Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999930 | XP_039682605.1 | 98.616 | 289 | 4 | 0 | 40 | 328 | 1 | 289 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999930 | sp|Q9SKD0|BPC1_ARATH | 51.827 | 301 | 115 | 10 | 40 | 328 | 1 | 283 | 2.34e-93 | 282 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999930 | A0A396HIF8 | 98.616 | 289 | 4 | 0 | 40 | 328 | 1 | 289 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0999930 | TF | BBR-BPC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999930 | MtrunA17_Chr6g0479911 | 98.616 | 289 | 4 | 0 | 40 | 328 | 1 | 289 | 0.0 | 594 |
| Msa0999930 | MtrunA17_Chr8g0375531 | 52.234 | 291 | 121 | 10 | 43 | 328 | 3 | 280 | 2.93e-82 | 250 |
| Msa0999930 | MtrunA17_Chr1g0156031 | 55.263 | 114 | 51 | 0 | 215 | 328 | 227 | 340 | 2.77e-45 | 157 |
| Msa0999930 | MtrunA17_Chr8g0385961 | 52.336 | 107 | 51 | 0 | 222 | 328 | 206 | 312 | 3.18e-43 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999930 | AT2G01930.2 | 51.827 | 301 | 115 | 10 | 40 | 328 | 1 | 283 | 2.38e-94 | 282 |
| Msa0999930 | AT2G01930.1 | 51.827 | 301 | 115 | 10 | 40 | 328 | 1 | 283 | 2.38e-94 | 282 |
| Msa0999930 | AT1G14685.1 | 50.508 | 295 | 124 | 8 | 40 | 328 | 1 | 279 | 7.49e-87 | 263 |
| Msa0999930 | AT1G14685.4 | 50.508 | 295 | 124 | 8 | 40 | 328 | 1 | 279 | 7.49e-87 | 263 |
| Msa0999930 | AT1G14685.3 | 50.508 | 295 | 124 | 8 | 40 | 328 | 1 | 279 | 7.49e-87 | 263 |
| Msa0999930 | AT1G14685.2 | 50.508 | 295 | 124 | 8 | 40 | 328 | 1 | 279 | 7.49e-87 | 263 |
| Msa0999930 | AT1G68120.1 | 46.959 | 296 | 118 | 11 | 43 | 328 | 3 | 269 | 6.53e-77 | 237 |
| Msa0999930 | AT2G35550.2 | 54.422 | 147 | 65 | 2 | 182 | 328 | 82 | 226 | 3.29e-49 | 164 |
| Msa0999930 | AT2G35550.4 | 54.422 | 147 | 65 | 2 | 182 | 328 | 82 | 226 | 3.29e-49 | 164 |
| Msa0999930 | AT2G35550.3 | 54.422 | 147 | 65 | 2 | 182 | 328 | 82 | 226 | 3.29e-49 | 164 |
| Msa0999930 | AT2G35550.1 | 54.422 | 147 | 65 | 2 | 182 | 328 | 127 | 271 | 4.42e-49 | 165 |
| Msa0999930 | AT2G21240.1 | 32.453 | 265 | 164 | 5 | 67 | 328 | 44 | 296 | 1.24e-43 | 152 |
| Msa0999930 | AT2G21240.2 | 32.453 | 265 | 164 | 5 | 67 | 328 | 44 | 296 | 1.24e-43 | 152 |
| Msa0999930 | AT5G42520.3 | 56.075 | 107 | 46 | 1 | 223 | 328 | 176 | 282 | 1.14e-41 | 146 |
| Msa0999930 | AT5G42520.2 | 56.075 | 107 | 46 | 1 | 223 | 328 | 232 | 338 | 1.70e-41 | 147 |
| Msa0999930 | AT5G42520.1 | 56.075 | 107 | 46 | 1 | 223 | 328 | 236 | 342 | 1.92e-41 | 147 |
| Msa0999930 | AT4G38910.1 | 44.203 | 138 | 76 | 1 | 191 | 328 | 122 | 258 | 2.49e-41 | 145 |
| Msa0999930 | AT4G38910.2 | 44.203 | 138 | 76 | 1 | 191 | 328 | 147 | 283 | 3.34e-41 | 145 |
Find 103 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACAAATGTTTCTGCTTC+TGG | 0.182183 | 6_4:+82503132 | None:intergenic |
| GCATATCACCATAGGGAAAT+TGG | 0.193266 | 6_4:-82502685 | Msa0999930:CDS |
| CGATAGATTTGAGGACTTAT+TGG | 0.234611 | 6_4:-82502036 | Msa0999930:CDS |
| TGCAATTAACGGGATTGATT+TGG | 0.279573 | 6_4:-82502293 | Msa0999930:CDS |
| GATAGATTTGAGGACTTATT+GGG | 0.312732 | 6_4:-82502035 | Msa0999930:CDS |
| ACCAGTTCCATTCACCTTCT+CGG | 0.313515 | 6_4:+82502450 | None:intergenic |
| CGCCTCAACAATGTTATAGA+TGG | 0.329251 | 6_4:-82502228 | Msa0999930:CDS |
| TTCATAATTTAGTGTTGTAA+TGG | 0.360008 | 6_4:-82502863 | Msa0999930:intron |
| ATGGACTTAACATAAGCAAT+TGG | 0.360767 | 6_4:-82502831 | Msa0999930:CDS |
| CAACAAATGTTTCTGCTTCT+GGG | 0.375246 | 6_4:+82503133 | None:intergenic |
| CCGGAAAAGCCGCCTTTGAT+TGG | 0.380482 | 6_4:-82502745 | Msa0999930:CDS |
| CTACTGAAATTGCAATTAAC+GGG | 0.396699 | 6_4:-82502303 | Msa0999930:CDS |
| TTTCTAATCCGATAGATTTG+AGG | 0.399273 | 6_4:-82502045 | Msa0999930:CDS |
| CTTACCCTATGGATTATATG+AGG | 0.406292 | 6_4:-82502648 | Msa0999930:CDS |
| ACTACTGAAATTGCAATTAA+CGG | 0.408097 | 6_4:-82502304 | Msa0999930:CDS |
| AATGATTCGACCATGTGAAT+TGG | 0.408906 | 6_4:-82502509 | Msa0999930:CDS |
| CGAAATGCTGCGGTTATGTC+GGG | 0.411374 | 6_4:-82502718 | Msa0999930:CDS |
| TGGACTTAACATAAGCAATT+GGG | 0.420997 | 6_4:-82502830 | Msa0999930:CDS |
| TCATCATTTAAGAATCATCT+TGG | 0.425330 | 6_4:-82502790 | Msa0999930:CDS |
| TTAGGAGACTTCGGCACCTT+CGG | 0.426454 | 6_4:+82502412 | None:intergenic |
| TCGACCATGTGAATTGGTTA+AGG | 0.427145 | 6_4:-82502503 | Msa0999930:CDS |
| CATATCACCATAGGGAAATT+GGG | 0.436973 | 6_4:-82502684 | Msa0999930:CDS |
| CTATAACCTGGAGGGTTAGT+AGG | 0.446214 | 6_4:+82502571 | None:intergenic |
| TGATTCTTAAATGATGAAAC+AGG | 0.446858 | 6_4:+82502796 | None:intergenic |
| GCCTCAAACTACTTACCCTA+TGG | 0.455211 | 6_4:-82502659 | Msa0999930:CDS |
