Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003850 | RHN43992.1 | 83.838 | 297 | 23 | 5 | 6 | 295 | 9 | 287 | 8.06e-164 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003850 | A0A396GS93 | 83.838 | 297 | 23 | 5 | 6 | 295 | 9 | 287 | 3.85e-164 | 466 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1003850 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003850 | MtrunA17_Chr7g0214511 | 83.838 | 297 | 23 | 5 | 6 | 295 | 9 | 287 | 7.42e-168 | 466 |
| Msa1003850 | MtrunA17_Chr1g0174001 | 60.104 | 193 | 59 | 7 | 112 | 295 | 12 | 195 | 2.18e-64 | 201 |
| Msa1003850 | MtrunA17_Chr1g0169521 | 50.584 | 257 | 84 | 7 | 56 | 295 | 86 | 316 | 7.72e-63 | 201 |
| Msa1003850 | MtrunA17_Chr1g0169561 | 50.382 | 262 | 84 | 10 | 52 | 295 | 83 | 316 | 3.05e-61 | 197 |
| Msa1003850 | MtrunA17_Chr1g0193731 | 47.112 | 329 | 81 | 17 | 12 | 295 | 15 | 295 | 1.24e-57 | 187 |
| Msa1003850 | MtrunA17_Chr1g0180581 | 45.614 | 285 | 82 | 12 | 11 | 295 | 9 | 220 | 5.80e-51 | 167 |
| Msa1003850 | MtrunA17_Chr1g0174871 | 36.047 | 258 | 119 | 11 | 68 | 294 | 42 | 284 | 2.97e-23 | 96.7 |
| Msa1003850 | MtrunA17_Chr1g0174861 | 36.413 | 184 | 92 | 7 | 84 | 261 | 60 | 224 | 1.27e-21 | 91.3 |
| Msa1003850 | MtrunA17_Chr1g0180571 | 56.627 | 83 | 13 | 1 | 208 | 290 | 13 | 72 | 2.63e-19 | 82.4 |
| Msa1003850 | MtrunA17_Chr1g0172861 | 35.185 | 270 | 100 | 15 | 68 | 295 | 42 | 278 | 3.76e-17 | 79.7 |
| Msa1003850 | MtrunA17_Chr1g0172961 | 32.540 | 252 | 99 | 13 | 68 | 277 | 42 | 264 | 1.56e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAGGTGTTACTGAATT+AGG | 0.100666 | 7_1:-926863 | Msa1003850:CDS |
| TGAATCACCGTGGCGCTAAA+AGG | 0.215611 | 7_1:-927105 | Msa1003850:CDS |
| TCGACGCGGCCGCCGTTTCT+TGG | 0.252455 | 7_1:+927234 | None:intergenic |
| TTCTTGGTGTTGTAGAATAT+TGG | 0.276502 | 7_1:+927250 | None:intergenic |
| AGTACTTTGAACAGTCAATT+TGG | 0.281486 | 7_1:+927278 | None:intergenic |
| CTCTTCAATAGCATGATTAG+AGG | 0.355993 | 7_1:+926895 | None:intergenic |
| ATGAAGGTGTTACTGAATTA+GGG | 0.357850 | 7_1:-926862 | Msa1003850:CDS |
| TTCTGTTCTTGGTAATCATA+AGG | 0.363019 | 7_1:-927446 | Msa1003850:CDS |
| ATCGCTCCCTTCAAAATTCC+AGG | 0.381362 | 7_1:-927597 | Msa1003850:CDS |
| CAAAGCATTGAATGGACATA+AGG | 0.388435 | 7_1:-927347 | Msa1003850:CDS |
| TATATCTCGCGGAGGTTATG+AGG | 0.390309 | 7_1:-927149 | Msa1003850:CDS |
| GCATCATTAGTTGTTGAAGA+TGG | 0.413813 | 7_1:+927517 | None:intergenic |
| ACTTCTAACAAAGCATTGAA+TGG | 0.414800 | 7_1:-927355 | Msa1003850:CDS |
| ATAGCATGATTAGAGGTAGA+AGG | 0.440842 | 7_1:+926902 | None:intergenic |
| GAAGATGGTGGTGCAGTTTG+TGG | 0.454649 | 7_1:+927313 | None:intergenic |
| GAATAGGGTTTGAGTAATCA+AGG | 0.456225 | 7_1:+927557 | None:intergenic |
| CATCATTAGTTGTTGAAGAT+GGG | 0.456727 | 7_1:+927518 | None:intergenic |
| GTCAATTTGGCTCTGTTCAA+AGG | 0.462178 | 7_1:+927291 | None:intergenic |
| AAAGCATTGAATGGACATAA+GGG | 0.470952 | 7_1:-927346 | Msa1003850:CDS |
| GAATCACCGTGGCGCTAAAA+GGG | 0.488695 | 7_1:-927104 | Msa1003850:CDS |
| TAATCAAGGAAACGGAAAGA+AGG | 0.496330 | 7_1:+927571 | None:intergenic |
| TCTTCAACAACTAATGATGC+TGG | 0.499426 | 7_1:-927514 | Msa1003850:CDS |
| GGAGCGATGATAAACATCAT+TGG | 0.502169 | 7_1:+927612 | None:intergenic |
