AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1003870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1003870 MtrunA17_Chr7g0214531 100.000 599 0 0 1 599 1 599 0.0 1258
Msa1003870 MtrunA17_Chr1g0213321 85.572 603 78 2 1 599 79 676 0.0 1105
Msa1003870 MtrunA17_Chr1g0146301 78.869 601 116 3 3 598 89 683 0.0 1019
Msa1003870 MtrunA17_Chr7g0253211 79.595 593 120 1 7 599 294 885 0.0 1018
Msa1003870 MtrunA17_Chr3g0140431 77.796 599 123 2 4 598 5 597 0.0 1010
Msa1003870 MtrunA17_Chr8g0340491 72.987 596 158 3 6 599 97 691 0.0 921
Msa1003870 MtrunA17_Chr1g0166821 39.100 289 157 6 31 316 6 278 4.64e-60 207
Msa1003870 MtrunA17_Chr2g0329981 38.710 279 154 5 37 312 9 273 6.96e-60 207
Msa1003870 MtrunA17_Chr4g0071031 38.351 279 155 5 37 312 9 273 8.02e-60 206
Msa1003870 MtrunA17_Chr2g0299661 37.993 279 156 5 37 312 9 273 2.24e-59 205
Msa1003870 MtrunA17_Chr7g0261501 38.516 283 157 5 37 316 9 277 5.50e-59 204
Msa1003870 MtrunA17_Chr1g0187571 38.754 289 158 6 31 316 6 278 3.83e-58 202
Msa1003870 MtrunA17_Chr1g0183631 37.716 289 161 6 31 316 5 277 1.53e-57 200
Msa1003870 MtrunA17_Chr8g0342821 37.276 279 157 6 37 312 9 272 6.67e-57 199
Msa1003870 MtrunA17_Chr6g0486611 36.268 284 164 5 37 317 9 278 1.62e-55 193
Msa1003870 MtrunA17_Chr8g0390211 36.735 294 166 7 27 317 2 278 5.46e-55 192
Msa1003870 MtrunA17_Chr1g0167261 36.860 293 164 6 29 316 4 280 2.68e-54 188
Msa1003870 MtrunA17_Chr1g0146151 35.439 285 165 6 31 312 5 273 6.24e-53 186
Msa1003870 MtrunA17_Chr3g0140071 35.088 285 166 6 31 312 5 273 8.81e-53 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1003870 AT3G13670.1 85.050 602 84 2 1 598 103 702 0.0 1098
Msa1003870 AT2G25760.1 77.537 601 126 4 3 598 76 672 0.0 1011
Msa1003870 AT2G25760.2 77.318 604 125 6 3 598 76 675 0.0 1004
Msa1003870 AT5G18190.2 76.897 593 136 1 7 599 100 691 0.0 994
Msa1003870 AT5G18190.1 76.897 593 136 1 7 599 100 691 0.0 994
Msa1003870 AT3G03940.1 76.728 593 137 1 7 599 110 701 0.0 994
Msa1003870 AT3G03930.1 65.660 265 82 2 343 598 23 287 4.89e-124 367
Msa1003870 AT5G44100.1 38.408 289 159 6 31 316 5 277 1.46e-59 206
Msa1003870 AT5G44100.2 38.408 289 159 6 31 316 5 277 1.46e-59 206
Msa1003870 AT2G19470.1 38.516 283 157 5 37 316 9 277 1.63e-59 205
Msa1003870 AT1G03930.1 38.596 285 156 6 31 312 5 273 1.75e-59 206
Msa1003870 AT3G23340.1 38.754 289 158 6 31 316 5 277 4.58e-59 204
Msa1003870 AT4G14340.2 38.408 289 159 6 31 316 11 283 1.23e-58 201
Msa1003870 AT4G28540.1 38.062 289 160 6 31 316 9 281 1.53e-58 203
Msa1003870 AT4G26100.1 36.749 283 162 5 37 316 9 277 3.67e-58 202
Msa1003870 AT4G14340.1 38.408 289 159 6 31 316 11 283 3.77e-58 202
Msa1003870 AT4G28860.2 37.543 293 163 7 27 316 2 277 3.70e-57 197
Msa1003870 AT4G28860.1 37.543 293 163 7 27 316 2 277 1.47e-56 196
Msa1003870 AT1G04440.1 38.062 289 160 6 31 316 5 277 1.55e-56 198
Msa1003870 AT5G43320.1 38.062 289 160 6 31 316 5 277 1.81e-56 198
Msa1003870 AT4G28880.3 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1003870 AT4G28880.2 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1003870 AT4G28880.1 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1003870 AT4G28880.4 37.884 293 162 7 27 316 2 277 1.85e-56 196
Msa1003870 AT1G72710.1 37.276 279 157 6 37 312 9 272 2.02e-56 197
Msa1003870 AT5G57015.1 36.042 283 164 5 37 316 9 277 2.86e-56 196
Msa1003870 AT5G43320.2 38.062 289 160 6 31 316 5 277 2.96e-56 194
Msa1003870 AT5G43320.3 38.062 289 160 6 31 316 5 277 2.96e-56 194
Msa1003870 AT3G23340.2 39.245 265 151 5 57 316 4 263 1.39e-53 189
Msa1003870 AT4G08800.1 32.509 283 142 6 37 316 9 245 2.56e-42 154

Find 207 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTGGTAGGTTGAATT+TGG 0.163094 7_1:-936090 None:intergenic
CAATCTCTGGGCACTTATTA+TGG 0.176547 7_1:+940933 Msa1003870:CDS
TAGGTTGAATTTGGAGAATT+AGG 0.195629 7_1:-936081 None:intergenic
CTTCCTTTATAATGTACTTT+AGG 0.233162 7_1:-937882 None:intergenic
CATCTCTACCTTTGCTTCAT+TGG 0.235235 7_1:-939909 None:intergenic
TGGCTTCTTGTTCCAATCTC+TGG 0.237696 7_1:+940920 Msa1003870:CDS
AAAAGAAACCTGAACATATC+AGG 0.258582 7_1:-939147 None:intergenic
TGAGCACCTTCAGTATTAAT+TGG 0.274374 7_1:-939649 None:intergenic
GGTGGTAATGACCGTCTTAA+TGG 0.277319 7_1:+937520 Msa1003870:CDS
AAACTTGGCAAAGGTGGATT+TGG 0.289497 7_1:+937469 Msa1003870:CDS
TCTTCTCTTACCAAGTTATC+AGG 0.290272 7_1:-936373 None:intergenic
TGCAAGTGTTCATGCTCATT+TGG 0.304706 7_1:+939248 Msa1003870:CDS
GAATTTGGAGAATTAGGGTT+AGG 0.322608 7_1:-936075 None:intergenic
AACAGTAAAGGTTGCAACTA+TGG 0.325296 7_1:+937670 Msa1003870:CDS
GTTACCATGGCAAGGTTATC+AGG 0.332076 7_1:+939341 Msa1003870:CDS
AACCATTATCCCATCGTCTA+TGG 0.333296 7_1:-942915 None:intergenic
TTTCTTGTTGATCTCGGATT+AGG 0.333361 7_1:+938990 Msa1003870:CDS
GTCCAAGCTTGTGGGATGTT+TGG 0.336979 7_1:+938034 Msa1003870:CDS
TCTATAGCTGGGGTTACTAA+TGG 0.339143 7_1:+941152 Msa1003870:CDS
AATTAGACCTACATTTAGTT+AGG 0.344222 7_1:-943504 None:intergenic
CTTATTATGGATGCTGGAAC+TGG 0.352603 7_1:+940946 Msa1003870:CDS
GGCTTCTTGTTCCAATCTCT+GGG 0.354817 7_1:+940921 Msa1003870:CDS
TTTGTTGGTCGTCGAGTAAC+CGG 0.359465 7_1:+937499 Msa1003870:CDS
TTCTTCTCTTGTGCTGTACC+TGG 0.364237 7_1:-938963 None:intergenic
ATTGGCCGCAGTGCAGGATT+TGG 0.366177 7_1:-939631 None:intergenic
TACCTTGCTTGCTTGTGCTA+TGG 0.369695 7_1:+943170 Msa1003870:CDS
CATAATAAGTGCCCAGAGAT+TGG 0.371273 7_1:-940932 None:intergenic
GACGATGGGATAATGGTTAC+AGG 0.373311 7_1:+942920 Msa1003870:CDS
CCCTCTTTGGGTGGTGGATG+TGG 0.374034 7_1:+943448 Msa1003870:three_prime_UTR
AGCAATGCATGCCACCATTT+CGG 0.376237 7_1:-938752 None:intergenic
ACCTTGCTTGCTTGTGCTAT+GGG 0.376860 7_1:+943171 Msa1003870:CDS
CCGTGATAGCGGCACAAGTT+TGG 0.378481 7_1:-936303 None:intergenic
GGCCACTGCTGGAAGTCGTT+GGG 0.383031 7_1:+941994 Msa1003870:CDS
AGGTTGAATTTGGAGAATTA+GGG 0.387890 7_1:-936080 None:intergenic
GCAAGTGTTCATGCTCATTT+GGG 0.388698 7_1:+939249 Msa1003870:CDS
CAGAAGCAGCATAGCATCTC+AGG 0.394079 7_1:-939505 None:intergenic
AATGTATAAGTTTGTGTGTA+AGG 0.395749 7_1:+943367 Msa1003870:three_prime_UTR
CTTCTTGTTTATCCATTTGA+AGG 0.400317 7_1:-941942 None:intergenic
TATTACATTACTTCTATAGC+TGG 0.401862 7_1:+941140 Msa1003870:CDS
ATTTCCAAGCACGCATGTTA+AGG 0.407208 7_1:+943044 Msa1003870:CDS
ATCCATAGACGATGGGATAA+TGG 0.409318 7_1:+942913 Msa1003870:CDS
ATACCTAAAGTACATTATAA+AGG 0.411632 7_1:+937879 Msa1003870:CDS
GGCTCAAATATCTCAATAAC+CGG 0.418799 7_1:-936352 None:intergenic
GATATTTGAGCCTGATAACT+TGG 0.421167 7_1:+936363 Msa1003870:five_prime_UTR
GATATTAGCTTGGAATAGTT+AGG 0.422192 7_1:-939586 None:intergenic
ATTGATATCCATTGTGTAGC+AGG 0.425137 7_1:-939870 None:intergenic
ACACATACCCTCTCAGGAAA+AGG 0.427758 7_1:-936487 None:intergenic
GATAACCTTGCCATGGTAAC+CGG 0.435532 7_1:-939338 None:intergenic
CTATAGCTGGGGTTACTAAT+GGG 0.437207 7_1:+941153 Msa1003870:CDS
ACCAGCGCCCTGATATGTTC+AGG 0.437919 7_1:+939139 Msa1003870:CDS
TTAGGGTTAGGGTTTGATGC+AGG 0.440418 7_1:-936063 None:intergenic
TTCAAAGTGGAGAGGAAACT+TGG 0.443586 7_1:+937454 Msa1003870:CDS
GCGAGTCTTTCCCCTTCAAA+TGG 0.445977 7_1:+941930 Msa1003870:CDS
CACATACCCTCTCAGGAAAA+GGG 0.446418 7_1:-936486 None:intergenic
TACCCTCCCTCATTTGTAAA+GGG 0.447684 7_1:-943303 None:intergenic
GAAGAGGTAGAAGAAATTGA+AGG 0.450955 7_1:+936391 Msa1003870:five_prime_UTR
GTATTAATTGGCCGCAGTGC+AGG 0.451258 7_1:-939637 None:intergenic
TCTCTTGTGGTGATGTCAAA+AGG 0.451724 7_1:+941179 Msa1003870:CDS
GTTTCCTGAGTTTCGTCAGC+AGG 0.453762 7_1:-943006 None:intergenic
CAGCATACCTCAGTGGCACC+GGG 0.458135 7_1:-937544 None:intergenic
TAATACTGAAGGTGCTCAAA+AGG 0.460450 7_1:+939654 Msa1003870:CDS
TCAGCATACCTCAGTGGCAC+CGG 0.460949 7_1:-937545 None:intergenic
TCCTTGTTTGATAGTGTGCT+TGG 0.461993 7_1:+939607 Msa1003870:CDS
CGCTATTTGACAACACTGAA+AGG 0.469020 7_1:-943212 None:intergenic
TGTGGAGTCATTGTCGATCT+TGG 0.469974 7_1:+938774 Msa1003870:CDS
AATCAACGCACACGATGATC+AGG 0.469979 7_1:+936193 Msa1003870:five_prime_UTR
ATACCCTCCCTCATTTGTAA+AGG 0.470050 7_1:-943304 None:intergenic
AAATTGTTTCTTGTTGATCT+CGG 0.470903 7_1:+938984 Msa1003870:CDS
CATTGTTCCCTTTACAAATG+AGG 0.474542 7_1:+943296 Msa1003870:three_prime_UTR
TTCATTATAGATATGTGCAT+GGG 0.475655 7_1:+938907 Msa1003870:intron
GTGACTTCAATGGCCACTGC+TGG 0.476110 7_1:+941983 Msa1003870:CDS
