Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003820 | RHN43992.1 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.65e-165 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003820 | A0A396GS93 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 7.89e-166 | 471 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1003820 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003820 | MtrunA17_Chr7g0214511 | 83.946 | 299 | 22 | 5 | 10 | 302 | 9 | 287 | 1.52e-169 | 471 |
| Msa1003820 | MtrunA17_Chr1g0174001 | 60.309 | 194 | 58 | 8 | 118 | 302 | 12 | 195 | 1.88e-63 | 198 |
| Msa1003820 | MtrunA17_Chr1g0169521 | 49.808 | 261 | 83 | 9 | 60 | 302 | 86 | 316 | 1.53e-61 | 197 |
| Msa1003820 | MtrunA17_Chr1g0169561 | 49.624 | 266 | 83 | 12 | 56 | 302 | 83 | 316 | 4.21e-60 | 194 |
| Msa1003820 | MtrunA17_Chr1g0193731 | 47.576 | 330 | 81 | 17 | 16 | 302 | 15 | 295 | 2.63e-58 | 189 |
| Msa1003820 | MtrunA17_Chr1g0180581 | 44.444 | 288 | 84 | 11 | 15 | 302 | 9 | 220 | 4.40e-51 | 167 |
| Msa1003820 | MtrunA17_Chr1g0174871 | 35.907 | 259 | 121 | 11 | 72 | 301 | 42 | 284 | 1.83e-22 | 94.7 |
| Msa1003820 | MtrunA17_Chr1g0174861 | 37.363 | 182 | 88 | 9 | 93 | 268 | 63 | 224 | 2.10e-20 | 88.2 |
| Msa1003820 | MtrunA17_Chr1g0180571 | 78.431 | 51 | 11 | 0 | 247 | 297 | 22 | 72 | 3.71e-19 | 82.0 |
| Msa1003820 | MtrunA17_Chr1g0172861 | 35.055 | 271 | 102 | 15 | 72 | 302 | 42 | 278 | 1.54e-16 | 78.2 |
| Msa1003820 | MtrunA17_Chr1g0172961 | 32.411 | 253 | 101 | 13 | 72 | 284 | 42 | 264 | 1.75e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAGGTGTTACTGAATT+AGG | 0.100666 | 7_1:-895582 | Msa1003820:CDS |
| TGAATCACCGTGGCGCTAAA+AGG | 0.215611 | 7_1:-895830 | Msa1003820:CDS |
| TCGACGCGGCCGGCGTTTCT+TGG | 0.252455 | 7_1:+895956 | None:intergenic |
| TTCTTGGTGTTGTAGAATAT+TGG | 0.276502 | 7_1:+895972 | None:intergenic |
| CTCTTCAATAGCATGATTAG+AGG | 0.355993 | 7_1:+895614 | None:intergenic |
| ATGAAGGTGTTACTGAATTA+GGG | 0.357850 | 7_1:-895581 | Msa1003820:CDS |
| TTCTGTTCTTGGTAATCATA+AGG | 0.363019 | 7_1:-896174 | Msa1003820:CDS |
| ATCGCTCCCTTCAAAATTCC+AGG | 0.381362 | 7_1:-896325 | Msa1003820:CDS |
| CAAAGCATTGAATGGACATA+AGG | 0.388435 | 7_1:-896069 | Msa1003820:CDS |
| TATATCTCGCGGAGGTTATG+AGG | 0.390309 | 7_1:-895874 | Msa1003820:CDS |
| AGTACTTTGAACAGTCAATA+TGG | 0.393472 | 7_1:+896000 | None:intergenic |
| AAAACTTTCTTGCAATATGA+TGG | 0.405590 | 7_1:-895805 | Msa1003820:CDS |
| GCATCATTAGTTGTTGAAGA+TGG | 0.412853 | 7_1:+896245 | None:intergenic |
| ACTTCTAACAAAGCATTGAA+TGG | 0.414800 | 7_1:-896077 | Msa1003820:CDS |
| ATAGCATGATTAGAGGTAGA+AGG | 0.440842 | 7_1:+895621 | None:intergenic |
| GAAGATGGTGGTGCAGTTTG+TGG | 0.454649 | 7_1:+896035 | None:intergenic |
| GAATAGGGTTTGAGTAATCA+AGG | 0.456225 | 7_1:+896285 | None:intergenic |
| AAAGCATTGAATGGACATAA+GGG | 0.470952 | 7_1:-896068 | Msa1003820:CDS |
| TTCTTCTTCTTCGACGCGGC+CGG | 0.486419 | 7_1:+895946 | None:intergenic |
| GAATCACCGTGGCGCTAAAA+GGG | 0.488695 | 7_1:-895829 | Msa1003820:CDS |
| TAATCAAGGAAACGGAAAGA+AGG | 0.496330 | 7_1:+896299 | None:intergenic |
| GTCAATATGGCTCTGTTCAA+AGG | 0.497478 | 7_1:+896013 | None:intergenic |
| TCTTCAACAACTAATGATGC+TGG | 0.499426 | 7_1:-896242 | Msa1003820:CDS |
| GGAGCGATGATAAACATCAT+TGG | 0.502169 | 7_1:+896340 | None:intergenic |
| GAAGAGAAGAAGATTAATGA+AGG | 0.510676 | 7_1:-895597 | Msa1003820:CDS |
| TCAAACATCACAAGATTGCA+AGG | 0.513757 | 7_1:-895646 | Msa1003820:CDS |
| CTCATGTGATGTTTGCAACA+AGG | 0.516766 | 7_1:-896105 | Msa1003820:CDS |
| TTGGTGTTGTAGAATATTGG+CGG | 0.527171 | 7_1:+895975 | None:intergenic |
| TTGAGGTTCAAGATTCCTAA+AGG | 0.528982 | 7_1:-895678 | Msa1003820:CDS |
| AAGATGGTGGTGCAGTTTGT+GGG | 0.535375 | 7_1:+896036 | None:intergenic |
| GAAACGGAAAGAAGGGTACC+TGG | 0.540917 | 7_1:+896307 | None:intergenic |
| TAGCCACAATGAAAAGAAGT+TGG | 0.545096 | 7_1:-895703 | Msa1003820:CDS |
| GGTTTGAGTAATCAAGGAAA+CGG | 0.550662 | 7_1:+896291 | None:intergenic |
| TTTGGTTCATGATCATGAGA+AGG | 0.562074 | 7_1:+896365 | None:intergenic |
| TCATGATCATGAGAAGGAGA+TGG | 0.576941 | 7_1:+896371 | None:intergenic |
| TGGCTCTGTTCAAAGGAAGA+TGG | 0.582600 | 7_1:+896020 | None:intergenic |
| AATCAAGGAAACGGAAAGAA+GGG | 0.583538 | 7_1:+896300 | None:intergenic |
| TCATCTTCAAAATCATCACT+TGG | 0.584649 | 7_1:+895522 | None:intergenic |
| CAAGGTGTGTTTCTAACAAG+TGG | 0.594003 | 7_1:-895753 | Msa1003820:CDS |
| ATGAAAAGAAGTTGGTGTTG+AGG | 0.594249 | 7_1:-895695 | Msa1003820:CDS |
| ACAACGTGAAGAAGATCGTA+TGG | 0.595118 | 7_1:-896208 | Msa1003820:CDS |
| ATATCTCGCGGAGGTTATGA+GGG | 0.614101 | 7_1:-895873 | Msa1003820:CDS |
| ACTTTGTTGCATATATCTCG+CGG | 0.675938 | 7_1:-895885 | Msa1003820:CDS |
| TCTACAACACCAAGAAACGC+CGG | 0.683622 | 7_1:-895965 | Msa1003820:CDS |
| TATCTTCTTCTTCTTCGACG+CGG | 0.720402 | 7_1:+895942 | None:intergenic |
| CTCTGTTCAAAGGAAGATGG+TGG | 0.725506 | 7_1:+896023 | None:intergenic |
| TTGTTGCATATATCTCGCGG+AGG | 0.742758 | 7_1:-895882 | Msa1003820:CDS |
