 0.259357 | 6_4:+82274259 | Msa0999810:CDS |
CACCGCTTTACGCATTCTTC+GGG | 0.264886 | 6_4:+82271414 | Msa0999810:CDS |
TGGTTGATGCAGATTGTTAA+TGG | 0.273011 | 6_4:+82271569 | Msa0999810:intron |
GCCGGAGAATTTCTTGGTTT+CGG | 0.287094 | 6_4:+82271637 | Msa0999810:CDS |
CTTTCTTCATTTGCTTCATA+TGG | 0.287657 | 6_4:-82274142 | None:intergenic |
TGTTGGAACTAGATGGTTTA+GGG | 0.306890 | 6_4:+82274198 | Msa0999810:CDS |
GTGTTGGAACTAGATGGTTT+AGG | 0.313304 | 6_4:+82274197 | Msa0999810:CDS |
GGTTGATGCAGATTGTTAAT+GGG | 0.323354 | 6_4:+82271570 | Msa0999810:intron |
ACATCAAAGCCTTTGTTTCC+TGG | 0.327343 | 6_4:+82274304 | Msa0999810:CDS |
GTGGGTGAGGATGGAGTATT+TGG | 0.334245 | 6_4:-82271284 | None:intergenic |
TATACAAAGATAGTGAATTC+AGG | 0.338488 | 6_4:+82274933 | Msa0999810:three_prime_UTR |
GCTAAGGTGGAAAACCCTAT+TGG | 0.344938 | 6_4:+82274436 | Msa0999810:CDS |
GCCGCAGTGGCTCTCCTAGC+TGG | 0.345576 | 6_4:-82274529 | None:intergenic |
TTTGAAGCCGGAGAATTTCT+TGG | 0.347755 | 6_4:+82271631 | Msa0999810:CDS |
GTTGACCCATAAAGTAGTTC+AGG | 0.350444 | 6_4:-82274223 | None:intergenic |
CATCATGTGTTGGAACTAGA+TGG | 0.354874 | 6_4:+82274191 | Msa0999810:CDS |
GGGCTCCTGAACTACTTTAT+GGG | 0.365723 | 6_4:+82274218 | Msa0999810:CDS |
TGGATGCTCCAACTCTTTGT+TGG | 0.367306 | 6_4:-82271241 | None:intergenic |
AAAGAAATTCTTGCATAATC+AGG | 0.371254 | 6_4:-82274412 | None:intergenic |
ATTTCTTGGTTTCGGAAAAT+GGG | 0.371775 | 6_4:+82271645 | Msa0999810:CDS |
TCACCGCTTTACGCATTCTT+CGG | 0.373878 | 6_4:+82271413 | Msa0999810:CDS |
ATGGTTTAGAGATTGATCTT+TGG | 0.374560 | 6_4:+82274251 | Msa0999810:CDS |
ATGGGGTTTATGATTGTCAT+AGG | 0.377152 | 6_4:+82271588 | Msa0999810:CDS |
ATGCATGCTTCAAGACCAAT+AGG | 0.378873 | 6_4:-82274451 | None:intergenic |
TGGTTTGTATTGTCAGATAA+GGG | 0.395003 | 6_4:-82273923 | None:intergenic |
TTGTGATTTCCGGTCGGGTT+TGG | 0.418750 | 6_4:-82271261 | None:intergenic |
AAGCCTTTGTTTCCTGGTAC+AGG | 0.425521 | 6_4:+82274310 | Msa0999810:CDS |
TTGGTTTGTATTGTCAGATA+AGG | 0.427332 | 6_4:-82273924 | None:intergenic |
ATGCTCCAACTCTTTGTTGG+AGG | 0.429536 | 6_4:-82271238 | None:intergenic |
CACATATGACACTGATGATA+AGG | 0.431871 | 6_4:+82274033 | Msa0999810:CDS |
GGAACTCTTAGATGAGTAAT+GGG | 0.435747 | 6_4:-82274598 | None:intergenic |
TTTATGATTGTCATAGGAAT+GGG | 0.437642 | 6_4:+82271594 | Msa0999810:CDS |
TCTGACAATACAAACCAAAC+TGG | 0.438332 | 6_4:+82273929 | Msa0999810:CDS |
TCCGAAACCAAGAAATTCTC+CGG | 0.442699 | 6_4:-82271638 | None:intergenic |
CTTAGATGAGTAATGGGAAC+AGG | 0.448906 | 6_4:-82274592 | None:intergenic |
GGATTTGATGCAACAAATCA+TGG | 0.450441 | 6_4:+82273869 | Msa0999810:CDS |
TTTGCAAGATGAAGTTTCCT+TGG | 0.464230 | 6_4:+82274483 | Msa0999810:CDS |
GTTTATGATTGTCATAGGAA+TGG | 0.466642 | 6_4:+82271593 | Msa0999810:CDS |
TTTGGTTGTGATTTCCGGTC+GGG | 0.471301 | 6_4:-82271266 | None:intergenic |
CATATGAAGCAAATGAAGAA+AGG | 0.477457 | 6_4:+82274143 | Msa0999810:CDS |
GAATAACATCATGAGGATGC+TGG | 0.482469 | 6_4:-82273901 | None:intergenic |
TGTTATTTGCGTGTTTCCAT+TGG | 0.484836 | 6_4:+82274982 | Msa0999810:three_prime_UTR |
AGTAGGTGCCGGAGCCGATG+TGG | 0.498965 | 6_4:-82271303 | None:intergenic |
TGAGTAATGGGAACAGGAAG+TGG | 0.509556 | 6_4:-82274586 | None:intergenic |
TGGATTTCTTTCAACGCGAC+GGG | 0.510732 | 6_4:-82271364 | None:intergenic |
TGATTTCACGTGATGCTGAT+TGG | 0.514067 | 6_4:-82271393 | None:intergenic |
ATACAAAGATAGTGAATTCA+GGG | 0.514459 | 6_4:+82274934 | Msa0999810:three_prime_UTR |
ATATGAAGCAAATGAAGAAA+GGG | 0.519675 | 6_4:+82274144 | Msa0999810:CDS |
AGGAACTCTTAGATGAGTAA+TGG | 0.519966 | 6_4:-82274599 | None:intergenic |
GCGACGACGACGATGATGCT+TGG | 0.521649 | 6_4:+82274107 | Msa0999810:CDS |
GTAATCTCGATGAGGAAGCT+TGG | 0.529739 | 6_4:+82274371 | Msa0999810:CDS |
GGAGCCGATGTGGGTGAGGA+TGG | 0.532075 | 6_4:-82271293 | None:intergenic |
ATCCTCACCCACATCGGCTC+CGG | 0.532249 | 6_4:+82271295 | Msa0999810:CDS |
GTTGATGCAGATTGTTAATG+GGG | 0.532595 | 6_4:+82271571 | Msa0999810:intron |
TGCCGGAGCCGATGTGGGTG+AGG | 0.533356 | 6_4:-82271297 | None:intergenic |
GTTTCATTGTAGCAAATGAA+AGG | 0.546863 | 6_4:+82274660 | Msa0999810:three_prime_UTR |
TGGATCCTCCAACAAAGAGT+TGG | 0.549349 | 6_4:+82271233 | Msa0999810:CDS |
CGGGTGTTCCGTCGGAGAGA+CGG | 0.549398 | 6_4:-82271345 | None:intergenic |