ATGTAGGATGTCTGCCGAAA+TGG 0.477227 7_1:+938738 Msa1003870:intron
ATTACATTACTTCTATAGCT+GGG 0.477779 7_1:+941141 Msa1003870:CDS
GGAATGGATCATGGAGCAAT+GGG 0.480666 7_1:+941109 Msa1003870:intron
GTTGTTATGTCACGGAATGC+TGG 0.481715 7_1:+942019 Msa1003870:CDS
AATTTGGAGAATTAGGGTTA+GGG 0.484069 7_1:-936074 None:intergenic
GAGAGGTAGATTGAATATTG+AGG 0.484728 7_1:+939803 Msa1003870:CDS
TGGCAAAGGTGGATTTGGAC+AGG 0.492641 7_1:+937474 Msa1003870:CDS
CTAACCTTAACATGCGTGCT+TGG 0.492853 7_1:-943048 None:intergenic
TTCCAAACATCCCACAAGCT+TGG 0.493712 7_1:-938036 None:intergenic
AGAAGAAATTGAAGGGGTGA+TGG 0.494085 7_1:+936399 Msa1003870:exon
CGTCTATGGATTCCCTCACT+AGG 0.494306 7_1:-942901 None:intergenic
CATAGGACACATACCCTCTC+AGG 0.494559 7_1:-936493 None:intergenic
ATTGTTCCCTTTACAAATGA+GGG 0.495251 7_1:+943297 Msa1003870:three_prime_UTR
GGAGCAGGACGACGAAGTAC+TGG 0.504517 7_1:-936263 None:intergenic
ATCAAACAAGGATATTAGCT+TGG 0.504809 7_1:-939596 None:intergenic
TGGCCACTGCTGGAAGTCGT+TGG 0.506701 7_1:+941993 Msa1003870:CDS
AGGAAATGTCTGAAAGGAGT+AGG 0.507896 7_1:-939529 None:intergenic
GAATGCTGGATTCAGTGATC+AGG 0.508380 7_1:+942033 Msa1003870:CDS
AAGAGGTAGAAGAAATTGAA+GGG 0.508434 7_1:+936392 Msa1003870:five_prime_UTR
GAACACATGCAGTAGATTTG+TGG 0.509091 7_1:-936232 None:intergenic
CATGCTTGGTCCAAGCTTGT+GGG 0.512086 7_1:+938026 Msa1003870:CDS
TTCTTGTTTATCCATTTGAA+GGG 0.516197 7_1:-941941 None:intergenic
TTCCTCTCCACTTTGAACAT+AGG 0.519828 7_1:-937448 None:intergenic
TAGACCTACATTTAGTTAGG+AGG 0.521168 7_1:-943501 None:intergenic
AGTACTTCGTCGTCCTGCTC+CGG 0.521539 7_1:+936265 Msa1003870:five_prime_UTR
AGCACCCTTGGTGGAAGTCA+TGG 0.521686 7_1:+937855 Msa1003870:intron
TGGGCACTTATTATGGATGC+TGG 0.523125 7_1:+940940 Msa1003870:CDS
TCACAGCAACTGCAGCTACA+TGG 0.524987 7_1:+942944 Msa1003870:CDS
AGGTGTTGCTCAAGAGGATG+AGG 0.525431 7_1:+936453 Msa1003870:CDS
AGCACAAGCAAGCAAGGTAA+AGG 0.526556 7_1:-943166 None:intergenic
TCAAATGGATAAACAAGAAG+TGG 0.528244 7_1:+941945 Msa1003870:CDS
CCAAACTTGTGCCGCTATCA+CGG 0.529396 7_1:+936303 Msa1003870:five_prime_UTR
ACGAAACTCAGGAAACTCTT+CGG 0.529891 7_1:+943013 Msa1003870:CDS
CCACATCCACCACCCAAAGA+GGG 0.531782 7_1:-943448 None:intergenic
TTCTTTATAGGAATGGATCA+TGG 0.534028 7_1:+941100 Msa1003870:intron
CGGCCTTCTTATTAGTTGTG+TGG 0.534547 7_1:+940900 Msa1003870:CDS
ACCTGAACATATCAGGGCGC+TGG 0.539965 7_1:-939140 None:intergenic
GGTGGTTTGAGTGCTAATAA+AGG 0.540456 7_1:+936433 Msa1003870:CDS
AGGAATGGATCATGGAGCAA+TGG 0.542705 7_1:+941108 Msa1003870:intron
TAATAAAGGTGTTGCTCAAG+AGG 0.543294 7_1:+936447 Msa1003870:CDS
TACTAATGGGAGCTCTCTTG+TGG 0.544290 7_1:+941166 Msa1003870:CDS
TTCATAAAGGCCGGTTACCA+TGG 0.544662 7_1:+939328 Msa1003870:CDS
ATGCAGGTTATGGACATGCT+TGG 0.546212 7_1:+938012 Msa1003870:intron
GAAGAAATTGAAGGGGTGAT+GGG 0.548399 7_1:+936400 Msa1003870:exon
GACCCAAAGGTTCAAGTAGG+AGG 0.548405 7_1:+937421 Msa1003870:intron
TTTGAACATAGAAACAGTAA+AGG 0.551586 7_1:+937658 Msa1003870:CDS
TGGGATGTTTGGAATACCAC+AGG 0.555511 7_1:+938045 Msa1003870:CDS
AAGCCACACAACTAATAAGA+AGG 0.555747 7_1:-940903 None:intergenic
AAGACCTGCTGACGAAACTC+AGG 0.556055 7_1:+943002 Msa1003870:CDS
TTTGCCTCCTAACTAAATGT+AGG 0.557511 7_1:+943497 Msa1003870:three_prime_UTR
TCTTGGAGAAGATGCACTCA+AGG 0.557515 7_1:+938791 Msa1003870:CDS
CTTTCAGTGTTGTCAAATAG+CGG 0.557757 7_1:+943213 Msa1003870:three_prime_UTR
CACAGCAACTGCAGCTACAT+GGG 0.559415 7_1:+942945 Msa1003870:CDS
GAGAGGAAACTTGGCAAAGG+TGG 0.562906 7_1:+937463 Msa1003870:CDS
GTTCATTATAGATATGTGCA+TGG 0.563871 7_1:+938906 Msa1003870:intron
ACATGCTTGGTCCAAGCTTG+TGG 0.566277 7_1:+938025 Msa1003870:CDS
ATTAAGACGGTCATTACCAC+CGG 0.568388 7_1:-937518 None:intergenic
TTGTACACTTGCCACTCGTA+AGG 0.569716 7_1:-937697 None:intergenic
GGATTCCCTCACTAGGGTAG+AGG 0.571629 7_1:-942894 None:intergenic
GCTATTTGACAACACTGAAA+GGG 0.573079 7_1:-943211 None:intergenic
AATGACCGTCTTAATGGCCC+CGG 0.574417 7_1:+937526 Msa1003870:CDS
TACACTTGCCACTCGTAAGG+AGG 0.576490 7_1:-937694 None:intergenic
ATAAACAAGAAGTGGAGAGA+AGG 0.576509 7_1:+941953 Msa1003870:CDS
GCCACATCCACCACCCAAAG+AGG 0.576647 7_1:-943449 None:intergenic
TTTGACCCAAAGGTTCAAGT+AGG 0.576801 7_1:+937418 Msa1003870:intron
TGATAACTTGGTAAGAGAAG+AGG 0.576856 7_1:+936375 Msa1003870:five_prime_UTR
TGTTTGGAATACCACAGGCC+AGG 0.580670 7_1:+938050 Msa1003870:CDS
AACTCAAGGAAATGTCTGAA+AGG 0.580963 7_1:-939535 None:intergenic
GTTGGGGTGTTGTTATGTCA+CGG 0.581602 7_1:+942011 Msa1003870:CDS
TCATGTTCACTACAAACTCA+AGG 0.582669 7_1:-939549 None:intergenic
GTGTTCATGCTCATTTGGGA+AGG 0.584104 7_1:+939253 Msa1003870:CDS
GCCCATAGCACAAGCAAGCA+AGG 0.585043 7_1:-943172 None:intergenic
TTCCCTTTACAAATGAGGGA+GGG 0.585760 7_1:+943301 Msa1003870:three_prime_UTR
GGGGTGATGGGTGATGAAAG+TGG 0.587284 7_1:+936412 Msa1003870:exon
TAATGGCCCCGGTGCCACTG+AGG 0.587700 7_1:+937537 Msa1003870:CDS
TATCATTACAATGTAGCGGA+TGG 0.588065 7_1:+940841 Msa1003870:CDS
TGGCACCGGGGCCATTAAGA+CGG 0.592504 7_1:-937531 None:intergenic
AGAGGTAGAAGAAATTGAAG+GGG 0.594831 7_1:+936393 Msa1003870:five_prime_UTR
CAAGAATGCCAATGAAGCAA+AGG 0.595613 7_1:+939901 Msa1003870:CDS
GGAAATGTCTGAAAGGAGTA+GGG 0.595669 7_1:-939528 None:intergenic
TGATTTCCTCTACCCTAGTG+AGG 0.596385 7_1:+942888 Msa1003870:CDS
CTTGGAGAAGATGCACTCAA+GGG 0.598220 7_1:+938792 Msa1003870:CDS
GATTTCCTCTACCCTAGTGA+GGG 0.598868 7_1:+942889 Msa1003870:CDS
CTGCGGCCAATTAATACTGA+AGG 0.599700 7_1:+939643 Msa1003870:CDS
AAGTGGAGAGACACCTCCAC+TGG 0.602028 7_1:+939099 Msa1003870:CDS
AAAGAAACCTGAACATATCA+GGG 0.602522 7_1:-939146 None:intergenic
GTCTATGGATTCCCTCACTA+GGG 0.605702 7_1:-942900 None:intergenic
TACCAGGTCGGGCAAAAGAG+AGG 0.609022 7_1:+939786 Msa1003870:intron
TGAGGGAATCCATAGACGAT+GGG 0.610527 7_1:+942906 Msa1003870:CDS
GTTCCCTTTACAAATGAGGG+AGG 0.610675 7_1:+943300 Msa1003870:three_prime_UTR
ATGTTGTCCATCGCGGATCG+CGG 0.614829 7_1:-943276 None:intergenic
TCTTGTTTATCCATTTGAAG+GGG 0.615159 7_1:-941940 None:intergenic
CGCCTATGTTCAAAGTGGAG+AGG 0.617102 7_1:+937446 Msa1003870:CDS
AGCGGCTTGTTGTAGTGTAG+CGG 0.618163 7_1:+943231 Msa1003870:three_prime_UTR
TATTCCATGACTTCCACCAA+GGG 0.620145 7_1:-937859 None:intergenic
GTGAGGGAATCCATAGACGA+TGG 0.620456 7_1:+942905 Msa1003870:CDS
ACCCCAACGACTTCCAGCAG+TGG 0.622356 7_1:-941996 None:intergenic
CACATCCACCACCCAAAGAG+GGG 0.623177 7_1:-943447 None:intergenic
TTATACTCACGCCTGGCCTG+TGG 0.625190 7_1:-938061 None:intergenic
TTCAACATGCTGACCAGTGG+AGG 0.626398 7_1:-939112 None:intergenic
TTACATTACTTCTATAGCTG+GGG 0.629898 7_1:+941142 Msa1003870:CDS
TCGCGGATCGCGGAAAATAG+CGG 0.632812 7_1:-943266 None:intergenic
ATATTCAACATGCTGACCAG+TGG 0.633992 7_1:-939115 None:intergenic
ACATACCCTCTCAGGAAAAG+GGG 0.634258 7_1:-936485 None:intergenic
AGCACCTGATAACCTTGCCA+TGG 0.635229 7_1:-939345 None:intergenic
TTGCTTGCTTGTGCTATGGG+CGG 0.635739 7_1:+943174 Msa1003870:CDS
TTGGAGAAGATGCACTCAAG+GGG 0.638893 7_1:+938793 Msa1003870:CDS
AAAGGCCGGTTACCATGGCA+AGG 0.640441 7_1:+939333 Msa1003870:CDS
ACAAGGAGAATATTACGTGA+TGG 0.641400 7_1:+937905 Msa1003870:CDS
ACACTTGCCACTCGTAAGGA+GGG 0.643172 7_1:-937693 None:intergenic
GTAGAGCGAGGGATTGCAGA+CGG 0.643300 7_1:+940880 Msa1003870:CDS
CTCTTATATTAAGCAAACCA+AGG 0.643646 7_1:+942977 Msa1003870:CDS
ACATCCACCACCCAAAGAGG+GGG 0.643732 7_1:-943446 None:intergenic
GCCACTGCTGGAAGTCGTTG+GGG 0.646395 7_1:+941995 Msa1003870:CDS
TTAGCGCAGCATGTAGAGCG+AGG 0.648996 7_1:+940868 Msa1003870:CDS
TCCAAGCACACTATCAAACA+AGG 0.651722 7_1:-939608 None:intergenic
GTGGAGAGGAAACTTGGCAA+AGG 0.654106 7_1:+937460 Msa1003870:CDS
TAGCGCAGCATGTAGAGCGA+GGG 0.654538 7_1:+940869 Msa1003870:CDS
TAGGATGTCTGCCGAAATGG+TGG 0.657696 7_1:+938741 Msa1003870:intron
GTACATTATAAAGGAAGACA+AGG 0.658821 7_1:+937888 Msa1003870:CDS
GTTGGTCGTCGAGTAACCGG+TGG 0.658919 7_1:+937502 Msa1003870:CDS
GGTGTTGCTCAAGAGGATGA+GGG 0.659331 7_1:+936454 Msa1003870:CDS
TAGGTATCATTACAATGTAG+CGG 0.659418 7_1:+940837 Msa1003870:intron
AATGGTGGCATGCATTGCTG+TGG 0.668208 7_1:+938756 Msa1003870:CDS
GTATTCCATGACTTCCACCA+AGG 0.671722 7_1:-937860 None:intergenic
AGGTTCGCCTATGTTCAAAG+TGG 0.676871 7_1:+937441 Msa1003870:CDS
ACTATGGCCCTCCTTACGAG+TGG 0.689741 7_1:+937686 Msa1003870:CDS
GGGAACAATGTTGTCCATCG+CGG 0.696225 7_1:-943283 None:intergenic
AGCATACCTCAGTGGCACCG+GGG 0.709149 7_1:-937543 None:intergenic