| GAAGAGAAGAAGATTAATGA+AGG | 0.510676 | 7_1:-926878 | Msa1003850:CDS |
| TCAAACATCACAAGATTGCA+AGG | 0.513757 | 7_1:-926927 | Msa1003850:CDS |
| CTCATGTGATGTTTGCAACA+AGG | 0.516766 | 7_1:-927383 | Msa1003850:CDS |
| TGGCTCTGTTCAAAGGAAGA+TGG | 0.523783 | 7_1:+927298 | None:intergenic |
| TTGGTGTTGTAGAATATTGG+CGG | 0.527171 | 7_1:+927253 | None:intergenic |
| TTGAGGTTCAAGATTCCTAA+AGG | 0.528982 | 7_1:-926959 | Msa1003850:CDS |
| AAGATGGTGGTGCAGTTTGT+GGG | 0.535375 | 7_1:+927314 | None:intergenic |
| GGCCGCGTCGAAGAAGAAGA+AGG | 0.538757 | 7_1:-927222 | Msa1003850:CDS |
| GAAACGGAAAGAAGGGTACC+TGG | 0.540917 | 7_1:+927579 | None:intergenic |
| GAGAAGAAGAAGAAGGAACA+AGG | 0.548147 | 7_1:-927052 | Msa1003850:CDS |
| GGTTTGAGTAATCAAGGAAA+CGG | 0.550662 | 7_1:+927563 | None:intergenic |
| GGATGATGAGAAGAAGAAGA+AGG | 0.553028 | 7_1:-927059 | Msa1003850:CDS |
| TTTGGTTCATGATCATGAGA+AGG | 0.562074 | 7_1:+927637 | None:intergenic |
| TAGCCACAACGAAAAGAAGT+TGG | 0.564164 | 7_1:-926984 | Msa1003850:CDS |
| TATTCTACAACACCAAGAAA+CGG | 0.569291 | 7_1:-927246 | Msa1003850:CDS |
| TCATGATCATGAGAAGGAGA+TGG | 0.576941 | 7_1:+927643 | None:intergenic |
| AATCAAGGAAACGGAAAGAA+GGG | 0.583538 | 7_1:+927572 | None:intergenic |
| TCATCTTCAAAATCATCACT+TGG | 0.584649 | 7_1:+926803 | None:intergenic |
| ACAACGTGAAGAAGATCGTA+TGG | 0.595118 | 7_1:-927480 | Msa1003850:CDS |
| ATATCTCGCGGAGGTTATGA+GGG | 0.614101 | 7_1:-927148 | Msa1003850:CDS |
| CTCCTTCTTCTTCTTCGACG+CGG | 0.618622 | 7_1:+927220 | None:intergenic |
| ACGAAAAGAAGTTGGTGTTG+AGG | 0.632445 | 7_1:-926976 | Msa1003850:CDS |
| ACTTTGTTGCATATATCTCG+CGG | 0.675938 | 7_1:-927160 | Msa1003850:CDS |
| CAAGGTGTGTTGCTAACAAG+TGG | 0.689736 | 7_1:-927034 | Msa1003850:CDS |
| CTCTGTTCAAAGGAAGATGG+TGG | 0.704608 | 7_1:+927301 | None:intergenic |
| TCTACAACACCAAGAAACGG+CGG | 0.738098 | 7_1:-927243 | Msa1003850:CDS |
| TTGTTGCATATATCTCGCGG+AGG | 0.742758 | 7_1:-927157 | Msa1003850:CDS |
| AATATCGATGTGAATCACCG+TGG | 0.797456 | 7_1:-927115 | Msa1003850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_1:926994-927013 | Msa1003850:CDS | 20.0% |
| !! | AAAAATTTCTTGCAATATGA+TGG | - | chr7_1:927371-927390 | Msa1003850:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTGTTCT+TGG | - | chr7_1:926994-927013 | Msa1003850:CDS | 20.0% |
| !! | AAAAATTTCTTGCAATATGA+TGG | - | chr7_1:927371-927390 | Msa1003850:CDS | 20.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_1:926835-926854 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_1:926912-926931 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_1:926913-926932 | None:intergenic | 25.0% |
| !!! | TGATAAACATCATTGGTTTT+TGG | + | chr7_1:926835-926854 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTCATTCTGAATA+GGG | + | chr7_1:926912-926931 | None:intergenic | 25.0% |
| !!! | TTTTTGAGTTCATTCTGAAT+AGG | + | chr7_1:926913-926932 | None:intergenic | 25.0% |
| CATCATTAGTTGTTGAAGAT+GGG | + | chr7_1:926936-926955 | None:intergenic | 30.0% | |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_1:927005-927024 | Msa1003850:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_1:927096-927115 | Msa1003850:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_1:927105-927124 | Msa1003850:CDS | 30.0% |