| CTCTTCGGCTTCTTTGCCTT+AGG | 0.455380 | 6_4:+82502394 | None:intergenic |
| TGTTATAGATGGGGCTCGGG+TGG | 0.456666 | 6_4:-82502217 | Msa0999930:CDS |
| TCGAAATGCTGCGGTTATGT+CGG | 0.458215 | 6_4:-82502719 | Msa0999930:CDS |
| TCTGATAGTAACAAACTTGT+TGG | 0.458637 | 6_4:+82502000 | None:intergenic |
| TAATTTAGTGTTGTAATGGA+TGG | 0.462352 | 6_4:-82502859 | Msa0999930:intron |
| CCATTCACCTTCTCGGCCAC+AGG | 0.464176 | 6_4:+82502457 | None:intergenic |
| ATTCCTGTTTGTTCTTGCAC+CGG | 0.473329 | 6_4:-82502253 | Msa0999930:CDS |
| GTTGTAATGGATGGAGATAA+TGG | 0.478647 | 6_4:-82502850 | Msa0999930:CDS |
| CAAGTTTGTTACTATCAGAT+AGG | 0.484534 | 6_4:-82501996 | None:intergenic |
| ACAATGTTATAGATGGGGCT+CGG | 0.487220 | 6_4:-82502221 | Msa0999930:CDS |
| GCCTCAACAATGTTATAGAT+GGG | 0.490081 | 6_4:-82502227 | Msa0999930:CDS |
| GGCACACGAGGTCCTCTCTT+CGG | 0.493154 | 6_4:+82502379 | None:intergenic |
| GCCACAGGTGCTTCCTCCAT+CGG | 0.494788 | 6_4:+82502472 | None:intergenic |
| TAGTATTCCCGAGACATCTT+CGG | 0.495994 | 6_4:-82502545 | Msa0999930:CDS |
| ACAACTGATGCCATCGATGC+CGG | 0.499881 | 6_4:-82502764 | Msa0999930:CDS |
| TTCTTTGCCTTAGGAGACTT+CGG | 0.501514 | 6_4:+82502403 | None:intergenic |
| ATAGATGGGGCTCGGGTGGG+TGG | 0.503131 | 6_4:-82502213 | Msa0999930:CDS |
| GAAGGAGAATTCTCGTCCTT+CGG | 0.503811 | 6_4:+82502358 | None:intergenic |
| CAATGTTATAGATGGGGCTC+GGG | 0.507375 | 6_4:-82502220 | Msa0999930:CDS |
| GTGCAAGAACAAACAGGAAT+CGG | 0.509122 | 6_4:+82502256 | None:intergenic |
| CCTGTGGCCGAGAAGGTGAA+TGG | 0.509475 | 6_4:-82502457 | Msa0999930:CDS |
| GTCCCGGTGCAAGAACAAAC+AGG | 0.509690 | 6_4:+82502250 | None:intergenic |
| GAGGCATCCCAATTTCCCTA+TGG | 0.509728 | 6_4:+82502677 | None:intergenic |
| ATGATGAGCCGAAGATGTCT+CGG | 0.513423 | 6_4:+82502537 | None:intergenic |
| CCACGTCGTTTAGTACTCAT+AGG | 0.513512 | 6_4:+82502148 | None:intergenic |
| CTCGGTGTTCGTTGAACCGA+AGG | 0.514112 | 6_4:+82502340 | None:intergenic |
| GTTATAGATGGGGCTCGGGT+GGG | 0.523781 | 6_4:-82502216 | Msa0999930:CDS |
| CAATAAGTCCTCAAATCTAT+CGG | 0.528692 | 6_4:+82502037 | None:intergenic |
| GCATCCCTCATATAATCCAT+AGG | 0.528771 | 6_4:+82502643 | None:intergenic |
| GCCGAGAAGGTGAATGGAAC+TGG | 0.530658 | 6_4:-82502451 | Msa0999930:CDS |
| GAAGGACGAGAATTCTCCTT+CGG | 0.531353 | 6_4:-82502356 | Msa0999930:CDS |
| GGAAGCACCTGTGGCCGAGA+AGG | 0.533123 | 6_4:-82502464 | Msa0999930:CDS |
| TCCATAGGGTAAGTAGTTTG+AGG | 0.540334 | 6_4:+82502658 | None:intergenic |
| GCATTTCGACTTCCAATCAA+AGG | 0.543040 | 6_4:+82502733 | None:intergenic |
| TTCCTGTTTGTTCTTGCACC+GGG | 0.544245 | 6_4:-82502252 | Msa0999930:CDS |
| CGACGTGGTGCTAGAATAGC+CGG | 0.548194 | 6_4:-82502133 | Msa0999930:CDS |
| CTAACGGTGCATATCACCAT+AGG | 0.548956 | 6_4:-82502693 | Msa0999930:CDS |
| TTCTCGTCCTTCGGCACACG+AGG | 0.552572 | 6_4:+82502367 | None:intergenic |
| ATAACATTGTTGAGGCGTCC+CGG | 0.554754 | 6_4:+82502234 | None:intergenic |
| CTCTGTTTGAACTCAAACAA+AGG | 0.558038 | 6_4:-82503061 | Msa0999930:intron |
| TGATGAGCCGAAGATGTCTC+GGG | 0.558891 | 6_4:+82502538 | None:intergenic |
| ATTAGAGAAACTTGCAGCCG+AGG | 0.559521 | 6_4:-82502077 | Msa0999930:CDS |
| CATCCCTCATATAATCCATA+GGG | 0.559663 | 6_4:+82502644 | None:intergenic |
| ATTAGAAAAGTTATAACCCT+CGG | 0.560267 | 6_4:+82502060 | None:intergenic |
| AGGACTTATTGGGCAAAACA+TGG | 0.561945 | 6_4:-82502025 | Msa0999930:CDS |
| ATGATACCTACTAACCCTCC+AGG | 0.562585 | 6_4:-82502577 | Msa0999930:CDS |
| GCCGATGGAGGAAGCACCTG+TGG | 0.568468 | 6_4:-82502473 | Msa0999930:CDS |
| GCGGTTATGTCGGGAACTAA+CGG | 0.570883 | 6_4:-82502709 | Msa0999930:CDS |
| GAGAGGACCTCGTGTGCCGA+AGG | 0.571472 | 6_4:-82502374 | Msa0999930:CDS |
| GCCGGAAGGAAAATGAGTAT+AGG | 0.573233 | 6_4:-82502115 | Msa0999930:CDS |
| TTAGAGAAACTTGCAGCCGA+GGG | 0.574547 | 6_4:-82502076 | Msa0999930:CDS |
| TGGATTATATGAGGGATGCA+TGG | 0.575577 | 6_4:-82502639 | Msa0999930:CDS |
| GAAGGTGCCGAAGTCTCCTA+AGG | 0.590939 | 6_4:-82502410 | Msa0999930:CDS |
| TTACCCTATGGATTATATGA+GGG | 0.595783 | 6_4:-82502647 | Msa0999930:CDS |
| GGACTTAACATAAGCAATTG+GGG | 0.601047 | 6_4:-82502829 | Msa0999930:CDS |
| TTCGGTTCAACGAACACCGA+GGG | 0.609274 | 6_4:-82502338 | Msa0999930:CDS |
| ATGCATGGATTAGTAGTCAG+AGG | 0.611474 | 6_4:-82502624 | Msa0999930:CDS |
| CGTTTAGTACTCATAGGCAA+AGG | 0.617983 | 6_4:+82502154 | None:intergenic |
| AAGGCAAAGAAGCCGAAGAG+AGG | 0.622231 | 6_4:-82502391 | Msa0999930:CDS |
| TAAGAAGAGGCAAGGACCGA+AGG | 0.629324 | 6_4:-82502428 | Msa0999930:CDS |
| TACTAGTACTATAACCTGGA+GGG | 0.630649 | 6_4:+82502563 | None:intergenic |
| GGAATACTAGTACTATAACC+TGG | 0.630941 | 6_4:+82502559 | None:intergenic |