TGGAGAAGATGCACTCAAGG+GGG 0.711646 7_1:+938794 Msa1003870:CDS
TCATTATAGATATGTGCATG+GGG 0.716228 7_1:+938908 Msa1003870:intron
CACATGCAGTAGATTTGTGG+CGG 0.728618 7_1:-936229 None:intergenic
CAACCCTCAGCATACCTCAG+TGG 0.734914 7_1:-937551 None:intergenic
GTGATGGGTGATGAAAGTGG+TGG 0.743174 7_1:+936415 Msa1003870:exon
AACTTGTGCCGCTATCACGG+CGG 0.760975 7_1:+936306 Msa1003870:five_prime_UTR
TTGGACCAAATCCTGCACTG+CGG 0.818000 7_1:+939626 Msa1003870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATAAATAATTGGT+AGG - chr7_1:936103-936122 None:intergenic 10.0%
!!! TCATGTTTTTTTTTTTTTTT+TGG + chr7_1:936554-936573 Msa1003870:intron 10.0%
!! TAGAATGAATTTATTATTTA+TGG + chr7_1:936705-936724 Msa1003870:intron 10.0%
!! TCATTAAAAAAATAGTTAAT+TGG - chr7_1:937977-937996 None:intergenic 10.0%
!!! GTCTTTTTTTTTTTTTTTAA+TGG + chr7_1:938687-938706 Msa1003870:intron 10.0%
!!! TTTAAAGTTAAATCATAATA+GGG - chr7_1:940039-940058 None:intergenic 10.0%
!!! TTTTAAAGTTAAATCATAAT+AGG - chr7_1:940040-940059 None:intergenic 10.0%
!!! GCAATTTTTTTAAAAAATTA+AGG + chr7_1:940150-940169 Msa1003870:intron 10.0%
!!! TTTTTTAAAAAATTAAGGTA+CGG + chr7_1:940155-940174 Msa1003870:intron 10.0%
!! TAAATAAATAAATTAAACCA+AGG - chr7_1:942706-942725 None:intergenic 10.0%
!!! GTTTTTTTTTTTTTTTTGGT+TGG + chr7_1:936558-936577 Msa1003870:intron 15.0%
!! TATAGATTTATTGATATCTA+TGG + chr7_1:936757-936776 Msa1003870:intron 15.0%
!! TATAGATTTATTGATATCTA+TGG + chr7_1:936757-936776 Msa1003870:intron 15.0%
!! TATAAAAATATGTAATCAGT+AGG + chr7_1:936975-936994 Msa1003870:intron 15.0%
!!! TAATTCATTGCATATTTTTT+GGG - chr7_1:937189-937208 None:intergenic 15.0%
!!! ATAATTCATTGCATATTTTT+TGG - chr7_1:937190-937209 None:intergenic 15.0%
!! AAATATAAAAAACAAATCTC+AGG - chr7_1:937827-937846 None:intergenic 15.0%
!! ATTATCATTATATTATATGC+AGG + chr7_1:937996-938015 Msa1003870:intron 15.0%
!! AATATACAATCAATATGTAA+CGG - chr7_1:938140-938159 None:intergenic 15.0%
!! TTTCTTTGTTAAGATTATAT+TGG + chr7_1:938166-938185 Msa1003870:intron 15.0%
!!! AGATTAGTTATATTTTGTAT+AGG + chr7_1:938244-938263 Msa1003870:intron 15.0%
!!! TATATTTTTAATTTTTGCAG+AGG + chr7_1:939213-939232 Msa1003870:intron 15.0%
!!! TTTTTAAAAAATTAAGGTAC+GGG + chr7_1:940156-940175 Msa1003870:intron 15.0%
!!! TAACAAAATTCATGATTTTA+TGG - chr7_1:940187-940206 None:intergenic 15.0%
!! AAAAATTTGAAAATTAGTGT+TGG + chr7_1:940270-940289 Msa1003870:intron 15.0%
!!! AAAAAAGAAAACCATTTTTT+GGG - chr7_1:941317-941336 None:intergenic 15.0%
!!! AAAAAAAGAAAACCATTTTT+TGG - chr7_1:941318-941337 None:intergenic 15.0%
!!! ATAAGTTGCATATTTTAATT+TGG + chr7_1:941617-941636 Msa1003870:intron 15.0%
!!! GTCTAATTTTAAAATTGTTT+CGG + chr7_1:943519-943538 Msa1003870:three_prime_UTR 15.0%
!!! AAAAGAGTATTTATTTTGTA+TGG + chr7_1:943568-943587 Msa1003870:three_prime_UTR 15.0%
!! ATAGAGAAGAAAAAATTGAA+AGG - chr7_1:936134-936153 None:intergenic 20.0%
!! AAACTTAACCAAACATAATT+AGG - chr7_1:936956-936975 None:intergenic 20.0%
!! CTTTACTATGAAATTCTAAT+GGG - chr7_1:937031-937050 None:intergenic 20.0%
!! TCTTTACTATGAAATTCTAA+TGG - chr7_1:937032-937051 None:intergenic 20.0%
!! AACTGTAGTATATTGTAAAT+TGG + chr7_1:937762-937781 Msa1003870:intron 20.0%
!! ATACCTAAAGTACATTATAA+AGG + chr7_1:937879-937898 Msa1003870:CDS 20.0%
!! AAAAAATAGTTAATTGGCTA+AGG - chr7_1:937971-937990 None:intergenic 20.0%
!! ATTATATTATATGCAGGTTA+TGG + chr7_1:938002-938021 Msa1003870:intron 20.0%
!!! TAACTAATCTTGTTTTAGTT+TGG - chr7_1:938234-938253 None:intergenic 20.0%
!!! TTAGTTATATTTTGTATAGG+CGG + chr7_1:938247-938266 Msa1003870:intron 20.0%
!! ATGATTTATGTAGAACATTA+TGG + chr7_1:938290-938309 Msa1003870:intron 20.0%
!! ATTCAAAGAATTTACTTGAA+TGG - chr7_1:938497-938516 None:intergenic 20.0%
!! AATGGATAAATAAGATATAG+AGG - chr7_1:938603-938622 None:intergenic 20.0%
!!! AAAAGGAGCATATTAATTAT+TGG - chr7_1:938644-938663 None:intergenic 20.0%
!! AAATCAATATACCAAACAAA+AGG - chr7_1:938853-938872 None:intergenic 20.0%
!! CTTGTAAGATTAAAAAAAAG+GGG - chr7_1:939060-939079 None:intergenic 20.0%
!! CCTTGTAAGATTAAAAAAAA+GGG - chr7_1:939061-939080 None:intergenic 20.0%
!! TCCTTGTAAGATTAAAAAAA+AGG - chr7_1:939062-939081 None:intergenic 20.0%
!! GCTTCTTATATATATTCAAT+TGG - chr7_1:939968-939987 None:intergenic 20.0%
!! TTAGATTAGACTAACATTAT+AGG - chr7_1:940533-940552 None:intergenic 20.0%
!! TGATTTACTTGGTTAATATA+TGG + chr7_1:940606-940625 Msa1003870:intron 20.0%
!! GATTTACTTGGTTAATATAT+GGG + chr7_1:940607-940626 Msa1003870:intron 20.0%
!! AGTTTCAAAAAACTGAAAAT+AGG - chr7_1:941063-941082 None:intergenic 20.0%
!!! TTTAAGTTAGTTAGGTAATT+AGG + chr7_1:941280-941299 Msa1003870:intron 20.0%
!! TTAAGTTAGTTAGGTAATTA+GGG + chr7_1:941281-941300 Msa1003870:intron 20.0%
!! TAATCTGTGATATGATATAA+TGG + chr7_1:942077-942096 Msa1003870:intron 20.0%
!!! GTACAAAACATTTTGAATAA+AGG - chr7_1:942133-942152 None:intergenic 20.0%
!! TAAATTCTATCAAACTTTGT+TGG - chr7_1:942278-942297 None:intergenic 20.0%
!! AATAATTGGTAGGTTGAATT+TGG - chr7_1:936093-936112 None:intergenic 25.0%
! GAAAAATTGAACAAACTCAT+AGG - chr7_1:936513-936532 None:intergenic 25.0%
!!! TGAGTTTGTTCAATTTTTCA+TGG + chr7_1:936514-936533 Msa1003870:intron 25.0%
! CATTTAGTGTGTTAATTTCA+CGG - chr7_1:936598-936617 None:intergenic 25.0%
!!! TATGGTAACTTGATTTTGAT+CGG + chr7_1:936723-936742 Msa1003870:intron 25.0%
! TTTAGAAATCGGATAAATGT+TGG + chr7_1:936785-936804 Msa1003870:intron 25.0%
! TAGGTGTTTATCAATCAAAT+TGG - chr7_1:936937-936956 None:intergenic 25.0%
! GATAAACACCTAATTATGTT+TGG + chr7_1:936945-936964 Msa1003870:intron 25.0%
! AGAATTTCATAGTAAAGAGA+TGG + chr7_1:937034-937053 Msa1003870:intron 25.0%
!! ATTTTTGAATGATGTAACCA+TGG + chr7_1:937340-937359 Msa1003870:intron 25.0%
! AAGCACATATATATTAACCA+TGG - chr7_1:937360-937379 None:intergenic 25.0%
!! TTGCTATCTTTTCATATTTC+AGG + chr7_1:937624-937643 Msa1003870:intron 25.0%
! TTTGAACATAGAAACAGTAA+AGG + chr7_1:937658-937677 Msa1003870:CDS 25.0%
! CTTCCTTTATAATGTACTTT+AGG - chr7_1:937885-937904 None:intergenic 25.0%
!! TGATTGTCTTTTGAATATGT+AGG + chr7_1:938722-938741 Msa1003870:intron 25.0%
!!! ATTGATTTAGTTGAGTTTTC+TGG + chr7_1:938865-938884 Msa1003870:intron 25.0%
! TTCATTATAGATATGTGCAT+GGG + chr7_1:938907-938926 Msa1003870:intron 25.0%
!! AAATTGTTTCTTGTTGATCT+CGG + chr7_1:938984-939003 Msa1003870:CDS 25.0%
!!! CCCTTTTTTTTAATCTTACA+AGG + chr7_1:939058-939077 Msa1003870:intron 25.0%
!!! TTTTATTTTCAGCAACAAAG+TGG + chr7_1:939082-939101 Msa1003870:intron 25.0%
! TAAAAATATCCAACATCTTG+AGG + chr7_1:939188-939207 Msa1003870:intron 25.0%
!!! ACTCTCATTTTTCTTCATAA+AGG + chr7_1:939315-939334 Msa1003870:CDS 25.0%
! ATACTGGATGAGAATAAAAA+AGG - chr7_1:939375-939394 None:intergenic 25.0%
! GGATTAAAACAAACATGTAA+TGG - chr7_1:939417-939436 None:intergenic 25.0%
! TGGTCAAATTAATGAAACAT+CGG - chr7_1:939948-939967 None:intergenic 25.0%
! GTACTTATGTAACATAGATT+CGG - chr7_1:940079-940098 None:intergenic 25.0%
! GAATCTATGTTACATAAGTA+CGG + chr7_1:940078-940097 Msa1003870:intron 25.0%
! AATCTATGTTACATAAGTAC+GGG + chr7_1:940079-940098 Msa1003870:intron 25.0%
! AGATAGTAAAACAGCATATA+AGG - chr7_1:940508-940527 None:intergenic 25.0%
!!! GTTTTGTTATGATGATGTTA+TGG + chr7_1:940790-940809 Msa1003870:intron 25.0%
! TATTACATTACTTCTATAGC+TGG + chr7_1:941140-941159 Msa1003870:CDS 25.0%
! ATTACATTACTTCTATAGCT+GGG + chr7_1:941141-941160 Msa1003870:CDS 25.0%
!!! ATACATTGTTTTTGAATACC+CGG + chr7_1:941509-941528 Msa1003870:intron 25.0%
! AATTTGAAAGTCTATTCACA+TGG + chr7_1:941643-941662 Msa1003870:intron 25.0%
! TAAAAAATTGAAAGTCACAC+AGG - chr7_1:941760-941779 None:intergenic 25.0%
!!! AATTTTTTAGCAGATCTATC+TGG + chr7_1:941771-941790 Msa1003870:intron 25.0%
!! TTCTTGTTTATCCATTTGAA+GGG - chr7_1:941944-941963 None:intergenic 25.0%
!! AAAACATTTTGAATAAAGGC+AGG - chr7_1:942129-942148 None:intergenic 25.0%
! TGAGTATTACTATTACTACA+TGG + chr7_1:942166-942185 Msa1003870:intron 25.0%
! CTAGATAAGAGTTTAGAAAA+AGG - chr7_1:942389-942408 None:intergenic 25.0%
! AACAAGTCAATAACCATATT+GGG - chr7_1:942448-942467 None:intergenic 25.0%
!! TCAAAACAATTCTTGTTTGT+TGG + chr7_1:942518-942537 Msa1003870:intron 25.0%
! TATTAAGAAATTGCAACTGT+AGG + chr7_1:942576-942595 Msa1003870:intron 25.0%
!!! TGAGAAAAATCACTTTTTGA+AGG - chr7_1:943107-943126 None:intergenic 25.0%