| AGTACTTTGAACAGTCAATT+TGG | + | chr7_1:927176-927195 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_1:927204-927223 | None:intergenic | 30.0% |
| TATTCTACAACACCAAGAAA+CGG | - | chr7_1:927205-927224 | Msa1003850:CDS | 30.0% | |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_1:927510-927529 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_1:927573-927592 | Msa1003850:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_1:927588-927607 | Msa1003850:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_1:927589-927608 | Msa1003850:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_1:927651-927670 | None:intergenic | 30.0% | |
| CATCATTAGTTGTTGAAGAT+GGG | + | chr7_1:926936-926955 | None:intergenic | 30.0% | |
| ! | TTCTGTTCTTGGTAATCATA+AGG | - | chr7_1:927005-927024 | Msa1003850:CDS | 30.0% |
| !! | ACTTCTAACAAAGCATTGAA+TGG | - | chr7_1:927096-927115 | Msa1003850:CDS | 30.0% |
| !! | AAAGCATTGAATGGACATAA+GGG | - | chr7_1:927105-927124 | Msa1003850:CDS | 30.0% |
| AGTACTTTGAACAGTCAATT+TGG | + | chr7_1:927176-927195 | None:intergenic | 30.0% | |
| !! | TTCTTGGTGTTGTAGAATAT+TGG | + | chr7_1:927204-927223 | None:intergenic | 30.0% |
| TATTCTACAACACCAAGAAA+CGG | - | chr7_1:927205-927224 | Msa1003850:CDS | 30.0% | |
| GTTTGAAAAATCTTGCCTTT+AGG | + | chr7_1:927510-927529 | None:intergenic | 30.0% | |
| GAAGAGAAGAAGATTAATGA+AGG | - | chr7_1:927573-927592 | Msa1003850:CDS | 30.0% | |
| !! | AATGAAGGTGTTACTGAATT+AGG | - | chr7_1:927588-927607 | Msa1003850:CDS | 30.0% |
| !! | ATGAAGGTGTTACTGAATTA+GGG | - | chr7_1:927589-927608 | Msa1003850:CDS | 30.0% |
| TCATCTTCAAAATCATCACT+TGG | + | chr7_1:927651-927670 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_1:926817-926836 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_1:926882-926901 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_1:926883-926902 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_1:926891-926910 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_1:926897-926916 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_1:926937-926956 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_1:926937-926956 | Msa1003850:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_1:927104-927123 | Msa1003850:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_1:927201-927220 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_1:927291-927310 | Msa1003850:CDS | 35.0% | |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_1:927492-927511 | Msa1003850:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_1:927524-927543 | Msa1003850:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_1:927552-927571 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_1:927559-927578 | None:intergenic | 35.0% | |
| ! | TTTGGTTCATGATCATGAGA+AGG | + | chr7_1:926817-926836 | None:intergenic | 35.0% |
| AATCAAGGAAACGGAAAGAA+GGG | + | chr7_1:926882-926901 | None:intergenic | 35.0% | |
| TAATCAAGGAAACGGAAAGA+AGG | + | chr7_1:926883-926902 | None:intergenic | 35.0% | |
| GGTTTGAGTAATCAAGGAAA+CGG | + | chr7_1:926891-926910 | None:intergenic | 35.0% | |