| GCAGAAACATTTGTTGTACG+AGG | 0.632676 | 6_4:-82503126 | Msa0999930:CDS |
| CCCCATCTATAACATTGTTG+AGG | 0.635998 | 6_4:+82502226 | None:intergenic |
| TCTTCCTTAACCAATTCACA+TGG | 0.638004 | 6_4:+82502499 | None:intergenic |
| TTTCGACTTCCAATCAAAGG+CGG | 0.642330 | 6_4:+82502736 | None:intergenic |
| TGCATGGATTAGTAGTCAGA+GGG | 0.642777 | 6_4:-82502623 | Msa0999930:CDS |
| TGAATGGAACTGGTAAGAAG+AGG | 0.650068 | 6_4:-82502441 | Msa0999930:CDS |
| GGAACTGGTAAGAAGAGGCA+AGG | 0.651851 | 6_4:-82502436 | Msa0999930:CDS |
| TAACGGTGCATATCACCATA+GGG | 0.655398 | 6_4:-82502692 | Msa0999930:CDS |
| TAAGGAAGAAATGCCGATGG+AGG | 0.655765 | 6_4:-82502485 | Msa0999930:CDS |
| GATTGGAAGTCGAAATGCTG+CGG | 0.656562 | 6_4:-82502728 | Msa0999930:CDS |
| CCTCAACAATGTTATAGATG+GGG | 0.657807 | 6_4:-82502226 | Msa0999930:CDS |
| GGTTAAGGAAGAAATGCCGA+TGG | 0.695305 | 6_4:-82502488 | Msa0999930:CDS |
| ATACTAGTACTATAACCTGG+AGG | 0.700408 | 6_4:+82502562 | None:intergenic |
| GCAGTCTGCATGCTGCACAA+CGG | 0.703862 | 6_4:-82502191 | Msa0999930:CDS |
| CCTATGAGTACTAAACGACG+TGG | 0.715217 | 6_4:-82502148 | Msa0999930:CDS |
| GTGGTGCTAGAATAGCCGGA+AGG | 0.737428 | 6_4:-82502129 | Msa0999930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAGAAGGAAAAAAAAAA+AGG | + | chr6_4:82502236-82502255 | None:intergenic | 20.0% |
| !! | TTTGAGAAAAAAAAAAGAGA+AGG | + | chr6_4:82502249-82502268 | None:intergenic | 20.0% |
| !!! | GATTTTCAGAAACAAAAAAA+GGG | + | chr6_4:82502282-82502301 | None:intergenic | 20.0% |
| !!! | AGATTTTCAGAAACAAAAAA+AGG | + | chr6_4:82502283-82502302 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGTTTGGTCAAA+TGG | - | chr6_4:82502411-82502430 | Msa0999930:CDS | 20.0% |
| !!! | TTTGCATTATTTCTAAGAAA+CGG | + | chr6_4:82502631-82502650 | None:intergenic | 20.0% |
| !! | CTTAGAAATAATGCAAAAAT+TGG | - | chr6_4:82502634-82502653 | Msa0999930:CDS | 20.0% |
| !! | TTCATAATTTAGTGTTGTAA+TGG | - | chr6_4:82502718-82502737 | Msa0999930:CDS | 20.0% |
| !! | AAAGAGAAGGAAAAAAAAAA+AGG | + | chr6_4:82502236-82502255 | None:intergenic | 20.0% |
| !! | TTTGAGAAAAAAAAAAGAGA+AGG | + | chr6_4:82502249-82502268 | None:intergenic | 20.0% |
| !!! | GATTTTCAGAAACAAAAAAA+GGG | + | chr6_4:82502282-82502301 | None:intergenic | 20.0% |
| !!! | AGATTTTCAGAAACAAAAAA+AGG | + | chr6_4:82502283-82502302 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGTTTGGTCAAA+TGG | - | chr6_4:82502411-82502430 | Msa0999930:CDS | 20.0% |
| !!! | TTTGCATTATTTCTAAGAAA+CGG | + | chr6_4:82502631-82502650 | None:intergenic | 20.0% |
| !! | CTTAGAAATAATGCAAAAAT+TGG | - | chr6_4:82502634-82502653 | Msa0999930:CDS | 20.0% |
| !! | TTCATAATTTAGTGTTGTAA+TGG | - | chr6_4:82502718-82502737 | Msa0999930:CDS | 20.0% |
| ! | AGAAGAGAAGAAAACAAAAA+TGG | + | chr6_4:82502047-82502066 | None:intergenic | 25.0% |
| ! | CGAAAAATTGTTTCATAAAC+CGG | + | chr6_4:82502185-82502204 | None:intergenic | 25.0% |
| !! | TGTTTCTGAAAATCTCAAAA+TGG | - | chr6_4:82502288-82502307 | Msa0999930:CDS | 25.0% |
| !! | GTTTCTGAAAATCTCAAAAT+GGG | - | chr6_4:82502289-82502308 | Msa0999930:CDS | 25.0% |
| ! | AGAAATAATGCAAAAATTGG+TGG | - | chr6_4:82502637-82502656 | Msa0999930:CDS | 25.0% |
| !! | TAATTTAGTGTTGTAATGGA+TGG | - | chr6_4:82502722-82502741 | Msa0999930:CDS | 25.0% |
| ! | TGATTCTTAAATGATGAAAC+AGG | + | chr6_4:82502788-82502807 | None:intergenic | 25.0% |
| ! | TCATCATTTAAGAATCATCT+TGG | - | chr6_4:82502791-82502810 | Msa0999930:CDS | 25.0% |
| ! | ACTACTGAAATTGCAATTAA+CGG | - | chr6_4:82503277-82503296 | Msa0999930:intron | 25.0% |
| ! | ATTAGAAAAGTTATAACCCT+CGG | + | chr6_4:82503524-82503543 | None:intergenic | 25.0% |
| ! | AGAAGAGAAGAAAACAAAAA+TGG | + | chr6_4:82502047-82502066 | None:intergenic | 25.0% |
| ! | CGAAAAATTGTTTCATAAAC+CGG | + | chr6_4:82502185-82502204 | None:intergenic | 25.0% |
| !! | TGTTTCTGAAAATCTCAAAA+TGG | - | chr6_4:82502288-82502307 | Msa0999930:CDS | 25.0% |
| !! | GTTTCTGAAAATCTCAAAAT+GGG | - | chr6_4:82502289-82502308 | Msa0999930:CDS | 25.0% |
| ! | AGAAATAATGCAAAAATTGG+TGG | - | chr6_4:82502637-82502656 | Msa0999930:CDS | 25.0% |
| !! | TAATTTAGTGTTGTAATGGA+TGG | - | chr6_4:82502722-82502741 | Msa0999930:CDS | 25.0% |
| ! | TGATTCTTAAATGATGAAAC+AGG | + | chr6_4:82502788-82502807 | None:intergenic | 25.0% |
| ! | TCATCATTTAAGAATCATCT+TGG | - | chr6_4:82502791-82502810 | Msa0999930:CDS | 25.0% |
| ! | ACTACTGAAATTGCAATTAA+CGG | - | chr6_4:82503277-82503296 | Msa0999930:intron | 25.0% |
| ! | ATTAGAAAAGTTATAACCCT+CGG | + | chr6_4:82503524-82503543 | None:intergenic | 25.0% |
| AGAAAGAGAAATTTGTGTTG+TGG | + | chr6_4:82502023-82502042 | None:intergenic | 30.0% | |