CGCTAGTTGTGCATGTTGCG+CGG | 0.553701 | 6_4:-82274087 | None:intergenic |
AATAACATCATGAGGATGCT+GGG | 0.554911 | 6_4:-82273900 | None:intergenic |
TGCTTTGTTATGATCCAGCT+AGG | 0.557729 | 6_4:+82274515 | Msa0999810:CDS |
TCCAGCAAATAAAATACCAA+TGG | 0.560046 | 6_4:-82274998 | None:intergenic |
ATTTGGTTGTGATTTCCGGT+CGG | 0.561724 | 6_4:-82271267 | None:intergenic |
TGCATGCTTCAAGACCAATA+GGG | 0.568665 | 6_4:-82274450 | None:intergenic |
GTGGATTTCTTTCAACGCGA+CGG | 0.570456 | 6_4:-82271365 | None:intergenic |
GTAGACGTCGGAGTAGGTGC+CGG | 0.570945 | 6_4:-82271314 | None:intergenic |
CTCGATGAGGAAGCTTGGAA+TGG | 0.573471 | 6_4:+82274376 | Msa0999810:CDS |
TTTCTTGGTTTCGGAAAATG+GGG | 0.574931 | 6_4:+82271646 | Msa0999810:CDS |
AGCGGCCGCCGTCTCTCCGA+CGG | 0.575632 | 6_4:+82271337 | Msa0999810:CDS |
CAACGCGACGGGTGTTCCGT+CGG | 0.576143 | 6_4:-82271353 | None:intergenic |
TGTTCATAGAGATTTGAAGC+CGG | 0.577519 | 6_4:+82271619 | Msa0999810:CDS |
ATACGAAAATCAAGAGGAGG+AGG | 0.579848 | 6_4:+82273952 | Msa0999810:CDS |
TTGGAGCATCCAAACCCGAC+CGG | 0.580571 | 6_4:+82271252 | Msa0999810:CDS |
TGATCAATATCACCTGTACC+AGG | 0.582493 | 6_4:-82274322 | None:intergenic |
GGTTTCCTCACATCATGTGT+TGG | 0.585452 | 6_4:+82274181 | Msa0999810:CDS |
GTAGGTGCCGGAGCCGATGT+GGG | 0.589364 | 6_4:-82271302 | None:intergenic |
TACTCCATCCTCACCCACAT+CGG | 0.591271 | 6_4:+82271289 | Msa0999810:CDS |
TCTTCGGGGCTCCGAAAACG+TGG | 0.595403 | 6_4:+82271429 | Msa0999810:CDS |
TACAAAGATAGTGAATTCAG+GGG | 0.603744 | 6_4:+82274935 | Msa0999810:three_prime_UTR |
GTTGTTACCGTCATGCGTGT+TGG | 0.606758 | 6_4:-82274059 | None:intergenic |
GCCGCTGTAGACGTCGGAGT+AGG | 0.606816 | 6_4:-82271320 | None:intergenic |
GATAAGGGAATAACATCATG+AGG | 0.613593 | 6_4:-82273908 | None:intergenic |
AGCTAGGAGAGCCACTGCGG+CGG | 0.621246 | 6_4:+82274531 | Msa0999810:CDS |
ACCGCTTTACGCATTCTTCG+GGG | 0.632838 | 6_4:+82271415 | Msa0999810:CDS |
GTGATGCTGATTGGTGATCG+TGG | 0.635850 | 6_4:-82271384 | None:intergenic |
TCACCTGTACCAGGAAACAA+AGG | 0.636623 | 6_4:-82274313 | None:intergenic |
AAGGACACCAACACGCATGA+CGG | 0.646451 | 6_4:+82274052 | Msa0999810:CDS |
GCCCCGAAGAATGCGTAAAG+CGG | 0.647385 | 6_4:-82271416 | None:intergenic |
ATGAAGTAACTCCGCCGCAG+TGG | 0.648098 | 6_4:-82274542 | None:intergenic |
AACTGGATACGAAAATCAAG+AGG | 0.653498 | 6_4:+82273946 | Msa0999810:CDS |
TGGATACGAAAATCAAGAGG+AGG | 0.654611 | 6_4:+82273949 | Msa0999810:CDS |
TAGTTCCAACACATGATGTG+AGG | 0.669668 | 6_4:-82274186 | None:intergenic |
ACCTACTCCGACGTCTACAG+CGG | 0.673944 | 6_4:+82271319 | Msa0999810:CDS |
GTGTTCCGTCGGAGAGACGG+CGG | 0.680771 | 6_4:-82271342 | None:intergenic |
TCCAGCTAGGAGAGCCACTG+CGG | 0.692760 | 6_4:+82274528 | Msa0999810:CDS |
ACGGCGGCCGCTGTAGACGT+CGG | 0.694858 | 6_4:-82271326 | None:intergenic |
ACAAAGATAGTGAATTCAGG+GGG | 0.702178 | 6_4:+82274936 | Msa0999810:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATGTTTTGTTTTATC+CGG | + | chr6_4:82271736-82271755 | Msa0999810:intron | 15.0% |
!! | TTTATTAACTACAAATTACT+TGG | + | chr6_4:82272166-82272185 | Msa0999810:intron | 15.0% |
!! | ATTTAAAAAAATAGAGTTCA+TGG | - | chr6_4:82274734-82274753 | None:intergenic | 15.0% |
!!! | AAATTGGAAAAAATTGATTT+TGG | + | chr6_4:82274781-82274800 | Msa0999810:three_prime_UTR | 15.0% |
!!! | AAAAATTGTTATTTTAGTCT+GGG | + | chr6_4:82274840-82274859 | Msa0999810:three_prime_UTR | 15.0% |
!! | TTTATTAACTACAAATCACT+TGG | + | chr6_4:82272010-82272029 | Msa0999810:intron | 20.0% |
!! | TTTATTAACTACAAATCACT+TGG | + | chr6_4:82272010-82272029 | Msa0999810:intron | 20.0% |
!!! | TTGTTTTATGCTTATTTTCA+AGG | + | chr6_4:82272928-82272947 | Msa0999810:intron | 20.0% |
!!! | AAACTTCTAAAAATCACAAT+GGG | - | chr6_4:82273609-82273628 | None:intergenic | 20.0% |
!! | AAGTTTCAATGTATAATTTC+TGG | + | chr6_4:82273623-82273642 | Msa0999810:intron | 20.0% |
!!! | GAAAAATTGTTATTTTAGTC+TGG | + | chr6_4:82274839-82274858 | Msa0999810:three_prime_UTR | 20.0% |
!!! | AAAATTGTTATTTTAGTCTG+GGG | + | chr6_4:82274841-82274860 | Msa0999810:three_prime_UTR | 20.0% |
! | TTTATGATTGTCATAGGAAT+GGG | + | chr6_4:82271594-82271613 | Msa0999810:CDS | 25.0% |
!!! | GTTTTGAAAATTGCTGATTT+TGG | + | chr6_4:82271668-82271687 | Msa0999810:CDS | 25.0% |