! TTGATTCTGTTTATGTTTAC+AGG + chr7_1:943127-943146 Msa1003870:intron 25.0%
! GTTTATGTTTACAGGAAAAA+TGG + chr7_1:943135-943154 Msa1003870:intron 25.0%
! AATGTATAAGTTTGTGTGTA+AGG + chr7_1:943367-943386 Msa1003870:three_prime_UTR 25.0%
! AATTAGACCTACATTTAGTT+AGG - chr7_1:943507-943526 None:intergenic 25.0%
AATTTGGAGAATTAGGGTTA+GGG - chr7_1:936077-936096 None:intergenic 30.0%
AGGTTGAATTTGGAGAATTA+GGG - chr7_1:936083-936102 None:intergenic 30.0%
! TAGGTTGAATTTGGAGAATT+AGG - chr7_1:936084-936103 None:intergenic 30.0%
AAAAAAAGAGCTGAAGAAAC+CGG + chr7_1:936333-936352 Msa1003870:five_prime_UTR 30.0%
AAGAGGTAGAAGAAATTGAA+GGG + chr7_1:936392-936411 Msa1003870:five_prime_UTR 30.0%
!! GATTTTGATCGGATAAATGT+TGG + chr7_1:936734-936753 Msa1003870:intron 30.0%
CTATGGAGAAGTTTAGAAAT+CGG + chr7_1:936774-936793 Msa1003870:intron 30.0%
GTCTTACTAATAAGCTCAAA+AGG + chr7_1:937210-937229 Msa1003870:intron 30.0%
! GAAGATTTTTGTATATGCGA+TGG + chr7_1:937245-937264 Msa1003870:intron 30.0%
GTCAAAACAAATTGAAGGAA+AGG - chr7_1:937404-937423 None:intergenic 30.0%
TTTGGGTCAAAACAAATTGA+AGG - chr7_1:937409-937428 None:intergenic 30.0%
!!! TTCAATTTGTTTTGACCCAA+AGG + chr7_1:937408-937427 Msa1003870:intron 30.0%
TGTAACTTGGAACTTTAATG+TGG + chr7_1:937572-937591 Msa1003870:intron 30.0%
TGGAACTTTAATGTGGTTAA+AGG + chr7_1:937579-937598 Msa1003870:intron 30.0%
! TGTGGTTAAAGGATTTTCAT+TGG + chr7_1:937590-937609 Msa1003870:intron 30.0%
! CTATCTTTTCATATTTCAGG+TGG + chr7_1:937627-937646 Msa1003870:intron 30.0%
GTACATTATAAAGGAAGACA+AGG + chr7_1:937888-937907 Msa1003870:CDS 30.0%
GAAGCAGATACAATCATAAA+AGG - chr7_1:938088-938107 None:intergenic 30.0%
GTTAAGATTATATTGGAGTG+AGG + chr7_1:938173-938192 Msa1003870:intron 30.0%
!!! CTTGTTTTAGTTTGGTTAGA+TGG - chr7_1:938226-938245 None:intergenic 30.0%
! TATTTTGTATAGGCGGTTTT+TGG + chr7_1:938254-938273 Msa1003870:intron 30.0%
!! GTTTTTGTTGTAGGTGTAAA+TGG + chr7_1:938363-938382 Msa1003870:intron 30.0%
TATATCTAAGCCTTCTATTC+TGG + chr7_1:938571-938590 Msa1003870:intron 30.0%
AAACCAGAAAGGGAAAAAAA+AGG - chr7_1:938661-938680 None:intergenic 30.0%
GTTCATTATAGATATGTGCA+TGG + chr7_1:938906-938925 Msa1003870:intron 30.0%
TCATTATAGATATGTGCATG+GGG + chr7_1:938908-938927 Msa1003870:intron 30.0%
! AAACCAGAGAACTTTTTACT+AGG + chr7_1:938936-938955 Msa1003870:CDS 30.0%
!!! GTGAGAAATTTTGTTTTTGC+CGG + chr7_1:939034-939053 Msa1003870:intron 30.0%
TAAGATTAAAAAAAAGGGGC+CGG - chr7_1:939056-939075 None:intergenic 30.0%
AAAGAAACCTGAACATATCA+GGG - chr7_1:939149-939168 None:intergenic 30.0%
AAAAGAAACCTGAACATATC+AGG - chr7_1:939150-939169 None:intergenic 30.0%
AAATATAAGCCTCAAGATGT+TGG - chr7_1:939200-939219 None:intergenic 30.0%
!! TCATTTTTCTTCATAAAGGC+CGG + chr7_1:939319-939338 Msa1003870:CDS 30.0%
CCTGTCAGAGAAATTAAAAA+CGG - chr7_1:939438-939457 None:intergenic 30.0%
!!! CGTTTTTAATTTCTCTGACA+GGG + chr7_1:939436-939455 Msa1003870:intron 30.0%
! TCTTGTTTGCAAAAAGAAGA+TGG + chr7_1:939474-939493 Msa1003870:CDS 30.0%
CTTGTTTGCAAAAAGAAGAT+GGG + chr7_1:939475-939494 Msa1003870:CDS 30.0%
! GATATTAGCTTGGAATAGTT+AGG - chr7_1:939589-939608 None:intergenic 30.0%
ATCAAACAAGGATATTAGCT+TGG - chr7_1:939599-939618 None:intergenic 30.0%
! TTATCACGCTTTTAAACCTT+TGG + chr7_1:939715-939734 Msa1003870:intron 30.0%
! TATCACGCTTTTAAACCTTT+GGG + chr7_1:939716-939735 Msa1003870:intron 30.0%
TTCCCAAATTGAAATTTACC+AGG + chr7_1:939770-939789 Msa1003870:intron 30.0%
GACCTGGTAAATTTCAATTT+GGG - chr7_1:939775-939794 None:intergenic 30.0%
CAAATTGAAATTTACCAGGT+CGG + chr7_1:939774-939793 Msa1003870:intron 30.0%
AAATTGAAATTTACCAGGTC+GGG + chr7_1:939775-939794 Msa1003870:intron 30.0%
GGACATCATTATGATAGATT+TGG - chr7_1:940467-940486 None:intergenic 30.0%
TAGTAAAACAGCATATAAGG+TGG - chr7_1:940505-940524 None:intergenic 30.0%
TAACACATGTCGTATAGATA+TGG + chr7_1:940550-940569 Msa1003870:intron 30.0%
TGCACATGTCATATAGATAT+CGG + chr7_1:940573-940592 Msa1003870:intron 30.0%
ATTTAACCATCTGATATGTC+TGG + chr7_1:940648-940667 Msa1003870:intron 30.0%
TTTAACCATCTGATATGTCT+GGG + chr7_1:940649-940668 Msa1003870:intron 30.0%
AAGTCAGATAAACAAACACA+AGG - chr7_1:940712-940731 None:intergenic 30.0%
TTGTGTTTGTTTATCTGACT+TGG + chr7_1:940711-940730 Msa1003870:intron 30.0%
TGTGTTTGTTTATCTGACTT+GGG + chr7_1:940712-940731 Msa1003870:intron 30.0%
TGTTATGGTTTACTGAAAAG+TGG + chr7_1:940805-940824 Msa1003870:intron 30.0%
TAGGTATCATTACAATGTAG+CGG + chr7_1:940837-940856 Msa1003870:intron 30.0%
ATAAAGAAGCAGAATTGGAT+GGG - chr7_1:941088-941107 None:intergenic 30.0%
TATAAAGAAGCAGAATTGGA+TGG - chr7_1:941089-941108 None:intergenic 30.0%
ATCCAATTCTGCTTCTTTAT+AGG + chr7_1:941088-941107 Msa1003870:intron 30.0%
TTCCTATAAAGAAGCAGAAT+TGG - chr7_1:941093-941112 None:intergenic 30.0%
ATTCTGCTTCTTTATAGGAA+TGG + chr7_1:941093-941112 Msa1003870:intron 30.0%
TTCTTTATAGGAATGGATCA+TGG + chr7_1:941100-941119 Msa1003870:intron 30.0%
TTACATTACTTCTATAGCTG+GGG + chr7_1:941142-941161 Msa1003870:CDS 30.0%
ATCCAATGTTGATGCATTTA+CGG - chr7_1:941245-941264 None:intergenic 30.0%
ATCAACATTGGATCCAATTT+CGG + chr7_1:941252-941271 Msa1003870:intron 30.0%
!! TGGCGTTTTGAATATACTAA+TGG - chr7_1:941342-941361 None:intergenic 30.0%
TGCTCAAATTTCAGAGATAT+GGG - chr7_1:941399-941418 None:intergenic 30.0%
!! ATATCTCTGAAATTTGAGCA+GGG + chr7_1:941399-941418 Msa1003870:intron 30.0%
AATTTCCCATTTAGTGTAGA+GGG - chr7_1:941467-941486 None:intergenic 30.0%
TAATTTCCCATTTAGTGTAG+AGG - chr7_1:941468-941487 None:intergenic 30.0%
!! GATTGTTGATTCAATAAGCT+TGG + chr7_1:941572-941591 Msa1003870:intron 30.0%
TCTCTGCTTTAATACTATAG+AGG + chr7_1:941826-941845 Msa1003870:intron 30.0%
CTCTGCTTTAATACTATAGA+GGG + chr7_1:941827-941846 Msa1003870:intron 30.0%
!! AACTTCATTGTGATTTGTTC+TGG + chr7_1:941865-941884 Msa1003870:intron 30.0%
! TCTTGTTTATCCATTTGAAG+GGG - chr7_1:941943-941962 None:intergenic 30.0%
! CTTCTTGTTTATCCATTTGA+AGG - chr7_1:941945-941964 None:intergenic 30.0%
TCAAATGGATAAACAAGAAG+TGG + chr7_1:941945-941964 Msa1003870:CDS 30.0%
CACCAGTTTGATATATTACT+CGG - chr7_1:942206-942225 None:intergenic 30.0%
AACAAACCAAGCTAGAAAAT+AGG - chr7_1:942312-942331 None:intergenic 30.0%
!! TAGCTTGGTTTGTTGAAATT+GGG + chr7_1:942318-942337 Msa1003870:intron 30.0%
GATAAGAGTTTAGAAAAAGG+AGG - chr7_1:942386-942405 None:intergenic 30.0%
ACAAGTCAATAACCATATTG+GGG - chr7_1:942447-942466 None:intergenic 30.0%
CAACAAGTCAATAACCATAT+TGG - chr7_1:942449-942468 None:intergenic 30.0%
!! CAATATGGTTATTGACTTGT+TGG + chr7_1:942447-942466 Msa1003870:intron 30.0%
CCAATAAACAATAGTGCTAT+GGG - chr7_1:942660-942679 None:intergenic 30.0%
AACTAATGAAGTGAAGGAAA+AGG - chr7_1:942683-942702 None:intergenic 30.0%
CTCTTATATTAAGCAAACCA+AGG + chr7_1:942977-942996 Msa1003870:CDS 30.0%
ATTGTTCCCTTTACAAATGA+GGG + chr7_1:943297-943316 Msa1003870:three_prime_UTR 30.0%
GAATTTGGAGAATTAGGGTT+AGG - chr7_1:936078-936097 None:intergenic 35.0%
! TTGGATTTTTCACAGCTTAC+CGG - chr7_1:936287-936306 None:intergenic 35.0%
GGCTCAAATATCTCAATAAC+CGG - chr7_1:936355-936374 None:intergenic 35.0%
GATATTTGAGCCTGATAACT+TGG + chr7_1:936363-936382 Msa1003870:five_prime_UTR 35.0%
TCTTCTCTTACCAAGTTATC+AGG - chr7_1:936376-936395 None:intergenic 35.0%
TGATAACTTGGTAAGAGAAG+AGG + chr7_1:936375-936394 Msa1003870:five_prime_UTR 35.0%
GAAGAGGTAGAAGAAATTGA+AGG + chr7_1:936391-936410 Msa1003870:five_prime_UTR 35.0%
AGAGGTAGAAGAAATTGAAG+GGG + chr7_1:936393-936412 Msa1003870:five_prime_UTR 35.0%
!! TAATAAAGGTGTTGCTCAAG+AGG + chr7_1:936447-936466 Msa1003870:CDS 35.0%
ACACTAAATGCAGAGAAGTA+GGG + chr7_1:936608-936627 Msa1003870:intron 35.0%
TGTAGGAACAATTGATATGC+TGG - chr7_1:936650-936669 None:intergenic 35.0%
AACATGTAGTCAAGAGAGTT+TGG + chr7_1:936669-936688 Msa1003870:intron 35.0%
TCATACAAGCACTAATGCAT+CGG + chr7_1:937003-937022 Msa1003870:intron 35.0%
CTGAACAAGTGTTCATAAGT+GGG + chr7_1:937058-937077 Msa1003870:intron 35.0%
TGAACAAGTGTTCATAAGTG+GGG + chr7_1:937059-937078 Msa1003870:intron 35.0%
CTAAAACAACCCCAAAAAAC+CGG - chr7_1:937103-937122 None:intergenic 35.0%
!!! GGTTTTTTGGGGTTGTTTTA+GGG + chr7_1:937102-937121 Msa1003870:intron 35.0%
!!! GTTTTTTGGGGTTGTTTTAG+GGG + chr7_1:937103-937122 Msa1003870:intron 35.0%
!!! TTTTGGGTTCCAAAAGTGTT+GGG - chr7_1:937173-937192 None:intergenic 35.0%
!!! TTTTTGGGTTCCAAAAGTGT+TGG - chr7_1:937174-937193 None:intergenic 35.0%