| TGTTTGAAAAATTGGTGAAC+CGG | + | chr6_4:82502137-82502156 | None:intergenic | 30.0% | |
| !! | CACCAATTTTTCAAACAAAC+CGG | - | chr6_4:82502140-82502159 | Msa0999930:CDS | 30.0% |
| !! | AACCGGTTTGTTTGAAAAAT+TGG | + | chr6_4:82502145-82502164 | None:intergenic | 30.0% |
| TGAAACAAGTTTGATTCAAC+CGG | + | chr6_4:82502162-82502181 | None:intergenic | 30.0% | |
| ! | TTGAATCAAACTTGTTTCAC+CGG | - | chr6_4:82502163-82502182 | Msa0999930:CDS | 30.0% |
| AAAAAAAAAAGGACAGTACC+TGG | + | chr6_4:82502225-82502244 | None:intergenic | 30.0% | |
| ! | AAATTGGTGGATAATTTGTG+AGG | - | chr6_4:82502650-82502669 | Msa0999930:CDS | 30.0% |
| ATGGACTTAACATAAGCAAT+TGG | - | chr6_4:82502750-82502769 | Msa0999930:CDS | 30.0% | |
| TGGACTTAACATAAGCAATT+GGG | - | chr6_4:82502751-82502770 | Msa0999930:CDS | 30.0% | |
| ! | TTACCCTATGGATTATATGA+GGG | - | chr6_4:82502934-82502953 | Msa0999930:intron | 30.0% |
| ! | GCAATTTCAGTAGTTTTCTT+CGG | + | chr6_4:82503271-82503290 | None:intergenic | 30.0% |
| CTACTGAAATTGCAATTAAC+GGG | - | chr6_4:82503278-82503297 | Msa0999930:intron | 30.0% | |
| TTTCTAATCCGATAGATTTG+AGG | - | chr6_4:82503536-82503555 | Msa0999930:intron | 30.0% | |
| CAATAAGTCCTCAAATCTAT+CGG | + | chr6_4:82503547-82503566 | None:intergenic | 30.0% | |
| GATAGATTTGAGGACTTATT+GGG | - | chr6_4:82503546-82503565 | Msa0999930:intron | 30.0% | |
| TCTGATAGTAACAAACTTGT+TGG | + | chr6_4:82503584-82503603 | None:intergenic | 30.0% | |
| AGAAAGAGAAATTTGTGTTG+TGG | + | chr6_4:82502023-82502042 | None:intergenic | 30.0% | |
| TGTTTGAAAAATTGGTGAAC+CGG | + | chr6_4:82502137-82502156 | None:intergenic | 30.0% | |
| !! | CACCAATTTTTCAAACAAAC+CGG | - | chr6_4:82502140-82502159 | Msa0999930:CDS | 30.0% |
| !! | AACCGGTTTGTTTGAAAAAT+TGG | + | chr6_4:82502145-82502164 | None:intergenic | 30.0% |
| TGAAACAAGTTTGATTCAAC+CGG | + | chr6_4:82502162-82502181 | None:intergenic | 30.0% | |
| ! | TTGAATCAAACTTGTTTCAC+CGG | - | chr6_4:82502163-82502182 | Msa0999930:CDS | 30.0% |
| AAAAAAAAAAGGACAGTACC+TGG | + | chr6_4:82502225-82502244 | None:intergenic | 30.0% | |
| ! | AAATTGGTGGATAATTTGTG+AGG | - | chr6_4:82502650-82502669 | Msa0999930:CDS | 30.0% |
| ATGGACTTAACATAAGCAAT+TGG | - | chr6_4:82502750-82502769 | Msa0999930:CDS | 30.0% | |
| TGGACTTAACATAAGCAATT+GGG | - | chr6_4:82502751-82502770 | Msa0999930:CDS | 30.0% | |
| ! | TTACCCTATGGATTATATGA+GGG | - | chr6_4:82502934-82502953 | Msa0999930:intron | 30.0% |
| ! | GCAATTTCAGTAGTTTTCTT+CGG | + | chr6_4:82503271-82503290 | None:intergenic | 30.0% |
| CTACTGAAATTGCAATTAAC+GGG | - | chr6_4:82503278-82503297 | Msa0999930:intron | 30.0% | |
| TTTCTAATCCGATAGATTTG+AGG | - | chr6_4:82503536-82503555 | Msa0999930:intron | 30.0% | |
| CAATAAGTCCTCAAATCTAT+CGG | + | chr6_4:82503547-82503566 | None:intergenic | 30.0% | |
| GATAGATTTGAGGACTTATT+GGG | - | chr6_4:82503546-82503565 | Msa0999930:intron | 30.0% | |
| TCTGATAGTAACAAACTTGT+TGG | + | chr6_4:82503584-82503603 | None:intergenic | 30.0% | |
| AAAAATTGGTGAACCGGTAA+TGG | + | chr6_4:82502131-82502150 | None:intergenic | 35.0% | |
| TGTTTGGTCAAATGGATCTT+AGG | - | chr6_4:82502419-82502438 | Msa0999930:CDS | 35.0% | |
| ! | CAACAAATGTTTCTGCTTCT+GGG | + | chr6_4:82502451-82502470 | None:intergenic | 35.0% |
| ! | ACAACAAATGTTTCTGCTTC+TGG | + | chr6_4:82502452-82502471 | None:intergenic | 35.0% |
| !! | CTTGTTGAACCATTTTTGTC+TGG | - | chr6_4:82502492-82502511 | Msa0999930:CDS | 35.0% |
| AGAGTCAAACCAGACAAAAA+TGG | + | chr6_4:82502504-82502523 | None:intergenic | 35.0% | |
| CTCTGTTTGAACTCAAACAA+AGG | - | chr6_4:82502520-82502539 | Msa0999930:CDS | 35.0% | |
| GTTTGAACTCAAACAAAGGT+AGG | - | chr6_4:82502524-82502543 | Msa0999930:CDS | 35.0% | |
| !! | GTTGTAATGGATGGAGATAA+TGG | - | chr6_4:82502731-82502750 | Msa0999930:CDS | 35.0% |
| GGACTTAACATAAGCAATTG+GGG | - | chr6_4:82502752-82502771 | Msa0999930:CDS | 35.0% | |
| CATATCACCATAGGGAAATT+GGG | - | chr6_4:82502897-82502916 | Msa0999930:intron | 35.0% | |
| ! | CTTACCCTATGGATTATATG+AGG | - | chr6_4:82502933-82502952 | Msa0999930:intron | 35.0% |
| CATCCCTCATATAATCCATA+GGG | + | chr6_4:82502940-82502959 | None:intergenic | 35.0% | |
| TACTAGTACTATAACCTGGA+GGG | + | chr6_4:82503021-82503040 | None:intergenic | 35.0% | |
| ATACTAGTACTATAACCTGG+AGG | + | chr6_4:82503022-82503041 | None:intergenic | 35.0% | |
| GGAATACTAGTACTATAACC+TGG | + | chr6_4:82503025-82503044 | None:intergenic | 35.0% | |
| AATGATTCGACCATGTGAAT+TGG | - | chr6_4:82503072-82503091 | Msa0999930:CDS | 35.0% | |
| TCTTCCTTAACCAATTCACA+TGG | + | chr6_4:82503085-82503104 | None:intergenic | 35.0% | |