!!! | ACTAAGAATTGTTTTAGTCT+AGG | + | chr6_4:82271801-82271820 | Msa0999810:intron | 25.0% |
!! | TTTAGTCTAGGATTTGAATT+CGG | + | chr6_4:82271813-82271832 | Msa0999810:intron | 25.0% |
!! | TTTAATGAGTGTGTGTTTTT+CGG | + | chr6_4:82271877-82271896 | Msa0999810:intron | 25.0% |
!!! | GATTAAGAATAGTTTTAGTC+AGG | + | chr6_4:82271944-82271963 | Msa0999810:intron | 25.0% |
! | ACAAATCATTCGAAAAAATC+CGG | - | chr6_4:82272134-82272153 | None:intergenic | 25.0% |
!!! | GATTAAGAATAGTTTTAGTC+AGG | + | chr6_4:82271944-82271963 | Msa0999810:intron | 25.0% |
! | AATAGTTAGTTGTTATAGTC+AGG | + | chr6_4:82272100-82272119 | Msa0999810:intron | 25.0% |
! | CAAATCATTCGAAAAAAACT+CGG | - | chr6_4:82272618-82272637 | None:intergenic | 25.0% |
!! | TCAATGACTTGATTTTATGT+AGG | + | chr6_4:82272669-82272688 | Msa0999810:intron | 25.0% |
!! | TTTCAACATATGATAGTGTA+TGG | - | chr6_4:82273371-82273390 | None:intergenic | 25.0% |
!!! | AGAAATGATGTTTTTGTGTT+TGG | + | chr6_4:82273544-82273563 | Msa0999810:intron | 25.0% |
!! | GAAACTTCTAAAAATCACAA+TGG | - | chr6_4:82273610-82273629 | None:intergenic | 25.0% |
! | GAAAACACTAAAATCATTGT+GGG | - | chr6_4:82273662-82273681 | None:intergenic | 25.0% |
! | AAAAACATTCATAGTAGATC+AGG | - | chr6_4:82273808-82273827 | None:intergenic | 25.0% |
! | ATATGAAGCAAATGAAGAAA+GGG | + | chr6_4:82274144-82274163 | Msa0999810:CDS | 25.0% |
! | AAAGAAATTCTTGCATAATC+AGG | - | chr6_4:82274415-82274434 | None:intergenic | 25.0% |
!!! | CAATTTTTTCCAATTTCACA+GGG | - | chr6_4:82274777-82274796 | None:intergenic | 25.0% |
!!! | TCAATTTTTTCCAATTTCAC+AGG | - | chr6_4:82274778-82274797 | None:intergenic | 25.0% |
!!! | ATTGATTTTGGTCTTAACAA+AGG | + | chr6_4:82274793-82274812 | Msa0999810:three_prime_UTR | 25.0% |
!!! | CTTAACAAAGGTTTTTTTGT+TGG | + | chr6_4:82274805-82274824 | Msa0999810:three_prime_UTR | 25.0% |
!!! | AAATTGTTATTTTAGTCTGG+GGG | + | chr6_4:82274842-82274861 | Msa0999810:three_prime_UTR | 25.0% |
!!! | ATCAAGTTTTGACAATTTAC+AGG | + | chr6_4:82274885-82274904 | Msa0999810:three_prime_UTR | 25.0% |
!!! | TCAAGTTTTGACAATTTACA+GGG | + | chr6_4:82274886-82274905 | Msa0999810:three_prime_UTR | 25.0% |
! | TATACAAAGATAGTGAATTC+AGG | + | chr6_4:82274933-82274952 | Msa0999810:three_prime_UTR | 25.0% |
! | ATACAAAGATAGTGAATTCA+GGG | + | chr6_4:82274934-82274953 | Msa0999810:three_prime_UTR | 25.0% |
GTTTATGATTGTCATAGGAA+TGG | + | chr6_4:82271593-82271612 | Msa0999810:CDS | 30.0% | |
AATTTCTTGGTTTCGGAAAA+TGG | + | chr6_4:82271644-82271663 | Msa0999810:CDS | 30.0% | |
ATTTCTTGGTTTCGGAAAAT+GGG | + | chr6_4:82271645-82271664 | Msa0999810:CDS | 30.0% | |
! | TTAGTCTAGGATTTGAATTC+GGG | + | chr6_4:82271814-82271833 | Msa0999810:intron | 30.0% |
! | TTTTAGTCAGGATTTGAATC+CGG | + | chr6_4:82271956-82271975 | Msa0999810:intron | 30.0% |
! | GCAAATCATTCTAAAAAACC+CGG | - | chr6_4:82271978-82271997 | None:intergenic | 30.0% |
!!! | GGTTTTTTAGAATGATTTGC+CGG | + | chr6_4:82271978-82271997 | Msa0999810:intron | 30.0% |
AGTTAATAAACTTCACTCAC+CGG | - | chr6_4:82272000-82272019 | None:intergenic | 30.0% | |
TTATAGTCAAGATTTGAACC+CGG | + | chr6_4:82272112-82272131 | Msa0999810:intron | 30.0% | |
CAAATCATTCGAAAAAATCC+GGG | - | chr6_4:82272133-82272152 | None:intergenic | 30.0% | |
CAAATCATTCGAAAAAACTC+AGG | - | chr6_4:82272296-82272315 | None:intergenic | 30.0% | |
!!! | ATGAGTTTTTTTTCGAACTC+TGG | + | chr6_4:82272364-82272383 | Msa0999810:intron | 30.0% |
! | TTTTAGTCAGGAATTGAACT+CGG | + | chr6_4:82272434-82272453 | Msa0999810:intron | 30.0% |
! | TAACTGAATGACGCAATTTT+AGG | + | chr6_4:82272809-82272828 | Msa0999810:intron | 30.0% |
GAGAACTTATGAAAACAGTT+AGG | + | chr6_4:82272892-82272911 | Msa0999810:intron | 30.0% | |
! | TGTTTTCATAAGCTATCTTG+GGG | - | chr6_4:82272956-82272975 | None:intergenic | 30.0% |
! | CTGTTTTCATAAGCTATCTT+GGG | - | chr6_4:82272957-82272976 | None:intergenic | 30.0% |
! | ACTGTTTTCATAAGCTATCT+TGG | - | chr6_4:82272958-82272977 | None:intergenic | 30.0% |
! | TACACAGGCAAATTCTAAAA+CGG | - | chr6_4:82273167-82273186 | None:intergenic | 30.0% |
! | TCATGGATTATTGCAATTTG+TGG | + | chr6_4:82273203-82273222 | Msa0999810:intron | 30.0% |