| AATATCGATGTGAATCACCG+TGG | 0.797456 | 7_1:-895840 | Msa1003820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_1:895725-895744 | Msa1003820:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_1:895725-895744 | Msa1003820:CDS | 20.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_1:895566-895585 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_1:895643-895662 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_1:895644-895663 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr7_1:896105-896124 | Msa1003820:CDS | 25.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_1:895566-895585 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_1:895643-895662 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_1:895644-895663 | None:intergenic | 25.0% |
| ! | AAAACTTTCTTGCAATATGA+TGG | - | chr7_1:896105-896124 | Msa1003820:CDS | 25.0% |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_1:895736-895755 | Msa1003820:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_1:895833-895852 | Msa1003820:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_1:895842-895861 | Msa1003820:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr7_1:895913-895932 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_1:895941-895960 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_1:896250-896269 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_1:896313-896332 | Msa1003820:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_1:896328-896347 | Msa1003820:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_1:896329-896348 | Msa1003820:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_1:896391-896410 | None:intergenic | 30.0% | |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_1:895736-895755 | Msa1003820:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_1:895833-895852 | Msa1003820:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_1:895842-895861 | Msa1003820:CDS | 30.0% |
| AGTACTTTGAACAGTCAATA+TGG | + | chr7_1:895913-895932 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_1:895941-895960 | None:intergenic | 30.0% |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_1:896250-896269 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_1:896313-896332 | Msa1003820:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_1:896328-896347 | Msa1003820:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_1:896329-896348 | Msa1003820:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_1:896391-896410 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_1:895548-895567 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_1:895613-895632 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_1:895614-895633 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_1:895622-895641 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_1:895628-895647 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_1:895668-895687 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_1:895668-895687 | Msa1003820:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_1:895841-895860 | Msa1003820:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_1:895938-895957 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_1:896025-896044 | Msa1003820:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr7_1:896132-896151 | Msa1003820:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr7_1:896139-896158 | Msa1003820:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr7_1:896207-896226 | Msa1003820:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr7_1:896213-896232 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr7_1:896215-896234 | Msa1003820:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_1:896232-896251 | Msa1003820:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_1:896264-896283 | Msa1003820:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_1:896292-896311 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_1:896299-896318 | None:intergenic | 35.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_1:895548-895567 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_1:895613-895632 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_1:895614-895633 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_1:895622-895641 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_1:895628-895647 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_1:895668-895687 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_1:895668-895687 | Msa1003820:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_1:895841-895860 | Msa1003820:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_1:895938-895957 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_1:896025-896044 | Msa1003820:CDS | 35.0% | |
| TGATGAGAAGAAGAAGAAGA+AGG | - | chr7_1:896132-896151 | Msa1003820:CDS | 35.0% | |
| AAGAAGAAGAAGAAGGAACA+AGG | - | chr7_1:896139-896158 | Msa1003820:CDS | 35.0% | |
| TAGCCACAATGAAAAGAAGT+TGG | - | chr7_1:896207-896226 | Msa1003820:CDS | 35.0% | |
| ! | ACACCAACTTCTTTTCATTG+TGG | + | chr7_1:896213-896232 | None:intergenic | 35.0% |