| TGCAATTAACGGGATTGATT+TGG | - | chr6_4:82503288-82503307 | Msa0999930:intron | 35.0% | |
| GCCTCAACAATGTTATAGAT+GGG | - | chr6_4:82503354-82503373 | Msa0999930:intron | 35.0% | |
| CCTCAACAATGTTATAGATG+GGG | - | chr6_4:82503355-82503374 | Msa0999930:intron | 35.0% | |
| ! | TCCTATACTCATTTTCCTTC+CGG | + | chr6_4:82503470-82503489 | None:intergenic | 35.0% |
| CGATAGATTTGAGGACTTAT+TGG | - | chr6_4:82503545-82503564 | Msa0999930:intron | 35.0% | |
| AAAAATTGGTGAACCGGTAA+TGG | + | chr6_4:82502131-82502150 | None:intergenic | 35.0% | |
| TGTTTGGTCAAATGGATCTT+AGG | - | chr6_4:82502419-82502438 | Msa0999930:CDS | 35.0% | |
| ! | CAACAAATGTTTCTGCTTCT+GGG | + | chr6_4:82502451-82502470 | None:intergenic | 35.0% |
| ! | ACAACAAATGTTTCTGCTTC+TGG | + | chr6_4:82502452-82502471 | None:intergenic | 35.0% |
| !! | CTTGTTGAACCATTTTTGTC+TGG | - | chr6_4:82502492-82502511 | Msa0999930:CDS | 35.0% |
| AGAGTCAAACCAGACAAAAA+TGG | + | chr6_4:82502504-82502523 | None:intergenic | 35.0% | |
| CTCTGTTTGAACTCAAACAA+AGG | - | chr6_4:82502520-82502539 | Msa0999930:CDS | 35.0% | |
| GTTTGAACTCAAACAAAGGT+AGG | - | chr6_4:82502524-82502543 | Msa0999930:CDS | 35.0% | |
| !! | GTTGTAATGGATGGAGATAA+TGG | - | chr6_4:82502731-82502750 | Msa0999930:CDS | 35.0% |
| GGACTTAACATAAGCAATTG+GGG | - | chr6_4:82502752-82502771 | Msa0999930:CDS | 35.0% | |
| CATATCACCATAGGGAAATT+GGG | - | chr6_4:82502897-82502916 | Msa0999930:intron | 35.0% | |
| ! | CTTACCCTATGGATTATATG+AGG | - | chr6_4:82502933-82502952 | Msa0999930:intron | 35.0% |
| CATCCCTCATATAATCCATA+GGG | + | chr6_4:82502940-82502959 | None:intergenic | 35.0% | |
| TACTAGTACTATAACCTGGA+GGG | + | chr6_4:82503021-82503040 | None:intergenic | 35.0% | |
| ATACTAGTACTATAACCTGG+AGG | + | chr6_4:82503022-82503041 | None:intergenic | 35.0% | |
| GGAATACTAGTACTATAACC+TGG | + | chr6_4:82503025-82503044 | None:intergenic | 35.0% | |
| AATGATTCGACCATGTGAAT+TGG | - | chr6_4:82503072-82503091 | Msa0999930:CDS | 35.0% | |
| TCTTCCTTAACCAATTCACA+TGG | + | chr6_4:82503085-82503104 | None:intergenic | 35.0% | |
| TGCAATTAACGGGATTGATT+TGG | - | chr6_4:82503288-82503307 | Msa0999930:intron | 35.0% | |
| GCCTCAACAATGTTATAGAT+GGG | - | chr6_4:82503354-82503373 | Msa0999930:intron | 35.0% | |
| CCTCAACAATGTTATAGATG+GGG | - | chr6_4:82503355-82503374 | Msa0999930:intron | 35.0% | |
| ! | TCCTATACTCATTTTCCTTC+CGG | + | chr6_4:82503470-82503489 | None:intergenic | 35.0% |
| CGATAGATTTGAGGACTTAT+TGG | - | chr6_4:82503545-82503564 | Msa0999930:intron | 35.0% | |
| !! | TGGCTGCAAGTTTTGACATT+AGG | + | chr6_4:82502003-82502022 | None:intergenic | 40.0% |
| CTTCTTCGTTGCTCCAAAAA+TGG | - | chr6_4:82502062-82502081 | Msa0999930:CDS | 40.0% | |
| !! | CAGAGAAGAATCGCCATTTT+TGG | + | chr6_4:82502078-82502097 | None:intergenic | 40.0% |
| ACCCTTCTTTCAACCATTAC+CGG | - | chr6_4:82502115-82502134 | Msa0999930:CDS | 40.0% | |
| ! | ACCGGTAATGGTTGAAAGAA+GGG | + | chr6_4:82502119-82502138 | None:intergenic | 40.0% |
| ! | AACCGGTAATGGTTGAAAGA+AGG | + | chr6_4:82502120-82502139 | None:intergenic | 40.0% |
| GATCTCATAACACTTGTACC+AGG | - | chr6_4:82502204-82502223 | Msa0999930:CDS | 40.0% | |
| !! | GCAGAAACATTTGTTGTACG+AGG | - | chr6_4:82502455-82502474 | Msa0999930:CDS | 40.0% |
| TTTCGACTTCCAATCAAAGG+CGG | + | chr6_4:82502848-82502867 | None:intergenic | 40.0% | |
| GCATTTCGACTTCCAATCAA+AGG | + | chr6_4:82502851-82502870 | None:intergenic | 40.0% | |
| TAACGGTGCATATCACCATA+GGG | - | chr6_4:82502889-82502908 | Msa0999930:intron | 40.0% | |
| GCATATCACCATAGGGAAAT+TGG | - | chr6_4:82502896-82502915 | Msa0999930:intron | 40.0% | |
| TCCATAGGGTAAGTAGTTTG+AGG | + | chr6_4:82502926-82502945 | None:intergenic | 40.0% | |
| GCATCCCTCATATAATCCAT+AGG | + | chr6_4:82502941-82502960 | None:intergenic | 40.0% | |
| TGGATTATATGAGGGATGCA+TGG | - | chr6_4:82502942-82502961 | Msa0999930:intron | 40.0% | |
| !! | ATGCATGGATTAGTAGTCAG+AGG | - | chr6_4:82502957-82502976 | Msa0999930:intron | 40.0% |
| !! | TGCATGGATTAGTAGTCAGA+GGG | - | chr6_4:82502958-82502977 | Msa0999930:intron | 40.0% |
| TAGTATTCCCGAGACATCTT+CGG | - | chr6_4:82503036-82503055 | Msa0999930:intron | 40.0% | |
| TCGACCATGTGAATTGGTTA+AGG | - | chr6_4:82503078-82503097 | Msa0999930:CDS | 40.0% | |
| TGAATGGAACTGGTAAGAAG+AGG | - | chr6_4:82503140-82503159 | Msa0999930:CDS | 40.0% | |
| TTCTTTGCCTTAGGAGACTT+CGG | + | chr6_4:82503181-82503200 | None:intergenic | 40.0% | |
| GTGCAAGAACAAACAGGAAT+CGG | + | chr6_4:82503328-82503347 | None:intergenic | 40.0% | |
| ATTCCTGTTTGTTCTTGCAC+CGG | - | chr6_4:82503328-82503347 | Msa0999930:intron | 40.0% | |
| CGCCTCAACAATGTTATAGA+TGG | - | chr6_4:82503353-82503372 | Msa0999930:intron | 40.0% | |