| GAATAGGGTTTGAGTAATCA+AGG | + | chr7_1:926897-926916 | None:intergenic | 35.0% | |
| GCATCATTAGTTGTTGAAGA+TGG | + | chr7_1:926937-926956 | None:intergenic | 35.0% | |
| TCTTCAACAACTAATGATGC+TGG | - | chr7_1:926937-926956 | Msa1003850:CDS | 35.0% | |
| !! | CAAAGCATTGAATGGACATA+AGG | - | chr7_1:927104-927123 | Msa1003850:CDS | 35.0% |
| !! | TTGGTGTTGTAGAATATTGG+CGG | + | chr7_1:927201-927220 | None:intergenic | 35.0% |
| ACTTTGTTGCATATATCTCG+CGG | - | chr7_1:927291-927310 | Msa1003850:CDS | 35.0% | |
| TTGAGGTTCAAGATTCCTAA+AGG | - | chr7_1:927492-927511 | Msa1003850:CDS | 35.0% | |
| TCAAACATCACAAGATTGCA+AGG | - | chr7_1:927524-927543 | Msa1003850:CDS | 35.0% | |
| ATAGCATGATTAGAGGTAGA+AGG | + | chr7_1:927552-927571 | None:intergenic | 35.0% | |
| CTCTTCAATAGCATGATTAG+AGG | + | chr7_1:927559-927578 | None:intergenic | 35.0% | |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_1:926811-926830 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_1:926842-926861 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_1:926863-926882 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_1:926864-926883 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_1:926971-926990 | Msa1003850:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_1:927068-927087 | Msa1003850:CDS | 40.0% | |
| !! | GTCAATTTGGCTCTGTTCAA+AGG | + | chr7_1:927163-927182 | None:intergenic | 40.0% |
| AATATCGATGTGAATCACCG+TGG | - | chr7_1:927336-927355 | Msa1003850:CDS | 40.0% | |
| !!! | TTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_1:927356-927375 | None:intergenic | 40.0% |
| GGATGATGAGAAGAAGAAGA+AGG | - | chr7_1:927392-927411 | Msa1003850:CDS | 40.0% | |
| GAGAAGAAGAAGAAGGAACA+AGG | - | chr7_1:927399-927418 | Msa1003850:CDS | 40.0% | |
| TAGCCACAACGAAAAGAAGT+TGG | - | chr7_1:927467-927486 | Msa1003850:CDS | 40.0% | |
| ! | ACACCAACTTCTTTTCGTTG+TGG | + | chr7_1:927473-927492 | None:intergenic | 40.0% |
| !! | ACGAAAAGAAGTTGGTGTTG+AGG | - | chr7_1:927475-927494 | Msa1003850:CDS | 40.0% |
| TCATGATCATGAGAAGGAGA+TGG | + | chr7_1:926811-926830 | None:intergenic | 40.0% | |
| GGAGCGATGATAAACATCAT+TGG | + | chr7_1:926842-926861 | None:intergenic | 40.0% | |
| !! | AGGGTACCTGGAATTTTGAA+GGG | + | chr7_1:926863-926882 | None:intergenic | 40.0% |
| !!! | AAGGGTACCTGGAATTTTGA+AGG | + | chr7_1:926864-926883 | None:intergenic | 40.0% |
| ACAACGTGAAGAAGATCGTA+TGG | - | chr7_1:926971-926990 | Msa1003850:CDS | 40.0% | |
| CTCATGTGATGTTTGCAACA+AGG | - | chr7_1:927068-927087 | Msa1003850:CDS | 40.0% | |
| !! | GTCAATTTGGCTCTGTTCAA+AGG | + | chr7_1:927163-927182 | None:intergenic | 40.0% |
| AATATCGATGTGAATCACCG+TGG | - | chr7_1:927336-927355 | Msa1003850:CDS | 40.0% | |
| !!! | TTTTTTCCCTTTTAGCGCCA+CGG | + | chr7_1:927356-927375 | None:intergenic | 40.0% |
| GGATGATGAGAAGAAGAAGA+AGG | - | chr7_1:927392-927411 | Msa1003850:CDS | 40.0% | |
| GAGAAGAAGAAGAAGGAACA+AGG | - | chr7_1:927399-927418 | Msa1003850:CDS | 40.0% | |
| TAGCCACAACGAAAAGAAGT+TGG | - | chr7_1:927467-927486 | Msa1003850:CDS | 40.0% | |
| ! | ACACCAACTTCTTTTCGTTG+TGG | + | chr7_1:927473-927492 | None:intergenic | 40.0% |