ACTAAAATTGCAACATTCAG+TGG | - | chr6_4:82273243-82273262 | None:intergenic | 30.0% | |
!! | TTGCAATTTTAGTGCATGTT+TGG | + | chr6_4:82273250-82273269 | Msa0999810:intron | 30.0% |
CTATGATTTCTCCAAATTCA+CGG | + | chr6_4:82273336-82273355 | Msa0999810:intron | 30.0% | |
! | AACATATGATAGTGTATGGT+TGG | - | chr6_4:82273367-82273386 | None:intergenic | 30.0% |
! | TGATCGTTCTCTTAAAGTTT+TGG | + | chr6_4:82273461-82273480 | Msa0999810:intron | 30.0% |
! | GATCGTTCTCTTAAAGTTTT+GGG | + | chr6_4:82273462-82273481 | Msa0999810:intron | 30.0% |
AAAATCATTGTGGGAAATCA+CGG | - | chr6_4:82273653-82273672 | None:intergenic | 30.0% | |
GGAAAACACTAAAATCATTG+TGG | - | chr6_4:82273663-82273682 | None:intergenic | 30.0% | |
ATGCTGTATCATAGTAAGTA+AGG | + | chr6_4:82273689-82273708 | Msa0999810:intron | 30.0% | |
!! | TTTACTTTTGACGCATTCTA+AGG | + | chr6_4:82273753-82273772 | Msa0999810:intron | 30.0% |
!!! | AGGTGATTCTTTGTTTTTAG+AGG | + | chr6_4:82273773-82273792 | Msa0999810:intron | 30.0% |
!!! | GGTGATTCTTTGTTTTTAGA+GGG | + | chr6_4:82273774-82273793 | Msa0999810:intron | 30.0% |
!!! | TTCTTTGTTTTTAGAGGGAT+TGG | + | chr6_4:82273779-82273798 | Msa0999810:intron | 30.0% |
TTTATTTGATTACTCCTCTC+AGG | + | chr6_4:82273826-82273845 | Msa0999810:intron | 30.0% | |
! | TGGTTTGTATTGTCAGATAA+GGG | - | chr6_4:82273926-82273945 | None:intergenic | 30.0% |
!! | TTGGTTTGTATTGTCAGATA+AGG | - | chr6_4:82273927-82273946 | None:intergenic | 30.0% |
CTTTCTTCATTTGCTTCATA+TGG | - | chr6_4:82274145-82274164 | None:intergenic | 30.0% | |
CATATGAAGCAAATGAAGAA+AGG | + | chr6_4:82274143-82274162 | Msa0999810:CDS | 30.0% | |
CTTTATGGGTCAACAAATTA+TGG | + | chr6_4:82274232-82274251 | Msa0999810:CDS | 30.0% | |
ATGGTTTAGAGATTGATCTT+TGG | + | chr6_4:82274251-82274270 | Msa0999810:CDS | 30.0% | |
! | AGTAGAATCATTAGCGTTTT+CGG | + | chr6_4:82274349-82274368 | Msa0999810:CDS | 30.0% |
! | TGCAAGAATTTCTTTTGCTA+AGG | + | chr6_4:82274420-82274439 | Msa0999810:CDS | 30.0% |
! | AAGAATTTCTTTTGCTAAGG+TGG | + | chr6_4:82274423-82274442 | Msa0999810:CDS | 30.0% |
ACTTCATCTTGCAAACAATT+TGG | - | chr6_4:82274478-82274497 | None:intergenic | 30.0% | |
!!! | AAGACTAGGATTTTTCAAGT+GGG | + | chr6_4:82274638-82274657 | Msa0999810:exon | 30.0% |
GTTTCATTGTAGCAAATGAA+AGG | + | chr6_4:82274660-82274679 | Msa0999810:three_prime_UTR | 30.0% | |
! | GGATTGTGATTCTAATTTTG+AGG | + | chr6_4:82274681-82274700 | Msa0999810:three_prime_UTR | 30.0% |
ATTTATGATCCCTGTGAAAT+TGG | + | chr6_4:82274765-82274784 | Msa0999810:three_prime_UTR | 30.0% | |
TACAAAGATAGTGAATTCAG+GGG | + | chr6_4:82274935-82274954 | Msa0999810:three_prime_UTR | 30.0% | |
!! | TCCATTGGTATTTTATTTGC+TGG | + | chr6_4:82274997-82275016 | Msa0999810:three_prime_UTR | 30.0% |
TCCAGCAAATAAAATACCAA+TGG | - | chr6_4:82275001-82275020 | None:intergenic | 30.0% | |
GAGTATTTGGTTGTGATTTC+CGG | - | chr6_4:82271274-82271293 | None:intergenic | 35.0% | |
GTTTGATGCATGAATTCTTC+TGG | + | chr6_4:82271451-82271470 | Msa0999810:intron | 35.0% | |
! | TGGTTGATGCAGATTGTTAA+TGG | + | chr6_4:82271569-82271588 | Msa0999810:intron | 35.0% |
! | GGTTGATGCAGATTGTTAAT+GGG | + | chr6_4:82271570-82271589 | Msa0999810:intron | 35.0% |
GTTGATGCAGATTGTTAATG+GGG | + | chr6_4:82271571-82271590 | Msa0999810:intron | 35.0% | |
ATGGGGTTTATGATTGTCAT+AGG | + | chr6_4:82271588-82271607 | Msa0999810:CDS | 35.0% | |
! | TGTTCATAGAGATTTGAAGC+CGG | + | chr6_4:82271619-82271638 | Msa0999810:CDS | 35.0% |
TTTCTTGGTTTCGGAAAATG+GGG | + | chr6_4:82271646-82271665 | Msa0999810:CDS | 35.0% | |
!!! | GAAAATTGCTGATTTTGGAC+AGG | + | chr6_4:82271673-82271692 | Msa0999810:CDS | 35.0% |
!!! | TGTTTTGTTTTATCCGGTTC+TGG | + | chr6_4:82271742-82271761 | Msa0999810:intron | 35.0% |
! | TTTATCCGGTTCTGGTAATT+CGG | + | chr6_4:82271750-82271769 | Msa0999810:intron | 35.0% |
TTTAGTCAGGATTTGAATCC+GGG | + | chr6_4:82271957-82271976 | Msa0999810:intron | 35.0% | |
!! | GGTTTTATGAGTGTGTTTCT+CGG | + | chr6_4:82272031-82272050 | Msa0999810:intron | 35.0% |
! | GTTTTATGAGTGTGTTTCTC+GGG | + | chr6_4:82272032-82272051 | Msa0999810:intron | 35.0% |
!! | GGTTTTATGAGTGTGTTTCT+CGG | + | chr6_4:82272031-82272050 | Msa0999810:intron | 35.0% |
! | GTTTTATGAGTGTGTTTCTC+GGG | + | chr6_4:82272032-82272051 | Msa0999810:intron | 35.0% |