| CCCCATCTATAACATTGTTG+AGG | + | chr6_4:82503358-82503377 | None:intergenic | 40.0% | |
| ACAATGTTATAGATGGGGCT+CGG | - | chr6_4:82503360-82503379 | Msa0999930:intron | 40.0% | |
| CGTTTAGTACTCATAGGCAA+AGG | + | chr6_4:82503430-82503449 | None:intergenic | 40.0% | |
| AGGACTTATTGGGCAAAACA+TGG | - | chr6_4:82503556-82503575 | Msa0999930:intron | 40.0% | |
| !! | TGGCTGCAAGTTTTGACATT+AGG | + | chr6_4:82502003-82502022 | None:intergenic | 40.0% |
| CTTCTTCGTTGCTCCAAAAA+TGG | - | chr6_4:82502062-82502081 | Msa0999930:CDS | 40.0% | |
| !! | CAGAGAAGAATCGCCATTTT+TGG | + | chr6_4:82502078-82502097 | None:intergenic | 40.0% |
| ACCCTTCTTTCAACCATTAC+CGG | - | chr6_4:82502115-82502134 | Msa0999930:CDS | 40.0% | |
| ! | ACCGGTAATGGTTGAAAGAA+GGG | + | chr6_4:82502119-82502138 | None:intergenic | 40.0% |
| ! | AACCGGTAATGGTTGAAAGA+AGG | + | chr6_4:82502120-82502139 | None:intergenic | 40.0% |
| GATCTCATAACACTTGTACC+AGG | - | chr6_4:82502204-82502223 | Msa0999930:CDS | 40.0% | |
| !! | GCAGAAACATTTGTTGTACG+AGG | - | chr6_4:82502455-82502474 | Msa0999930:CDS | 40.0% |
| TTTCGACTTCCAATCAAAGG+CGG | + | chr6_4:82502848-82502867 | None:intergenic | 40.0% | |
| GCATTTCGACTTCCAATCAA+AGG | + | chr6_4:82502851-82502870 | None:intergenic | 40.0% | |
| TAACGGTGCATATCACCATA+GGG | - | chr6_4:82502889-82502908 | Msa0999930:intron | 40.0% | |
| GCATATCACCATAGGGAAAT+TGG | - | chr6_4:82502896-82502915 | Msa0999930:intron | 40.0% | |
| TCCATAGGGTAAGTAGTTTG+AGG | + | chr6_4:82502926-82502945 | None:intergenic | 40.0% | |
| GCATCCCTCATATAATCCAT+AGG | + | chr6_4:82502941-82502960 | None:intergenic | 40.0% | |
| TGGATTATATGAGGGATGCA+TGG | - | chr6_4:82502942-82502961 | Msa0999930:intron | 40.0% | |
| !! | ATGCATGGATTAGTAGTCAG+AGG | - | chr6_4:82502957-82502976 | Msa0999930:intron | 40.0% |
| !! | TGCATGGATTAGTAGTCAGA+GGG | - | chr6_4:82502958-82502977 | Msa0999930:intron | 40.0% |
| TAGTATTCCCGAGACATCTT+CGG | - | chr6_4:82503036-82503055 | Msa0999930:intron | 40.0% | |
| TCGACCATGTGAATTGGTTA+AGG | - | chr6_4:82503078-82503097 | Msa0999930:CDS | 40.0% | |
| TGAATGGAACTGGTAAGAAG+AGG | - | chr6_4:82503140-82503159 | Msa0999930:CDS | 40.0% | |
| TTCTTTGCCTTAGGAGACTT+CGG | + | chr6_4:82503181-82503200 | None:intergenic | 40.0% | |
| GTGCAAGAACAAACAGGAAT+CGG | + | chr6_4:82503328-82503347 | None:intergenic | 40.0% | |
| ATTCCTGTTTGTTCTTGCAC+CGG | - | chr6_4:82503328-82503347 | Msa0999930:intron | 40.0% | |
| CGCCTCAACAATGTTATAGA+TGG | - | chr6_4:82503353-82503372 | Msa0999930:intron | 40.0% | |
| CCCCATCTATAACATTGTTG+AGG | + | chr6_4:82503358-82503377 | None:intergenic | 40.0% | |
| ACAATGTTATAGATGGGGCT+CGG | - | chr6_4:82503360-82503379 | Msa0999930:intron | 40.0% | |
| CGTTTAGTACTCATAGGCAA+AGG | + | chr6_4:82503430-82503449 | None:intergenic | 40.0% | |
| AGGACTTATTGGGCAAAACA+TGG | - | chr6_4:82503556-82503575 | Msa0999930:intron | 40.0% | |
| GATTGGAAGTCGAAATGCTG+CGG | - | chr6_4:82502853-82502872 | Msa0999930:CDS | 45.0% | |
| TCGAAATGCTGCGGTTATGT+CGG | - | chr6_4:82502862-82502881 | Msa0999930:intron | 45.0% | |
| CTAACGGTGCATATCACCAT+AGG | - | chr6_4:82502888-82502907 | Msa0999930:intron | 45.0% | |
| GCCTCAAACTACTTACCCTA+TGG | - | chr6_4:82502922-82502941 | Msa0999930:intron | 45.0% | |
| ATGATACCTACTAACCCTCC+AGG | - | chr6_4:82503004-82503023 | Msa0999930:intron | 45.0% | |
| ! | CTATAACCTGGAGGGTTAGT+AGG | + | chr6_4:82503013-82503032 | None:intergenic | 45.0% |
| ATGATGAGCCGAAGATGTCT+CGG | + | chr6_4:82503047-82503066 | None:intergenic | 45.0% | |
| GGTTAAGGAAGAAATGCCGA+TGG | - | chr6_4:82503093-82503112 | Msa0999930:CDS | 45.0% | |
| TAAGGAAGAAATGCCGATGG+AGG | - | chr6_4:82503096-82503115 | Msa0999930:CDS | 45.0% | |
| ACCAGTTCCATTCACCTTCT+CGG | + | chr6_4:82503134-82503153 | None:intergenic | 45.0% | |
| GAAGGAGAATTCTCGTCCTT+CGG | + | chr6_4:82503226-82503245 | None:intergenic | 45.0% | |
| GAAGGACGAGAATTCTCCTT+CGG | - | chr6_4:82503225-82503244 | Msa0999930:intron | 45.0% | |
| TTCCTGTTTGTTCTTGCACC+GGG | - | chr6_4:82503329-82503348 | Msa0999930:intron | 45.0% | |
| ! | ATAACATTGTTGAGGCGTCC+CGG | + | chr6_4:82503350-82503369 | None:intergenic | 45.0% |
| CAATGTTATAGATGGGGCTC+GGG | - | chr6_4:82503361-82503380 | Msa0999930:intron | 45.0% | |
| CCACGTCGTTTAGTACTCAT+AGG | + | chr6_4:82503436-82503455 | None:intergenic | 45.0% | |
| CCTATGAGTACTAAACGACG+TGG | - | chr6_4:82503433-82503452 | Msa0999930:intron | 45.0% | |
| GCCGGAAGGAAAATGAGTAT+AGG | - | chr6_4:82503466-82503485 | Msa0999930:intron | 45.0% | |
| ATTAGAGAAACTTGCAGCCG+AGG | - | chr6_4:82503504-82503523 | Msa0999930:intron | 45.0% | |