AACAGTAAAGGTTGCAACTA+TGG + chr7_1:937670-937689 Msa1003870:CDS 35.0%
TATGTACAAGTTTCGTGAAG+AGG + chr7_1:937793-937812 Msa1003870:intron 35.0%
!!! ATTTTGTTTTGAAGCACCCT+TGG + chr7_1:937843-937862 Msa1003870:intron 35.0%
ACAAGGAGAATATTACGTGA+TGG + chr7_1:937905-937924 Msa1003870:CDS 35.0%
CTCACTGACAAAGAAGAAAA+TGG - chr7_1:938621-938640 None:intergenic 35.0%
AGACAAACACAAACCAGAAA+GGG - chr7_1:938671-938690 None:intergenic 35.0%
AAGACAAACACAAACCAGAA+AGG - chr7_1:938672-938691 None:intergenic 35.0%
! CTTGTATTCAGCCTTTTGTT+TGG + chr7_1:938839-938858 Msa1003870:intron 35.0%
TGACCTAGTAAAAAGTTCTC+TGG - chr7_1:938942-938961 None:intergenic 35.0%
TTTCTTGTTGATCTCGGATT+AGG + chr7_1:938990-939009 Msa1003870:CDS 35.0%
TTCTCATCCAGTATTTACTG+TGG + chr7_1:939381-939400 Msa1003870:intron 35.0%
!!! CCGTTTTTAATTTCTCTGAC+AGG + chr7_1:939435-939454 Msa1003870:intron 35.0%
AACTCAAGGAAATGTCTGAA+AGG - chr7_1:939538-939557 None:intergenic 35.0%
TCATGTTCACTACAAACTCA+AGG - chr7_1:939552-939571 None:intergenic 35.0%
TGAGCACCTTCAGTATTAAT+TGG - chr7_1:939652-939671 None:intergenic 35.0%
!! TAATACTGAAGGTGCTCAAA+AGG + chr7_1:939654-939673 Msa1003870:CDS 35.0%
ATTTGGGAAACAGATGATCA+TGG - chr7_1:939759-939778 None:intergenic 35.0%
CGACCTGGTAAATTTCAATT+TGG - chr7_1:939776-939795 None:intergenic 35.0%
GAGAGGTAGATTGAATATTG+AGG + chr7_1:939803-939822 Msa1003870:CDS 35.0%
CCTAAAAAGAAGGTTCGTTT+GGG + chr7_1:939843-939862 Msa1003870:CDS 35.0%
CTAAAAAGAAGGTTCGTTTG+GGG + chr7_1:939844-939863 Msa1003870:CDS 35.0%
TAAAAAGAAGGTTCGTTTGG+GGG + chr7_1:939845-939864 Msa1003870:CDS 35.0%
ATTGATATCCATTGTGTAGC+AGG - chr7_1:939873-939892 None:intergenic 35.0%
CTTATGTAACATAGATTCGG+AGG - chr7_1:940076-940095 None:intergenic 35.0%
ATGTTACATAAGTACGGGTA+CGG + chr7_1:940084-940103 Msa1003870:intron 35.0%
AAATTGCCATATTCTCGTAC+CGG - chr7_1:940137-940156 None:intergenic 35.0%
AAGCATGAGTGCTTGTAAAA+AGG - chr7_1:940437-940456 None:intergenic 35.0%
AAACAGCATATAAGGTGGTT+CGG - chr7_1:940500-940519 None:intergenic 35.0%
AGTAAAACGTATCTACTGCT+TGG + chr7_1:940765-940784 Msa1003870:intron 35.0%
GTAAAACGTATCTACTGCTT+GGG + chr7_1:940766-940785 Msa1003870:intron 35.0%
! TATCATTACAATGTAGCGGA+TGG + chr7_1:940841-940860 Msa1003870:CDS 35.0%
AAGCCACACAACTAATAAGA+AGG - chr7_1:940906-940925 None:intergenic 35.0%
ATGTTGTACATCATTGCATG+TGG + chr7_1:941025-941044 Msa1003870:intron 35.0%
TCAACATTGGATCCAATTTC+GGG + chr7_1:941253-941272 Msa1003870:intron 35.0%
AACGCCAGTAAACTATGATA+AGG + chr7_1:941355-941374 Msa1003870:intron 35.0%
ACGCCAGTAAACTATGATAA+GGG + chr7_1:941356-941375 Msa1003870:intron 35.0%
ATGCCCTTATCATAGTTTAC+TGG - chr7_1:941362-941381 None:intergenic 35.0%
CTGCTCAAATTTCAGAGATA+TGG - chr7_1:941400-941419 None:intergenic 35.0%
!! CATATCTCTGAAATTTGAGC+AGG + chr7_1:941398-941417 Msa1003870:intron 35.0%
!! TATCTCTGAAATTTGAGCAG+GGG + chr7_1:941400-941419 Msa1003870:intron 35.0%
ACCTCTTGTTGCTAATTTCA+TGG + chr7_1:941438-941457 Msa1003870:intron 35.0%
ACCATGAAATTAGCAACAAG+AGG - chr7_1:941442-941461 None:intergenic 35.0%
ATTTCCCATTTAGTGTAGAG+GGG - chr7_1:941466-941485 None:intergenic 35.0%
TCTGTAGGATCCACATAAAT+GGG + chr7_1:941535-941554 Msa1003870:intron 35.0%
TCCAATTTCCTGTACAAGTA+TGG + chr7_1:941708-941727 Msa1003870:intron 35.0%
TTGTTTGTTCACTTGCATGA+GGG + chr7_1:941797-941816 Msa1003870:intron 35.0%
ATAAACAAGAAGTGGAGAGA+AGG + chr7_1:941953-941972 Msa1003870:CDS 35.0%
ATTACTATTACTACATGGCC+TGG + chr7_1:942171-942190 Msa1003870:intron 35.0%
CTCCGAGTAATATATCAAAC+TGG + chr7_1:942201-942220 Msa1003870:intron 35.0%
ATTACTGATCCAATCCAAAG+AGG - chr7_1:942239-942258 None:intergenic 35.0%
GGATTGGATCAGTAATTTAG+TGG + chr7_1:942243-942262 Msa1003870:intron 35.0%
TCTATCAAACTTTGTTGGCA+GGG - chr7_1:942273-942292 None:intergenic 35.0%
TTCTATCAAACTTTGTTGGC+AGG - chr7_1:942274-942293 None:intergenic 35.0%
!! GCTAGAAAATAGGTGGATTT+TGG - chr7_1:942302-942321 None:intergenic 35.0%
!!! AATCCACCTATTTTCTAGCT+TGG + chr7_1:942303-942322 Msa1003870:intron 35.0%
AAACCAAGCTAGAAAATAGG+TGG - chr7_1:942309-942328 None:intergenic 35.0%
!! CTAGCTTGGTTTGTTGAAAT+TGG + chr7_1:942317-942336 Msa1003870:intron 35.0%
! CTGATTTTGTAAGGATGAGT+TGG - chr7_1:942345-942364 None:intergenic 35.0%
!! CCTTACAAGCTGATTTTGTA+AGG - chr7_1:942354-942373 None:intergenic 35.0%
CCTTACAAAATCAGCTTGTA+AGG + chr7_1:942351-942370 Msa1003870:intron 35.0%
CAAGTCAATAACCATATTGG+GGG - chr7_1:942446-942465 None:intergenic 35.0%
!! TGACTTGTTGGATAGATCAT+AGG + chr7_1:942459-942478 Msa1003870:intron 35.0%
!! GACTTGTTGGATAGATCATA+GGG + chr7_1:942460-942479 Msa1003870:intron 35.0%
! ACTTGTTGGATAGATCATAG+GGG + chr7_1:942461-942480 Msa1003870:intron 35.0%
TCCTCTTATTGAACTCATTC+TGG + chr7_1:942489-942508 Msa1003870:intron 35.0%
ACCAGAATGAGTTCAATAAG+AGG - chr7_1:942493-942512 None:intergenic 35.0%
AACTAGTGAAGTGAAGGAAA+AGG - chr7_1:942544-942563 None:intergenic 35.0%
! TTGGGTTGTTAAGCATTGTA+AGG + chr7_1:942607-942626 Msa1003870:intron 35.0%
CCCATAGCACTATTGTTTAT+TGG + chr7_1:942657-942676 Msa1003870:intron 35.0%
GCCAATAAACAATAGTGCTA+TGG - chr7_1:942661-942680 None:intergenic 35.0%
! ATCATCCACGTTTTATCTGT+AGG + chr7_1:942855-942874 Msa1003870:intron 35.0%
AACAACCTACAGATAAAACG+TGG - chr7_1:942863-942882 None:intergenic 35.0%
GCTATTTGACAACACTGAAA+GGG - chr7_1:943214-943233 None:intergenic 35.0%
CTTTCAGTGTTGTCAAATAG+CGG + chr7_1:943213-943232 Msa1003870:three_prime_UTR 35.0%
CATTGTTCCCTTTACAAATG+AGG + chr7_1:943296-943315 Msa1003870:three_prime_UTR 35.0%
TTTGCCTCCTAACTAAATGT+AGG + chr7_1:943497-943516 Msa1003870:three_prime_UTR 35.0%
TAGACCTACATTTAGTTAGG+AGG - chr7_1:943504-943523 None:intergenic 35.0%
! GGATGCGACGAATTTTGAAT+TGG - chr7_1:936045-936064 None:intergenic 40.0%
GAACACATGCAGTAGATTTG+TGG - chr7_1:936235-936254 None:intergenic 40.0%
AGAAGAAATTGAAGGGGTGA+TGG + chr7_1:936399-936418 Msa1003870:exon 40.0%
GAAGAAATTGAAGGGGTGAT+GGG + chr7_1:936400-936419 Msa1003870:exon 40.0%
GGTGGTTTGAGTGCTAATAA+AGG + chr7_1:936433-936452 Msa1003870:CDS 40.0%
CACACTAAATGCAGAGAAGT+AGG + chr7_1:936607-936626 Msa1003870:intron 40.0%
TGCAGAGAAGTAGGGATAAA+TGG + chr7_1:936616-936635 Msa1003870:intron 40.0%
GCAGAGAAGTAGGGATAAAT+GGG + chr7_1:936617-936636 Msa1003870:intron 40.0%
CTCTCTTGACTACATGTTGT+AGG - chr7_1:936667-936686 None:intergenic 40.0%
CCACTTATGAACACTTGTTC+AGG - chr7_1:937060-937079 None:intergenic 40.0%
CCTGAACAAGTGTTCATAAG+TGG + chr7_1:937057-937076 Msa1003870:intron 40.0%
GAACAAGTGTTCATAAGTGG+GGG + chr7_1:937060-937079 Msa1003870:intron 40.0%
!!! CGGTTTTTTGGGGTTGTTTT+AGG + chr7_1:937101-937120 Msa1003870:intron 40.0%
TTTGACCCAAAGGTTCAAGT+AGG + chr7_1:937418-937437 Msa1003870:intron 40.0%
AACCTCCTACTTGAACCTTT+GGG - chr7_1:937426-937445 None:intergenic 40.0%
TTCCTCTCCACTTTGAACAT+AGG - chr7_1:937451-937470 None:intergenic 40.0%
TTCAAAGTGGAGAGGAAACT+TGG + chr7_1:937454-937473 Msa1003870:CDS 40.0%
! AAACTTGGCAAAGGTGGATT+TGG + chr7_1:937469-937488 Msa1003870:CDS 40.0%
! GGATTTGGACAGGTTTTTGT+TGG + chr7_1:937484-937503 Msa1003870:CDS 40.0%
ATTAAGACGGTCATTACCAC+CGG - chr7_1:937521-937540 None:intergenic 40.0%
TATTCCATGACTTCCACCAA+GGG - chr7_1:937862-937881 None:intergenic 40.0%
!!! TGTATAGGCGGTTTTTGGTT+TGG + chr7_1:938259-938278 Msa1003870:intron 40.0%
ACTAAGTAGAATCCGCTACT+TGG - chr7_1:938327-938346 None:intergenic 40.0%
!! AAGTAGCGGATTCTACTTAG+TGG + chr7_1:938326-938345 Msa1003870:intron 40.0%
!! AGTAGCGGATTCTACTTAGT+GGG + chr7_1:938327-938346 Msa1003870:intron 40.0%
GGATTCTACTTAGTGGGATA+AGG + chr7_1:938333-938352 Msa1003870:intron 40.0%
!!! GGCTTGGTTGTTTTTGTTGT+AGG + chr7_1:938354-938373 Msa1003870:intron 40.0%
!!! GCTCCTTTTTTTTCCCTTTC+TGG + chr7_1:938655-938674 Msa1003870:intron 40.0%
! AACTTTTTACTAGGTCAGCC+AGG + chr7_1:938945-938964 Msa1003870:CDS 40.0%
ATATTCAACATGCTGACCAG+TGG - chr7_1:939118-939137 None:intergenic 40.0%
TGCAAGTGTTCATGCTCATT+TGG + chr7_1:939248-939267 Msa1003870:CDS 40.0%
GCAAGTGTTCATGCTCATTT+GGG + chr7_1:939249-939268 Msa1003870:CDS 40.0%
GGAAATGTCTGAAAGGAGTA+GGG - chr7_1:939531-939550 None:intergenic 40.0%
AGGAAATGTCTGAAAGGAGT+AGG - chr7_1:939532-939551 None:intergenic 40.0%
!! TCCTTGTTTGATAGTGTGCT+TGG + chr7_1:939607-939626 Msa1003870:CDS 40.0%