!! | TTTTTCGAACTCTGGTAATC+CGG | + | chr6_4:82272372-82272391 | Msa0999810:intron | 35.0% |
TTTAGTCAGGAATTGAACTC+GGG | + | chr6_4:82272435-82272454 | Msa0999810:intron | 35.0% | |
!! | GGTTTTATGAGTGTGTTTCT+CGG | + | chr6_4:82272031-82272050 | Msa0999810:intron | 35.0% |
! | GTTTTATGAGTGTGTTTCTC+GGG | + | chr6_4:82272032-82272051 | Msa0999810:intron | 35.0% |
! | TTGTTTGCAATTTGCTTGTG+TGG | + | chr6_4:82272733-82272752 | Msa0999810:intron | 35.0% |
!! | CATGGATTATTGCAGTTTTG+TGG | + | chr6_4:82272772-82272791 | Msa0999810:intron | 35.0% |
!!! | GACGCAATTTTAGGATGTTT+AGG | + | chr6_4:82272818-82272837 | Msa0999810:intron | 35.0% |
CTTAACATGATTAGCGCTTA+TGG | + | chr6_4:82273053-82273072 | Msa0999810:intron | 35.0% | |
TTTGCCTGTGTAATGTGATT+TGG | + | chr6_4:82273175-82273194 | Msa0999810:intron | 35.0% | |
TTGCCTGTGTAATGTGATTT+GGG | + | chr6_4:82273176-82273195 | Msa0999810:intron | 35.0% | |
TAACCCAAATCACATTACAC+AGG | - | chr6_4:82273182-82273201 | None:intergenic | 35.0% | |
!! | AATGTGATTTGGGTTAGTCA+TGG | + | chr6_4:82273186-82273205 | Msa0999810:intron | 35.0% |
! | GTTTGGATTCACTTTGAGTT+TGG | + | chr6_4:82273267-82273286 | Msa0999810:intron | 35.0% |
!!! | TTGTTGTTTGGGTCTCTTTT+TGG | + | chr6_4:82273492-82273511 | Msa0999810:intron | 35.0% |
TTTGGTACAGATTCACATTC+TGG | + | chr6_4:82273510-82273529 | Msa0999810:intron | 35.0% | |
ACTATGATACAGCATGTGTT+TGG | - | chr6_4:82273684-82273703 | None:intergenic | 35.0% | |
AAGGATTGCATATAGCTCTT+TGG | + | chr6_4:82273708-82273727 | Msa0999810:intron | 35.0% | |
AGGATTGCATATAGCTCTTT+GGG | + | chr6_4:82273709-82273728 | Msa0999810:intron | 35.0% | |
GGATTTGATGCAACAAATCA+TGG | + | chr6_4:82273869-82273888 | Msa0999810:CDS | 35.0% | |
AATAACATCATGAGGATGCT+GGG | - | chr6_4:82273903-82273922 | None:intergenic | 35.0% | |
GATAAGGGAATAACATCATG+AGG | - | chr6_4:82273911-82273930 | None:intergenic | 35.0% | |
TCTGACAATACAAACCAAAC+TGG | + | chr6_4:82273929-82273948 | Msa0999810:CDS | 35.0% | |
! | CTTGATTTTCGTATCCAGTT+TGG | - | chr6_4:82273946-82273965 | None:intergenic | 35.0% |
AACTGGATACGAAAATCAAG+AGG | + | chr6_4:82273946-82273965 | Msa0999810:CDS | 35.0% | |
CACATATGACACTGATGATA+AGG | + | chr6_4:82274033-82274052 | Msa0999810:CDS | 35.0% | |
GAAAGGGATGAAAAACTAGA+TGG | + | chr6_4:82274160-82274179 | Msa0999810:CDS | 35.0% | |
TGTTGGAACTAGATGGTTTA+GGG | + | chr6_4:82274198-82274217 | Msa0999810:CDS | 35.0% | |
GAGATTGATCTTTGGTCATT+AGG | + | chr6_4:82274259-82274278 | Msa0999810:CDS | 35.0% | |
TTTGCAAGATGAAGTTTCCT+TGG | + | chr6_4:82274483-82274502 | Msa0999810:CDS | 35.0% | |
! | ACAAAGCAATCTTTTGACCA+AGG | - | chr6_4:82274503-82274522 | None:intergenic | 35.0% |
GGAACTCTTAGATGAGTAAT+GGG | - | chr6_4:82274601-82274620 | None:intergenic | 35.0% | |
AGGAACTCTTAGATGAGTAA+TGG | - | chr6_4:82274602-82274621 | None:intergenic | 35.0% | |
AGAGTTCCTTCAACCAAAAA+TGG | + | chr6_4:82274613-82274632 | Msa0999810:CDS | 35.0% | |
!!! | TCTTGTCCATTTTTGGTTGA+AGG | - | chr6_4:82274622-82274641 | None:intergenic | 35.0% |
AACCAAAAATGGACAAGACT+AGG | + | chr6_4:82274624-82274643 | Msa0999810:CDS | 35.0% | |
!!! | ATCCTAGTCTTGTCCATTTT+TGG | - | chr6_4:82274629-82274648 | None:intergenic | 35.0% |
!!! | CAAGACTAGGATTTTTCAAG+TGG | + | chr6_4:82274637-82274656 | Msa0999810:exon | 35.0% |
ACAAAGATAGTGAATTCAGG+GGG | + | chr6_4:82274936-82274955 | Msa0999810:three_prime_UTR | 35.0% | |
! | TGTTATTTGCGTGTTTCCAT+TGG | + | chr6_4:82274982-82275001 | Msa0999810:three_prime_UTR | 35.0% |
ATTTGGTTGTGATTTCCGGT+CGG | - | chr6_4:82271270-82271289 | None:intergenic | 40.0% | |
TGATTTCACGTGATGCTGAT+TGG | - | chr6_4:82271396-82271415 | None:intergenic | 40.0% | |
! | CATGCATCAAACCACGTTTT+CGG | - | chr6_4:82271443-82271462 | None:intergenic | 40.0% |
TGATGCATGAATTCTTCTGG+AGG | + | chr6_4:82271454-82271473 | Msa0999810:intron | 40.0% | |
GATGCATGAATTCTTCTGGA+GGG | + | chr6_4:82271455-82271474 | Msa0999810:intron | 40.0% | |
TGATCGTTGTTGAGTTTCTG+AGG | + | chr6_4:82271493-82271512 | Msa0999810:intron | 40.0% | |
! | TTTGAAGCCGGAGAATTTCT+TGG | + | chr6_4:82271631-82271650 | Msa0999810:CDS | 40.0% |
TCCGAAACCAAGAAATTCTC+CGG | - | chr6_4:82271641-82271660 | None:intergenic | 40.0% | |