| !! | ACGAAAAGAAGTTGGTGTTG+AGG | - | chr7_1:927475-927494 | Msa1003850:CDS | 40.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_1:926854-926873 | Msa1003850:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_1:927140-927159 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_1:927153-927172 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_1:927156-927175 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGG+CGG | - | chr7_1:927208-927227 | Msa1003850:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_1:927294-927313 | Msa1003850:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_1:927302-927321 | Msa1003850:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_1:927303-927322 | Msa1003850:CDS | 45.0% | |
| ! | CAAGGTGTGTTGCTAACAAG+TGG | - | chr7_1:927417-927436 | Msa1003850:CDS | 45.0% |
| ATCGCTCCCTTCAAAATTCC+AGG | - | chr7_1:926854-926873 | Msa1003850:CDS | 45.0% | |
| ! | AAGATGGTGGTGCAGTTTGT+GGG | + | chr7_1:927140-927159 | None:intergenic | 45.0% |
| CTCTGTTCAAAGGAAGATGG+TGG | + | chr7_1:927153-927172 | None:intergenic | 45.0% | |
| ! | TGGCTCTGTTCAAAGGAAGA+TGG | + | chr7_1:927156-927175 | None:intergenic | 45.0% |
| TCTACAACACCAAGAAACGG+CGG | - | chr7_1:927208-927227 | Msa1003850:CDS | 45.0% | |
| TTGTTGCATATATCTCGCGG+AGG | - | chr7_1:927294-927313 | Msa1003850:CDS | 45.0% | |
| TATATCTCGCGGAGGTTATG+AGG | - | chr7_1:927302-927321 | Msa1003850:CDS | 45.0% | |
| ATATCTCGCGGAGGTTATGA+GGG | - | chr7_1:927303-927322 | Msa1003850:CDS | 45.0% | |
| ! | CAAGGTGTGTTGCTAACAAG+TGG | - | chr7_1:927417-927436 | Msa1003850:CDS | 45.0% |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_1:926875-926894 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_1:927141-927160 | None:intergenic | 50.0% |
| CTCCTTCTTCTTCTTCGACG+CGG | + | chr7_1:927234-927253 | None:intergenic | 50.0% | |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_1:927346-927365 | Msa1003850:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_1:927347-927366 | Msa1003850:CDS | 50.0% | |
| !! | GAAACGGAAAGAAGGGTACC+TGG | + | chr7_1:926875-926894 | None:intergenic | 50.0% |
| ! | GAAGATGGTGGTGCAGTTTG+TGG | + | chr7_1:927141-927160 | None:intergenic | 50.0% |
| CTCCTTCTTCTTCTTCGACG+CGG | + | chr7_1:927234-927253 | None:intergenic | 50.0% | |
| TGAATCACCGTGGCGCTAAA+AGG | - | chr7_1:927346-927365 | Msa1003850:CDS | 50.0% | |
| GAATCACCGTGGCGCTAAAA+GGG | - | chr7_1:927347-927366 | Msa1003850:CDS | 50.0% | |
| GGCCGCGTCGAAGAAGAAGA+AGG | - | chr7_1:927229-927248 | Msa1003850:CDS | 60.0% | |
| GGCCGCGTCGAAGAAGAAGA+AGG | - | chr7_1:927229-927248 | Msa1003850:CDS | 60.0% | |
| TCGACGCGGCCGCCGTTTCT+TGG | + | chr7_1:927220-927239 | None:intergenic | 70.0% | |
| TCGACGCGGCCGCCGTTTCT+TGG | + | chr7_1:927220-927239 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 926793 | 927680 | 926793 | ID=Msa1003850;Name=Msa1003850 |
| chr7_1 | mRNA | 926793 | 927680 | 926793 | ID=Msa1003850-mRNA-1;Parent=Msa1003850;Name=Msa1003850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|295 |
| chr7_1 | exon | 926793 | 927680 | 926793 | ID=Msa1003850-mRNA-1:exon:435;Parent=Msa1003850-mRNA-1 |
| chr7_1 | CDS | 926793 | 927680 | 926793 | ID=Msa1003850-mRNA-1:cds;Parent=Msa1003850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