TCCAAGCACACTATCAAACA+AGG - chr7_1:939611-939630 None:intergenic 40.0%
AGGTGCTCAAAAGGTAATGA+TGG + chr7_1:939663-939682 Msa1003870:intron 40.0%
TGATTCGCAGCCTAAAAAGA+AGG + chr7_1:939833-939852 Msa1003870:CDS 40.0%
GCCTAAAAAGAAGGTTCGTT+TGG + chr7_1:939842-939861 Msa1003870:CDS 40.0%
! CCCAAACGAACCTTCTTTTT+AGG - chr7_1:939846-939865 None:intergenic 40.0%
CAAGAATGCCAATGAAGCAA+AGG + chr7_1:939901-939920 Msa1003870:CDS 40.0%
CATCTCTACCTTTGCTTCAT+TGG - chr7_1:939912-939931 None:intergenic 40.0%
! GTGTCTTGCTGTGATTTACT+TGG + chr7_1:940595-940614 Msa1003870:intron 40.0%
TGAAAAGTGGCTGTACTGTT+AGG + chr7_1:940818-940837 Msa1003870:intron 40.0%
CATAATAAGTGCCCAGAGAT+TGG - chr7_1:940935-940954 None:intergenic 40.0%
CAATCTCTGGGCACTTATTA+TGG + chr7_1:940933-940952 Msa1003870:CDS 40.0%
CTTATTATGGATGCTGGAAC+TGG + chr7_1:940946-940965 Msa1003870:CDS 40.0%
TCTATAGCTGGGGTTACTAA+TGG + chr7_1:941152-941171 Msa1003870:CDS 40.0%
CTATAGCTGGGGTTACTAAT+GGG + chr7_1:941153-941172 Msa1003870:CDS 40.0%
! TCTCTTGTGGTGATGTCAAA+AGG + chr7_1:941179-941198 Msa1003870:CDS 40.0%
CTCCGTAAATGCATCAACAT+TGG + chr7_1:941240-941259 Msa1003870:intron 40.0%
CAACATTGGATCCAATTTCG+GGG + chr7_1:941254-941273 Msa1003870:intron 40.0%
AACATTGGATCCAATTTCGG+GGG + chr7_1:941255-941274 Msa1003870:intron 40.0%
AACTTAAAGACCCCCGAAAT+TGG - chr7_1:941268-941287 None:intergenic 40.0%
GTCTCTGTGTTCCCAAAAAA+TGG + chr7_1:941303-941322 Msa1003870:intron 40.0%
GTCTGTAGGATCCACATAAA+TGG + chr7_1:941534-941553 Msa1003870:intron 40.0%
ATCCACATAAATGGGAGTGA+GGG + chr7_1:941543-941562 Msa1003870:intron 40.0%
CTTGTACAGGAAATTGGAAC+AGG - chr7_1:941706-941725 None:intergenic 40.0%
GCCATACTTGTACAGGAAAT+TGG - chr7_1:941712-941731 None:intergenic 40.0%
GTTGTTTGTTCACTTGCATG+AGG + chr7_1:941796-941815 Msa1003870:intron 40.0%
!! TGATTTGTTCTGGTTTCCAC+AGG + chr7_1:941875-941894 Msa1003870:intron 40.0%
! AGGTTTTCACGTGACTTCAA+TGG + chr7_1:941973-941992 Msa1003870:CDS 40.0%
CAAAATCAGCTTGTAAGGTG+AGG + chr7_1:942356-942375 Msa1003870:intron 40.0%
AGAGTCCTATCTTTCCAACA+CGG + chr7_1:942407-942426 Msa1003870:intron 40.0%
!!! CTTGGTTTTTTCCCCCAATA+TGG + chr7_1:942432-942451 Msa1003870:intron 40.0%
TCCTTCACTTCACTAGTTCA+AGG + chr7_1:942546-942565 Msa1003870:intron 40.0%
ACCTTGAACTAGTGAAGTGA+AGG - chr7_1:942550-942569 None:intergenic 40.0%
!! CAACTGTAGGAAGCACTATT+GGG + chr7_1:942589-942608 Msa1003870:intron 40.0%
GTGCTATGGGACAGTATTAT+GGG - chr7_1:942647-942666 None:intergenic 40.0%
AGTGCTATGGGACAGTATTA+TGG - chr7_1:942648-942667 None:intergenic 40.0%
CCAAGGAACTAATGAAGTGA+AGG - chr7_1:942689-942708 None:intergenic 40.0%
CCTTCACTTCATTAGTTCCT+TGG + chr7_1:942686-942705 Msa1003870:intron 40.0%
ATCCATAGACGATGGGATAA+TGG + chr7_1:942913-942932 Msa1003870:CDS 40.0%
AACCATTATCCCATCGTCTA+TGG - chr7_1:942918-942937 None:intergenic 40.0%
ACGAAACTCAGGAAACTCTT+CGG + chr7_1:943013-943032 Msa1003870:CDS 40.0%
ATTTCCAAGCACGCATGTTA+AGG + chr7_1:943044-943063 Msa1003870:CDS 40.0%
AAGCACGCATGTTAAGGTTA+GGG + chr7_1:943050-943069 Msa1003870:intron 40.0%
CGCTATTTGACAACACTGAA+AGG - chr7_1:943215-943234 None:intergenic 40.0%
TTCCCTTTACAAATGAGGGA+GGG + chr7_1:943301-943320 Msa1003870:three_prime_UTR 40.0%
TACCCTCCCTCATTTGTAAA+GGG - chr7_1:943306-943325 None:intergenic 40.0%
ATACCCTCCCTCATTTGTAA+AGG - chr7_1:943307-943326 None:intergenic 40.0%
TTAGGGTTAGGGTTTGATGC+AGG - chr7_1:936066-936085 None:intergenic 45.0%
AATCAACGCACACGATGATC+AGG + chr7_1:936193-936212 Msa1003870:five_prime_UTR 45.0%
CACATGCAGTAGATTTGTGG+CGG - chr7_1:936232-936251 None:intergenic 45.0%
! ATACTACCCCTTTTCCTGAG+AGG + chr7_1:936479-936498 Msa1003870:CDS 45.0%
! TACTACCCCTTTTCCTGAGA+GGG + chr7_1:936480-936499 Msa1003870:CDS 45.0%
ACATACCCTCTCAGGAAAAG+GGG - chr7_1:936488-936507 None:intergenic 45.0%
CACATACCCTCTCAGGAAAA+GGG - chr7_1:936489-936508 None:intergenic 45.0%
ACACATACCCTCTCAGGAAA+AGG - chr7_1:936490-936509 None:intergenic 45.0%
AAAAAACCGGTTGTGAGGTG+AGG - chr7_1:937090-937109 None:intergenic 45.0%
!!! TCACCTCACAACCGGTTTTT+TGG + chr7_1:937089-937108 Msa1003870:intron 45.0%
!!! CACCTCACAACCGGTTTTTT+GGG + chr7_1:937090-937109 Msa1003870:intron 45.0%
!!! ACCTCACAACCGGTTTTTTG+GGG + chr7_1:937091-937110 Msa1003870:intron 45.0%
TTAGGGGCGAAACTAGAACT+AGG + chr7_1:937119-937138 Msa1003870:intron 45.0%
GGCGAAACTAGAACTAGGAT+GGG + chr7_1:937124-937143 Msa1003870:intron 45.0%
!! GTTCCAAAAGTGTTGGGATG+AGG - chr7_1:937167-937186 None:intergenic 45.0%
GAACCTCCTACTTGAACCTT+TGG - chr7_1:937427-937446 None:intergenic 45.0%
AGGTTCGCCTATGTTCAAAG+TGG + chr7_1:937441-937460 Msa1003870:CDS 45.0%
TTTGTTGGTCGTCGAGTAAC+CGG + chr7_1:937499-937518 Msa1003870:CDS 45.0%
! GGTGGTAATGACCGTCTTAA+TGG + chr7_1:937520-937539 Msa1003870:CDS 45.0%
GTATGCTGAGGGTTGTAACT+TGG + chr7_1:937559-937578 Msa1003870:intron 45.0%
TTGTACACTTGCCACTCGTA+AGG - chr7_1:937700-937719 None:intergenic 45.0%
!!! TTGTTTTGAAGCACCCTTGG+TGG + chr7_1:937846-937865 Msa1003870:intron 45.0%
GTATTCCATGACTTCCACCA+AGG - chr7_1:937863-937882 None:intergenic 45.0%
ATGCAGGTTATGGACATGCT+TGG + chr7_1:938012-938031 Msa1003870:intron 45.0%
TTCCAAACATCCCACAAGCT+TGG - chr7_1:938039-938058 None:intergenic 45.0%
! TGGGATGTTTGGAATACCAC+AGG + chr7_1:938045-938064 Msa1003870:CDS 45.0%
AAAAGGCTTATACTCACGCC+TGG - chr7_1:938071-938090 None:intergenic 45.0%
CTACTTAGTGGGATAAGGCT+TGG + chr7_1:938338-938357 Msa1003870:intron 45.0%
ATGTAGGATGTCTGCCGAAA+TGG + chr7_1:938738-938757 Msa1003870:intron 45.0%
AGCAATGCATGCCACCATTT+CGG - chr7_1:938755-938774 None:intergenic 45.0%
TGTGGAGTCATTGTCGATCT+TGG + chr7_1:938774-938793 Msa1003870:CDS 45.0%
TCTTGGAGAAGATGCACTCA+AGG + chr7_1:938791-938810 Msa1003870:CDS 45.0%
CTTGGAGAAGATGCACTCAA+GGG + chr7_1:938792-938811 Msa1003870:CDS 45.0%
TTGGAGAAGATGCACTCAAG+GGG + chr7_1:938793-938812 Msa1003870:CDS 45.0%
TTCTTCTCTTGTGCTGTACC+TGG - chr7_1:938966-938985 None:intergenic 45.0%
GTGTTCATGCTCATTTGGGA+AGG + chr7_1:939253-939272 Msa1003870:CDS 45.0%
TTCATAAAGGCCGGTTACCA+TGG + chr7_1:939328-939347 Msa1003870:CDS 45.0%
GATAACCTTGCCATGGTAAC+CGG - chr7_1:939341-939360 None:intergenic 45.0%
GTTACCATGGCAAGGTTATC+AGG + chr7_1:939341-939360 Msa1003870:CDS 45.0%
CCAATCGCCACAGTAAATAC+TGG - chr7_1:939391-939410 None:intergenic 45.0%
CCAGTATTTACTGTGGCGAT+TGG + chr7_1:939388-939407 Msa1003870:intron 45.0%
CTGCGGCCAATTAATACTGA+AGG + chr7_1:939643-939662 Msa1003870:CDS 45.0%
! CACGCTTTTAAACCTTTGGG+TGG + chr7_1:939719-939738 Msa1003870:intron 45.0%
AATACAATGACGCCACCCAA+AGG - chr7_1:939734-939753 None:intergenic 45.0%
AAGAAGCCTCATCCGATTAG+TGG + chr7_1:939981-940000 Msa1003870:intron 45.0%
ATGTAGCCGCATCCACTAAT+CGG - chr7_1:939996-940015 None:intergenic 45.0%
! CATATTCTCGTACCGGTAGT+CGG - chr7_1:940130-940149 None:intergenic 45.0%
! AAAAGGTGAAGTACCCGTAC+CGG - chr7_1:940420-940439 None:intergenic 45.0%
CGGCCTTCTTATTAGTTGTG+TGG + chr7_1:940900-940919 Msa1003870:CDS 45.0%
TGGCTTCTTGTTCCAATCTC+TGG + chr7_1:940920-940939 Msa1003870:CDS 45.0%
GGCTTCTTGTTCCAATCTCT+GGG + chr7_1:940921-940940 Msa1003870:CDS 45.0%
TGGGCACTTATTATGGATGC+TGG + chr7_1:940940-940959 Msa1003870:CDS 45.0%
AGGAATGGATCATGGAGCAA+TGG + chr7_1:941108-941127 Msa1003870:intron 45.0%
GGAATGGATCATGGAGCAAT+GGG + chr7_1:941109-941128 Msa1003870:intron 45.0%
TACTAATGGGAGCTCTCTTG+TGG + chr7_1:941166-941185 Msa1003870:CDS 45.0%
! CGGGGGTCTTTAAGTTAGTT+AGG + chr7_1:941272-941291 Msa1003870:intron 45.0%
! TCTGAAATTTGAGCAGGGGT+GGG + chr7_1:941404-941423 Msa1003870:intron 45.0%
TGGTTCCCCTCTACACTAAA+TGG + chr7_1:941458-941477 Msa1003870:intron 45.0%
GGTTCCCCTCTACACTAAAT+GGG + chr7_1:941459-941478 Msa1003870:intron 45.0%
GATCCACATAAATGGGAGTG+AGG + chr7_1:941542-941561 Msa1003870:intron 45.0%
TACAGGAAATTGGAACAGGC+GGG - chr7_1:941702-941721 None:intergenic 45.0%
GTACAGGAAATTGGAACAGG+CGG - chr7_1:941703-941722 None:intergenic 45.0%
CCTCTTTGCCATACTTGTAC+AGG - chr7_1:941719-941738 None:intergenic 45.0%
CCTGTACAAGTATGGCAAAG+AGG + chr7_1:941716-941735 Msa1003870:intron 45.0%
TTGTGTATACTGTGTGCCTG+TGG - chr7_1:941894-941913 None:intergenic 45.0%
!! GTTGGGGTGTTGTTATGTCA+CGG + chr7_1:942011-942030 Msa1003870:CDS 45.0%
GTTGTTATGTCACGGAATGC+TGG + chr7_1:942019-942038 Msa1003870:CDS 45.0%
GAATGCTGGATTCAGTGATC+AGG + chr7_1:942033-942052 Msa1003870:CDS 45.0%