!!! | TGCTGATTTTGGACAGGTTT+TGG | + | chr6_4:82271679-82271698 | Msa0999810:intron | 40.0% |
TAACTCCGAATTACCAGAAC+CGG | - | chr6_4:82271758-82271777 | None:intergenic | 40.0% | |
TAATTCGGAGTTAGGTCAGT+CGG | + | chr6_4:82271765-82271784 | Msa0999810:intron | 40.0% | |
TGGTAATCCAAACTAAGGTC+AGG | + | chr6_4:82272058-82272077 | Msa0999810:intron | 40.0% | |
TAATCCAAACTAAGGTCAGG+AGG | + | chr6_4:82272061-82272080 | Msa0999810:intron | 40.0% | |
TGGTAATCCAAACTAAGGTC+AGG | + | chr6_4:82272058-82272077 | Msa0999810:intron | 40.0% | |
TAATCCAAACTAAGGTCAGG+AGG | + | chr6_4:82272061-82272080 | Msa0999810:intron | 40.0% | |
! | TGGTAATCCAGTCTAAGGTA+GGG | + | chr6_4:82272542-82272561 | Msa0999810:intron | 40.0% |
! | TAGGTGTTTGCTAGATTGTC+AGG | + | chr6_4:82272688-82272707 | Msa0999810:intron | 40.0% |
!!! | GGTGTGGTTTGTTTTGTTCA+TGG | + | chr6_4:82272754-82272773 | Msa0999810:intron | 40.0% |
!! | ACATGCACTAGGGTCATTTT+TGG | - | chr6_4:82273105-82273124 | None:intergenic | 40.0% |
AAATGACCCTAGTGCATGTT+TGG | + | chr6_4:82273106-82273125 | Msa0999810:intron | 40.0% | |
!!! | CGTTCTCTTAAAGTTTTGGG+CGG | + | chr6_4:82273465-82273484 | Msa0999810:intron | 40.0% |
! | TTTTGTGTTTGGTTGAGCGA+TGG | + | chr6_4:82273555-82273574 | Msa0999810:intron | 40.0% |
TTTGTGTTTGGTTGAGCGAT+GGG | + | chr6_4:82273556-82273575 | Msa0999810:intron | 40.0% | |
ATGGGAGAACTCTAAACTCA+TGG | - | chr6_4:82273591-82273610 | None:intergenic | 40.0% | |
GGATTGCATATAGCTCTTTG+GGG | + | chr6_4:82273710-82273729 | Msa0999810:intron | 40.0% | |
!!! | GCAAGGATACTTTTGAAGTC+TGG | + | chr6_4:82273848-82273867 | Msa0999810:CDS | 40.0% |
GAATAACATCATGAGGATGC+TGG | - | chr6_4:82273904-82273923 | None:intergenic | 40.0% | |
TGGATACGAAAATCAAGAGG+AGG | + | chr6_4:82273949-82273968 | Msa0999810:CDS | 40.0% | |
ATACGAAAATCAAGAGGAGG+AGG | + | chr6_4:82273952-82273971 | Msa0999810:CDS | 40.0% | |
TAGTTCCAACACATGATGTG+AGG | - | chr6_4:82274189-82274208 | None:intergenic | 40.0% | |
CATCATGTGTTGGAACTAGA+TGG | + | chr6_4:82274191-82274210 | Msa0999810:CDS | 40.0% | |
GTGTTGGAACTAGATGGTTT+AGG | + | chr6_4:82274197-82274216 | Msa0999810:CDS | 40.0% | |
GTTGACCCATAAAGTAGTTC+AGG | - | chr6_4:82274226-82274245 | None:intergenic | 40.0% | |
! | ACATCAAAGCCTTTGTTTCC+TGG | + | chr6_4:82274304-82274323 | Msa0999810:CDS | 40.0% |
TGATCAATATCACCTGTACC+AGG | - | chr6_4:82274325-82274344 | None:intergenic | 40.0% | |
TGCATGCTTCAAGACCAATA+GGG | - | chr6_4:82274453-82274472 | None:intergenic | 40.0% | |
ATGCATGCTTCAAGACCAAT+AGG | - | chr6_4:82274454-82274473 | None:intergenic | 40.0% | |
! | TGCTTTGTTATGATCCAGCT+AGG | + | chr6_4:82274515-82274534 | Msa0999810:CDS | 40.0% |
! | CTTAGATGAGTAATGGGAAC+AGG | - | chr6_4:82274595-82274614 | None:intergenic | 40.0% |
TGGATCCTCCAACAAAGAGT+TGG | + | chr6_4:82271233-82271252 | Msa0999810:CDS | 45.0% | |
ATGCTCCAACTCTTTGTTGG+AGG | - | chr6_4:82271241-82271260 | None:intergenic | 45.0% | |
TGGATGCTCCAACTCTTTGT+TGG | - | chr6_4:82271244-82271263 | None:intergenic | 45.0% | |
TTTGGTTGTGATTTCCGGTC+GGG | - | chr6_4:82271269-82271288 | None:intergenic | 45.0% | |
TGGATTTCTTTCAACGCGAC+GGG | - | chr6_4:82271367-82271386 | None:intergenic | 45.0% | |
GTGGATTTCTTTCAACGCGA+CGG | - | chr6_4:82271368-82271387 | None:intergenic | 45.0% | |
TCACCGCTTTACGCATTCTT+CGG | + | chr6_4:82271413-82271432 | Msa0999810:CDS | 45.0% | |
! | TGAGTTTCTGAGGAGTGATC+TGG | + | chr6_4:82271503-82271522 | Msa0999810:intron | 45.0% |
! | GAGTTTCTGAGGAGTGATCT+GGG | + | chr6_4:82271504-82271523 | Msa0999810:intron | 45.0% |
! | TCTGTGATCAGAGATGGGTT+TGG | + | chr6_4:82271527-82271546 | Msa0999810:intron | 45.0% |
!! | TTTGGTGGTGGTGAAGTGAA+AGG | + | chr6_4:82271545-82271564 | Msa0999810:intron | 45.0% |
!! | TTGGTGGTGGTGAAGTGAAA+GGG | + | chr6_4:82271546-82271565 | Msa0999810:intron | 45.0% |
GCCGGAGAATTTCTTGGTTT+CGG | + | chr6_4:82271637-82271656 | Msa0999810:CDS | 45.0% | |
! | GGTTCTGGTAATTCGGAGTT+AGG | + | chr6_4:82271757-82271776 | Msa0999810:intron | 45.0% |
! | GGCTCTGGTAATCCAAACTA+AGG | + | chr6_4:82272053-82272072 | Msa0999810:intron | 45.0% |
CTTACCTCCTGACCTTAGTT+TGG | - | chr6_4:82272068-82272087 | None:intergenic | 45.0% | |