| TTAGAGAAACTTGCAGCCGA+GGG | - | chr6_4:82503505-82503524 | Msa0999930:intron | 45.0% | |
| GATTGGAAGTCGAAATGCTG+CGG | - | chr6_4:82502853-82502872 | Msa0999930:CDS | 45.0% | |
| TCGAAATGCTGCGGTTATGT+CGG | - | chr6_4:82502862-82502881 | Msa0999930:intron | 45.0% | |
| CTAACGGTGCATATCACCAT+AGG | - | chr6_4:82502888-82502907 | Msa0999930:intron | 45.0% | |
| GCCTCAAACTACTTACCCTA+TGG | - | chr6_4:82502922-82502941 | Msa0999930:intron | 45.0% | |
| ATGATACCTACTAACCCTCC+AGG | - | chr6_4:82503004-82503023 | Msa0999930:intron | 45.0% | |
| ! | CTATAACCTGGAGGGTTAGT+AGG | + | chr6_4:82503013-82503032 | None:intergenic | 45.0% |
| ATGATGAGCCGAAGATGTCT+CGG | + | chr6_4:82503047-82503066 | None:intergenic | 45.0% | |
| GGTTAAGGAAGAAATGCCGA+TGG | - | chr6_4:82503093-82503112 | Msa0999930:CDS | 45.0% | |
| TAAGGAAGAAATGCCGATGG+AGG | - | chr6_4:82503096-82503115 | Msa0999930:CDS | 45.0% | |
| ACCAGTTCCATTCACCTTCT+CGG | + | chr6_4:82503134-82503153 | None:intergenic | 45.0% | |
| GAAGGAGAATTCTCGTCCTT+CGG | + | chr6_4:82503226-82503245 | None:intergenic | 45.0% | |
| GAAGGACGAGAATTCTCCTT+CGG | - | chr6_4:82503225-82503244 | Msa0999930:intron | 45.0% | |
| TTCCTGTTTGTTCTTGCACC+GGG | - | chr6_4:82503329-82503348 | Msa0999930:intron | 45.0% | |
| ! | ATAACATTGTTGAGGCGTCC+CGG | + | chr6_4:82503350-82503369 | None:intergenic | 45.0% |
| CAATGTTATAGATGGGGCTC+GGG | - | chr6_4:82503361-82503380 | Msa0999930:intron | 45.0% | |
| CCACGTCGTTTAGTACTCAT+AGG | + | chr6_4:82503436-82503455 | None:intergenic | 45.0% | |
| CCTATGAGTACTAAACGACG+TGG | - | chr6_4:82503433-82503452 | Msa0999930:intron | 45.0% | |
| GCCGGAAGGAAAATGAGTAT+AGG | - | chr6_4:82503466-82503485 | Msa0999930:intron | 45.0% | |
| ATTAGAGAAACTTGCAGCCG+AGG | - | chr6_4:82503504-82503523 | Msa0999930:intron | 45.0% | |
| TTAGAGAAACTTGCAGCCGA+GGG | - | chr6_4:82503505-82503524 | Msa0999930:intron | 45.0% | |
| !!! | TTTTATTTTTATTTTTTGTT+TGG | - | chr6_4:82502403-82502422 | Msa0999930:CDS | 5.0% |
| !!! | TTTTATTTTTATTTTTTGTT+TGG | - | chr6_4:82502403-82502422 | Msa0999930:CDS | 5.0% |
| ACAACTGATGCCATCGATGC+CGG | - | chr6_4:82502817-82502836 | Msa0999930:CDS | 50.0% | |
| ! | CCAATCAAAGGCGGCTTTTC+CGG | + | chr6_4:82502839-82502858 | None:intergenic | 50.0% |
| CGAAATGCTGCGGTTATGTC+GGG | - | chr6_4:82502863-82502882 | Msa0999930:intron | 50.0% | |
| GCGGTTATGTCGGGAACTAA+CGG | - | chr6_4:82502872-82502891 | Msa0999930:intron | 50.0% | |
| ! | GAGGCATCCCAATTTCCCTA+TGG | + | chr6_4:82502907-82502926 | None:intergenic | 50.0% |
| TGATGAGCCGAAGATGTCTC+GGG | + | chr6_4:82503046-82503065 | None:intergenic | 50.0% | |
| GGAACTGGTAAGAAGAGGCA+AGG | - | chr6_4:82503145-82503164 | Msa0999930:intron | 50.0% | |
| TAAGAAGAGGCAAGGACCGA+AGG | - | chr6_4:82503153-82503172 | Msa0999930:intron | 50.0% | |
| TTAGGAGACTTCGGCACCTT+CGG | + | chr6_4:82503172-82503191 | None:intergenic | 50.0% | |
| CTCTTCGGCTTCTTTGCCTT+AGG | + | chr6_4:82503190-82503209 | None:intergenic | 50.0% | |
| AAGGCAAAGAAGCCGAAGAG+AGG | - | chr6_4:82503190-82503209 | Msa0999930:intron | 50.0% | |
| TTCGGTTCAACGAACACCGA+GGG | - | chr6_4:82503243-82503262 | Msa0999930:intron | 50.0% | |
| !!! | GTAGTTTTCTTCGGTGCCCT+CGG | + | chr6_4:82503262-82503281 | None:intergenic | 50.0% |
| ACAACTGATGCCATCGATGC+CGG | - | chr6_4:82502817-82502836 | Msa0999930:CDS | 50.0% | |
| ! | CCAATCAAAGGCGGCTTTTC+CGG | + | chr6_4:82502839-82502858 | None:intergenic | 50.0% |
| CGAAATGCTGCGGTTATGTC+GGG | - | chr6_4:82502863-82502882 | Msa0999930:intron | 50.0% | |
| GCGGTTATGTCGGGAACTAA+CGG | - | chr6_4:82502872-82502891 | Msa0999930:intron | 50.0% | |
| ! | GAGGCATCCCAATTTCCCTA+TGG | + | chr6_4:82502907-82502926 | None:intergenic | 50.0% |
| TGATGAGCCGAAGATGTCTC+GGG | + | chr6_4:82503046-82503065 | None:intergenic | 50.0% | |
| GGAACTGGTAAGAAGAGGCA+AGG | - | chr6_4:82503145-82503164 | Msa0999930:intron | 50.0% | |
| TAAGAAGAGGCAAGGACCGA+AGG | - | chr6_4:82503153-82503172 | Msa0999930:intron | 50.0% | |
| TTAGGAGACTTCGGCACCTT+CGG | + | chr6_4:82503172-82503191 | None:intergenic | 50.0% | |
| CTCTTCGGCTTCTTTGCCTT+AGG | + | chr6_4:82503190-82503209 | None:intergenic | 50.0% | |
| AAGGCAAAGAAGCCGAAGAG+AGG | - | chr6_4:82503190-82503209 | Msa0999930:intron | 50.0% | |
| TTCGGTTCAACGAACACCGA+GGG | - | chr6_4:82503243-82503262 | Msa0999930:intron | 50.0% | |
| !!! | GTAGTTTTCTTCGGTGCCCT+CGG | + | chr6_4:82503262-82503281 | None:intergenic | 50.0% |
| CCGGAAAAGCCGCCTTTGAT+TGG | - | chr6_4:82502836-82502855 | Msa0999930:CDS | 55.0% | |
| GCCGAGAAGGTGAATGGAAC+TGG | - | chr6_4:82503130-82503149 | Msa0999930:CDS | 55.0% | |