ATTACTACATGGCCTGGCTT+TGG + chr7_1:942177-942196 Msa1003870:intron 45.0%
GCTTGCAATCCTCTTTGGAT+TGG + chr7_1:942227-942246 Msa1003870:intron 45.0%
GAGTCCTATCTTTCCAACAC+GGG + chr7_1:942408-942427 Msa1003870:intron 45.0%
AAGTCCCGTGTTGGAAAGAT+AGG - chr7_1:942415-942434 None:intergenic 45.0%
TATCTTTCCAACACGGGACT+TGG + chr7_1:942414-942433 Msa1003870:intron 45.0%
GAAAAAACCAAGTCCCGTGT+TGG - chr7_1:942424-942443 None:intergenic 45.0%
GTTGGATAGATCATAGGGGT+TGG + chr7_1:942465-942484 Msa1003870:intron 45.0%
!! GCAACTGTAGGAAGCACTAT+TGG + chr7_1:942588-942607 Msa1003870:intron 45.0%
AACTTTGTGCAGAGAAGGCA+AGG - chr7_1:942785-942804 None:intergenic 45.0%
TGCCTTCTCTGCACAAAGTT+CGG + chr7_1:942785-942804 Msa1003870:intron 45.0%
AACCGAACTTTGTGCAGAGA+AGG - chr7_1:942790-942809 None:intergenic 45.0%
ACGTGGATGATGAGAAAGCA+AGG - chr7_1:942846-942865 None:intergenic 45.0%
TGATTTCCTCTACCCTAGTG+AGG + chr7_1:942888-942907 Msa1003870:CDS 45.0%
GATTTCCTCTACCCTAGTGA+GGG + chr7_1:942889-942908 Msa1003870:CDS 45.0%
GTCTATGGATTCCCTCACTA+GGG - chr7_1:942903-942922 None:intergenic 45.0%
TGAGGGAATCCATAGACGAT+GGG + chr7_1:942906-942925 Msa1003870:CDS 45.0%
! GACGATGGGATAATGGTTAC+AGG + chr7_1:942920-942939 Msa1003870:CDS 45.0%
CTAACCTTAACATGCGTGCT+TGG - chr7_1:943051-943070 None:intergenic 45.0%
CAAGCACGCATGTTAAGGTT+AGG + chr7_1:943049-943068 Msa1003870:intron 45.0%
AGCACAAGCAAGCAAGGTAA+AGG - chr7_1:943169-943188 None:intergenic 45.0%
TACCTTGCTTGCTTGTGCTA+TGG + chr7_1:943170-943189 Msa1003870:CDS 45.0%
ACCTTGCTTGCTTGTGCTAT+GGG + chr7_1:943171-943190 Msa1003870:CDS 45.0%
GTTCCCTTTACAAATGAGGG+AGG + chr7_1:943300-943319 Msa1003870:three_prime_UTR 45.0%
!! ATTGAAAAAAAATAAATAAT+TGG - chr7_1:936107-936126 None:intergenic 5.0%
!!! TAAATAAATTTTTTAAAACA+TGG - chr7_1:936891-936910 None:intergenic 5.0%
! TTTTCACAGCTTACCGGAGC+AGG - chr7_1:936281-936300 None:intergenic 50.0%
! CCAAACTTGTGCCGCTATCA+CGG + chr7_1:936303-936322 Msa1003870:five_prime_UTR 50.0%
! TTTTCTTGCCGCCGTGATAG+CGG - chr7_1:936317-936336 None:intergenic 50.0%
!! GTGATGGGTGATGAAAGTGG+TGG + chr7_1:936415-936434 Msa1003870:exon 50.0%
!! AGGTGTTGCTCAAGAGGATG+AGG + chr7_1:936453-936472 Msa1003870:CDS 50.0%
!! GGTGTTGCTCAAGAGGATGA+GGG + chr7_1:936454-936473 Msa1003870:CDS 50.0%
CATAGGACACATACCCTCTC+AGG - chr7_1:936496-936515 None:intergenic 50.0%
ACCCCAAAAAACCGGTTGTG+AGG - chr7_1:937095-937114 None:intergenic 50.0%
GGGCGAAACTAGAACTAGGA+TGG + chr7_1:937123-937142 Msa1003870:intron 50.0%
! GCACCTCATCCCAACACTTT+TGG + chr7_1:937161-937180 Msa1003870:intron 50.0%
GACCCAAAGGTTCAAGTAGG+AGG + chr7_1:937421-937440 Msa1003870:intron 50.0%
CGCCTATGTTCAAAGTGGAG+AGG + chr7_1:937446-937465 Msa1003870:CDS 50.0%
GTGGAGAGGAAACTTGGCAA+AGG + chr7_1:937460-937479 Msa1003870:CDS 50.0%
GAGAGGAAACTTGGCAAAGG+TGG + chr7_1:937463-937482 Msa1003870:CDS 50.0%
! TGGCAAAGGTGGATTTGGAC+AGG + chr7_1:937474-937493 Msa1003870:CDS 50.0%
AATGACCGTCTTAATGGCCC+CGG + chr7_1:937526-937545 Msa1003870:CDS 50.0%
ACACTTGCCACTCGTAAGGA+GGG - chr7_1:937696-937715 None:intergenic 50.0%
TACACTTGCCACTCGTAAGG+AGG - chr7_1:937697-937716 None:intergenic 50.0%
CGAGTGGCAAGTGTACAAGT+AGG + chr7_1:937702-937721 Msa1003870:intron 50.0%
ACATGCTTGGTCCAAGCTTG+TGG + chr7_1:938025-938044 Msa1003870:CDS 50.0%
CATGCTTGGTCCAAGCTTGT+GGG + chr7_1:938026-938045 Msa1003870:CDS 50.0%
GTCCAAGCTTGTGGGATGTT+TGG + chr7_1:938034-938053 Msa1003870:CDS 50.0%
! TGTTTGGAATACCACAGGCC+AGG + chr7_1:938050-938069 Msa1003870:CDS 50.0%
GCGCTGTTTGATCCAAGTAG+CGG + chr7_1:938312-938331 Msa1003870:intron 50.0%
GAGGACACAGCCAGAATAGA+AGG - chr7_1:938584-938603 None:intergenic 50.0%
TAGGATGTCTGCCGAAATGG+TGG + chr7_1:938741-938760 Msa1003870:intron 50.0%
AATGGTGGCATGCATTGCTG+TGG + chr7_1:938756-938775 Msa1003870:CDS 50.0%
TGGAGAAGATGCACTCAAGG+GGG + chr7_1:938794-938813 Msa1003870:CDS 50.0%
TTCAACATGCTGACCAGTGG+AGG - chr7_1:939115-939134 None:intergenic 50.0%
AGCACCTGATAACCTTGCCA+TGG - chr7_1:939348-939367 None:intergenic 50.0%
CAGAAGCAGCATAGCATCTC+AGG - chr7_1:939508-939527 None:intergenic 50.0%
TTGGACCAAATCCTGCACTG+CGG + chr7_1:939626-939645 Msa1003870:CDS 50.0%
GTATTAATTGGCCGCAGTGC+AGG - chr7_1:939640-939659 None:intergenic 50.0%
! CCTCATCCGATTAGTGGATG+CGG + chr7_1:939987-940006 Msa1003870:intron 50.0%
! GATTAGTGGATGCGGCTACA+TGG + chr7_1:939995-940014 Msa1003870:intron 50.0%
ATAAGTACGGGTACGGTACC+CGG + chr7_1:940091-940110 Msa1003870:intron 50.0%
GTACGGTACCCGGTACAATA+CGG + chr7_1:940101-940120 Msa1003870:intron 50.0%
TACGGTACCCGGTACAATAC+GGG + chr7_1:940102-940121 Msa1003870:intron 50.0%
AGTCGGTACCCGTATTGTAC+CGG - chr7_1:940113-940132 None:intergenic 50.0%
!! ACAATACGGGTACCGACTAC+CGG + chr7_1:940115-940134 Msa1003870:intron 50.0%
CGACTACCGGTACGAGAATA+TGG + chr7_1:940128-940147 Msa1003870:intron 50.0%
! ACGAGTACCGTATGTGTACC+CGG + chr7_1:940398-940417 Msa1003870:intron 50.0%
TACCGTATGTGTACCCGGTA+CGG + chr7_1:940403-940422 Msa1003870:intron 50.0%
! AAAGGTGAAGTACCCGTACC+GGG - chr7_1:940419-940438 None:intergenic 50.0%
GCACTCCCAGACATATCAGA+TGG - chr7_1:940657-940676 None:intergenic 50.0%
!! CTCTGAAATTTGAGCAGGGG+TGG + chr7_1:941403-941422 Msa1003870:intron 50.0%
CTGAAATTTGAGCAGGGGTG+GGG + chr7_1:941405-941424 Msa1003870:intron 50.0%
TTGAATACCCGGCTGTCTGT+AGG + chr7_1:941520-941539 Msa1003870:intron 50.0%
ATGTGGATCCTACAGACAGC+CGG - chr7_1:941531-941550 None:intergenic 50.0%
CACCCTCACTCCCATTTATG+TGG - chr7_1:941548-941567 None:intergenic 50.0%
GCGAGTCTTTCCCCTTCAAA+TGG + chr7_1:941930-941949 Msa1003870:CDS 50.0%
ATTACTCGGAGACCAAAGCC+AGG - chr7_1:942192-942211 None:intergenic 50.0%
GGTGTGCTTGCAATCCTCTT+TGG + chr7_1:942222-942241 Msa1003870:intron 50.0%
CGTCTATGGATTCCCTCACT+AGG - chr7_1:942904-942923 None:intergenic 50.0%
GTGAGGGAATCCATAGACGA+TGG + chr7_1:942905-942924 Msa1003870:CDS 50.0%
TCACAGCAACTGCAGCTACA+TGG + chr7_1:942944-942963 Msa1003870:CDS 50.0%
CACAGCAACTGCAGCTACAT+GGG + chr7_1:942945-942964 Msa1003870:CDS 50.0%
AAGACCTGCTGACGAAACTC+AGG + chr7_1:943002-943021 Msa1003870:CDS 50.0%
GTTTCCTGAGTTTCGTCAGC+AGG - chr7_1:943009-943028 None:intergenic 50.0%
TTGCTTGCTTGTGCTATGGG+CGG + chr7_1:943174-943193 Msa1003870:CDS 50.0%
!! AGCGGCTTGTTGTAGTGTAG+CGG + chr7_1:943231-943250 Msa1003870:three_prime_UTR 50.0%
GGGAACAATGTTGTCCATCG+CGG - chr7_1:943286-943305 None:intergenic 50.0%
AGTACTTCGTCGTCCTGCTC+CGG + chr7_1:936265-936284 Msa1003870:five_prime_UTR 55.0%
!! CCGTGATAGCGGCACAAGTT+TGG - chr7_1:936306-936325 None:intergenic 55.0%
! AACTTGTGCCGCTATCACGG+CGG + chr7_1:936306-936325 Msa1003870:five_prime_UTR 55.0%
!! GGGGTGATGGGTGATGAAAG+TGG + chr7_1:936412-936431 Msa1003870:exon 55.0%
GGCAATCCTCACCTCACAAC+CGG + chr7_1:937081-937100 Msa1003870:intron 55.0%
AACTAGGATGGGCGACCTCT+TGG + chr7_1:937135-937154 Msa1003870:intron 55.0%
ACTAGGATGGGCGACCTCTT+GGG + chr7_1:937136-937155 Msa1003870:intron 55.0%
TCAGCATACCTCAGTGGCAC+CGG - chr7_1:937548-937567 None:intergenic 55.0%
! GTGCCACTGAGGTATGCTGA+GGG + chr7_1:937548-937567 Msa1003870:intron 55.0%
CAACCCTCAGCATACCTCAG+TGG - chr7_1:937554-937573 None:intergenic 55.0%
ACTATGGCCCTCCTTACGAG+TGG + chr7_1:937686-937705 Msa1003870:CDS 55.0%
AGCACCCTTGGTGGAAGTCA+TGG + chr7_1:937855-937874 Msa1003870:intron 55.0%
TTATACTCACGCCTGGCCTG+TGG - chr7_1:938064-938083 None:intergenic 55.0%
AAGTGGAGAGACACCTCCAC+TGG + chr7_1:939099-939118 Msa1003870:CDS 55.0%
ACCAGCGCCCTGATATGTTC+AGG + chr7_1:939139-939158 Msa1003870:CDS 55.0%
ACCTGAACATATCAGGGCGC+TGG - chr7_1:939143-939162 None:intergenic 55.0%
AAAGGCCGGTTACCATGGCA+AGG + chr7_1:939333-939352 Msa1003870:CDS 55.0%
ATTGGCCGCAGTGCAGGATT+TGG - chr7_1:939634-939653 None:intergenic 55.0%
TACCAGGTCGGGCAAAAGAG+AGG + chr7_1:939786-939805 Msa1003870:intron 55.0%
! TACCTCTCTTTTGCCCGACC+TGG - chr7_1:939791-939810 None:intergenic 55.0%
TGGGGGTTCCTGCTACACAA+TGG + chr7_1:939862-939881 Msa1003870:CDS 55.0%
CCGCATCCACTAATCGGATG+AGG - chr7_1:939990-940009 None:intergenic 55.0%
GTCGGTACCCGTATTGTACC+GGG - chr7_1:940112-940131 None:intergenic 55.0%
GGGTACACATACGGTACTCG+TGG - chr7_1:940399-940418 None:intergenic 55.0%
ACCGTATGTGTACCCGGTAC+GGG + chr7_1:940404-940423 Msa1003870:intron 55.0%
ACCCGTACCGGGTACACATA+CGG - chr7_1:940408-940427 None:intergenic 55.0%