TGAGTGTGTTTCTCGGGATT+TGG | + | chr6_4:82272194-82272213 | Msa0999810:intron | 45.0% | |
GAGTGTGTTTCTCGGGATTT+GGG | + | chr6_4:82272195-82272214 | Msa0999810:intron | 45.0% | |
! | GGCTCTGGTAATCCAAACTA+AGG | + | chr6_4:82272053-82272072 | Msa0999810:intron | 45.0% |
CTTACCTCCTGACCTTAGTT+TGG | - | chr6_4:82272068-82272087 | None:intergenic | 45.0% | |
! | CTGGTAATCCAGTCTAAGGT+AGG | + | chr6_4:82272541-82272560 | Msa0999810:intron | 45.0% |
! | TAATCCAGTCTAAGGTAGGG+AGG | + | chr6_4:82272545-82272564 | Msa0999810:intron | 45.0% |
! | TGCAATTTGCTTGTGTGGTG+TGG | + | chr6_4:82272738-82272757 | Msa0999810:intron | 45.0% |
GTTTGGAGGGACATTGAGTT+TGG | + | chr6_4:82273123-82273142 | Msa0999810:intron | 45.0% | |
GGTTGGATTCACCGTGAATT+TGG | - | chr6_4:82273350-82273369 | None:intergenic | 45.0% | |
!! | TTGGGCGGAGATTTGTTGTT+TGG | + | chr6_4:82273480-82273499 | Msa0999810:intron | 45.0% |
!! | TGGGCGGAGATTTGTTGTTT+GGG | + | chr6_4:82273481-82273500 | Msa0999810:intron | 45.0% |
GGAGAACTCTAAACTCATGG+TGG | - | chr6_4:82273588-82273607 | None:intergenic | 45.0% | |
ATCATTGTGGGAAATCACGG+TGG | - | chr6_4:82273650-82273669 | None:intergenic | 45.0% | |
TTGATTACTCCTCTCAGGCA+AGG | + | chr6_4:82273831-82273850 | Msa0999810:intron | 45.0% | |
!! | CAAAAGTATCCTTGCCTGAG+AGG | - | chr6_4:82273843-82273862 | None:intergenic | 45.0% |
GGTTTCCTCACATCATGTGT+TGG | + | chr6_4:82274181-82274200 | Msa0999810:CDS | 45.0% | |
AGGGCTCCTGAACTACTTTA+TGG | + | chr6_4:82274217-82274236 | Msa0999810:CDS | 45.0% | |
GGGCTCCTGAACTACTTTAT+GGG | + | chr6_4:82274218-82274237 | Msa0999810:CDS | 45.0% | |
! | AAGCCTTTGTTTCCTGGTAC+AGG | + | chr6_4:82274310-82274329 | Msa0999810:CDS | 45.0% |
TCACCTGTACCAGGAAACAA+AGG | - | chr6_4:82274316-82274335 | None:intergenic | 45.0% | |
! | CGTTTTCGGTAATCTCGATG+AGG | + | chr6_4:82274363-82274382 | Msa0999810:CDS | 45.0% |
GTAATCTCGATGAGGAAGCT+TGG | + | chr6_4:82274371-82274390 | Msa0999810:CDS | 45.0% | |
GCTAAGGTGGAAAACCCTAT+TGG | + | chr6_4:82274436-82274455 | Msa0999810:CDS | 45.0% | |
! | TGAGTAATGGGAACAGGAAG+TGG | - | chr6_4:82274589-82274608 | None:intergenic | 45.0% |
!! | TTCAGGGGGCATTATGTTCA+TGG | + | chr6_4:82274950-82274969 | Msa0999810:three_prime_UTR | 45.0% |
TTGTGATTTCCGGTCGGGTT+TGG | - | chr6_4:82271264-82271283 | None:intergenic | 50.0% | |
! | GTGGGTGAGGATGGAGTATT+TGG | - | chr6_4:82271287-82271306 | None:intergenic | 50.0% |
TACTCCATCCTCACCCACAT+CGG | + | chr6_4:82271289-82271308 | Msa0999810:CDS | 50.0% | |
! | GTGATGCTGATTGGTGATCG+TGG | - | chr6_4:82271387-82271406 | None:intergenic | 50.0% |
CACCGCTTTACGCATTCTTC+GGG | + | chr6_4:82271414-82271433 | Msa0999810:CDS | 50.0% | |
ACCGCTTTACGCATTCTTCG+GGG | + | chr6_4:82271415-82271434 | Msa0999810:CDS | 50.0% | |
! | GCATGAATTCTTCTGGAGGG+AGG | + | chr6_4:82271458-82271477 | Msa0999810:intron | 50.0% |
! | TGAATTCTTCTGGAGGGAGG+AGG | + | chr6_4:82271461-82271480 | Msa0999810:intron | 50.0% |
TCTGGGTCTGTGATCAGAGA+TGG | + | chr6_4:82271521-82271540 | Msa0999810:intron | 50.0% | |
CTGGGTCTGTGATCAGAGAT+GGG | + | chr6_4:82271522-82271541 | Msa0999810:intron | 50.0% | |
! | GTGATCAGAGATGGGTTTGG+TGG | + | chr6_4:82271530-82271549 | Msa0999810:intron | 50.0% |
!! | ATCAGAGATGGGTTTGGTGG+TGG | + | chr6_4:82271533-82271552 | Msa0999810:intron | 50.0% |
TTCGGACTCTCTCTTGTGTC+CGG | + | chr6_4:82271895-82271914 | Msa0999810:intron | 50.0% | |
CTTATCTCCCAAGCCAACTC+CGG | - | chr6_4:82271917-82271936 | None:intergenic | 50.0% | |
GAACTCTGGTAATCCGGAGT+TGG | + | chr6_4:82272378-82272397 | Msa0999810:intron | 50.0% | |
! | TGGTAATCCGGAGTTGGCTT+GGG | + | chr6_4:82272384-82272403 | Msa0999810:intron | 50.0% |
TGAGTGTGTTTCTCGGGCTA+TGG | + | chr6_4:82272515-82272534 | Msa0999810:intron | 50.0% | |
GAGTGTGTTTCTCGGGCTAT+GGG | + | chr6_4:82272516-82272535 | Msa0999810:intron | 50.0% | |
! | GGCTCTGGTAATCCAGTCTA+AGG | + | chr6_4:82272537-82272556 | Msa0999810:intron | 50.0% |
CTTACCTCCCTACCTTAGAC+TGG | - | chr6_4:82272552-82272571 | None:intergenic | 50.0% | |
TGACCCTAGTGCATGTTTGG+AGG | + | chr6_4:82273109-82273128 | Msa0999810:intron | 50.0% | |
GACCCTAGTGCATGTTTGGA+GGG | + | chr6_4:82273110-82273129 | Msa0999810:intron | 50.0% | |