| !! | GAAGGTGCCGAAGTCTCCTA+AGG | - | chr6_4:82503171-82503190 | Msa0999930:intron | 55.0% |
| !! | CTCGGTGTTCGTTGAACCGA+AGG | + | chr6_4:82503244-82503263 | None:intergenic | 55.0% |
| CTTCGGTTCAACGAACACCG+AGG | - | chr6_4:82503242-82503261 | Msa0999930:intron | 55.0% | |
| GTCCCGGTGCAAGAACAAAC+AGG | + | chr6_4:82503334-82503353 | None:intergenic | 55.0% | |
| TGTTATAGATGGGGCTCGGG+TGG | - | chr6_4:82503364-82503383 | Msa0999930:intron | 55.0% | |
| GTTATAGATGGGGCTCGGGT+GGG | - | chr6_4:82503365-82503384 | Msa0999930:intron | 55.0% | |
| GCAGTCTGCATGCTGCACAA+CGG | - | chr6_4:82503390-82503409 | Msa0999930:intron | 55.0% | |
| ! | CGACGTGGTGCTAGAATAGC+CGG | - | chr6_4:82503448-82503467 | Msa0999930:intron | 55.0% |
| ! | GTGGTGCTAGAATAGCCGGA+AGG | - | chr6_4:82503452-82503471 | Msa0999930:intron | 55.0% |
| CCGGAAAAGCCGCCTTTGAT+TGG | - | chr6_4:82502836-82502855 | Msa0999930:CDS | 55.0% | |
| GCCGAGAAGGTGAATGGAAC+TGG | - | chr6_4:82503130-82503149 | Msa0999930:CDS | 55.0% | |
| !! | GAAGGTGCCGAAGTCTCCTA+AGG | - | chr6_4:82503171-82503190 | Msa0999930:intron | 55.0% |
| !! | CTCGGTGTTCGTTGAACCGA+AGG | + | chr6_4:82503244-82503263 | None:intergenic | 55.0% |
| CTTCGGTTCAACGAACACCG+AGG | - | chr6_4:82503242-82503261 | Msa0999930:intron | 55.0% | |
| GTCCCGGTGCAAGAACAAAC+AGG | + | chr6_4:82503334-82503353 | None:intergenic | 55.0% | |
| TGTTATAGATGGGGCTCGGG+TGG | - | chr6_4:82503364-82503383 | Msa0999930:intron | 55.0% | |
| GTTATAGATGGGGCTCGGGT+GGG | - | chr6_4:82503365-82503384 | Msa0999930:intron | 55.0% | |
| GCAGTCTGCATGCTGCACAA+CGG | - | chr6_4:82503390-82503409 | Msa0999930:intron | 55.0% | |
| ! | CGACGTGGTGCTAGAATAGC+CGG | - | chr6_4:82503448-82503467 | Msa0999930:intron | 55.0% |
| ! | GTGGTGCTAGAATAGCCGGA+AGG | - | chr6_4:82503452-82503471 | Msa0999930:intron | 55.0% |
| GCCACAGGTGCTTCCTCCAT+CGG | + | chr6_4:82503112-82503131 | None:intergenic | 60.0% | |
| CCATTCACCTTCTCGGCCAC+AGG | + | chr6_4:82503127-82503146 | None:intergenic | 60.0% | |
| CCTGTGGCCGAGAAGGTGAA+TGG | - | chr6_4:82503124-82503143 | Msa0999930:CDS | 60.0% | |
| GGCACACGAGGTCCTCTCTT+CGG | + | chr6_4:82503205-82503224 | None:intergenic | 60.0% | |
| TTCTCGTCCTTCGGCACACG+AGG | + | chr6_4:82503217-82503236 | None:intergenic | 60.0% | |
| GCCACAGGTGCTTCCTCCAT+CGG | + | chr6_4:82503112-82503131 | None:intergenic | 60.0% | |
| CCATTCACCTTCTCGGCCAC+AGG | + | chr6_4:82503127-82503146 | None:intergenic | 60.0% | |
| CCTGTGGCCGAGAAGGTGAA+TGG | - | chr6_4:82503124-82503143 | Msa0999930:CDS | 60.0% | |
| GGCACACGAGGTCCTCTCTT+CGG | + | chr6_4:82503205-82503224 | None:intergenic | 60.0% | |
| TTCTCGTCCTTCGGCACACG+AGG | + | chr6_4:82503217-82503236 | None:intergenic | 60.0% | |
| !! | GGCGGCTTTTCCGGCATCGA+TGG | + | chr6_4:82502830-82502849 | None:intergenic | 65.0% |
| !! | GCCGATGGAGGAAGCACCTG+TGG | - | chr6_4:82503108-82503127 | Msa0999930:CDS | 65.0% |
| !! | GGAAGCACCTGTGGCCGAGA+AGG | - | chr6_4:82503117-82503136 | Msa0999930:CDS | 65.0% |
| GAGAGGACCTCGTGTGCCGA+AGG | - | chr6_4:82503207-82503226 | Msa0999930:intron | 65.0% | |
| ATAGATGGGGCTCGGGTGGG+TGG | - | chr6_4:82503368-82503387 | Msa0999930:intron | 65.0% | |
| !! | GGCGGCTTTTCCGGCATCGA+TGG | + | chr6_4:82502830-82502849 | None:intergenic | 65.0% |
| !! | GCCGATGGAGGAAGCACCTG+TGG | - | chr6_4:82503108-82503127 | Msa0999930:CDS | 65.0% |
| !! | GGAAGCACCTGTGGCCGAGA+AGG | - | chr6_4:82503117-82503136 | Msa0999930:CDS | 65.0% |
| GAGAGGACCTCGTGTGCCGA+AGG | - | chr6_4:82503207-82503226 | Msa0999930:intron | 65.0% | |
| ATAGATGGGGCTCGGGTGGG+TGG | - | chr6_4:82503368-82503387 | Msa0999930:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 82501997 | 82503606 | 82501997 | ID=Msa0999930;Name=Msa0999930 |
| chr6_4 | mRNA | 82501997 | 82503606 | 82501997 | ID=Msa0999930-mRNA-1;Parent=Msa0999930;Name=Msa0999930-mRNA-1;_AED=0.19;_eAED=0.22;_QI=0|0|0.33|0.66|0|0|3|0|328 |
| chr6_4 | exon | 82503598 | 82503606 | 82503598 | ID=Msa0999930-mRNA-1:exon:15874;Parent=Msa0999930-mRNA-1 |
| chr6_4 | exon | 82503062 | 82503162 | 82503062 | ID=Msa0999930-mRNA-1:exon:15873;Parent=Msa0999930-mRNA-1 |
| chr6_4 | exon | 82501997 | 82502873 | 82501997 | ID=Msa0999930-mRNA-1:exon:15872;Parent=Msa0999930-mRNA-1 |
| chr6_4 | CDS | 82503598 | 82503606 | 82503598 | ID=Msa0999930-mRNA-1:cds;Parent=Msa0999930-mRNA-1 |
| chr6_4 | CDS | 82503062 | 82503162 | 82503062 | ID=Msa0999930-mRNA-1:cds;Parent=Msa0999930-mRNA-1 |
| chr6_4 | CDS | 82501997 | 82502873 | 82501997 | ID=Msa0999930-mRNA-1:cds;Parent=Msa0999930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