| !! | ATGAAAAGAAGTTGGTGTTG+AGG | - | chr7_1:896215-896234 | Msa1003820:CDS | 35.0% |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_1:896232-896251 | Msa1003820:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_1:896264-896283 | Msa1003820:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_1:896292-896311 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_1:896299-896318 | None:intergenic | 35.0% | |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_1:895542-895561 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_1:895573-895592 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_1:895594-895613 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_1:895595-895614 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_1:895702-895721 | Msa1003820:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_1:895805-895824 | Msa1003820:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr7_1:895900-895919 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr7_1:895971-895990 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr7_1:896070-896089 | Msa1003820:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr7_1:896157-896176 | Msa1003820:CDS | 40.0% |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_1:895542-895561 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_1:895573-895592 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_1:895594-895613 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_1:895595-895614 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_1:895702-895721 | Msa1003820:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_1:895805-895824 | Msa1003820:CDS | 40.0% | |
| ! | GTCAATATGGCTCTGTTCAA+AGG | + | chr7_1:895900-895919 | None:intergenic | 40.0% |
| TATCTTCTTCTTCTTCGACG+CGG | + | chr7_1:895971-895990 | None:intergenic | 40.0% | |
| AATATCGATGTGAATCACCG+TGG | - | chr7_1:896070-896089 | Msa1003820:CDS | 40.0% | |
| ! | CAAGGTGTGTTTCTAACAAG+TGG | - | chr7_1:896157-896176 | Msa1003820:CDS | 40.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_1:895585-895604 | Msa1003820:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_1:895877-895896 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_1:895890-895909 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_1:895893-895912 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr7_1:895945-895964 | Msa1003820:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_1:896028-896047 | Msa1003820:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_1:896036-896055 | Msa1003820:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_1:896037-896056 | Msa1003820:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_1:896090-896109 | None:intergenic | 45.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_1:895585-895604 | Msa1003820:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_1:895877-895896 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_1:895890-895909 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_1:895893-895912 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGC+CGG | - | chr7_1:895945-895964 | Msa1003820:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_1:896028-896047 | Msa1003820:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_1:896036-896055 | Msa1003820:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_1:896037-896056 | Msa1003820:CDS | 45.0% | |
| ! | GTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_1:896090-896109 | None:intergenic | 45.0% |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_1:895606-895625 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_1:895878-895897 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_1:896080-896099 | Msa1003820:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_1:896081-896100 | Msa1003820:CDS | 50.0% | |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_1:895606-895625 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_1:895878-895897 | None:intergenic | 50.0% |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_1:896080-896099 | Msa1003820:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_1:896081-896100 | Msa1003820:CDS | 50.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr7_1:895967-895986 | None:intergenic | 55.0% | |
| TTCTTCTTCTTCGACGCGGC+CGG | + | chr7_1:895967-895986 | None:intergenic | 55.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr7_1:895957-895976 | None:intergenic | 70.0% | |
| TCGACGCGGCCGGCGTTTCT+TGG | + | chr7_1:895957-895976 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 895512 | 896420 | 895512 | ID=Msa1003820;Name=Msa1003820 |
| chr7_1 | mRNA | 895512 | 896420 | 895512 | ID=Msa1003820-mRNA-1;Parent=Msa1003820;Name=Msa1003820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|302 |
| chr7_1 | exon | 895512 | 896420 | 895512 | ID=Msa1003820-mRNA-1:exon:434;Parent=Msa1003820-mRNA-1 |
| chr7_1 | CDS | 895512 | 896420 | 895512 | ID=Msa1003820-mRNA-1:cds;Parent=Msa1003820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