GTCCCTCCAAACATGCACTA+GGG | - | chr6_4:82273115-82273134 | None:intergenic | 50.0% | |
TGTCCCTCCAAACATGCACT+AGG | - | chr6_4:82273116-82273135 | None:intergenic | 50.0% | |
AAGGACACCAACACGCATGA+CGG | + | chr6_4:82274052-82274071 | Msa0999810:CDS | 50.0% | |
GTTGTTACCGTCATGCGTGT+TGG | - | chr6_4:82274062-82274081 | None:intergenic | 50.0% | |
CTCGATGAGGAAGCTTGGAA+TGG | + | chr6_4:82274376-82274395 | Msa0999810:CDS | 50.0% | |
! | TTGGAGCATCCAAACCCGAC+CGG | + | chr6_4:82271252-82271271 | Msa0999810:CDS | 55.0% |
ACCTACTCCGACGTCTACAG+CGG | + | chr6_4:82271319-82271338 | Msa0999810:CDS | 55.0% | |
GCCCCGAAGAATGCGTAAAG+CGG | - | chr6_4:82271419-82271438 | None:intergenic | 55.0% | |
! | GTGGTGGTGAAGTGAAAGGG+TGG | + | chr6_4:82271549-82271568 | Msa0999810:intron | 55.0% |
CTCTCTCTTGTGTCCGGAGT+TGG | + | chr6_4:82271901-82271920 | Msa0999810:intron | 55.0% | |
TCTTGTGTCCGGAGTTGGCT+TGG | + | chr6_4:82271906-82271925 | Msa0999810:intron | 55.0% | |
! | CTTGTGTCCGGAGTTGGCTT+GGG | + | chr6_4:82271907-82271926 | Msa0999810:intron | 55.0% |
TGAGTGTGTTTCTCGGGCTC+TGG | + | chr6_4:82272038-82272057 | Msa0999810:intron | 55.0% | |
GTTTCTCGGGATTTGGGCTC+TGG | + | chr6_4:82272201-82272220 | Msa0999810:intron | 55.0% | |
CTGGTAATCCGGAGTTGGCT+TGG | + | chr6_4:82272383-82272402 | Msa0999810:intron | 55.0% | |
CTTAGCTCCCAAGCCAACTC+CGG | - | chr6_4:82272394-82272413 | None:intergenic | 55.0% | |
CGCTAGTTGTGCATGTTGCG+CGG | - | chr6_4:82274090-82274109 | None:intergenic | 55.0% | |
ATGAAGTAACTCCGCCGCAG+TGG | - | chr6_4:82274545-82274564 | None:intergenic | 55.0% | |
!! | ATCCTCACCCACATCGGCTC+CGG | + | chr6_4:82271295-82271314 | Msa0999810:CDS | 60.0% |
GTAGACGTCGGAGTAGGTGC+CGG | - | chr6_4:82271317-82271336 | None:intergenic | 60.0% | |
TCTTCGGGGCTCCGAAAACG+TGG | + | chr6_4:82271429-82271448 | Msa0999810:CDS | 60.0% | |
GTTTCTCGGGCTATGGGCTC+TGG | + | chr6_4:82272522-82272541 | Msa0999810:intron | 60.0% | |
GCGACGACGACGATGATGCT+TGG | + | chr6_4:82274107-82274126 | Msa0999810:CDS | 60.0% | |
TCCAGCTAGGAGAGCCACTG+CGG | + | chr6_4:82274528-82274547 | Msa0999810:CDS | 60.0% | |
GGAGCCGATGTGGGTGAGGA+TGG | - | chr6_4:82271296-82271315 | None:intergenic | 65.0% | |
!! | GTAGGTGCCGGAGCCGATGT+GGG | - | chr6_4:82271305-82271324 | None:intergenic | 65.0% |
!! | AGTAGGTGCCGGAGCCGATG+TGG | - | chr6_4:82271306-82271325 | None:intergenic | 65.0% |
GCCGCTGTAGACGTCGGAGT+AGG | - | chr6_4:82271323-82271342 | None:intergenic | 65.0% | |
GTGTTCCGTCGGAGAGACGG+CGG | - | chr6_4:82271345-82271364 | None:intergenic | 65.0% | |
CGGGTGTTCCGTCGGAGAGA+CGG | - | chr6_4:82271348-82271367 | None:intergenic | 65.0% | |
CAACGCGACGGGTGTTCCGT+CGG | - | chr6_4:82271356-82271375 | None:intergenic | 65.0% | |
AGCTAGGAGAGCCACTGCGG+CGG | + | chr6_4:82274531-82274550 | Msa0999810:CDS | 65.0% | |
TGCCGGAGCCGATGTGGGTG+AGG | - | chr6_4:82271300-82271319 | None:intergenic | 70.0% | |
ACGGCGGCCGCTGTAGACGT+CGG | - | chr6_4:82271329-82271348 | None:intergenic | 70.0% | |
GCCGCAGTGGCTCTCCTAGC+TGG | - | chr6_4:82274532-82274551 | None:intergenic | 70.0% | |
AGCGGCCGCCGTCTCTCCGA+CGG | + | chr6_4:82271337-82271356 | Msa0999810:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 82271232 | 82275022 | 82271232 | ID=Msa0999810;Name=Msa0999810 |
chr6_4 | mRNA | 82271232 | 82275022 | 82271232 | ID=Msa0999810-mRNA-1;Parent=Msa0999810;Name=Msa0999810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0.33|1|1|1|3|377|376 |
chr6_4 | exon | 82271232 | 82271450 | 82271232 | ID=Msa0999810-mRNA-1:exon:15754;Parent=Msa0999810-mRNA-1 |
chr6_4 | exon | 82271581 | 82271694 | 82271581 | ID=Msa0999810-mRNA-1:exon:15755;Parent=Msa0999810-mRNA-1 |
chr6_4 | exon | 82273848 | 82275022 | 82273848 | ID=Msa0999810-mRNA-1:exon:15756;Parent=Msa0999810-mRNA-1 |
chr6_4 | CDS | 82271232 | 82271450 | 82271232 | ID=Msa0999810-mRNA-1:cds;Parent=Msa0999810-mRNA-1 |
chr6_4 | CDS | 82271581 | 82271694 | 82271581 | ID=Msa0999810-mRNA-1:cds;Parent=Msa0999810-mRNA-1 |
chr6_4 | CDS | 82273848 | 82274645 | 82273848 | ID=Msa0999810-mRNA-1:cds;Parent=Msa0999810-mRNA-1 |
chr6_4 | three_prime_UTR | 82274646 | 82275022 | 82274646 | ID=Msa0999810-mRNA-1:three_prime_utr;Parent=Msa0999810-mRNA-1 |
Gene Sequence |
Protein sequence |