! AGGTGGTTCGGACACGTGTT+TGG - chr7_1:940488-940507 None:intergenic 55.0%
TTAGCGCAGCATGTAGAGCG+AGG + chr7_1:940868-940887 Msa1003870:CDS 55.0%
TAGCGCAGCATGTAGAGCGA+GGG + chr7_1:940869-940888 Msa1003870:CDS 55.0%
GTAGAGCGAGGGATTGCAGA+CGG + chr7_1:940880-940899 Msa1003870:CDS 55.0%
TGTGGATCCTACAGACAGCC+GGG - chr7_1:941530-941549 None:intergenic 55.0%
GTGACTTCAATGGCCACTGC+TGG + chr7_1:941983-942002 Msa1003870:CDS 55.0%
GGATTCCCTCACTAGGGTAG+AGG - chr7_1:942897-942916 None:intergenic 55.0%
GCCCATAGCACAAGCAAGCA+AGG - chr7_1:943175-943194 None:intergenic 55.0%
TCGCGGATCGCGGAAAATAG+CGG - chr7_1:943269-943288 None:intergenic 55.0%
! CTATTTTCCGCGATCCGCGA+TGG + chr7_1:943269-943288 Msa1003870:three_prime_UTR 55.0%
ATGTTGTCCATCGCGGATCG+CGG - chr7_1:943279-943298 None:intergenic 55.0%
ACATCCACCACCCAAAGAGG+GGG - chr7_1:943449-943468 None:intergenic 55.0%
CACATCCACCACCCAAAGAG+GGG - chr7_1:943450-943469 None:intergenic 55.0%
CCACATCCACCACCCAAAGA+GGG - chr7_1:943451-943470 None:intergenic 55.0%
GGAGCAGGACGACGAAGTAC+TGG - chr7_1:936266-936285 None:intergenic 60.0%
GGGATGAGGTGCAACCCAAG+AGG - chr7_1:937153-937172 None:intergenic 60.0%
GTTGGTCGTCGAGTAACCGG+TGG + chr7_1:937502-937521 Msa1003870:CDS 60.0%
! TGGCACCGGGGCCATTAAGA+CGG - chr7_1:937534-937553 None:intergenic 60.0%
AGCATACCTCAGTGGCACCG+GGG - chr7_1:937546-937565 None:intergenic 60.0%
CAGCATACCTCAGTGGCACC+GGG - chr7_1:937547-937566 None:intergenic 60.0%
!! GGTGCCACTGAGGTATGCTG+AGG + chr7_1:937547-937566 Msa1003870:intron 60.0%
TGGCCACTGCTGGAAGTCGT+TGG + chr7_1:941993-942012 Msa1003870:CDS 60.0%
GGCCACTGCTGGAAGTCGTT+GGG + chr7_1:941994-942013 Msa1003870:CDS 60.0%
GCCACTGCTGGAAGTCGTTG+GGG + chr7_1:941995-942014 Msa1003870:CDS 60.0%
ACCCCAACGACTTCCAGCAG+TGG - chr7_1:941999-942018 None:intergenic 60.0%
TCGTCAGCAGGTCTTCGCCT+TGG - chr7_1:942997-943016 None:intergenic 60.0%
!! CCCTCTTTGGGTGGTGGATG+TGG + chr7_1:943448-943467 Msa1003870:three_prime_UTR 60.0%
GCCACATCCACCACCCAAAG+AGG - chr7_1:943452-943471 None:intergenic 60.0%
!! TAATGGCCCCGGTGCCACTG+AGG + chr7_1:937537-937556 Msa1003870:CDS 65.0%
TGCTCTCCGCACCCCCTCTT+TGG + chr7_1:943435-943454 Msa1003870:three_prime_UTR 65.0%
GCTCTCCGCACCCCCTCTTT+GGG + chr7_1:943436-943455 Msa1003870:three_prime_UTR 65.0%
CACCACCCAAAGAGGGGGTG+CGG - chr7_1:943444-943463 None:intergenic 65.0%
CTCCGCACCCCCTCTTTGGG+TGG + chr7_1:943439-943458 Msa1003870:three_prime_UTR 70.0%
CGCACCCCCTCTTTGGGTGG+TGG + chr7_1:943442-943461 Msa1003870:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 936015 943595 936015 ID=Msa1003870;Name=Msa1003870
chr7_1 mRNA 936015 943595 936015 ID=Msa1003870-mRNA-1;Parent=Msa1003870;Name=Msa1003870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=403|1|1|1|0.93|0.93|16|387|599
chr7_1 exon 936015 936501 936015 ID=Msa1003870-mRNA-1:exon:409;Parent=Msa1003870-mRNA-1
chr7_1 exon 937430 937558 937430 ID=Msa1003870-mRNA-1:exon:410;Parent=Msa1003870-mRNA-1
chr7_1 exon 937646 937719 937646 ID=Msa1003870-mRNA-1:exon:411;Parent=Msa1003870-mRNA-1
chr7_1 exon 937857 937926 937857 ID=Msa1003870-mRNA-1:exon:412;Parent=Msa1003870-mRNA-1
chr7_1 exon 938018 938073 938018 ID=Msa1003870-mRNA-1:exon:413;Parent=Msa1003870-mRNA-1
chr7_1 exon 938744 938815 938744 ID=Msa1003870-mRNA-1:exon:414;Parent=Msa1003870-mRNA-1
chr7_1 exon 938917 939011 938917 ID=Msa1003870-mRNA-1:exon:415;Parent=Msa1003870-mRNA-1
chr7_1 exon 939094 939160 939094 ID=Msa1003870-mRNA-1:exon:416;Parent=Msa1003870-mRNA-1
chr7_1 exon 939233 939362 939233 ID=Msa1003870-mRNA-1:exon:417;Parent=Msa1003870-mRNA-1
chr7_1 exon 939457 939675 939457 ID=Msa1003870-mRNA-1:exon:418;Parent=Msa1003870-mRNA-1
chr7_1 exon 939792 939922 939792 ID=Msa1003870-mRNA-1:exon:419;Parent=Msa1003870-mRNA-1
chr7_1 exon 940840 941014 940840 ID=Msa1003870-mRNA-1:exon:420;Parent=Msa1003870-mRNA-1
chr7_1 exon 941110 941200 941110 ID=Msa1003870-mRNA-1:exon:421;Parent=Msa1003870-mRNA-1
chr7_1 exon 941897 942054 941897 ID=Msa1003870-mRNA-1:exon:422;Parent=Msa1003870-mRNA-1
chr7_1 exon 942877 943065 942877 ID=Msa1003870-mRNA-1:exon:423;Parent=Msa1003870-mRNA-1
chr7_1 exon 943149 943595 943149 ID=Msa1003870-mRNA-1:exon:424;Parent=Msa1003870-mRNA-1
chr7_1 five_prime_UTR 936015 936417 936015 ID=Msa1003870-mRNA-1:five_prime_utr;Parent=Msa1003870-mRNA-1
chr7_1 CDS 936418 936501 936418 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 937430 937558 937430 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 937646 937719 937646 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 937857 937926 937857 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 938018 938073 938018 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 938744 938815 938744 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 938917 939011 938917 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 939094 939160 939094 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 939233 939362 939233 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 939457 939675 939457 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 939792 939922 939792 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 940840 941014 940840 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 941110 941200 941110 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 941897 942054 941897 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 942877 943065 942877 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 CDS 943149 943208 943149 ID=Msa1003870-mRNA-1:cds;Parent=Msa1003870-mRNA-1
chr7_1 three_prime_UTR 943209 943595 943209 ID=Msa1003870-mRNA-1:three_prime_utr;Parent=Msa1003870-mRNA-1
Gene Sequence

>Msa1003870

ATGGGTGATGAAAGTGGTGGTTTGAGTGCTAATAAAGGTGTTGCTCAAGAGGATGAGGGCAATACTACCCCTTTTCCTGAGAGGGTTCAAGTAGGAGGTTCGCCTATGTTCAAAGTGGAGAGGAAACTTGGCAAAGGTGGATTTGGACAGGTTTTTGTTGGTCGTCGAGTAACCGGTGGTAATGACCGTCTTAATGGCCCCGGTGCCACTGAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGAAGTCATGGAATACCTAAAGTACATTATAAAGGAAGACAAGGAGAATATTACGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATACCACAGGCCAGGCGATGTCTGCCGAAATGGTGGCATGCATTGCTGTGGAGTCATTGTCGATCTTGGAGAAGATGCACTCAAGGGGATATGTGCATGGGGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGATCTCGGATTAGCAACAAAGTGGAGAGACACCTCCACTGGTCAGCATGTTGAATATGACCAGCGCCCTGATATGTTCAGAGGAACTGTTCGATATGCAAGTGTTCATGCTCATTTGGGAAGGACTGCTAGCAGAAGAGATGATCTTGAATCTCTTGCATATACTCTCATTTTTCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGAGATAATAAGTCGTATCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGCTTCTGCCCTACTCCTTTCAGACATTTCCTTGAGTTTGTAGTGAACATGAAATTCGATGAAGAGCCTAACTATTCCAAGCTAATATCCTTGTTTGATAGTGTGCTTGGACCAAATCCTGCACTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTCGGGCAAAAGAGAGGTAGATTGAATATTGAGGAAGAAGATGATTCGCAGCCTAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATATCAATTTACAATGCAAGAATGCCAATGAAGCAAAGGTATCATTACAATGTAGCGGATGGACGATTAGCGCAGCATGTAGAGCGAGGGATTGCAGACGGCCTTCTTATTAGTTGTGTGGCTTCTTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGATTTACAAATCAAGTTTACAAGTTGTCACCTTTTTTCTTACACAAGGAATGGATCATGGAGCAATGGGAGAAGAACTATTACATTACTTCTATAGCTGGGGTTACTAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGCACACAGTATACACAACAATCATACAAAGTAAGCGAGTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCACGTGACTTCAATGGCCACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCACGGAATGCTGGATTCAGTGATCAGGTTGTTGAACTTGATTTCCTCTACCCTAGTGAGGGAATCCATAGACGATGGGATAATGGTTACAGGATCACAGCAACTGCAGCTACATGGGATCAATCTGCTCTTATATTAAGCAAACCAAGGCGAAGACCTGCTGACGAAACTCAGGAAACTCTTCGGACATCTCAATTTCCAAGCACGCATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGCTTGTGCTATGGGCGGACAGTATGTTGA
Protein sequence

>Msa1003870

MGDESGGLSANKGVAQEDEGNTTPFPERVQVGGSPMFKVERKLGKGGFGQVFVGRRVTGGNDRLNGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNTTGQAMSAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLATKWRDTSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSYLVCKKKMGTSPEMLCCFCPTPFRHFLEFVVNMKFDEEPNYSKLISLFDSVLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISIYNARMPMKQRYHYNVADGRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWEKNYYITSIAGVTNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSKPRRRPADETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC*